Citrus Sinensis ID: 017580

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MLLVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccHHHHHHHccHHHHHHHHHcHHHHHcccccccEEEEccHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHHHHHcccccEEEEEEcHccHHHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEHHHHHccccccccHHHccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEccHHccccHHHHHHHHHHHcHHHHHccccccccEEEEEEEccccccccEEcccccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MLLVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQnlfprksnpykrcvppitgikrpvcivtgatsGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAgilatssrltpegydqMMSTNYIGAFFLTKLLlpllknspvpsrivNVTSFTHRNVFnaqvnnetitgkfflrskcypcariyEYSKLCLLIFSYELHRnlgldksrhvsviaadpgvvktnimrevpSFLSLMAFTVLKLLGllqspekgiNSVLdaalappetsgvyffggkgrtvnssalSFNSKLAGELWTTSCNLFINSQLACRDLSN
Flexible Loop (DISEMBL)
MLLVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQnlfprksnpyKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFThrnvfnaqvnnetitgkffLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Low Complexity Region (SEG)
MLLVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVtgatsglgaaaayalsREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFltklllpllkNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Disordered region (IsUnstruct)
**LVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT****DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLAC*****
Disordered Region (DISOPRED)
*******LKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSN*******P*TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN**********
Disordered Region (DISEMBL)
MLLVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Disordered Region (DISPRO)
MLLVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLA******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	369	2.2.26 [Sep-21-2011]
Q8N5I4	330	Dehydrogenase/reductase S	yes	no	0.737	0.824	0.332	1e-29
A2RVM0	322	Short-chain dehydrogenase	no	no	0.672	0.770	0.339	2e-26
O74959	339	Uncharacterized oxidoredu	yes	no	0.753	0.820	0.267	9e-21
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.734	0.857	0.303	1e-20
Q8NBN7	331	Retinol dehydrogenase 13	no	no	0.796	0.888	0.284	3e-19
Q8BYK4	316	Retinol dehydrogenase 12	yes	no	0.739	0.863	0.304	4e-19
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.723	0.839	0.292	5e-19
Q91WL8	414	WW domain-containing oxid	no	no	0.655	0.584	0.313	6e-19
P59837	316	Retinol dehydrogenase 12	no	no	0.728	0.851	0.291	9e-19
Q8CEE7	334	Retinol dehydrogenase 13	no	no	0.823	0.910	0.284	3e-18

>sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2

 Score =  131 bits (329), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 32/304 (10%)

Query: 63  RP--VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           RP  V IVTG T G+G + A  L+R G HV++ G +     + ++ I     + ++E   
Sbjct: 41  RPDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLY 100

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIG 180
            DL+S  S+ +F    +   +       + +LINNAG++    R T +G+++    NY+G
Sbjct: 101 CDLASMTSIRQFVQKFKMKKI------PLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLG 154

Query: 181 AFFLTKLLLPLLKNSPVP---SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
            F LT LLL  LK S  P   +R+V V+S TH   + A++N + +       S CY    
Sbjct: 155 HFLLTNLLLDTLKESGSPGHSARVVTVSSATH---YVAELNMDDLQS-----SACYSPHA 206

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL 297
            Y  SKL L++F+Y L R L  + S HV+    DPGVV T++ + V     L      KL
Sbjct: 207 AYAQSKLALVLFTYHLQRLLAAEGS-HVTANVVDPGVVNTDVYKHVFWATRLAK----KL 261

Query: 298 LG--LLQSPEKGINSVLDAALAPPETSGV---YFFGGKGRTVNSSALSFNSKLAGELWTT 352
           LG  L ++P++G  + + AA+  PE  GV   Y +  K     S  +++N KL  +LW+ 
Sbjct: 262 LGWLLFKTPDEGAWTSIYAAVT-PELEGVGGHYLYNEK--ETKSLHVTYNQKLQQQLWSK 318

Query: 353 SCNL 356
           SC +
Sbjct: 319 SCEM 322

Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: .EC: -EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 136/268 (50%), Gaps = 20/268 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             IVTGA+SG+G   A  LS  G HVV+  R++   ++   DI  +   A+L+  ++DLS
Sbjct: 31  TAIVTGASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLS 90

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
           S QSV KF    +   L       + LLINNAGI+A    L+ +  +   +TN++G F L
Sbjct: 91  SMQSVRKFASEYKSTGL------PLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLL 144

Query: 185 TKLLLPLLKNSPVPS----RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
           TKLLL  +K++   S    RIVN++S  HR  +   V  + I  K       Y   R Y 
Sbjct: 145 TKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFDKINDK-----SSYSSMRAYG 199

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL 300
            SKLC ++ + EL + L  D   +++  +  PG + TN+ R    +L++    V K   +
Sbjct: 200 QSKLCNVLHANELTKQLKED-GVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVAKY--I 256

Query: 301 LQSPEKGINSVLDAALAP--PETSGVYF 326
           L+S  +G  +    AL P     SG YF
Sbjct: 257 LKSVPQGAATTCYVALNPQVAGVSGEYF 284

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1

 Score =  101 bits (251), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 40/318 (12%)

Query: 55  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 114
           +P +TG    V +VTG++ G+G   A  L+R+G  V L GR+     + M  I    + +
Sbjct: 37  IPDLTG---KVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHS 93

Query: 115 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 174
           ++   ++DL  F+SV +  +S             + +L+NNAGI+     LT +GY+  +
Sbjct: 94  KIRFLRLDLLDFESVYQAAESFIA------KEEKLHILVNNAGIMNPPFELTKDGYELQI 147

Query: 175 STNYIGAFFLTKLLLPLLKNS-----PVPSRIVNVTSFT-----HRNVFNAQVNNETITG 224
            TNY+  +  T+LLLP L+ +     P   RIV+V S       +  ++   +N   +  
Sbjct: 148 QTNYLSHYLFTELLLPTLRRTAEECRPGDVRIVHVASIAYLQAPYSGIYFPDLNLPHVLL 207

Query: 225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
             F R         Y  SK   +++S  L + L   +   +  ++  PGV++T + R  P
Sbjct: 208 GTFAR---------YGQSKYAQILYSIALAKRL---EKYGIYSVSLHPGVIRTELTRYSP 255

Query: 285 SF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP----PETSGVYFFGGKGRTVNSSAL 339
           +F L L+  +V +   LL  P +G  + L AA +P       +G YF     R +   A 
Sbjct: 256 TFALKLLEKSVFQY--LLLDPIRGAMTSLYAATSPEISKEHLNGAYFTAIAQRGILHRA- 312

Query: 340 SFNSKLAGELWTTSCNLF 357
             +     EL+  +  +F
Sbjct: 313 -HDDAFVEELYRYTHKIF 329

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  101 bits (251), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 145/300 (48%), Gaps = 29/300 (9%)

Query: 66  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 125
            IVTGA+SG+GA     L+  G HV++  R+     +    I      A+++A ++DLSS
Sbjct: 33  AIVTGASSGIGAETTRVLALRGAHVIMGVRNMVAAKDVKDTILKDIPSAKVDAIELDLSS 92

Query: 126 FQSVLKFKDSLQQWLLDSDMHSS---IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAF 182
             SV KF          S+ +SS   + +LINNAGI+A   +L+ +  +   +TN+IG F
Sbjct: 93  LDSVKKFA---------SEFNSSGRPLNILINNAGIMACPFKLSKDNIELQFATNHIGHF 143

Query: 183 FLTKLLLPLLKNSPVPS----RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
            LT LLL  +K +   S    RIVNV S  HR  +   +  + I  +       Y   R 
Sbjct: 144 LLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKINDQ-----SSYNNWRA 198

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL 298
           Y  SKL  ++ + +L ++L  D   +++  +  PG + TN+ R   +   L+   + KL 
Sbjct: 199 YGQSKLANVLHANQLTKHLKED-GVNITANSLHPGTIVTNLFRHNSAVNGLINV-IGKL- 255

Query: 299 GLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 356
            +L++ ++G  +    AL P     SG YF         ++    +  LA +LW  S NL
Sbjct: 256 -VLKNVQQGAATTCYVALHPQVKGVSGEYF--SDSNVYKTTPHGKDVDLAKKLWDFSINL 312

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2

 Score = 96.7 bits (239), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 146/323 (45%), Gaps = 29/323 (8%)

Query: 38  LLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS 97
           +L ++     + P K  +P  T       IVTGA +G+G   A  L+R G +++L  R  
Sbjct: 19  VLLKDYVTGGACPSKATIPGKT------VIVTGANTGIGKQTALELARRGGNIILACRDM 72

Query: 98  HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 157
                   DI     +  + A  +DL+S +S+ +F   +       +    + +LINNAG
Sbjct: 73  EKCEAAAKDIRGETLNHHVNARHLDLASLKSIREFAAKI------IEEEERVDILINNAG 126

Query: 158 ILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV 217
           ++      T +G++     N++G F LT LLL  LK S  PSRI+N++S  H       V
Sbjct: 127 VMRCPHWTTEDGFEMQFGVNHLGHFLLTNLLLDKLKAS-APSRIINLSSLAH-------V 178

Query: 218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 277
                      +++ Y     Y  SKL +++F+ EL R L   +   V+V A  PGV +T
Sbjct: 179 AGHIDFDDLNWQTRKYNTKAAYCQSKLAIVLFTKELSRRL---QGSGVTVNALHPGVART 235

Query: 278 NIMREVPSFLSLMAFTVLKLLG--LLQSPEKGI--NSVLDAALAPPETSGVYFFGGKGRT 333
            + R      S  + T L  +   L++SPE     ++ L  A    + SG YF G K + 
Sbjct: 236 ELGRHTGIHGSTFSSTTLGPIFWLLVKSPELAAQPSTYLAVAEELADVSGKYFDGLKQKA 295

Query: 334 VNSSALSFNSKLAGELWTTSCNL 356
               A   + ++A  LW  S  L
Sbjct: 296 PAPEA--EDEEVARRLWAESARL 316

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score = 95.9 bits (237), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 26/299 (8%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           I   V ++TGA +G+G   A  L+R G  V +  R         ++I +  K++++   +
Sbjct: 37  IPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRK 96

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIG 180
           +DLS  +S+  F +   ++L +      + +LINNAG++      T +G++     N++G
Sbjct: 97  LDLSDTKSIRAFAE---RFLAEEK---KLHILINNAGVMMCPYSKTTDGFETHFGVNHLG 150

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
            F LT LLL  LK S  P+R+VN++S  H      ++    + G+     K Y  A  Y 
Sbjct: 151 HFLLTYLLLERLKES-APARVVNLSSIAH---LIGKIRFHDLQGQ-----KRYCSAFAYG 201

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL 300
           +SKL  L+F+ EL + L   +   V+  A  PGVV + I R   S+L  + + +      
Sbjct: 202 HSKLANLLFTRELAKRL---QGTGVTAYAVHPGVVLSEITRN--SYLLCLLWRLFS--PF 254

Query: 301 LQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 357
            +S  +G  + L  ALA      SG YF   K   V+S A   N K A  LW  SC L 
Sbjct: 255 FKSTSQGAQTSLHCALAEDLEPLSGKYFSDCKRMWVSSRAR--NKKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score = 95.9 bits (237), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 140/297 (47%), Gaps = 30/297 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA +G+G   A  L++ G  V L  R          +I +   + ++   ++DLS
Sbjct: 43  VVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLS 102

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
             +S+  F        L  + H  + +LINNAG++      T +G++  +  N++G F L
Sbjct: 103 DTKSIRAFAKGF----LAEEKH--LHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLL 156

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
           T LLL  LK S  PSRIVNV+S  H      +++   + G+ F     Y     Y +SKL
Sbjct: 157 THLLLEKLKES-APSRIVNVSSLAHH---LGRIHFHNLQGEKF-----YNAGLAYCHSKL 207

Query: 245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 304
             ++F+ EL R L   K   V+  +  PG V++ ++R   SF+  M +        +++P
Sbjct: 208 ANILFTQELARRL---KGSGVTTYSVHPGTVQSELVRH-SSFMRWMWWL---FSFFIKTP 260

Query: 305 EKGINSVLDAALAPPETSGVYFFGGKG----RTVNSSALSFNSKLAGELWTTSCNLF 357
           ++G  + L  AL    T G+    G           SA + N  +A  LW  SC+L 
Sbjct: 261 QQGAQTSLHCAL----TEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLL 313

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score = 95.5 bits (236), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 138/271 (50%), Gaps = 29/271 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA SG+G   A + +  G HV+L  R+    SE ++ I      A++EA  +DL+
Sbjct: 126 VVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVSRILEEWHKAKVEAMTLDLA 185

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
             +SV  F ++ +        + S+ +L+ NAG  A    LT +G +     N++G F+L
Sbjct: 186 VLRSVQHFAEAFKA------KNVSLHVLVCNAGTFALPWGLTKDGLETTFQVNHLGHFYL 239

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFL------RSKCYPCARI 238
            +LL  +L  S  P+R++ V+S +HR      +N+   +GK  L      RS  Y     
Sbjct: 240 VQLLQDVLCRSS-PARVIVVSSESHRFT---DINDS--SGKLDLSRLSPPRSD-YWAMLA 292

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFLSLMAFTVLKL 297
           Y  SKLC ++FS ELHR L     R V+  A  PG ++ + I R   S++  + FT+ + 
Sbjct: 293 YNRSKLCNILFSNELHRRL---SPRGVTSNAVHPGNMMYSAIHRN--SWVYKLLFTLAR- 346

Query: 298 LGLLQSPEKGINSVLDAALAP--PETSGVYF 326
               +S ++G  + +  A+AP      G+YF
Sbjct: 347 -PFTKSMQQGAATTVYCAVAPELEGLGGMYF 376

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 26/295 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA +G+G   A  L+R G  V +  R         ++I +  K++++   ++DLS
Sbjct: 41  VVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLS 100

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
             +S+  F +              + +LINNAG++      T +G++  ++ N++G F L
Sbjct: 101 DTKSIRAFAEGFLA------EEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLL 154

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
           T LLL  LK S  P+R+VN++S  H      ++    + G      K Y     Y +SKL
Sbjct: 155 THLLLGRLKES-APARVVNLSSVAHH---LGKIRFHDLQG-----DKYYNLGFAYCHSKL 205

Query: 245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 304
             ++F+ EL + L   K   V+  A  PG+V++ ++R   SFL  + + +      L++ 
Sbjct: 206 ANVLFTRELAKRL---KGTGVTTYAVHPGIVRSKLVRH--SFLLCLLWRLFS--PFLKTT 258

Query: 305 EKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 357
            +G  + L  ALA      SG YF   K   V+  A   N+K A  LW  SC L 
Sbjct: 259 WEGAQTSLHCALAEGLEPLSGKYFSDCKKTWVSPRAR--NNKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 37/341 (10%)

Query: 25  LLWPVSLLTSHF--QLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYA 82
            L PVS++ +     +L ++     + P K  +P  T       IVTGA +G+G   A  
Sbjct: 4   FLLPVSVVGTVIGGTVLLKDYVAGGACPSKATIPGKT------VIVTGANTGIGKQTALE 57

Query: 83  LSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD 142
           L++ G +V+L  R          DI     + R+ A ++DL+S +S+ +F   + +    
Sbjct: 58  LAKRGGNVILACRDMEKCEVAAKDIRGETLNPRVRAERLDLASLKSIREFARKVIK---- 113

Query: 143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 202
                 + +L+NNA ++      T +G++     NY+G F LT LLL  LK S  PSRI+
Sbjct: 114 --EEERVDILVNNAAVMRCPHWTTEDGFEMQFGVNYLGHFLLTNLLLDKLKAS-APSRII 170

Query: 203 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS 262
           N++S  H       ++ E +  +     K Y     Y  SKL +++F+ EL   L   + 
Sbjct: 171 NLSSLAH---VAGHIDFEDLNWQM----KKYDTKAAYCQSKLAVVLFTKELSHRL---QG 220

Query: 263 RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-----LLQSPEKGI--NSVLDAA 315
             V+V A  PGV +T + R      S  AF+   +LG     L +SP+     ++ L  A
Sbjct: 221 SGVTVNALHPGVARTELGRHTGMHNS--AFSGF-MLGPFFWLLFKSPQLAAQPSTYLAVA 277

Query: 316 LAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 356
                 SG YF G + +  +  A   + ++A  LWT S  L
Sbjct: 278 EELENVSGKYFDGLREKAPSPEAE--DEEVARRLWTESARL 316

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
359476007	467	PREDICTED: dehydrogenase/reductase SDR f	0.970	0.766	0.719	1e-139
255540331	369	short-chain dehydrogenase, putative [Ric	0.975	0.975	0.692	1e-134
296081791	369	unnamed protein product [Vitis vinifera]	0.924	0.924	0.725	1e-133
224061535	349	predicted protein [Populus trichocarpa]	0.924	0.977	0.692	1e-129
186523242	364	Rossmann-fold NAD(P)-binding domain-cont	0.970	0.983	0.621	1e-123
42567629	359	Rossmann-fold NAD(P)-binding domain-cont	0.948	0.974	0.635	1e-121
297806381	357	short-chain dehydrogenase/reductase fami	0.943	0.974	0.629	1e-121
356516031	387	PREDICTED: dehydrogenase/reductase SDR f	0.962	0.917	0.624	1e-121
356509283	377	PREDICTED: dehydrogenase/reductase SDR f	0.962	0.941	0.639	1e-119
9755640	346	putative protein [Arabidopsis thaliana]	0.921	0.982	0.618	1e-115

>gi|359476007|ref|XP_002280887.2| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Vitis vinifera]

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/360 (71%), Positives = 299/360 (83%), Gaps = 2/360 (0%)

Query: 6   KELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNL-FPRKSNPYKRCVPPITGIKRP 64
           KEL+ V+HFV S++F RMAL W +SL+ S+  L  Q   F RKSN Y RC P  T   RP
Sbjct: 5   KELREVLHFVFSLQFLRMALFWTLSLIISYLHLFIQRFPFSRKSNSYPRCPPANTATFRP 64

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           +CI+TGATSGLG AAAYALS+EGF+VVLVGRSSHLLS+TM +I  +NK+A L+ FQVDLS
Sbjct: 65  LCIITGATSGLGKAAAYALSKEGFYVVLVGRSSHLLSKTMVEIKEKNKNAHLKGFQVDLS 124

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
           SF S+LKFK SL+QWL DS+MHSSIQLLINNAGILATS RLT EG DQMM+TNY+GAF L
Sbjct: 125 SFHSILKFKGSLEQWLADSNMHSSIQLLINNAGILATSCRLTTEGCDQMMATNYMGAFSL 184

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
           TKLLLPLL++SPVPSRIVNV+SFTH NVF+ QV+  TITGK F R K YPCA IYEYSKL
Sbjct: 185 TKLLLPLLRSSPVPSRIVNVSSFTHLNVFDMQVDEGTITGKCFSRPKQYPCAHIYEYSKL 244

Query: 245 CLLIFSYELHRNLG-LDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 303
           CLL+F+YELHR LG +  SRHVSVIA DPG V+TNIMREVPS +S MAF VLKLL LLQS
Sbjct: 245 CLLLFAYELHRQLGCMHNSRHVSVIAVDPGAVETNIMREVPSCISHMAFMVLKLLFLLQS 304

Query: 304 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLA 363
           PE G++S+LDAALAPPE SG+YFFGGKGRTV SSALS+N+KLA +LWTTSC+LF+   LA
Sbjct: 305 PENGVSSILDAALAPPEISGLYFFGGKGRTVKSSALSYNTKLAEKLWTTSCDLFLKLCLA 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540331|ref|XP_002511230.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223550345|gb|EEF51832.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/361 (69%), Positives = 301/361 (83%), Gaps = 1/361 (0%)

Query: 7   ELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVC 66
           ELK  +HF+ S+EFWRMA+ W +SL+ S+F+L FQN+F R S+PY  C PP +GI RP+C
Sbjct: 4   ELKETLHFIVSLEFWRMAIFWTISLIASYFELYFQNMFGRSSHPYPHCFPPTSGIARPLC 63

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGATSGLG AAAYALSREGF VVL GRSS LLS+T+  I  +N+DA+++AF+VDL+SF
Sbjct: 64  VITGATSGLGEAAAYALSREGFFVVLAGRSSKLLSKTVERINKQNRDAQVKAFEVDLTSF 123

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK 186
           QS++KFK SL++WLLDSDMHSSIQLLINNAGILATS RLT EGYD+MM TNY+G F LTK
Sbjct: 124 QSIIKFKGSLEKWLLDSDMHSSIQLLINNAGILATSQRLTTEGYDEMMVTNYVGLFSLTK 183

Query: 187 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCL 246
           LLLPLL+NSP+ SRIVNVTSFTHR+VFN QV+ ET++GK F   K YP A IYEYSKLC+
Sbjct: 184 LLLPLLRNSPIESRIVNVTSFTHRSVFNVQVDKETVSGKCFSTYKFYPYAHIYEYSKLCI 243

Query: 247 LIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPE 305
           L+FSYELHR L L D+S HVSV AADPGVVKTNIMREVP  LS +AF VLKLLGLLQ P+
Sbjct: 244 LLFSYELHRQLRLMDESCHVSVNAADPGVVKTNIMREVPFCLSSVAFIVLKLLGLLQLPD 303

Query: 306 KGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACR 365
            G++S+LDAALAPPETS VYFFGGKGR + SSALS +  LA +LWTTSC++F N +L  +
Sbjct: 304 NGVSSILDAALAPPETSAVYFFGGKGRILKSSALSRDISLAEKLWTTSCDIFENLKLNSK 363

Query: 366 D 366
           +
Sbjct: 364 E 364

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081791|emb|CBI20796.3| unnamed protein product [Vitis vinifera]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/343 (72%), Positives = 285/343 (83%), Gaps = 2/343 (0%)

Query: 23  MALLWPVSLLTSHFQLLFQNL-FPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAY 81
           MAL W +SL+ S+  L  Q   F RKSN Y RC P  T   RP+CI+TGATSGLG AAAY
Sbjct: 1   MALFWTLSLIISYLHLFIQRFPFSRKSNSYPRCPPANTATFRPLCIITGATSGLGKAAAY 60

Query: 82  ALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL 141
           ALS+EGF+VVLVGRSSHLLS+TM +I  +NK+A L+ FQVDLSSF S+LKFK SL+QWL 
Sbjct: 61  ALSKEGFYVVLVGRSSHLLSKTMVEIKEKNKNAHLKGFQVDLSSFHSILKFKGSLEQWLA 120

Query: 142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI 201
           DS+MHSSIQLLINNAGILATS RLT EG DQMM+TNY+GAF LTKLLLPLL++SPVPSRI
Sbjct: 121 DSNMHSSIQLLINNAGILATSCRLTTEGCDQMMATNYMGAFSLTKLLLPLLRSSPVPSRI 180

Query: 202 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG-LD 260
           VNV+SFTH NVF+ QV+  TITGK F R K YPCA IYEYSKLCLL+F+YELHR LG + 
Sbjct: 181 VNVSSFTHLNVFDMQVDEGTITGKCFSRPKQYPCAHIYEYSKLCLLLFAYELHRQLGCMH 240

Query: 261 KSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE 320
            SRHVSVIA DPG V+TNIMREVPS +S MAF VLKLL LLQSPE G++S+LDAALAPPE
Sbjct: 241 NSRHVSVIAVDPGAVETNIMREVPSCISHMAFMVLKLLFLLQSPENGVSSILDAALAPPE 300

Query: 321 TSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLA 363
            SG+YFFGGKGRTV SSALS+N+KLA +LWTTSC+LF+   LA
Sbjct: 301 ISGLYFFGGKGRTVKSSALSYNTKLAEKLWTTSCDLFLKLCLA 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061535|ref|XP_002300528.1| predicted protein [Populus trichocarpa] gi|222847786|gb|EEE85333.1| predicted protein [Populus trichocarpa]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/342 (69%), Positives = 283/342 (82%), Gaps = 1/342 (0%)

Query: 23  MALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYA 82
           M + W +SL+ S+FQL +Q +F +K N Y RC P   G K+P+C++TGATSG+GAAAAY 
Sbjct: 1   MGIFWTLSLVMSYFQLFWQRVFTKKPNAYPRCPPQRIGTKKPICVITGATSGIGAAAAYD 60

Query: 83  LSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD 142
           LS+EGF+VVLVGRSS LLS+ +  I  +NKDA +EAF+VDLSSFQS+LKFKDSL++WLLD
Sbjct: 61  LSKEGFYVVLVGRSSQLLSKMIEWIHKKNKDACVEAFEVDLSSFQSILKFKDSLEKWLLD 120

Query: 143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 202
           SDMH S+QLLINNAGILA S RLT EGYDQMM TNYIGAF LTKLLLPLLKNSP+ SRIV
Sbjct: 121 SDMHVSVQLLINNAGILAASHRLTEEGYDQMMGTNYIGAFSLTKLLLPLLKNSPIGSRIV 180

Query: 203 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL-GLDK 261
           NVTSFTHRN+FN Q++ ET+ GK   RSK YP + IYE+SKLCLL+FSYELHR L   D+
Sbjct: 181 NVTSFTHRNLFNVQIDKETVVGKCLSRSKQYPFSHIYEFSKLCLLMFSYELHRQLHSTDE 240

Query: 262 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPET 321
           S  VSVIAADPG V+TNIMRE+PS++S M F  L LLGLLQSPE+G +SV+DAALAPPE 
Sbjct: 241 SCKVSVIAADPGAVETNIMRELPSYISRMTFIALNLLGLLQSPEEGASSVIDAALAPPEI 300

Query: 322 SGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLA 363
           SGVYFFGGKGRT+NSSALS N +LA +LW +S +LF+ S+LA
Sbjct: 301 SGVYFFGGKGRTLNSSALSHNIRLAEKLWRSSSDLFLESKLA 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186523242|ref|NP_197098.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332004843|gb|AED92226.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/359 (62%), Positives = 285/359 (79%), Gaps = 1/359 (0%)

Query: 5   MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRP 64
           M+E+K V+ FVCS EFWRM L W ++L++S+FQLL   +F  KS      + P  G  RP
Sbjct: 1   MREVKEVLCFVCSSEFWRMVLFWNIALVSSYFQLLKARIFGSKSTSISGSINPQNGSSRP 60

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           +C++TGATSGLG A A+AL+ +GF+VVLVGRSS LLSET+ +I ++NKDA+L++F+ D+S
Sbjct: 61  ICVITGATSGLGKATAFALAEKGFYVVLVGRSSQLLSETLKEIKNKNKDAQLKSFEADMS 120

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
           SF+S+  FK+SL+QWL DS +H SIQ+L+NNAGILATSSR T +GYD+M++TNY+G FFL
Sbjct: 121 SFESIFTFKNSLEQWLSDSALHPSIQVLVNNAGILATSSRPTIDGYDRMIATNYVGPFFL 180

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
           TKLLLPLLKNS VPSR+VNVTSFTH + F  +++ +++TG  F  S  YPCARIYEYSKL
Sbjct: 181 TKLLLPLLKNSNVPSRVVNVTSFTHHSAFIQKLDKDSVTGVCFSTSNQYPCARIYEYSKL 240

Query: 245 CLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 303
           CLL+FSYELHR L L D S HVSVIAADPG VKTNIMRE+P +++ M F   K+LGLLQS
Sbjct: 241 CLLLFSYELHRQLRLIDDSSHVSVIAADPGFVKTNIMRELPCYITSMVFLGFKILGLLQS 300

Query: 304 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQL 362
           PE G  S++DAAL+ PETSG Y+FGGKGRT+ SS +S + KLA +LW TSC+LF + QL
Sbjct: 301 PEDGAESIIDAALSTPETSGAYYFGGKGRTIESSQVSRDPKLAKQLWETSCDLFNDLQL 359

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567629|ref|NP_196027.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|44681364|gb|AAS47622.1| At5g04070 [Arabidopsis thaliana] gi|45773892|gb|AAS76750.1| At5g04070 [Arabidopsis thaliana] gi|332003310|gb|AED90693.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/354 (63%), Positives = 283/354 (79%), Gaps = 4/354 (1%)

Query: 5   MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRP 64
           M+ LK  + F+CS  FWRM L W ++LL S+FQLL +++F  KS+    C         P
Sbjct: 1   MENLKEALRFICSSNFWRMVLFWNIALLFSYFQLLKKSIFAPKSSSSSSCSK-FNHSHTP 59

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           VC++TGATSGLG A A+ALSR+GF+VVLVGRSSHLLS+T++DI  +N+DA+L+AF+VD+S
Sbjct: 60  VCVITGATSGLGKATAFALSRKGFYVVLVGRSSHLLSKTLSDIKRQNEDAKLKAFEVDMS 119

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
           SFQ VLKF+ SL+QWL +SD+HSS+QLL+NNAGILATSSR T EG+D+M++TNY+GAF L
Sbjct: 120 SFQLVLKFRSSLEQWLFESDLHSSVQLLVNNAGILATSSRPTVEGFDRMIATNYVGAFSL 179

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
           TKLLLPLL+NSPVPSR+VNVTSFTHR+ F  + + +++TG  F RSK YPCARIYEYSKL
Sbjct: 180 TKLLLPLLRNSPVPSRVVNVTSFTHRSAFTGRFDMDSVTGVNFSRSKQYPCARIYEYSKL 239

Query: 245 CLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 303
           CLL+FSYELHR L L D S H+SV+A DPG VKTNIM E+PS++ ++AF  LK+LGL+QS
Sbjct: 240 CLLLFSYELHRQLHLMDDSHHISVVAVDPGAVKTNIMHELPSYIQVIAFCGLKILGLMQS 299

Query: 304 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 357
           PE    SV+DAALAPPE SG YFFG  GRT+ SS LS + K+A ELW TSC +F
Sbjct: 300 PEDAAESVIDAALAPPEISGKYFFG--GRTIESSTLSSDPKMAKELWDTSCLIF 351

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806381|ref|XP_002871074.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316911|gb|EFH47333.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/351 (62%), Positives = 282/351 (80%), Gaps = 3/351 (0%)

Query: 8   LKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCI 67
           +K  + F+CS  FWRMAL W ++LL S+FQLL +++    S               P+C+
Sbjct: 1   MKEALRFICSSNFWRMALFWNIALLFSYFQLLKKSI--FGSKSSSSSCSKSNHSHTPICV 58

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 127
           +TGATSGLG A A+ALSR+GF+VVLVGRSSHLLS+T++DI  +N++A+L+AF+VD+SSFQ
Sbjct: 59  ITGATSGLGKATAFALSRKGFYVVLVGRSSHLLSKTLSDIKRQNENAQLKAFEVDISSFQ 118

Query: 128 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKL 187
           SV KF++SL+QWL +SD+HSS+QLL+NNAGILATS R T EG+D+MM+TNY+GAF LTKL
Sbjct: 119 SVFKFRNSLEQWLFESDLHSSVQLLVNNAGILATSCRPTVEGFDRMMATNYVGAFTLTKL 178

Query: 188 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLL 247
           LLPLL+NSPVPSR+VNVTSFTHR+ F+ + + +++TG  F RSK YPCARIYEYSKLCLL
Sbjct: 179 LLPLLRNSPVPSRVVNVTSFTHRSAFSGRFDMDSVTGVNFSRSKQYPCARIYEYSKLCLL 238

Query: 248 IFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEK 306
           +FSY+LHR L L D S HVSV+A DPG VKTNIM E+PS++ ++AF  LK+LGL+QSPE 
Sbjct: 239 LFSYQLHRQLRLTDDSHHVSVVAVDPGAVKTNIMHELPSYIQVIAFYGLKILGLMQSPED 298

Query: 307 GINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 357
              SV+DAALAPPE SG YFFGG+GRT+ SSALS + K+A ELW TSC +F
Sbjct: 299 AAESVIDAALAPPEISGKYFFGGQGRTIESSALSGDPKMAKELWDTSCLIF 349

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516031|ref|XP_003526700.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Glycine max]

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/373 (62%), Positives = 280/373 (75%), Gaps = 18/373 (4%)

Query: 1   MLLVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLL---------FQNLFPRKSN-- 49
           ++ V+KEL     F+CS++FWRMALLW  S+L S++QL          F+ L P K +  
Sbjct: 3   LITVVKELWRAFFFLCSLQFWRMALLWTFSILYSYYQLFKDSLSHSQYFKPLIPEKCSLF 62

Query: 50  -----PYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM 104
                 Y RC  P T   RPVC++TGATSGLG AAAY LS+EG+ VVLVGRS  LLSET+
Sbjct: 63  SQKLVSYPRC-SPFTTTFRPVCVITGATSGLGLAAAYELSKEGYVVVLVGRSQQLLSETI 121

Query: 105 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 164
             I  RN+ A LEAFQVDLSS +SV+KFK SLQQW LDSD+H SIQ+LINNAGILATS R
Sbjct: 122 TKIKDRNEHAHLEAFQVDLSSIESVVKFKTSLQQWFLDSDLHCSIQILINNAGILATSPR 181

Query: 165 LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG 224
           +TPEGYDQM+ TNYIGAF LTKLLLPLL++SPV S+IVNVTSFTHR V + QV+  T++G
Sbjct: 182 VTPEGYDQMIGTNYIGAFALTKLLLPLLESSPVSSKIVNVTSFTHRAVTDVQVDEGTVSG 241

Query: 225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREV 283
           + F RS  YPCA IYEYSKLCL++FSYELHR L L  KS  + V  ADPGVV+TN+MRE+
Sbjct: 242 ERFFRSIQYPCAHIYEYSKLCLILFSYELHRQLCLMGKSHQIFVTVADPGVVQTNLMREI 301

Query: 284 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNS 343
           P+ LS +A  VLK L LLQSPE G++S++DAALAPP TSG YFFGG GRT+N S LS N+
Sbjct: 302 PAILSWLAIYVLKRLRLLQSPECGVDSIVDAALAPPGTSGAYFFGGNGRTINPSTLSRNA 361

Query: 344 KLAGELWTTSCNL 356
           KLA ELW ++  L
Sbjct: 362 KLARELWESTSKL 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509283|ref|XP_003523380.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Glycine max]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/363 (63%), Positives = 277/363 (76%), Gaps = 8/363 (2%)

Query: 1   MLLVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQ------NLFPRKSNPYKRC 54
           ++ V+KEL     F+CS +FWRMALLW  S+L S++QL         +LF  K   Y RC
Sbjct: 3   LIKVVKELWRAFFFLCSPQFWRMALLWTFSILYSYYQLFKPLIHEKCSLFSHKLVSYPRC 62

Query: 55  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 114
            P  T  K PVC++TGATSGLG AAAY LS+EG+ VVLVGRS  LLSET+  I   N+DA
Sbjct: 63  SPFTTTFK-PVCVITGATSGLGLAAAYQLSKEGYFVVLVGRSQQLLSETITKIKDWNEDA 121

Query: 115 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 174
            LEAFQVDLSS +SV+KFK SLQQWLLDSD+H SIQ+LINNAGILATS R+T EGYDQM+
Sbjct: 122 HLEAFQVDLSSIESVVKFKMSLQQWLLDSDLHCSIQILINNAGILATSPRVTAEGYDQMI 181

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 234
            TNYIGAF LTKLLLPLL++SPV S+IVNV+SFTHR V + QV+  T++GK F RS  YP
Sbjct: 182 GTNYIGAFALTKLLLPLLESSPVSSKIVNVSSFTHRAVTDVQVDEGTVSGKRFFRSIQYP 241

Query: 235 CARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT 293
           CA IYEYSKLCL++FSYELHR L L  KS  + V  ADPGVV+T +M+EVP+ LS +A  
Sbjct: 242 CAHIYEYSKLCLILFSYELHRQLCLMGKSHQIFVTVADPGVVQTKLMQEVPAILSWLALY 301

Query: 294 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTS 353
           VLK L LLQSPE G++S++DAALAPP TSG YFFGGKGRT+N S LS N+KLA ELW ++
Sbjct: 302 VLKRLQLLQSPECGVDSIIDAALAPPGTSGAYFFGGKGRTLNPSPLSRNAKLARELWEST 361

Query: 354 CNL 356
             L
Sbjct: 362 SKL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9755640|emb|CAC01793.1| putative protein [Arabidopsis thaliana]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/341 (61%), Positives = 270/341 (79%), Gaps = 1/341 (0%)

Query: 23  MALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYA 82
           M L W ++L++S+FQLL   +F  KS      + P  G  RP+C++TGATSGLG A A+A
Sbjct: 1   MVLFWNIALVSSYFQLLKARIFGSKSTSISGSINPQNGSSRPICVITGATSGLGKATAFA 60

Query: 83  LSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD 142
           L+ +GF+VVLVGRSS LLSET+ +I ++NKDA+L++F+ D+SSF+S+  FK+SL+QWL D
Sbjct: 61  LAEKGFYVVLVGRSSQLLSETLKEIKNKNKDAQLKSFEADMSSFESIFTFKNSLEQWLSD 120

Query: 143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 202
           S +H SIQ+L+NNAGILATSSR T +GYD+M++TNY+G FFLTKLLLPLLKNS VPSR+V
Sbjct: 121 SALHPSIQVLVNNAGILATSSRPTIDGYDRMIATNYVGPFFLTKLLLPLLKNSNVPSRVV 180

Query: 203 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DK 261
           NVTSFTH + F  +++ +++TG  F  S  YPCARIYEYSKLCLL+FSYELHR L L D 
Sbjct: 181 NVTSFTHHSAFIQKLDKDSVTGVCFSTSNQYPCARIYEYSKLCLLLFSYELHRQLRLIDD 240

Query: 262 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPET 321
           S HVSVIAADPG VKTNIMRE+P +++ M F   K+LGLLQSPE G  S++DAAL+ PET
Sbjct: 241 SSHVSVIAADPGFVKTNIMRELPCYITSMVFLGFKILGLLQSPEDGAESIIDAALSTPET 300

Query: 322 SGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQL 362
           SG Y+FGGKGRT+ SS +S + KLA +LW TSC+LF + QL
Sbjct: 301 SGAYYFGGKGRTIESSQVSRDPKLAKQLWETSCDLFNDLQL 341

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
TAIR|locus:2150680	359	AT5G04070 [Arabidopsis thalian	0.948	0.974	0.573	1.9e-106
TAIR|locus:2146127	364	AT5G15940 [Arabidopsis thalian	0.970	0.983	0.559	3.1e-106
UNIPROTKB|Q8N5I4	330	DHRSX "Dehydrogenase/reductase	0.737	0.824	0.289	2.2e-25
UNIPROTKB|O53726	311	Rv0439c "PROBABLE DEHYDROGENAS	0.674	0.800	0.330	8.7e-24
UNIPROTKB|E1BYJ6	266	DHRSX "Uncharacterized protein	0.674	0.936	0.289	2.6e-22
UNIPROTKB|F1Q0B4	268	DHRSX "Uncharacterized protein	0.669	0.921	0.28	2.6e-22
FB|FBgn0033205	330	CG2064 [Drosophila melanogaste	0.669	0.748	0.32	3.4e-22
UNIPROTKB|O53613	303	Rv0068 "PROBABLE OXIDOREDUCTAS	0.669	0.815	0.323	9e-22
UNIPROTKB|F1P604	329	DHRS13 "Uncharacterized protei	0.761	0.854	0.299	3e-21
ZFIN|ZDB-GENE-060620-2	324	dhrsx "dehydrogenase/reductase	0.674	0.768	0.285	3.9e-21

TAIR|locus:2150680 AT5G04070 [Arabidopsis thaliana (taxid:3702)]

 Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
 Identities = 203/354 (57%), Positives = 259/354 (73%)

Query:     5 MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRP 64
             M+ LK  + F+CS  FWRM L W ++LL S+FQLL +++F  KS+    C         P
Sbjct:     1 MENLKEALRFICSSNFWRMVLFWNIALLFSYFQLLKKSIFAPKSSSSSSC-SKFNHSHTP 59

Query:    65 VCIVXXXXXXXXXXXXXXXXREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             VC++                R+GF+VVLVGRSSHLLS+T++DI  +N+DA+L+AF+VD+S
Sbjct:    60 VCVITGATSGLGKATAFALSRKGFYVVLVGRSSHLLSKTLSDIKRQNEDAKLKAFEVDMS 119

Query:   125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFX 184
             SFQ VLKF+ SL+QWL +SD+HSS+QLL+NNAGILATSSR T EG+D+M++TNY+GAF  
Sbjct:   120 SFQLVLKFRSSLEQWLFESDLHSSVQLLVNNAGILATSSRPTVEGFDRMIATNYVGAFSL 179

Query:   185 XXXXXXXXXNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
                      NSPVPSR+VNVTSFTHR+ F  + + +++TG  F RSK YPCARIYEYSKL
Sbjct:   180 TKLLLPLLRNSPVPSRVVNVTSFTHRSAFTGRFDMDSVTGVNFSRSKQYPCARIYEYSKL 239

Query:   245 CLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 303
             CLL+FSYELHR L L D S H+SV+A DPG VKTNIM E+PS++ ++AF  LK+LGL+QS
Sbjct:   240 CLLLFSYELHRQLHLMDDSHHISVVAVDPGAVKTNIMHELPSYIQVIAFCGLKILGLMQS 299

Query:   304 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 357
             PE    SV+DAALAPPE SG YFFGG  RT+ SS LS + K+A ELW TSC +F
Sbjct:   300 PEDAAESVIDAALAPPEISGKYFFGG--RTIESSTLSSDPKMAKELWDTSCLIF 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2146127 AT5G15940 [Arabidopsis thaliana (taxid:3702)]

 Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
 Identities = 201/359 (55%), Positives = 261/359 (72%)

Query:     5 MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRP 64
             M+E+K V+ FVCS EFWRM L W ++L++S+FQLL   +F  KS      + P  G  RP
Sbjct:     1 MREVKEVLCFVCSSEFWRMVLFWNIALVSSYFQLLKARIFGSKSTSISGSINPQNGSSRP 60

Query:    65 VCIVXXXXXXXXXXXXXXXXREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +C++                 +GF+VVLVGRSS LLSET+ +I ++NKDA+L++F+ D+S
Sbjct:    61 ICVITGATSGLGKATAFALAEKGFYVVLVGRSSQLLSETLKEIKNKNKDAQLKSFEADMS 120

Query:   125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFX 184
             SF+S+  FK+SL+QWL DS +H SIQ+L+NNAGILATSSR T +GYD+M++TNY+G FF 
Sbjct:   121 SFESIFTFKNSLEQWLSDSALHPSIQVLVNNAGILATSSRPTIDGYDRMIATNYVGPFFL 180

Query:   185 XXXXXXXXXNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
                      NS VPSR+VNVTSFTH + F  +++ +++TG  F  S  YPCARIYEYSKL
Sbjct:   181 TKLLLPLLKNSNVPSRVVNVTSFTHHSAFIQKLDKDSVTGVCFSTSNQYPCARIYEYSKL 240

Query:   245 CLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 303
             CLL+FSYELHR L L D S HVSVIAADPG VKTNIMRE+P +++ M F   K+LGLLQS
Sbjct:   241 CLLLFSYELHRQLRLIDDSSHVSVIAADPGFVKTNIMRELPCYITSMVFLGFKILGLLQS 300

Query:   304 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQL 362
             PE G  S++DAAL+ PETSG Y+FGGKGRT+ SS +S + KLA +LW TSC+LF + QL
Sbjct:   301 PEDGAESIIDAALSTPETSGAYYFGGKGRTIESSQVSRDPKLAKQLWETSCDLFNDLQL 359

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|Q8N5I4 DHRSX "Dehydrogenase/reductase SDR family member on chromosome X" [Homo sapiens (taxid:9606)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 88/304 (28%), Positives = 146/304 (48%)

Query:    63 RP--VCIVXXXXXXXXXXXXXXXXREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
             RP  V IV                R G HV++ G +     + ++ I     + ++E   
Sbjct:    41 RPDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLY 100

Query:   121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIG 180
              DL+S  S+ +F   +Q++ +       + +LINNAG++    R T +G+++    NY+G
Sbjct:   101 CDLASMTSIRQF---VQKFKMKK---IPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLG 154

Query:   181 AFFXXXXXXXXXXNSPVP---SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
              F            S  P   +R+V V+S TH   + A++N + +       S CY    
Sbjct:   155 HFLLTNLLLDTLKESGSPGHSARVVTVSSATH---YVAELNMDDLQS-----SACYSPHA 206

Query:   238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL 297
              Y  SKL L++F+Y L R L  + S HV+    DPGVV T++ + V  + + +A    KL
Sbjct:   207 AYAQSKLALVLFTYHLQRLLAAEGS-HVTANVVDPGVVNTDVYKHV-FWATRLA---KKL 261

Query:   298 LG--LLQSPEKGINSVLDAALAPPETSGV---YFFGGKGRTVNSSALSFNSKLAGELWTT 352
             LG  L ++P++G  + + AA+ P E  GV   Y +  K     S  +++N KL  +LW+ 
Sbjct:   262 LGWLLFKTPDEGAWTSIYAAVTP-ELEGVGGHYLYNEK--ETKSLHVTYNQKLQQQLWSK 318

Query:   353 SCNL 356
             SC +
Sbjct:   319 SCEM 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|O53726 Rv0439c "PROBABLE DEHYDROGENASE/REDUCTASE" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 91/275 (33%), Positives = 131/275 (47%)

Query:    87 GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH 146
             G HVVL  R+    +   A I +    A +   Q+DL S  SV    D+L+        +
Sbjct:    45 GAHVVLAVRNLEKGNAARARIMAARPGAHVTLQQLDLCSLDSVRAAADALRT------AY 98

Query:   147 SSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP-SRIVNVT 205
               I +LINNAG++ T  ++T +G++    TN++G F             PVP SR+V V+
Sbjct:    99 PRIDVLINNAGVMWTPKQVTKDGFELQFGTNHLGHFALTGLVLDHML--PVPGSRVVTVS 156

Query:   206 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV 265
             S  HR   +A ++ + +  +     + Y     Y  +KL  L+F+YEL R LG +  +  
Sbjct:   157 SQGHR--IHAAIHFDDLQWE-----RRYNRVAAYGQAKLANLLFTYELQRRLG-EAGKST 208

Query:   266 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVY 325
               +AA PG   T + R +P  +  +A TVL  L L QSPE G    L AA  P    G Y
Sbjct:   209 IAVAAHPGGSNTELTRNLPRLIRPVA-TVLGPL-LFQSPEMGALPTLRAATDPTTQGGQY 266

Query:   326 F----FG---GKGRTVNSSALSFNSKLAGELWTTS 353
             +    FG   G  + V SSA S +  L   LWT S
Sbjct:   267 YGPDGFGEQRGHPKVVQSSAQSHDKDLQRRLWTVS 301

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|E1BYJ6 DHRSX "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 79/273 (28%), Positives = 133/273 (48%)

Query:    89 HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS 148
             HV++ G S     E +  I       ++E    DL+S +S+ +F   +QQ+   +     
Sbjct:     2 HVIIAGNSEREGQEAVRKIKEETLTGKVEFLYCDLASMKSIRQF---VQQFRAKN---CP 55

Query:   149 IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPS---RIVNVT 205
             + +L+NNAG++    R T +G++     NY+G F            S   S   RIV V+
Sbjct:    56 LHVLVNNAGVMLVPERQTEDGFEVHFGLNYLGHFLLTNLLLDTLKQSGTHSHSARIVTVS 115

Query:   206 SFTHRNVFNAQVNNETITGKFFLRSKC-YPCARIYEYSKLCLLIFSYELHRNLGLDKSRH 264
             S TH  V    +++        L+S+C Y     Y  SKL L++F+Y L   L  + S H
Sbjct:   116 SATHY-VGKLHLDD--------LQSRCSYSPHGAYAQSKLALVLFTYRLQHLLTANGS-H 165

Query:   265 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSG 323
             V+    DPGVV T + + V  F  +  F  +    L ++PE+G ++ + AA++P  E +G
Sbjct:   166 VTANVVDPGVVNTELYKHV--FWVVKVFKWMTAWLLFKTPEEGASTTIYAAVSPEIEGAG 223

Query:   324 VYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 356
               +   + RT  S+ ++++ +L   LWT SC +
Sbjct:   224 GCYLYNEERT-KSADVAYDEELQRRLWTESCKM 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1Q0B4 DHRSX "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 77/275 (28%), Positives = 130/275 (47%)

Query:    89 HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS 148
             HV+L G +     + +  I     + ++E    DL+S +S+ +F    ++  +   +H  
Sbjct:     2 HVILAGNNDSSAPDVVRKIQEETLNDKVEFLYCDLASLRSIRQFVQKFKKKKIP--LH-- 57

Query:   149 IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP---SRIVNVT 205
               +L+NNAG++    R T +G+++    NY+G F            S  P   +R+V V+
Sbjct:    58 --VLVNNAGVMMVPERTTEDGFEEHFGLNYLGHFLLTNLLLDTLKESGAPGRCARVVTVS 115

Query:   206 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV 265
             S TH   +  +++ + + G     S+CY     Y  SKL L++F+Y L R L    S  V
Sbjct:   116 SATH---YIGELDMDDLQG-----SRCYSPHAAYAQSKLALVLFTYHLQRLLAAQGSP-V 166

Query:   266 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG--LLQSPEKGINSVLDAALAPP--ET 321
             +    DPGVV TN+ R V  F       + KL G    ++P++G  + + AA+ P     
Sbjct:   167 TANVVDPGVVNTNLYRHV--FWGTRL--IKKLFGWWFFKTPDEGAWTSVYAAVTPDLEGL 222

Query:   322 SGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 356
              G Y +  K     S A++++  L  ELW  SC +
Sbjct:   223 GGRYLYNEK--ETKSLAVTYDLDLQTELWARSCQM 255

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0033205 CG2064 [Drosophila melanogaster (taxid:7227)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 88/275 (32%), Positives = 130/275 (47%)

Query:    85 REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD 144
             R G  V L  R  +   +   DI     +  + + ++DLSS  S+ KF D  ++      
Sbjct:    65 RRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKK------ 118

Query:   145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPSRIVNV 204
                 + +LINNAG++     LT +GY+  +  N+IG F           NS  PSRIV V
Sbjct:   119 EQPKLHVLINNAGVMRCPKTLTKDGYELQLGVNHIGHFLLTNLLLDVLKNS-APSRIVVV 177

Query:   205 TSFTH-RNVFN-AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS 262
             +S  H R   N A +N+E          K Y     Y  SKL  ++F+ EL + L   + 
Sbjct:   178 SSLAHARGSINVADLNSE----------KSYDEGLAYSQSKLANVLFTRELAKRL---EG 224

Query:   263 RHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLKLLG-LLQSPEKGINSVLDAALAPP- 319
               V+V A  PGVV T + R    F  +L+ F +  ++  LL++P+ G  + + AAL P  
Sbjct:   225 SGVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAALDPEL 284

Query:   320 -ETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTS 353
                SG+YF   K + V S AL  + K+A  LW  S
Sbjct:   285 KNISGLYFSDCKPKPVASGAL--DDKVAKFLWAES 317

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|O53613 Rv0068 "PROBABLE OXIDOREDUCTASE" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 89/275 (32%), Positives = 129/275 (46%)

Query:    87 GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH 146
             G HVVL  R+     +  A IT     A +E  ++DL+S  SV   + +  Q  L SD H
Sbjct:    38 GAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASV---RAAAAQ--LKSD-H 91

Query:   147 SSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP-SRIVNVT 205
               I LLINNAG++ T  + T +G++    TN++G F             PV  SR+V ++
Sbjct:    92 QRIDLLINNAGVMYTPRQTTADGFEMQFGTNHLGHFALTGLLIDRLL--PVAGSRVVTIS 149

Query:   206 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV 265
             S  HR    A ++ + +  +     + Y     Y  +KL  L+F+YEL R L    +   
Sbjct:   150 SVGHR--IRAAIHFDDLQWE-----RRYRRVAAYGQAKLANLLFTYELQRRLAPGGT--T 200

Query:   266 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVY 325
               +A+ PGV  T ++R +P    L+A   + L  L+Q  E G    L AA  P    G Y
Sbjct:   201 IAVASHPGVSNTEVVRNMPR--PLVAVAAI-LAPLMQDAELGALPTLRAATDPAVRGGQY 257

Query:   326 F----FG---GKGRTVNSSALSFNSKLAGELWTTS 353
             F    FG   G  + V SSA S + +L   LW  S
Sbjct:   258 FGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVS 292

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|F1P604 DHRS13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 92/307 (29%), Positives = 135/307 (43%)

Query:    52 KRCVPPITGIKRPVCIVXXXXXXXXXXXXXXXXREGFHVVLVGRSSHLLSETMADITSRN 111
             ++C   +TG      +V                R G  V+L  R+     + +A+I   +
Sbjct:    40 RQCSTDLTG---KTAVVTGANSGIGKAVCQELARRGARVILACRNWERGQKALAEIQVAS 96

Query:   112 KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD 171
             K   L   QVDLSS  S+  F     +WLL    +  I LL+NNA I      LTPEG D
Sbjct:    97 KGTCLLLGQVDLSSMASIRSFA----RWLLQE--YPEIHLLVNNAAISGFPKTLTPEGLD 150

Query:   172 QMMSTNYIGAFFXXXXXXXXXXNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 231
                +TNY+G F            +   +R+VNV+SF H + +   V+ + +TG      K
Sbjct:   151 LTFATNYVGPFLLTNLLQGALQRAG-SARVVNVSSFRHAHGY---VDEKHLTGA----GK 202

Query:   232 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA 291
                  + Y+ SKL L  F+ EL R L   +   V+V + DPGVV T IM+  P +L    
Sbjct:   203 PLNLIQSYDCSKLLLTSFTGELARRL---QGTGVTVNSVDPGVVYTEIMKPYP-WLYRFL 258

Query:   292 FTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSFNSKLAGEL 349
             F +       +  ++G   VL  +LA      SG YF      T+ + A   + ++A  L
Sbjct:   259 FWLFSFF--CKDVKQGAIPVLYLSLAKELDGVSGKYFSSSCMITLPTEAAQ-DPQVAQSL 315

Query:   350 WTTSCNL 356
             W  S  L
Sbjct:   316 WNASVQL 322

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-060620-2 dhrsx "dehydrogenase/reductase (SDR family) X-linked" [Danio rerio (taxid:7955)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 78/273 (28%), Positives = 127/273 (46%)

Query:    89 HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS 148
             HV++ G         +  I       ++E   +DL+S  SV +F   +Q++   +     
Sbjct:    67 HVIIAGNEEEEGLAAVKKIQEELNQGKVEFMYLDLASLTSVRQF---VQRY---NAKGLP 120

Query:   149 IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP---SRIVNVT 205
             + +L+NNAG++    R T +G++     NY+G F            +  P   SRIV ++
Sbjct:   121 LHVLVNNAGVMLVPERRTEDGFELHFGLNYLGHFLLTNLLLGALRKTGKPGKCSRIVIMS 180

Query:   206 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV 265
             S TH   +  ++  + + G+      CY     Y  SKL LL+ SY L   L L +   V
Sbjct:   181 SATH---YGGRLTLDDLQGRL-----CYSSHAAYAQSKLALLLLSYHLQEQL-LVRGDPV 231

Query:   266 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSG 323
             +V A DPG+V T +   + S   +      KLL   ++P +G ++ + AA A       G
Sbjct:   232 TVNAVDPGMVDTALYDNLCSPAQVAKKPFAKLL--FRTPAEGASTAIYAAAASELEGIGG 289

Query:   324 VYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 356
             +Y + G  R   SSALS++ +L  +LW  SC L
Sbjct:   290 LYLYNG--RKTESSALSYDKRLQTKLWKQSCAL 320

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	369
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-62
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	6e-47
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-35
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	7e-34
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	4e-30
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	8e-28
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	4e-26
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	1e-25
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-25
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	3e-25
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-22
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	4e-22
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-21
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	3e-21
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	5e-21
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	9e-21
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	5e-20
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-20
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-19
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	3e-19
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-19
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	6e-19
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	9e-19
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-18
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-18
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	5e-18
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	5e-18
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	5e-18
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	8e-18
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-17
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-17
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	3e-17
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	3e-17
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	5e-17
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	9e-17
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-16
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-16
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	4e-16
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	1e-15
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	1e-15
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-15
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-15
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-15
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-15
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-15
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	3e-15
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	7e-15
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	8e-15
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-14
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	3e-14
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-14
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-14
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	6e-14
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	7e-14
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	1e-13
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-13
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-13
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-13
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	3e-13
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	7e-13
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	7e-13
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-13
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	9e-13
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-12
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-12
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-12
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-12
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-12
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-12
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-12
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-12
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	6e-12
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	7e-12
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	7e-12
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	8e-12
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-11
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-11
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-11
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-11
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-11
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-11
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-11
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	2e-11
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-11
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	2e-11
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	4e-11
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	5e-11
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	6e-11
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	7e-11
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	8e-11
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	8e-11
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-10
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-10
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-10
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-10
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-10
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-10
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-10
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	4e-10
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	4e-10
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-10
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-10
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	5e-10
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	6e-10
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-10
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	6e-10
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-09
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-09
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-09
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-09
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-09
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-09
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-09
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-09
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	4e-09
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	4e-09
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	5e-09
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	6e-09
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	7e-09
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	7e-09
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	8e-09
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	9e-09
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-08
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-08
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-08
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	3e-08
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-08
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	4e-08
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	4e-08
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	4e-08
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	5e-08
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	6e-08
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	7e-08
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	7e-08
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-08
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	7e-08
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	8e-08
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	8e-08
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	8e-08
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-07
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-07
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-07
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-07
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-07
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-07
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-07
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-07
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-07
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-07
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	3e-07
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-07
pfam08659	181	pfam08659, KR, KR domain	4e-07
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-07
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	4e-07
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	5e-07
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	5e-07
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	5e-07
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	6e-07
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	6e-07
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	6e-07
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-07
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-06
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-06
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-06
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-06
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-06
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-06
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-06
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	4e-06
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-06
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	6e-06
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	7e-06
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	7e-06
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	8e-06
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	8e-06
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	9e-06
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-05
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-05
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-05
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-05
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-05
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-05
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-05
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-05
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	2e-05
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	3e-05
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	4e-05
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	4e-05
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	5e-05
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-05
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	8e-05
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	8e-05
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	9e-05
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-04
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-04
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-04
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-04
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-04
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-04
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	3e-04
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	4e-04
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	5e-04
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	6e-04
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	6e-04
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	7e-04
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	7e-04
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	0.001
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.001
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	0.001
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	0.001
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	0.003
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	0.003
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	0.003
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	0.003
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	0.004
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  199 bits (508), Expect = 7e-62
 Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 23/288 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA SG+G   A  L++ G HV++  R+     E  A+I     +A++E  Q+DLS
Sbjct: 3   VVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLS 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
           S  SV +F +              + +LINNAGI+A   RLT +G++   + NY+G F L
Sbjct: 63  SLASVRQFAEEFL------ARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLL 116

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
           T LLLP+LK S  PSRIVNV+S  HR                   +K Y   + Y  SKL
Sbjct: 117 TNLLLPVLKASA-PSRIVNVSSIAHR------AGPIDFNDLDLENNKEYSPYKAYGQSKL 169

Query: 245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 304
             ++F+ EL R L   +   V+V A  PGVV+T ++R   SF   + + +L+   L +SP
Sbjct: 170 ANILFTRELARRL---EGTGVTVNALHPGVVRTELLRRNGSF--FLLYKLLRPF-LKKSP 223

Query: 305 EKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELW 350
           E+G  + L AA +P     SG YF     +   SS+ + + +LA +LW
Sbjct: 224 EQGAQTALYAATSPELEGVSGKYF--SDCKIKMSSSEALDEELAEKLW 269

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  161 bits (410), Expect = 6e-47
 Identities = 114/307 (37%), Positives = 154/307 (50%), Gaps = 29/307 (9%)

Query: 55  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 114
           +P  +G  R V +VTGA +GLG   A AL+ +G HVVL  R+        A IT+    A
Sbjct: 11  IPDQSG--R-VAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGA 67

Query: 115 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 174
            +   ++DL+S  SV    D+L+        +  I LLINNAG++ T  + T +G++   
Sbjct: 68  DVTLQELDLTSLASVRAAADALR------AAYPRIDLLINNAGVMYTPKQTTADGFELQF 121

Query: 175 STNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 233
            TN++G F LT LLL  L   PVP SR+V V+S  HR    A ++ + +  +   R   Y
Sbjct: 122 GTNHLGHFALTGLLLDRLL--PVPGSRVVTVSSGGHR--IRAAIHFDDLQWE---RR--Y 172

Query: 234 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT 293
                Y  SKL  L+F+YEL R L    +  ++V AA PGV  T + R +P  L     T
Sbjct: 173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAV-AAHPGVSNTELARNLPRAL-RPVAT 230

Query: 294 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYF----FG---GKGRTVNSSALSFNSKLA 346
           VL  L L QSPE G    L AA  P    G Y+    FG   G  + V SSA S +  L 
Sbjct: 231 VLAPL-LAQSPEMGALPTLRAATDPAVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQ 289

Query: 347 GELWTTS 353
             LW  S
Sbjct: 290 RRLWAVS 296

Length = 306

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  127 bits (322), Expect = 7e-35
 Identities = 70/266 (26%), Positives = 105/266 (39%), Gaps = 47/266 (17%)

Query: 66  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 125
            +VTGA+SG+G A A  L+REG  VVL  R+   L+E  A            A Q D+S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA---IEALGGNAVAVQADVSD 57

Query: 126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFF 183
            + V    +         +    + +L+NNAGI        LT E +D+++  N  G F 
Sbjct: 58  EEDVEALVEEAL------EEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFL 111

Query: 184 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG----KFFLRSKCYPCARIY 239
           LT+  LP +K      RIVN++S                      K  L           
Sbjct: 112 LTRAALPHMKKQG-GGRIVNISSVA------GLRPLPGQAAYAASKAALEG--------- 155

Query: 240 EYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL 298
                        L R+L L+     + V A  PG+V T ++ ++    +         L
Sbjct: 156 -------------LTRSLALELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPL 202

Query: 299 GLLQSPEKGINSVLDAALAPPETSGV 324
           G L +PE+   +V+   LA  E S +
Sbjct: 203 GRLGTPEEVAEAVV--FLASDEASYI 226

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  126 bits (317), Expect = 7e-34
 Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 29/295 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             I+TGA +G+G   A  L+R G  V++  R      E  A+I     +  +    +DL+
Sbjct: 3   TVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLA 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
           S +S+  F     ++L + D    + +LINNAG++      T +G++     N++G F L
Sbjct: 63  SLKSIRAF---AAEFLAEED---RLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLL 116

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHR--NVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
           T LLL LLK S  PSRIVNV+S  H+   +    +N+E          K Y     Y  S
Sbjct: 117 TNLLLDLLKKS-APSRIVNVSSLAHKAGKINFDDLNSE----------KSYNTGFAYCQS 165

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLMAFTVLKLLGL 300
           KL  ++F+ EL R L   +   V+V A  PGVV+T + R               L     
Sbjct: 166 KLANVLFTRELARRL---QGTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWP-F 221

Query: 301 LQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTS 353
           +++P +G  + +  ALA      SG YF   K +     A+  + + A  LW  S
Sbjct: 222 VKTPREGAQTSIYLALAEELEGVSGKYFSDCKLKEPAPEAM--DEETARRLWEIS 274

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  116 bits (293), Expect = 4e-30
 Identities = 98/328 (29%), Positives = 142/328 (43%), Gaps = 62/328 (18%)

Query: 67  IVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 125
           ++TGA+SGLG AAA AL+R G +HVV+  R   L +E  A      KD        DL+S
Sbjct: 5   VITGASSGLGLAAAKALARRGEWHVVMACRDF-LKAEQAAQEVGMPKD-SYSVLHCDLAS 62

Query: 126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGAF 182
             SV +F D+ ++          +  L+ NA +    A   R T +G++  +  N++G F
Sbjct: 63  LDSVRQFVDNFRRTG------RPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHF 116

Query: 183 FLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC--------- 232
            LT LLL  L+ S     RIV V S TH        N  T+ G    R+           
Sbjct: 117 LLTNLLLEDLQRSENASPRIVIVGSITH--------NPNTLAGNVPPRATLGDLEGLAGG 168

Query: 233 ------------YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNI 279
                       +  A+ Y+ SK+C ++ +YELHR   L +   ++  +  PG + +T +
Sbjct: 169 LKGFNSMIDGGEFEGAKAYKDSKVCNMLTTYELHRR--LHEETGITFNSLYPGCIAETGL 226

Query: 280 MREVPSFLSLMAFTVLKLLGLLQSPEKGINSV------LDAALAPPE--TSGVYFFGGK- 330
            RE       +     K         KG  S       L A +A P    SGVY+  GK 
Sbjct: 227 FREHYPLFRTLFPPFQKY------ITKGYVSEEEAGERLAAVIADPSLGVSGVYWSWGKA 280

Query: 331 -GRTVN-SSALSFNSKLAGELWTTSCNL 356
            G   N SS  S + + A +LW  S  L
Sbjct: 281 SGSFENQSSQESSDDEKARKLWEISEKL 308

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  109 bits (273), Expect = 8e-28
 Identities = 72/252 (28%), Positives = 105/252 (41%), Gaps = 40/252 (15%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAF 119
           +   V +VTGA+SG+G A A AL+REG  VV+   RS    +E +A         R  A 
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62

Query: 120 QVDLSS-FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMS 175
             D+S   +SV     + ++          I +L+NNAGI    + L   T E +D+++ 
Sbjct: 63  AADVSDDEESVEALVAAAEEE------FGRIDILVNNAGIAGPDAPLEELTEEDWDRVID 116

Query: 176 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 235
            N +GAF LT+  LPL+K      RIVN++S         Q                   
Sbjct: 117 VNLLGAFLLTRAALPLMK----KQRIVNISSVAGLGGPPGQAA----------------- 155

Query: 236 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL 295
              Y  SK  L+  +  L   L     R + V A  PG + T +   + S        + 
Sbjct: 156 ---YAASKAALIGLTKALALELA---PRGIRVNAVAPGYIDTPMTAALESAELEALKRLA 209

Query: 296 KL--LGLLQSPE 305
               LG L +PE
Sbjct: 210 ARIPLGRLGTPE 221

Length = 251

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  103 bits (260), Expect = 4e-26
 Identities = 71/272 (26%), Positives = 106/272 (38%), Gaps = 57/272 (20%)

Query: 65  VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTGA  G+G      L++ G   V+L  R        +  +  R +   +   Q+D+
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKL--RAEGLSVRFHQLDV 59

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIG 180
           +   S+    D +++       +  + +L+NNAGI       S  T E   + M TN+ G
Sbjct: 60  TDDASIEAAADFVEE------KYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFG 113

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
              +T+ LLPLLK SP   RIVNV+S                 G              Y 
Sbjct: 114 TVDVTQALLPLLKKSPAG-RIVNVSS---------------GLG---------SLTSAYG 148

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL 300
            SK  L   +  L + L   K   + V A  PG VKT+           M          
Sbjct: 149 VSKAALNALTRILAKEL---KETGIKVNACCPGWVKTD-----------MGG-----GKA 189

Query: 301 LQSPEKGINSVLDAALAPPETS-GVYFFGGKG 331
            ++PE+G  + +  AL PP+      FF  K 
Sbjct: 190 PKTPEEGAETPVYLALLPPDGEPTGKFFSDKK 221

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  104 bits (260), Expect = 1e-25
 Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 25/298 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TGA SG+G   A + +  G HV+L  R+    S  ++ I      AR+EA  +DL+
Sbjct: 3   VIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLA 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
           S +SV +F ++ +      +    + +L+ NA + A    LT +G +     N++G F+L
Sbjct: 63  SLRSVQRFAEAFKA----KNSP--LHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYL 116

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRS---KCYPCARIYEY 241
            +LL  +L+ S  P+R++ V+S +HR      + +      F L S   K Y     Y  
Sbjct: 117 VQLLEDVLRRSA-PARVIVVSSESHR---FTDLPDSCGNLDFSLLSPPKKKYWSMLAYNR 172

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFLSLMAFTVLKLLGL 300
           +KLC ++FS ELHR L     R ++  +  PG ++ ++I R      +L+ FT+ +    
Sbjct: 173 AKLCNILFSNELHRRL---SPRGITSNSLHPGNMMYSSIHRNW-WVYTLL-FTLAR--PF 225

Query: 301 LQSPEKGINSVLDAALAPPET--SGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 356
            +S ++G  + +  A AP      G+YF          S  + +   A +LW  S  L
Sbjct: 226 TKSMQQGAATTVYCATAPELEGLGGMYF--NNCFRCLPSPEAQSEATAQQLWELSERL 281

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  102 bits (257), Expect = 2e-25
 Identities = 56/232 (24%), Positives = 90/232 (38%), Gaps = 42/232 (18%)

Query: 59  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 118
           T +K  V ++TGA+SG+G A A AL+  G  VVL  R      E +  +          A
Sbjct: 2   TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARR----EERLEALADEIGAGAALA 57

Query: 119 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMST 176
             +D++   +V    ++L       +    I +L+NNAG+           + +D+M+ T
Sbjct: 58  LALDVTDRAAVEAAIEALP------EEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDT 111

Query: 177 NYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVF-NAQVNNETITGKFFLRSKCY 233
           N  G    T+ +LP +    S     I+N+ S   R  +    V   T   K  +R+   
Sbjct: 112 NVKGLLNGTRAVLPGMVERKSGH---IINLGSIAGRYPYPGGAVYGAT---KAAVRA--- 162

Query: 234 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
                          FS  L + L       + V    PG+V+T     V  
Sbjct: 163 ---------------FSLGLRQELA---GTGIRVTVISPGLVETTEFSTVRF 196

Length = 246

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 3e-25
 Identities = 89/291 (30%), Positives = 131/291 (45%), Gaps = 41/291 (14%)

Query: 55  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 114
           VP ++G KR V  VTGA+ GLG   A  L+  G  V+L  R+       +A I +   DA
Sbjct: 9   VPDLSG-KRAV--VTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDA 65

Query: 115 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR-LTPEGYDQM 173
           +L    +DLSS  SV    + L+           I LLINNAG++    R  T +G++  
Sbjct: 66  KLSLRALDLSSLASVAALGEQLRA------EGRPIHLLINNAGVMTPPERQTTADGFELQ 119

Query: 174 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF--THRNVFNAQVNNETITGKFFLRSK 231
             TN++G F LT  LLPLL+     +R+ + +S       +    +N E          +
Sbjct: 120 FGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWE----------R 167

Query: 232 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH----VSVIAADPGVVKTNIMREVPSF- 286
            Y   R Y  SK+ + +F+ EL R     +SR     ++   A PGV  TN++   P   
Sbjct: 168 SYAGMRAYSQSKIAVGLFALELDR-----RSRAAGWGITSNLAHPGVAPTNLLAARPEVG 222

Query: 287 -----LSLMAFTVLKLLGLL-QSPEKGINSVLDAALAPPETSGVYFFGGKG 331
                L +     L   G L  + E  I   L AA + P+  G  F+G +G
Sbjct: 223 RDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATS-PDAEGGAFYGPRG 272

Length = 313

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 94.2 bits (235), Expect = 2e-22
 Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 13/145 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+ G+G A A  L+ EG  V +  RS    +ET+ +I +   +A   A + D+S
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAA--ALEADVS 59

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
             ++V    + ++           + +L+NNAGI       R++ E +D +++ N  G F
Sbjct: 60  DREAVEALVEKVEAE------FGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVF 113

Query: 183 FLTKLLLP-LLKNSPVPSRIVNVTS 206
            +T+ ++  ++K      RI+N++S
Sbjct: 114 NVTQAVIRAMIKRR--SGRIINISS 136

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 95.1 bits (237), Expect = 4e-22
 Identities = 70/250 (28%), Positives = 107/250 (42%), Gaps = 46/250 (18%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
           +   I+TGA+SG+G  AA AL++ G+HV++  R+    +E  A       D       +D
Sbjct: 6   KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK-AEAAAQELGIPPD-SYTIIHID 63

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYI 179
           L    SV +F D  +       +   +  L+ NA +   L      +P+GY+  M+TN++
Sbjct: 64  LGDLDSVRRFVDDFRA------LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHL 117

Query: 180 GAFFLTKLLLPLLKNSPVPS-RIVNVTSFTH-----------------------RNVFNA 215
           G F L  LLL  LK SP P  R+V + + T                           F A
Sbjct: 118 GHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKA 177

Query: 216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-V 274
            ++     GK F   K       Y+ SKLC ++   ELHR     +S  ++  +  PG V
Sbjct: 178 PIS--MADGKKFKPGKA------YKDSKLCNMLTMRELHRR--YHESTGITFSSLYPGCV 227

Query: 275 VKTNIMREVP 284
             T + R  P
Sbjct: 228 ADTPLFRNTP 237

Length = 322

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 13/149 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT--SRNKDARLEAFQVD 122
             ++TG +SG+G A A  L +EG +V++V RS   L E + +I   +     ++     D
Sbjct: 3   HVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISAD 62

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQMMSTNYI 179
           LS ++ V +      +     D+      ++N AGI +       LT E +++ M  NY 
Sbjct: 63  LSDYEEVEQAFAQAVEKGGPPDL------VVNCAGI-SIPGLFEDLTAEEFERGMDVNYF 115

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFT 208
           G+  +   +LPL+K    P  IV V+S  
Sbjct: 116 GSLNVAHAVLPLMK-EQRPGHIVFVSSQA 143

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 92.4 bits (230), Expect = 3e-21
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 13/146 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             IVTG  SGLG     AL++ G HV++  R   +  E +A I        +E   +DL+
Sbjct: 28  TAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI------DGVEVVMLDLA 81

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
             +SV  F +         D    I +LINNAG++A       +G++   +TN++G F L
Sbjct: 82  DLESVRAFAERF------LDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFAL 135

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHR 210
             LL P L      +R+V ++S  HR
Sbjct: 136 VNLLWPALAAGA-GARVVALSSAGHR 160

Length = 315

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 90.6 bits (226), Expect = 4e-21
 Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 48/250 (19%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD-ITSRNKDARLEAFQVDL 123
           V +VTGA+ G+G A A  L+ +G +VV+   SS   +E +   I +    A   A Q D+
Sbjct: 7   VALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKAL--AVQGDV 64

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
           S  +SV +   ++  ++         + +L+NNAGI       R+  E +D+++ TN  G
Sbjct: 65  SDAESVERAVDEAKAEF-------GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTG 117

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
            F LTK +   +       RI+N++S         Q N                    Y 
Sbjct: 118 VFNLTKAVARPMMKQRS-GRIINISSVVGLMGNPGQAN--------------------YA 156

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-----SFLSLMAFTVL 295
            SK  ++ F+  L R L    SR ++V A  PG ++T++   +P     + L+ +     
Sbjct: 157 ASKAGVIGFTKSLARELA---SRGITVNAVAPGFIETDMTDALPEDVKEAILAQIP---- 209

Query: 296 KLLGLLQSPE 305
             LG L  PE
Sbjct: 210 --LGRLGQPE 217

Length = 248

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 90.1 bits (224), Expect = 5e-21
 Identities = 58/220 (26%), Positives = 87/220 (39%), Gaps = 38/220 (17%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
            V +VTGA+ G+G   A AL+R+G+ V L  R+   L+   A          +EA   D 
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSAS------GGDVEAVPYDA 54

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
              +      D+L+           I +L++NAGI    T    +    +   S N I  
Sbjct: 55  RDPEDARALVDALRDRF------GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAP 108

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
             LT+ LLP L+ +    R+V + S               ++GK  L          Y  
Sbjct: 109 AELTRALLPALREAG-SGRVVFLNS---------------LSGKRVLAG-----NAGYSA 147

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 281
           SK  L   ++ L R  G D    VS +   PG V T + +
Sbjct: 148 SKFALRALAHAL-RQEGWDHGVRVSAVC--PGFVDTPMAQ 184

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 90.4 bits (225), Expect = 9e-21
 Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 41/231 (17%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +K    ++TGA+SG+GA  A  L+R G++++LV R    L     ++  +     +E   
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG-VEVEVIP 62

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQMMSTN 177
            DLS  +++ + +D L++          I +L+NNAG   T      L+ +  ++M+  N
Sbjct: 63  ADLSDPEALERLEDELKERGGP------IDVLVNNAGF-GTFGPFLELSLDEEEEMIQLN 115

Query: 178 YIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 236
            +    LTK +LP +++       I+N+ S                 G         P  
Sbjct: 116 ILALTRLTKAVLPGMVERG--AGHIINIGS---------------AAGL-------IPTP 151

Query: 237 R--IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
              +Y  +K  +L FS  L   L   K   V V A  PG  +T       S
Sbjct: 152 YMAVYSATKAFVLSFSEALREEL---KGTGVKVTAVCPGPTRTEFFDAKGS 199

Length = 265

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.1 bits (219), Expect = 5e-20
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 20/155 (12%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQV 121
           RPV +VTG   G+G   A AL+  GF + +        L+ T  ++ +      +  F  
Sbjct: 2   RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPA 59

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR-----LTPEGYDQMMST 176
           D++   +     D+ Q           I  L+NNAG+     R     LTPE +D++++ 
Sbjct: 60  DVADLSAHEAMLDAAQAAW------GRIDCLVNNAGV-GVKVRGDLLDLTPESFDRVLAI 112

Query: 177 NYIGAFFLT----KLLLPLLKNSPVPSR-IVNVTS 206
           N  G FFLT    K +L   +   +P R IV V+S
Sbjct: 113 NLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSS 147

Length = 256

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 87.1 bits (217), Expect = 9e-20
 Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 11/142 (7%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTGA+ G+G A A  L+ +G  VV+   +        A++ +   +AR      D+S  
Sbjct: 9   LVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEAR--VLVFDVSDE 66

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFL 184
            +V   +  ++      +   ++ +L+NNAGI   A   R++ E +D+++  N  G F +
Sbjct: 67  AAV---RALIEA---AVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNV 120

Query: 185 TKLLLPLLKNSPVPSRIVNVTS 206
            +  LP +  +    RIVN++S
Sbjct: 121 VRAALPPMIKARY-GRIVNISS 141

Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 85.7 bits (213), Expect = 3e-19
 Identities = 58/271 (21%), Positives = 105/271 (38%), Gaps = 58/271 (21%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TG +SG+G A A AL+ +G+ V+   R+   L E++ +      +  LE  ++D++  
Sbjct: 4   LITGCSSGIGLALALALAAQGYRVIATARNPDKL-ESLGE----LLNDNLEVLELDVTDE 58

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFL 184
           +S+   K ++++ +   +    I +L+NNAG          + E   ++   N  G   +
Sbjct: 59  ESI---KAAVKEVI---ERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRV 112

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
           T+  LPL++      RIVNV+S               + G         P    Y  SK 
Sbjct: 113 TRAFLPLMRKQGSG-RIVNVSS---------------VAGLV-----PTPFLGPYCASKA 151

Query: 245 CLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------------FL 287
            L   S     EL    G+     V++I  +PG V+T                       
Sbjct: 152 ALEALSESLRLEL-APFGI----KVTII--EPGPVRTGFADNAAGSALEDPEISPYAPER 204

Query: 288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP 318
             +      +      PEK  + ++ A  + 
Sbjct: 205 KEIKENAAGVGSNPGDPEKVADVIVKALTSE 235

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 85.4 bits (212), Expect = 3e-19
 Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 11/146 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA  GLGAA A AL+  G  V      +    E  A + +    A   A   DL+
Sbjct: 9   RALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRA--HAIAADLA 66

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
              SV +F D+    L        +  L+NNAGI    +++ L  + +D +M+ N  G F
Sbjct: 67  DPASVQRFFDAAAAAL------GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTF 120

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFT 208
            + +  LP L++S    RIVN+ S T
Sbjct: 121 LMLRAALPHLRDSG-RGRIVNLASDT 145

Length = 250

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.9 bits (211), Expect = 5e-19
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 14/146 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  GLG A A  L+R G  VV+  RS    +E + +        R +A Q D++
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVE-AVEALGRRAQAVQADVT 66

Query: 125 SFQSVLKFKDSLQQWLLDSDM--HSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
                   K +L+   + + +     I +L+NNAGI      + ++ + +D+++  N  G
Sbjct: 67  D-------KAALEA-AVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSG 118

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
            F L + ++P ++      RIVN++S
Sbjct: 119 VFHLLRAVVPPMRKQR-GGRIVNISS 143

Length = 249

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 84.7 bits (210), Expect = 6e-19
 Identities = 64/262 (24%), Positives = 100/262 (38%), Gaps = 46/262 (17%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           IVTG + GLGAA A  L + G  V+ V RS H        + +     RL   ++DLS  
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRH------PSLAAA-AGERLAEVELDLSDA 57

Query: 127 QSVLKF--KDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGA 181
            +   +   D L  ++      +S  LLINNAG +      + L      + +  N    
Sbjct: 58  AAAAAWLAGDLLAAFVDG----ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAP 113

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
             LT  L     +     RI++++S   RN                     Y    +Y  
Sbjct: 114 LMLTAALAQAA-SDAAERRILHISSGAARNA--------------------YAGWSVYCA 152

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-----PSFLSLMAFTVLK 296
           +K  L   +    R + LD +R + +++  PGVV T +   +       F     F  LK
Sbjct: 153 TKAALDHHA----RAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELK 208

Query: 297 LLGLLQSPEKGINSVLDAALAP 318
             G L +PE     ++   L+ 
Sbjct: 209 ASGALSTPEDAARRLIAYLLSD 230

Length = 243

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 82.2 bits (204), Expect = 9e-19
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 18/147 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREG-FHVVLVGRS--SHLLSETMADITSRNKDARLEAFQV 121
             ++TG T GLG A A  L+ EG  H+VLV R   +   +E +A++ +    A +     
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALG--AEVTVAAC 59

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYI 179
           D++   ++     +L        +   +  +++NAG+L       LTPE ++++++    
Sbjct: 60  DVADRDALAALLAALPA-----ALG-PLDGVVHNAGVLDDGPLEELTPERFERVLAPKVT 113

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           GA+ L +L   L          V  +S
Sbjct: 114 GAWNLHELTRDLDL-----GAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 84.8 bits (210), Expect = 1e-18
 Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 20/160 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA++G+G A+A AL++EG +V+ V  +   +SET+  I S    A  +A+ VD+S
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYVLAVDIAEA-VSETVDKIKSNGGKA--KAYHVDIS 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTP---EGYDQMMSTNYIGA 181
             Q V  F   +++          + +L NNAG+   + R+     + +D++M+ +  G 
Sbjct: 65  DEQQVKDFASEIKE------QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGT 118

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFT------HRNVFNA 215
           F +TK+LLPL+        I+N +SF+      +R+ +NA
Sbjct: 119 FLMTKMLLPLMMEQ--GGSIINTSSFSGQAADLYRSGYNA 156

Length = 272

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 83.0 bits (206), Expect = 3e-18
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 13/151 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G A A  L+ +G  V++V       + T   + +     +  A QVD+ 
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG--GKARARQVDVR 65

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
              ++       ++ +         + +L+ NAGI  L   + +  E +++++  N  G 
Sbjct: 66  DRAALKAAVAAGVEDF-------GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGT 118

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV 212
           F LT+  LP L  +    RIV  +S     V
Sbjct: 119 FLLTQAALPALIRAGGG-RIVLTSSVAGPRV 148

Length = 251

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 82.3 bits (203), Expect = 5e-18
 Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 7/140 (5%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGA SG+G AAA A+++ G  V +V R+     E   +I + + +  +    VD+S  
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK 186
           + V +F +  ++          + +LINNAG +     LT +G ++  +TN +G + LT 
Sbjct: 65  KQVWEFVEEFKE------EGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTT 118

Query: 187 LLLPLLKNSPVPSRIVNVTS 206
            L+P+L+    P R++ V+S
Sbjct: 119 HLIPVLEKEEDP-RVITVSS 137

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 81.9 bits (203), Expect = 5e-18
 Identities = 70/273 (25%), Positives = 106/273 (38%), Gaps = 47/273 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFH--VVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
           V I+TGA+ G+G A A  L + G    VVL+ RS   L E   ++       R+   + D
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRP---GLRVTTVKAD 57

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 179
           LS    V +  +++++      +     LLINNAG L   S++     +   +    N  
Sbjct: 58  LSDAAGVEQLLEAIRK------LDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLT 111

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
               LT  LL   K   +   +VNV+S    N F                        +Y
Sbjct: 112 SPVCLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWG--------------------LY 151

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV------PSFLSLMAFT 293
             SK    +F     R L  ++   V V++  PGVV T++ RE+      P   S   F 
Sbjct: 152 CSSKAARDMFF----RVLAAEEPD-VRVLSYAPGVVDTDMQREIRETSADPETRSR--FR 204

Query: 294 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYF 326
            LK  G L  PE+    + +        SG + 
Sbjct: 205 SLKEKGELLDPEQSAEKLANLLEKDKFESGAHV 237

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 81.9 bits (203), Expect = 5e-18
 Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 43/265 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTGA+ G+G A A  L+R+G  VV+    S     E +A+I +     +  A Q D+
Sbjct: 5   VALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEA--AGGKAIAVQADV 62

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSS--IQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 179
           S    V +        L D+   +   + +L+NNAG+      +  + E +D+M + N  
Sbjct: 63  SDPSQVAR--------LFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTK 114

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
           GAFF+ +     L++     RI+N++S              ++T  +       P    Y
Sbjct: 115 GAFFVLQEAAKRLRDG---GRIINISS--------------SLTAAY------TPNYGAY 151

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG 299
             SK  +  F+  L + LG    R ++V A  PG V T++     +  ++  +  +  LG
Sbjct: 152 AGSKAAVEAFTRVLAKELG---GRGITVNAVAPGPVDTDMFYAGKTEEAVEGYAKMSPLG 208

Query: 300 LLQSPEKGINSVLDAALAPPETSGV 324
            L  PE     V  A LA P+   V
Sbjct: 209 RLGEPEDIAPVV--AFLASPDGRWV 231

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 81.6 bits (202), Expect = 8e-18
 Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 38/216 (17%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGA+SG+G A A   ++ G  ++L GR +  L E +AD        ++   Q+D+S  
Sbjct: 4   LITGASSGIGEATARRFAKAGAKLILTGRRAERLQE-LADELGAKFPVKVLPLQLDVSDR 62

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGAFF 183
           +S+    ++L       +    I +L+NNAG+   L  +     E ++ M+ TN  G   
Sbjct: 63  ESIEAALENL------PEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLN 116

Query: 184 LTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
           +T+L+LP++  +N      I+N+ S               I G++      Y    +Y  
Sbjct: 117 VTRLILPIMIARNQ---GHIINLGS---------------IAGRYP-----YAGGNVYCA 153

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 277
           +K  +  FS  L ++L +     V+ I  +PG+V+T
Sbjct: 154 TKAAVRQFSLNLRKDL-IGTGIRVTNI--EPGLVET 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 40/223 (17%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TG TSG+G A A      G  V++ GR    L+E   ++ +      +    +D+   
Sbjct: 9   LITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN------IHTIVLDVGDA 62

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAF 182
           +SV        + LL    + ++ +LINNAGI             +  D  + TN IG  
Sbjct: 63  ESVEAL----AEALLSE--YPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPI 116

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            L K  LP LK  P  + IVNV+S                 G  F+     P   +Y  +
Sbjct: 117 RLIKAFLPHLKKQP-EATIVNVSS-----------------GLAFVPMAANP---VYCAT 155

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
           K  L  ++  L   L   K   V V+   P  V T +  E  +
Sbjct: 156 KAALHSYTLALRHQL---KDTGVEVVEIVPPAVDTELHEERRN 195

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 79.9 bits (198), Expect = 3e-17
 Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 49/227 (21%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL----LSETMADITSRNKDARLEAFQ 120
           V IVTGA+ G+G A A  L++EG  VV+   +  +      E + +I     DA   A +
Sbjct: 7   VAIVTGASGGIGRAIAELLAKEGAKVVI---AYDINEEAAQELLEEIKEEGGDA--IAVK 61

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMST 176
            D+SS + V    + +       +    I +L+NNAGI    L T   +T E +D+++  
Sbjct: 62  ADVSSEEDVENLVEQI------VEKFGKIDILVNNAGISNFGLVTD--MTDEEWDRVIDV 113

Query: 177 NYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 234
           N  G   LT+  LP +  + S V   IVN++S                            
Sbjct: 114 NLTGVMLLTRYALPYMIKRKSGV---IVNISS----------------IWGLI--GA--S 150

Query: 235 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 281
           C  +Y  SK  +  F+  L + L     R V+ +A  PG + T +  
Sbjct: 151 CEVLYSASKGAVNAFTKALAKELAPSGIR-VNAVA--PGAIDTEMWS 194

Length = 247

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 81.1 bits (200), Expect = 3e-17
 Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 42/220 (19%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           ++P  I+TGA+SGLG  AA AL+  G +HV++  R   L +E  A      KD+      
Sbjct: 2   QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRD-FLKAEQAAKSLGMPKDS-YTIMH 59

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTN 177
           +DL S  SV +F    ++          +  L+ NA +    A   R T +G++  + TN
Sbjct: 60  LDLGSLDSVRQFVQQFRE------SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTN 113

Query: 178 YIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFNAQVNNETITGKF---------- 226
           ++G F L  LLL  LKNSP    R++ V S T         N  T+ G            
Sbjct: 114 HLGHFLLCNLLLDDLKNSPNKDKRLIIVGSIT--------GNTNTLAGNVPPKANLGDLS 165

Query: 227 -----------FLRSKCYPCARIYEYSKLCLLIFSYELHR 255
                       +  K +  A+ Y+ SK+C ++   ELHR
Sbjct: 166 GLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHR 205

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 3e-17
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 33/220 (15%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
            + + IVTGA+SG G      L+++G+ V+   R+       ++  T  N    ++  Q+
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL 61

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYI 179
           D++   S+  F+  L++          I LL+NNAG         +  E Y +   TN  
Sbjct: 62  DVTDQNSIHNFQLVLKE-------IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVF 114

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
           GA  +T+ +LP ++      +I+N++S               I+G+       +P    Y
Sbjct: 115 GAISVTQAVLPYMRKQK-SGKIINISS---------------ISGRV-----GFPGLSPY 153

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 279
             SK  L  FS  L   L   K   + V   +PG   TNI
Sbjct: 154 VSSKYALEGFSESLRLEL---KPFGIDVALIEPGSYNTNI 190

Length = 280

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 79.4 bits (196), Expect = 5e-17
 Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 38/225 (16%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQ 120
              V I+TG++SG+GA  A   +R G  + L GR +  L ET            ++    
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVV 61

Query: 121 VDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTN 177
            DL+  +   +    +L ++         + +L+NNAGILA         E YD++M+ N
Sbjct: 62  ADLTEEEGQDRIISTTLAKF-------GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLN 114

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
                +LTKL +P L  +     IVNV+S               + G    RS  +P   
Sbjct: 115 LRAVIYLTKLAVPHLIKT--KGEIVNVSS---------------VAGG---RS--FPGVL 152

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMR 281
            Y  SK  L  F+    R   L+ +   V V +  PGV+ T   R
Sbjct: 153 YYCISKAALDQFT----RCTALELAPKGVRVNSVSPGVIVTGFHR 193

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 78.7 bits (194), Expect = 9e-17
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+SGLGA  A  L++ G  VVL  R    L E  A+I +    A      +D++
Sbjct: 11  VALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAA--HVVSLDVT 68

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 181
            +QS+   K ++     +++   +I +L+NN+G+ +T+ +L   TP  +D +  TN  GA
Sbjct: 69  DYQSI---KAAVAH--AETEA-GTIDILVNNSGV-STTQKLVDVTPADFDFVFDTNTRGA 121

Query: 182 FFLT----KLLLPLLKNSP---VPSRIVNVTS 206
           FF+     K ++   K +       RI+N+ S
Sbjct: 122 FFVAQEVAKRMIARAKGAGNTKPGGRIINIAS 153

Length = 258

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 78.2 bits (192), Expect = 1e-16
 Identities = 67/218 (30%), Positives = 99/218 (45%), Gaps = 31/218 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTGA+ G+G A A  L+ +G  V +  GR+     ET+ +I S    A L   + DL
Sbjct: 8   VALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFL--IEADL 65

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
           +S   V K  + L+  L      S I +L+NNAGI    T    T E +D++M+ N    
Sbjct: 66  NSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAP 125

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
           FFL +  LPLL+      R++N++S   R  F   +                     Y  
Sbjct: 126 FFLIQQTLPLLR---AEGRVINISSAEVRLGFTGSI--------------------AYGL 162

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 279
           SK  L   +  L ++LG    R ++V    PG  KT+I
Sbjct: 163 SKGALNTMTLPLAKHLG---ERGITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 80.8 bits (200), Expect = 1e-16
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 25/152 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA+SG+G A A  ++  G  V LV R+   L E +A+I  R K     A+  DL+
Sbjct: 373 VVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEI--RAKGGTAHAYTCDLT 430

Query: 125 SFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAG------ILATSSRLTPEGYDQMMSTN 177
              +V    KD L +       H  +  L+NNAG      +  ++ R     Y++ M+ N
Sbjct: 431 DSAAVDHTVKDILAE-------HGHVDYLVNNAGRSIRRSVENSTDRF--HDYERTMAVN 481

Query: 178 YIGAFFLTKLLLPLLKNSPVPSR---IVNVTS 206
           Y GA  L   LLP         R   +VNV+S
Sbjct: 482 YFGAVRLILGLLP----HMRERRFGHVVNVSS 509

Length = 657

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 76.9 bits (190), Expect = 4e-16
 Identities = 63/225 (28%), Positives = 90/225 (40%), Gaps = 49/225 (21%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TGA+SG+G   AY L+R G  +VL  R    L E  ++              +D+S
Sbjct: 5   VVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELG-APSPHVVPLDMS 63

Query: 125 SFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD---QMMSTNYIG 180
             +   +  +++L+ +         + +LINNAGI +  S       D   ++M  NY G
Sbjct: 64  DLEDAEQVVEEALKLF-------GGLDILINNAGI-SMRSLFHDTSIDVDRKIMEVNYFG 115

Query: 181 AFFLTKLLLPLLKNSPVPSR--IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
              LTK  LP L      S+  IV V+S               I GK        P    
Sbjct: 116 PVALTKAALPHLIER---SQGSIVVVSS---------------IAGKI-----GVPFRTA 152

Query: 239 YEYSKLCLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNI 279
           Y  SK  L  F      EL          ++SV    PG++ TNI
Sbjct: 153 YAASKHALQGFFDSLRAELS-------EPNISVTVVCPGLIDTNI 190

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 76.3 bits (188), Expect = 1e-15
 Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 40/215 (18%)

Query: 67  IVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 125
           I+TGA+SGLG A A AL+  G +HVV+  R   L +E  A      KD+      +DL+S
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRD-FLKAERAAKSAGMPKDS-YTVMHLDLAS 58

Query: 126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAF 182
             SV +F D+ ++    S     + +L+ NA +    A     T +G++  + TN++G F
Sbjct: 59  LDSVRQFVDNFRR----SGR--PLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHF 112

Query: 183 FLTKLLLPLLKNSPVPS-RIVNVTSFTHR------NV---------------FNAQVNNE 220
            L++LLL  LK S  PS R++ V S T        NV                N   ++ 
Sbjct: 113 LLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSA 172

Query: 221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHR 255
            I G  F  +K       Y+ SK+C ++   E HR
Sbjct: 173 MIDGGEFDGAKA------YKDSKVCNMLTMQEFHR 201

Length = 308

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 11/146 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VT A+SG+G A A AL+REG  V +  R+   L    +++  R   A + A   DL+
Sbjct: 3   VALVTAASSGIGLAIARALAREGARVAICARNRENLERAASEL--RAGGAGVLAVVADLT 60

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAF 182
             + + +    +++     D    + +L+NNAG       + LT E + +      +   
Sbjct: 61  DPEDIDRL---VEKAG---DAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVI 114

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFT 208
            + + +LP +K      RIVN++S T
Sbjct: 115 RIVRAVLPGMKERGWG-RIVNISSLT 139

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 46/146 (31%), Positives = 60/146 (41%), Gaps = 24/146 (16%)

Query: 56  PPITGI----KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN 111
           PP   +    KR   ++TGA+SG+G AAA   +R G  VV V R   LL      IT   
Sbjct: 31  PPRQPVDLTGKR--ILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG 88

Query: 112 KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPE--- 168
            DA   A   DLS   +V    D+L   +        + +LINNAG    S R       
Sbjct: 89  GDAM--AVPCDLSDLDAV----DALVADVEKR--IGGVDILINNAG---RSIRRPLAESL 137

Query: 169 ----GYDQMMSTNYIGAFFLTKLLLP 190
                 ++ M  NY     L + L P
Sbjct: 138 DRWHDVERTMVLNYYAPLRLIRGLAP 163

Length = 293

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 75.1 bits (185), Expect = 2e-15
 Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 43/251 (17%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           I+TG + GLG A A  L  +G HV+ + R+ +     +A+      ++ L    +DL   
Sbjct: 5   IITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ----YNSNLTFHSLDLQDV 60

Query: 127 QSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAF 182
             +   F + L     D+   SSI  LINNAG++A    +     E     +  N +   
Sbjct: 61  HELETNFNEILSSIQEDNV--SSI-HLINNAGMVAPIKPIEKAESEELITNVHLNLLAPM 117

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            LT   +   K+  V  R++N++S   +N                     Y     Y  S
Sbjct: 118 ILTSTFMKHTKDWKVDKRVINISSGAAKNP--------------------YFGWSAYCSS 157

Query: 243 KLCLLIFSYELHRNLGL---DKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAFTV 294
           K  L +F+    + +     ++   V ++A  PGV+ TN+  ++ S     F +L  F  
Sbjct: 158 KAGLDMFT----QTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFIT 213

Query: 295 LKLLGLLQSPE 305
           LK  G L SPE
Sbjct: 214 LKEEGKLLSPE 224

Length = 251

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 13/142 (9%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGA+ G+G A A AL+  G  ++LVGR++  L    A +       R      DL+S 
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP---YPGRHRWVVADLTSE 65

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFL 184
                     ++          I +LINNAG+   A      PE  +++++ N      L
Sbjct: 66  AGREAVLARARE-------MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQL 118

Query: 185 TKLLLPLLKNSPVPSRIVNVTS 206
           T+ LLPLL+  P  + +VNV S
Sbjct: 119 TRALLPLLRAQPS-AMVVNVGS 139

Length = 263

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 74.8 bits (184), Expect = 2e-15
 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 24/157 (15%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQV 121
           RPV IVTGA+ G+G A A  L+  GF + +         +E +A++       R   FQ 
Sbjct: 1   RPVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEV--LAAGRRAIYFQA 58

Query: 122 DLSSFQSVLKFKDSLQQWLLD---SDMHSSIQLLINNAGILATSSR----LTPEGYDQMM 174
           D+           S  + LLD    D    +  L+NNAGI          LT + +D+++
Sbjct: 59  DIGEL--------SDHEALLDQAWEDFG-RLDCLVNNAGIAVRPRGDLLDLTEDSFDRLI 109

Query: 175 STNYIGAFFLT----KLLLPLLKNSPVPSR-IVNVTS 206
           + N  G FFLT    + ++        P R I+ VTS
Sbjct: 110 AINLRGPFFLTQAVARRMVEQPDRFDGPHRSIIFVTS 146

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 74.2 bits (183), Expect = 3e-15
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 43/226 (19%)

Query: 66  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 125
            +VTGA+ G+G A A  L++EG  V++  RSS   +E + +   +    +      D+S 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVE-ELKAYGVKALGVVCDVSD 59

Query: 126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIGA 181
            + V    + ++      +    I +L+NNAGI    L    R+  E +D ++ TN  G 
Sbjct: 60  REDVKAVVEEIE------EELGPIDILVNNAGITRDNLLM--RMKEEDWDAVIDTNLTGV 111

Query: 182 FFLTKLLL-PLLKNSPVPSRIVNVTSFT--HRNVFNAQVNNETITGKFFLRSKCYPCARI 238
           F LT+ +L  ++K      RI+N++S      N    Q N                    
Sbjct: 112 FNLTQAVLRIMIKQR--SGRIINISSVVGLMGNA--GQAN-------------------- 147

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           Y  SK  ++ F+  L + L    SR+++V A  PG + T++  ++ 
Sbjct: 148 YAASKAGVIGFTKSLAKELA---SRNITVNAVAPGFIDTDMTDKLS 190

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 74.1 bits (182), Expect = 3e-15
 Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 34/215 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+SG+G A A AL+ EG  V +  R    L     ++ +     +    ++D++
Sbjct: 5   VALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEG--GKALVLELDVT 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
             Q V    +   + L        + +L+NNAGI  L          + +M+ TN +G  
Sbjct: 63  DEQQVDAAVERTVEAL------GRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM 116

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
           + T   LP          IVN++S   R                         + +Y  +
Sbjct: 117 YTTHAALPHHLLRNK-GTIVNISSVAGRVA--------------------VRNSAVYNAT 155

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 277
           K  +  FS  L + +     R V VI  +PG V T
Sbjct: 156 KFGVNAFSEGLRQEVTERGVR-VVVI--EPGTVDT 187

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 73.4 bits (181), Expect = 7e-15
 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 9/147 (6%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V  +TG  +G+G A A A +  G  V + GR   +L     +I+S     R    Q D+ 
Sbjct: 5   VAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISS-ATGGRAHPIQCDVR 63

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAF 182
             ++V    D              I +LINNA    LA +  L+P G+  ++  +  G F
Sbjct: 64  DPEAVEAAVDETL------KEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTF 117

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTH 209
             TK +   L  +     I+N+++   
Sbjct: 118 NTTKAVGKRLIEAKHGGSILNISATYA 144

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 72.8 bits (179), Expect = 8e-15
 Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 41/245 (16%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TG  SG+G A A      G  V++ GR+   L+E  A+         +     D++  
Sbjct: 9   LITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE------IHTEVCDVADR 62

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAF 182
            S       L +WL     + ++ +LINNAGI      T +    +  +Q ++TN +   
Sbjct: 63  DSR----RELVEWLKKE--YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPI 116

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            LT LLLP L   P  + I+NV+S                 G  F+     P   +Y  +
Sbjct: 117 RLTALLLPHLLRQP-EATIINVSS-----------------GLAFVPMASTP---VYCAT 155

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIA-ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL 301
           K  +  ++  L   L   K   V VI  A P V  T    +    + L AF       + 
Sbjct: 156 KAAIHSYTLALREQL---KDTSVEVIELAPPLVDTTEGNTQARGKMPLSAFISETEDLVQ 212

Query: 302 QSPEK 306
            +P++
Sbjct: 213 NTPDR 217

Length = 245

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 71.6 bits (176), Expect = 2e-14
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 15/152 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TG + G+G A A AL  EG+ V +  R    L E  A++   N    +     D+ 
Sbjct: 8   VALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAEL---NNKGNVLGLAADVR 64

Query: 125 SFQSVLKFKDSL-QQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
               V +  D++   +         + +LI NAG+   A    LTPE +  ++ TN  GA
Sbjct: 65  DEADVQRAVDAIVAAF-------GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGA 117

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 213
           F+  K  +P LK       I+N++S    N F
Sbjct: 118 FYTIKAAVPALKRG--GGYIINISSLAGTNFF 147

Length = 237

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
             P  ++TGA+SG+G A A A ++ G+ + LV RS   L E +A    R+   +  A+ +
Sbjct: 5   SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-EALAAEL-RSTGVKAAAYSI 62

Query: 122 DLSSFQSVL-KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-TP-EGYDQMMSTNY 178
           DLS+ +++     + L+Q+           +LINNAG+  T   L  P   +  ++  N 
Sbjct: 63  DLSNPEAIAPGIAELLEQFGC-------PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNL 115

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 213
              F     +LP ++       I+NV+S   RN F
Sbjct: 116 TSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAF 149

Length = 241

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 71.6 bits (176), Expect = 3e-14
 Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 13/143 (9%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTG  SG+G A A A +  G  V +   S   L+ T A    R   A++ A   D++  
Sbjct: 15  LVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA----RLPGAKVTATVADVADP 70

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQMMSTNYIGAFF 183
             V +  D+  +     D      +L+NNAGI   +     +TPE ++Q ++ N  G F+
Sbjct: 71  AQVERVFDTAVERFGGLD------VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 184 LTKLLLPLLKNSPVPSRIVNVTS 206
             +  +PLLK S     I+ ++S
Sbjct: 125 FARAAVPLLKASGHGGVIIALSS 147

Length = 264

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 70.8 bits (174), Expect = 4e-14
 Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+ G+G   A  L+  G ++V+  R+     E    I     +A   AF  D+S
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEAT--AFTCDVS 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
             +++   K +++   ++ D    I +L+NNAGI     +       +  ++  N  G F
Sbjct: 65  DEEAI---KAAVEA--IEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVF 118

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
           F+++ +   +       +I+N+ S
Sbjct: 119 FVSQAVARHMIKQGHG-KIINICS 141

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 70.6 bits (173), Expect = 6e-14
 Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTG T G+G A    L+  G  V    R+   L E + +   +      E    D+SS 
Sbjct: 10  LVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKV--EGSVCDVSSR 67

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAFFL 184
                 +  L   +        + +L+NNAG          T E Y  +MSTN+  A+ L
Sbjct: 68  SE----RQELMDTVASH-FGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHL 122

Query: 185 TKLLLPLLKNSPVPSRIVNVTS 206
           ++L  PLLK S   + IV ++S
Sbjct: 123 SRLAHPLLKASGNGN-IVFISS 143

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 70.4 bits (173), Expect = 7e-14
 Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 52/271 (19%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
            V I+TG  SG+G A A  L ++G  V ++ R  +      A++ + N   +    Q D+
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDR--NENPGAAAELQAINPKVKATFVQCDV 58

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNY 178
           +S++ +   FK ++       +    + +LINNAGIL   S       P  +++ +  N 
Sbjct: 59  TSWEQLAAAFKKAI-------EKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNL 111

Query: 179 IGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 236
            G    T L L  +          IVN+ S               + G        YP  
Sbjct: 112 TGVINTTYLALHYMDKNKGGKGGVIVNIGS---------------VAG-------LYPAP 149

Query: 237 R--IYEYSKLCLLIFSYELHRNLG-LDKSRH-VSVIAADPGVVKTNIMREVPSFLSLMAF 292
           +  +Y  SK  ++ F+    R+L  L + +  V V A  PG   T ++ ++ +  + M  
Sbjct: 150 QFPVYSASKHGVVGFT----RSLADLLEYKTGVRVNAICPGFTNTPLLPDLVAKEAEML- 204

Query: 293 TVLKLLGLLQSPEKGINSVLDAALAPPETSG 323
                    QSPE  +   +   +   E +G
Sbjct: 205 ----PSAPTQSPEV-VAKAIVYLIEDDEKNG 230

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 15/150 (10%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           ++    ++TGA  G+G A A AL++EG +V L+ R+   L     ++       ++    
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV--EAYGVKVVIAT 62

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 178
            D+S ++ V    + L+  L       SI +LINNAGI        L P  +++++  N 
Sbjct: 63  ADVSDYEEVTAAIEQLKNEL------GSIDILINNAGISKFGKFLELDPAEWEKIIQVNL 116

Query: 179 IGAFFLTKLLLPLL--KNSPVPSRIVNVTS 206
           +G ++ T+ +LP +  + S     I+N++S
Sbjct: 117 MGVYYATRAVLPSMIERQS---GDIINISS 143

Length = 239

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 11/144 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA SG+G A A AL+  G +VV+                       +     D++
Sbjct: 3   TALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAG--GSVIYLPADVT 60

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
               +    D +      +     + +L+NNAGI  +A      PE +D++++     AF
Sbjct: 61  KEDEI---ADMIAA---AAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAF 114

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
              +  LP +K      RI+N+ S
Sbjct: 115 HTIRAALPHMKKQGW-GRIINIAS 137

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 11/144 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + ++TG  SG+G   A   ++ G  VV++  +     ET      R    ++  ++ D+S
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETAN--NVRKAGGKVHYYKCDVS 58

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAF 182
             + V +    +++ + D      + +LINNAG+++      L  E  ++    N +  F
Sbjct: 59  KREEVYEAAKKIKKEVGD------VTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHF 112

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
           + TK  LP +        IV + S
Sbjct: 113 WTTKAFLPDMLERNHGH-IVTIAS 135

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 68.5 bits (168), Expect = 2e-13
 Identities = 62/276 (22%), Positives = 104/276 (37%), Gaps = 54/276 (19%)

Query: 67  IVTGATSGLGAA-AAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 125
           ++TGA+ G+G       L+R    V+   R     +E +A + +    +RL   ++D++ 
Sbjct: 2   LITGASRGIGLELVRQLLARGNNTVIATCRDPSAATE-LAALGA--SHSRLHILELDVTD 58

Query: 126 --FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIG 180
              +S     + L    LD        +LINNAGIL +         E   ++   N +G
Sbjct: 59  EIAESAEAVAERLGDAGLD--------VLINNAGILHSYGPASEVDSEDLLEVFQVNVLG 110

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
              LT+  LPLL      ++I+N++S                +         Y     Y 
Sbjct: 111 PLLLTQAFLPLLLKG-ARAKIINISS-------------RVGSIGDNTSGGWYS----YR 152

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL 300
            SK  L + +  L   L   K   ++V++  PG V+T++                K  G 
Sbjct: 153 ASKAALNMLTKSLAVEL---KRDGITVVSLHPGWVRTDMGGPFA-----------KNKGP 198

Query: 301 LQSPE--KGINSVLDAALAPPETSGVYFFGGKGRTV 334
           +   E   G+  V+D      E SG  F    G  +
Sbjct: 199 ITPEESVAGLLKVIDNLN--EEDSG-KFLDYDGTEI 231

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 70.6 bits (173), Expect = 3e-13
 Identities = 50/225 (22%), Positives = 86/225 (38%), Gaps = 38/225 (16%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
           +  V +VTGA  G+G AA    +R G  VV+  R+     E    +   +      A  +
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHH-----ALAM 58

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT----PEGYDQMMSTN 177
           D+S    + +  + L +          I +L+NNAG+   +   T     E + ++ + N
Sbjct: 59  DVSDEAQIREGFEQLHR------EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAIN 112

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
             GA+ + +  L L+      + IVNV S          V                P   
Sbjct: 113 LTGAYLVAREALRLMIEQGHGAAIVNVASGA------GLVAL--------------PKRT 152

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
            Y  SK  ++  +  L        ++ + V A  PG V+T ++ E
Sbjct: 153 AYSASKAAVISLTRSLACEWA---AKGIRVNAVLPGYVRTQMVAE 194

Length = 520

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 68.7 bits (168), Expect = 3e-13
 Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 32/259 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+ G+GAA A AL + G  VV   R    +    A+  S      L  +Q DLS
Sbjct: 8   VALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPT-LFPYQCDLS 66

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT--PEGYDQMMSTNYIGAF 182
           + + +L    S+   +     H  + + INNAG+      L+   EG+ +M   N +   
Sbjct: 67  NEEQIL----SMFSAI--RTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALS 120

Query: 183 FLTKLLLPLLKNSPVP-SRIVNVTSFT-HRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
             T+     +K   V    I+N+ S + HR    +  +       F+        A  + 
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFH-------FY-------AATKHA 166

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL 300
            + L   +   EL      +   H+   +  PG+V+T    ++       A    + +  
Sbjct: 167 VTALTEGL-RQELR-----EAKTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESIPC 220

Query: 301 LQSPEKGINSVLDAALAPP 319
           L+ PE   N+VL     PP
Sbjct: 221 LK-PEDVANAVLYVLSTPP 238

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 67.5 bits (165), Expect = 7e-13
 Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 15/145 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA +G+GAA A  L+REG  VV+            A            A +VD++
Sbjct: 5   VAIVTGAGAGIGAACAARLAREGARVVVADIDG-----GAAQAVVAQIAGGALALRVDVT 59

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 181
             Q V    +   +          + LL+NNAG +  +  +       +DQ M+ N  G 
Sbjct: 60  DEQQVAALFERAVE------EFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGT 113

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           F   +   P +      S IVN++S
Sbjct: 114 FLCCRHAAPRMIARGGGS-IVNLSS 137

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 7e-13
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 15/146 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG+  GLG   A AL+  G HV++ GR++  L   +A +  R      EA   D++
Sbjct: 13  VALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL--RAAGGAAEALAFDIA 70

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR----LTPEGYDQMMSTNYIG 180
             ++V      +         H  + +L+NN G  A   R    L       ++ T+ + 
Sbjct: 71  DEEAVAAAFARID------AEHGRLDILVNNVG--ARDRRPLAELDDAAIRALLETDLVA 122

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
              L++L    +K      RI+ +TS
Sbjct: 123 PILLSRLAAQRMK-RQGYGRIIAITS 147

Length = 256

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 67.2 bits (165), Expect = 8e-13
 Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 36/221 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA+SG+G   A   + EG  VV+  R+        A+I +     R  A   D+S
Sbjct: 7   VAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVS 63

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRL--TPEGYDQMMSTNYIGA 181
               V   + ++   L   +   S+ +L+NNAG        L      +D++ + N    
Sbjct: 64  DEADV---EAAVAAAL---ERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSP 117

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
           +  T+  +P ++     + IVNV S                 G   LR +  P    Y  
Sbjct: 118 YLWTQAAVPAMRGEGGGA-IVNVAS---------------TAG---LRPR--PGLGWYNA 156

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
           SK  ++  +  L   LG DK R V+ +A  P VV+T ++  
Sbjct: 157 SKGAVITLTKALAAELGPDKIR-VNAVA--PVVVETGLLEA 194

Length = 251

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 9e-13
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 13/124 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG  SG+G A A   + +G  V L+ R     SE +A++ ++      +    D+S
Sbjct: 17  VAVVTGGASGIGHAIAELFAAKGARVALLDR-----SEDVAEVAAQLLGGNAKGLVCDVS 71

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
             QSV     ++            I +L+N+AG+  LA +  ++ E +D+ +  N  G+F
Sbjct: 72  DSQSVEAAVAAVIS------AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSF 125

Query: 183 FLTK 186
            + +
Sbjct: 126 LMAQ 129

Length = 255

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 66.7 bits (163), Expect = 1e-12
 Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 12/144 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA SG+G A A   +REG  VV+  R +       A I +     R  A Q D+ 
Sbjct: 7   VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA---GGRAFARQGDVG 63

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAF 182
           S ++V    D +            + +L+NNAG     T        +D +M  N  G F
Sbjct: 64  SAEAVEALVDFVAA------RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVF 117

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
              K  +P+++     S IVN  S
Sbjct: 118 LWAKYAIPIMQRQGGGS-IVNTAS 140

Length = 252

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 68.1 bits (167), Expect = 2e-12
 Identities = 56/224 (25%), Positives = 83/224 (37%), Gaps = 47/224 (20%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTGA SG+G   A A +REG  VV           T   I +    A   A++VD+S  
Sbjct: 319 VVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDA 376

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMMSTNYIG 180
            ++  F + +         H    +++NNAGI      L T    + E +D+++  N  G
Sbjct: 377 DAMEAFAEWV------RAEHGVPDIVVNNAGIGMAGGFLDT----SAEDWDRVLDVNLWG 426

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS---FTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
                +L    +        IVNV S   +       A                      
Sbjct: 427 VIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPA---------------------- 464

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 281
            Y  SK  +L+ S  L   L    +  + V A  PG V TNI+ 
Sbjct: 465 -YATSKAAVLMLSECLRAELA---AAGIGVTAICPGFVDTNIVA 504

Length = 582

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 47/222 (21%)

Query: 67  IVTGATSGLGAAAAYALSREGFHV---VLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           ++TG  SG G   A  L   GF V    L        ++ +  + S     RL   Q+D+
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPG--AKELRRVCS----DRLRTLQLDV 57

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 180
           +  + + +      QW+ +      +  L+NNAGIL        L  + Y + M  N  G
Sbjct: 58  TKPEQIKR----AAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFG 113

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
              +TK  LPLL+ +    R+VNV+S   R  F                    P    Y 
Sbjct: 114 TVEVTKAFLPLLRRA--KGRVVNVSSMGGRVPF--------------------PAGGAYC 151

Query: 241 YSKLCLLIFSYELHRNL---GLDKSRHVSVIAADPGVVKTNI 279
            SK  +  FS  L R L   G+     VS+I   PG  KT I
Sbjct: 152 ASKAAVEAFSDSLRRELQPWGV----KVSIIE--PGNFKTGI 187

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 66.3 bits (161), Expect = 2e-12
 Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 31/228 (13%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAF 119
           +K  V +VTGA+ G+G A A  L+ +G  V +  G       ET+ +I S    A   + 
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF--SI 59

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTN 177
             +L S   V     SL   L +    +   +LINNAGI   A     T + +D+M+S N
Sbjct: 60  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 119

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
               FF+ +  L  L+++   SRI+N++S   R           I+   F+         
Sbjct: 120 AKAPFFIIQQALSRLRDN---SRIINISSAATR-----------ISLPDFI--------- 156

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
            Y  +K  +   ++ L + LG   +R ++V A  PG +KT++  E+ S
Sbjct: 157 AYSMTKGAINTMTFTLAKQLG---ARGITVNAILPGFIKTDMNAELLS 201

Length = 252

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           I R V ++TGA++G+G A A A +R G  VVL+ R    L    A+I +   +A   A  
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEA--LAVV 63

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNY 178
            D++  ++V    D  ++ L        I   +NNA   +      +TPE + ++    Y
Sbjct: 64  ADVADAEAVQAAADRAEEEL------GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTY 117

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           +G    T   L  ++       I+ V S
Sbjct: 118 LGVVHGTLAALRHMRPR-DRGAIIQVGS 144

Length = 334

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTG T GLGAA A A +  G   +V+ GR++       A++ +    A     Q DL
Sbjct: 8   VALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVF--VQADL 65

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGA 181
           S  +     +  +       +    +  L+N AG+    + L  +PE +D+  + N    
Sbjct: 66  SDVEDC---RRVVAAAD---EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAP 119

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           FFL +  + L++       IVN+ S
Sbjct: 120 FFLMQEAIKLMRRRKAEGTIVNIGS 144

Length = 260

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 64.9 bits (159), Expect = 4e-12
 Identities = 53/225 (23%), Positives = 89/225 (39%), Gaps = 50/225 (22%)

Query: 66  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 125
            +VTGAT G+G A A  L++ GF+V+L+ R+   L     +I  +      +    D S+
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYG-VETKTIAADFSA 62

Query: 126 FQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNYIG 180
              + +  +  L+   LD      I +L+NN GI  +          +    +++ N + 
Sbjct: 63  GDDIYERIEKELEG--LD------IGILVNNVGISHSIPEYFLETPEDELQDIINVNVMA 114

Query: 181 AFFLTKLLLPLLKNSPVPSR----IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 236
              +T+L+LP +       R    IVN++SF                          P  
Sbjct: 115 TLKMTRLILPGMV-----KRKKGAIVNISSFA----------------------GLIPTP 147

Query: 237 R--IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 279
               Y  SK  L  FS  L+      KS+ + V +  P +V T +
Sbjct: 148 LLATYSASKAFLDFFSRALYEEY---KSQGIDVQSLLPYLVATKM 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 65.3 bits (160), Expect = 4e-12
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA SG+G   A AL++EG  VV+   +    +     +      A      +D++
Sbjct: 6   VALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAI--GVAMDVT 63

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
             +++      +   +   +    + +L+NNAGI  +A       E + +M++    GAF
Sbjct: 64  DEEAI---NAGIDYAV---ETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAF 117

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
             TK  LP++K      RI+N+ S
Sbjct: 118 LTTKAALPIMKAQGG-GRIINMAS 140

Length = 258

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 64.7 bits (158), Expect = 6e-12
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 19/155 (12%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL--------LSETMADITSRNKDAR 115
            V  VTGA+ G+G A A  L++ G  VV+  +++          L  T+ +     + A 
Sbjct: 4   KVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAG 63

Query: 116 LEAF--QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-TP-EGYD 171
            +A    VD+     V     +L +  +  D    + +L+NNAG +  S    TP + +D
Sbjct: 64  GQALPIVVDVRDEDQV----RALVEATV--DQFGRLDILVNNAGAIWLSLVEDTPAKRFD 117

Query: 172 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            M   N  G + L++  LP +  +     I+N++ 
Sbjct: 118 LMQRVNLRGTYLLSQAALPHMVKAGQG-HILNISP 151

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 7e-12
 Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 34/220 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+GAA A A +REG  V L    + L     A I      AR+ A   D++
Sbjct: 9   VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT 68

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
              SV     ++       +    + +L+NNAGI   A    +T E + +  + +  GA+
Sbjct: 69  DAASV---AAAVAA---AEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAW 122

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
              + +LP +      S IVN+ S TH                F +   C+P    Y  +
Sbjct: 123 NGCRAVLPGMVERGRGS-IVNIAS-TH---------------AFKIIPGCFP----YPVA 161

Query: 243 KLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMR 281
           K  LL     L R LG++  +R+V V A  PG ++T +  
Sbjct: 162 KHGLL----GLTRALGIEYAARNVRVNAIAPGYIETQLTE 197

Length = 260

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 7e-12
 Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 38/223 (17%)

Query: 66  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 125
           C VTGA SG+G A A  L+ +G  + L  R +  L++T+AD  +       E   +D+S 
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTV-PEHRALDISD 61

Query: 126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFF 183
           + +V  F   +         H S+ +++N AGI A  T  RLT E + +M+  N +G   
Sbjct: 62  YDAVAAFAADIHA------AHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIH 115

Query: 184 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 243
           + +  +P +  +     +VNV+S                 G   L     P    Y  SK
Sbjct: 116 VIETFVPPMVAAGRGGHLVNVSS---------------AAGLVAL-----PWHAAYSASK 155

Query: 244 LCLLIFSYELHRNLGLDKSRH---VSVIAADPGVVKTNIMREV 283
             L   S E+ R    D +RH   VSV+   PG VKT ++  V
Sbjct: 156 FGLRGLS-EVLR---FDLARHGIGVSVVV--PGAVKTPLVNTV 192

Length = 272

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 64.4 bits (157), Expect = 8e-12
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGA+ G+G A A      G  V++V R +  L++   ++     +  +     D+S  
Sbjct: 13  LITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVS-- 70

Query: 127 QSVLKFKDSLQQWLLD--SDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 182
                  D  ++ +LD   D    + +L+NNAG     + +  T + +  +  TN   AF
Sbjct: 71  ------DDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAF 124

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
            L++   PLLK     S IVN+ S
Sbjct: 125 ELSRYAHPLLKQHA-SSAIVNIGS 147

Length = 257

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 43/261 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA---RLEAFQV 121
           V IVTGA+ G+GAA A  L+ +GF V +    ++  S   AD      +A   R  A Q 
Sbjct: 7   VAIVTGASRGIGAAIARRLAADGFAVAV----NYAGSAAAADELVAEIEAAGGRAIAVQA 62

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 179
           D++   +V +  D+ +           I +L+NNAG+  L T +    E +D+ ++TN  
Sbjct: 63  DVADAAAVTRLFDAAETAF------GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLR 116

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
           GAF + +     L       RI+N+++                           P    Y
Sbjct: 117 GAFVVLREAARHLGQG---GRIINLSTSVIALPL--------------------PGYGPY 153

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG 299
             SK  +    + L   L     R ++V A  PG V T +     S   +     L  L 
Sbjct: 154 AASKAAVEGLVHVLANELR---GRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLE 210

Query: 300 LLQSPEKGINSVLDAALAPPE 320
            L +PE+   +V  A LA P+
Sbjct: 211 RLGTPEEIAAAV--AFLAGPD 229

Length = 245

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 13/145 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA+SG+G A A A +  G  VVL  RS+  L E   ++  R       A   D++
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV--RELGGEAIAVVADVA 59

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 181
               V +  D+  +          I   +NNAG+ A   R    TPE + ++   NY+G 
Sbjct: 60  DAAQVERAADTAVERF------GRIDTWVNNAGV-AVFGRFEDVTPEEFRRVFDVNYLGH 112

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
            + T   LP L+       ++NV S
Sbjct: 113 VYGTLAALPHLRRR-GGGALINVGS 136

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +VTGA  G+G+A A  L  +G+ V+    S +  ++   +     +D ++   ++D++
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTED-QVRLKELDVT 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
             +   +    +++          + +L+NNAGI   S   R++ + ++ +++TN    F
Sbjct: 63  DTEECAEALAEIEE------EEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVF 116

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 218
            +T+ L   +       RI+N++S         Q N
Sbjct: 117 NVTQPLFAAMCEQGY-GRIINISSVNGLKGQFGQTN 151

Length = 245

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 20/143 (13%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSS 125
           +VTGA  G+G A   AL++ G  VV V R       T AD+ S  +    +E   VDLS 
Sbjct: 11  LVTGAGKGIGRATVKALAKAGARVVAVSR-------TQADLDSLVRECPGIEPVCVDLSD 63

Query: 126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAFF 183
           + +  +   S             + LL+NNA   IL     +T E +D+    N      
Sbjct: 64  WDATEEALGS----------VGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIH 113

Query: 184 LTKLLLPLLKNSPVPSRIVNVTS 206
           +++++   +    VP  IVNV+S
Sbjct: 114 VSQIVARGMIARGVPGSIVNVSS 136

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 63.4 bits (154), Expect = 1e-11
 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 16/151 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDL 123
           + +VTGA+ G+G  AA   +R G  V+L+GR+   L +    I        +     +  
Sbjct: 6   IILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLT 65

Query: 124 SSFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNY 178
            + ++  +    +      LD  +H        NAG+L      S   P+ +  +   N 
Sbjct: 66  CTSENCQQLAQRIAVNYPRLDGVLH--------NAGLLGDVCPLSEQNPQVWQDVXQVNV 117

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH 209
              F LT+ LLPLL  S   S +   TS + 
Sbjct: 118 NATFMLTQALLPLLLKSDAGSLV--FTSSSV 146

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 14/144 (9%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITSRNKDARLEAFQVDLSS 125
           +VTG + G+G A A  L+  G  VV+  R S   + E  A+I       +    + D+S 
Sbjct: 2   LVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEI--EELGGKAVVVRADVSQ 59

Query: 126 FQSVLK-FKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGAF 182
            Q V + F    +++         + +L++NA  G     S LTP  +D  M+TN     
Sbjct: 60  PQDVEEMFAAVKERF-------GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALV 112

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
              +    L++      RIV ++S
Sbjct: 113 HCAQQAAKLMRERG-GGRIVAISS 135

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 63/269 (23%), Positives = 100/269 (37%), Gaps = 48/269 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVG----RSSHLLSETMADITSRNKDARLEAFQ 120
             ++TG + GLG A A  L+ +G  V+++     R         A I +    A   AF 
Sbjct: 8   RVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFD 67

Query: 121 V-DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTN 177
           V D ++ ++ L             +    + +L+NNAGI   A  + L+ E +D ++  N
Sbjct: 68  VRDFAATRAALD---------AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVN 118

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
             G F +T+  LP +  +    RIVN+ S         QVN                   
Sbjct: 119 LDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVN------------------- 159

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL 297
            Y  SK  L+  +  L   L     R ++V A  PG + T +              +L  
Sbjct: 160 -YAASKAGLIGLTKTLANELA---PRGITVNAVAPGAINTPMADNAA-----PTEHLLNP 210

Query: 298 --LGLLQSPEKGINSVLDAALAPPETSGV 324
             +  L  P++    V  A L     S V
Sbjct: 211 VPVQRLGEPDEVAALV--AFLVSDAASYV 237

Length = 249

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 32/211 (15%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 127
           +TG++ GLG AAA  L  +G  VVL  RS    ++  A                DLSS  
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAAC-----PGAAGVLIGDLSSLA 66

Query: 128 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTP-EGYDQMMSTNYIGAFFLTK 186
              K  D         +       +I+NAGIL+  +R TP  G   M++ N +  + LT 
Sbjct: 67  ETRKLAD-------QVNAIGRFDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTA 119

Query: 187 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCL 246
           L+         P R++ ++S  HR        N ++       ++    +  Y  SKL +
Sbjct: 120 LIRR-------PKRLIYLSSGMHRGG------NASLDD-IDWFNRGENDSPAYSDSKLHV 165

Query: 247 LIFSYELHRNLGLDKSRHVSVIAADPGVVKT 277
           L  +  + R     + + VS  A  PG V T
Sbjct: 166 LTLAAAVAR-----RWKDVSSNAVHPGWVPT 191

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 13/146 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V  +TG   GLG A A  L+  G  V L+GR +  LS+T+  +        L    +DL 
Sbjct: 9   VVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVP----ADALRIGGIDLV 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAF 182
             Q+  +  D + +          +  L+N AG     T +    + +D+M   N     
Sbjct: 65  DPQAARRAVDEVNR------QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTL 118

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFT 208
             +K  LP L  S    RIVN+ +  
Sbjct: 119 NASKAALPALTASGG-GRIVNIGAGA 143

Length = 239

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 69/293 (23%), Positives = 109/293 (37%), Gaps = 52/293 (17%)

Query: 63  RPVCIVTGATSGLGAAAAYAL-----SREGFHVVLVGRSSHLLSETMADITSRNKDAR-- 115
           R V +VTGA SGLG A    L           ++L  R+          + + + DAR  
Sbjct: 1   RKVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVV 60

Query: 116 LEAFQVDLSSFQSVLKFKDSLQQ---------------------WL------LDSDMHS- 147
            +   VDLS+  SV      L++                     W+      L + + + 
Sbjct: 61  FDYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAV 120

Query: 148 -SIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            +    I   G+L+   + T +G  ++  TN  G ++L + L PLL  S   S+I+  +S
Sbjct: 121 TNPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSS 180

Query: 207 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS 266
                  NA     ++     L+         Y  SK  + + S  L+R         V 
Sbjct: 181 ------LNASPKYFSLEDIQHLKGP-----APYSSSKYLVDLLSLALNRKF---NKLGVY 226

Query: 267 VIAADPGVVKTNIMRE-VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 318
                PG+  TN+    +P F   +A  +  LL  L SP   I S  + A A 
Sbjct: 227 SYVVHPGICTTNLTYGILPPFTWTLALPLFYLLRRLGSPWHTI-SPYNGAEAL 278

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 4e-11
 Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
           +RP  ++TGA+ G+GAA A  L+     ++L GR +  L E  A++           F V
Sbjct: 2   ERPTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELPG------ATPFPV 54

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 179
           DL+  +++           ++      + +L++NAG+  L   +  T + +   +  N +
Sbjct: 55  DLTDPEAI--------AAAVEQLGR--LDVLVHNAGVADLGPVAESTVDEWRATLEVNVV 104

Query: 180 GAFFLTKLLLPLLK 193
               LT+LLLP L+
Sbjct: 105 APAELTRLLLPALR 118

Length = 227

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 62.1 bits (151), Expect = 5e-11
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA +GLG   A  L+  G  +V  GRS    SET   + +     R  +   DLS
Sbjct: 7   VALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALG--RRFLSLTADLS 62

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
             +++        + L+DS  +    I +L+NNAGI+  A +   + + +D +M+ N   
Sbjct: 63  DIEAI--------KALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKS 114

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
            FFLT+             +I+N+ S
Sbjct: 115 VFFLTQAAAKHFLKQGRGGKIINIAS 140

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 61.8 bits (150), Expect = 6e-11
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 12/149 (8%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
           K  V ++TG  SGLG A A  L++EG  + LV  +   L    A +     DA +   + 
Sbjct: 2   KDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKA 61

Query: 122 DLSSFQSVLKFKD-SLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTN 177
           D+S    V  + D +++Q+         I    NNAGI      +     + +D+++S N
Sbjct: 62  DVSDEAQVEAYVDATVEQF-------GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSIN 114

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
             G F+  + +L +++       IVN  S
Sbjct: 115 LRGVFYGLEKVLKVMREQGS-GMIVNTAS 142

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 7e-11
 Identities = 65/270 (24%), Positives = 104/270 (38%), Gaps = 71/270 (26%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF--QVD 122
           V +VTG  +G+G A A A +REG  VV+  R +    ET+A I    ++A  EA     D
Sbjct: 9   VALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALI----REAGGEALFVACD 64

Query: 123 LSSFQSVLKFKDSLQQWLLDSDM--HSSIQLLINNAGILATSSRL---TPEGYDQMMSTN 177
           ++        +D+  + L++  +  +  +    NNAGI     RL   +   +D +M  N
Sbjct: 65  VT--------RDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVN 116

Query: 178 YIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 236
             G +   K  +P +L                      A VN  ++ G         P  
Sbjct: 117 VKGVWLCMKYQIPLMLAQGG-----------------GAIVNTASVAGLGAA-----PKM 154

Query: 237 RIYEYSKLCLLIFSYELHRNLGLDKS-------RHVSVIAADPGVVKTNIMR-------E 282
            IY  SK          H  +GL KS       + + V A  P V+ T++ R        
Sbjct: 155 SIYAASK----------HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPR 204

Query: 283 VPSFLSLMAFTVLKLLGLLQSPEKGINSVL 312
              F + M       +G +   E+  ++VL
Sbjct: 205 KAEFAAAM-----HPVGRIGKVEEVASAVL 229

Length = 253

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 62.9 bits (154), Expect = 8e-11
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 16/158 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G A A  L+ EG  VVL            A++   +   R      D++
Sbjct: 424 VALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD---RALGVACDVT 480

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 181
              +V   + + ++  L       + ++++NAGI A S  +   + E + +    N  G 
Sbjct: 481 DEAAV---QAAFEEAALA---FGGVDIVVSNAGI-AISGPIEETSDEDWRRSFDVNATGH 533

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN 219
           F + +  + ++K   +   IV + S   +N  N   N 
Sbjct: 534 FLVAREAVRIMKAQGLGGSIVFIAS---KNAVNPGPNF 568

Length = 681

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 61.0 bits (149), Expect = 8e-11
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 14/138 (10%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDLSSF 126
           VTGA  G+G  AA   +R G  V+L+GR+   L     +I +       +    +  ++ 
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATP 76

Query: 127 QSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIGA 181
           Q+  +  D++++    LD  +H        NAG+L       +  PE +  +M  N    
Sbjct: 77  QNYQQLADTIEEQFGRLDGVLH--------NAGLLGELGPMEQQDPEVWQDVMQVNVNAT 128

Query: 182 FFLTKLLLPLLKNSPVPS 199
           F LT+ LLPLL  SP  S
Sbjct: 129 FMLTQALLPLLLKSPAAS 146

Length = 247

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 22/149 (14%)

Query: 60  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 119
           G+K  V IVTG + G+G A    L  EG +V+                        ++ F
Sbjct: 3   GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE-------------PSYNDVDYF 49

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTPEG-YDQMMSTN 177
           +VD+S+ + V+K  D +         +  I +L+NNAGI +  +     E  +D++++ N
Sbjct: 50  KVDVSNKEQVIKGIDYV------ISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVN 103

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
             G F ++K  +P +        I+N+ S
Sbjct: 104 VNGIFLMSKYTIPYMLKQDKGV-IINIAS 131

Length = 258

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           ++  V +VTG +SG+G A    L   G  V + GR    L+   A +  +   ARL A +
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNY 178
            D+     V  F  +++      DM      L+NNAG   ++T +  T + +   +   Y
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDM------LVNNAGQGRVSTFADTTDDAWRDELELKY 119

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
                 T+  LPLL+ S   S IV V S
Sbjct: 120 FSVINPTRAFLPLLRASAAAS-IVCVNS 146

Length = 265

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 9/144 (6%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+SG+G A A  L+  G +VV+  RS    +E + +   +    +  A Q D+S
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEI-KAVGGKAIAVQADVS 63

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
             + V+    S  +         ++ +L+NNAG+   A+S  +T E +++++  N  G F
Sbjct: 64  KEEDVVALFQSAIKEF------GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQF 117

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
              +  +   + S +  +I+N++S
Sbjct: 118 LCAREAIKRFRKSKIKGKIINMSS 141

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 11/131 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TGA+SG+G AAA   +REG  VV+  R    L + +A+I +   +A   A  V   
Sbjct: 8   VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDE 67

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGA 181
           ++   L          L  +    + +  NNAG L      + ++ EG+ + ++TN   A
Sbjct: 68  AYAKALV--------ALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSA 119

Query: 182 FFLTKLLLPLL 192
           F   K  +P +
Sbjct: 120 FLGAKHQIPAM 130

Length = 254

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 15/150 (10%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
             V I+TGA+ G+G A A  L+R G  +VL  R+   L+    ++     +A       D
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEAL--VVPTD 58

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGILATS---SRLTPEGYDQMMSTNY 178
           +S  ++        ++ +  +      I +L+NNAGI   S          ++++M  NY
Sbjct: 59  VSDAEAC-------ERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNY 111

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 208
           +GA + T   LP LK S    +IV V+S  
Sbjct: 112 LGAVYCTHAALPHLKAS--RGQIVVVSSLA 139

Length = 263

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 19/142 (13%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTGA+SG+G A A AL++ G  VV   R         A +     +   E  ++D+   
Sbjct: 13  LVTGASSGIGRACAVALAQRGARVVAAAR-------NAAALDRLAGETGCEPLRLDVGD- 64

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFL 184
                  D+  +  L +    +   L+N AGI  L ++  +T EG+D++M+ N  GA  +
Sbjct: 65  -------DAAIRAALAA--AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALV 115

Query: 185 TKLLLPLLKNSPVPSRIVNVTS 206
            + +   +  +     IVNV+S
Sbjct: 116 ARHVARAMIAAGRGGSIVNVSS 137

Length = 245

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 11/91 (12%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGA+ G+GAAAA A + EG H+ LV R +  L    AD+ + +    +    +DLSS 
Sbjct: 11  LITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSS- 68

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 157
                  ++ +Q   ++     I +L+NNAG
Sbjct: 69  ------PEAREQLAAEAG---DIDILVNNAG 90

Length = 259

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 54/226 (23%), Positives = 82/226 (36%), Gaps = 43/226 (19%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTG   GLG A A  L  EG  VVL            A++      AR   F +D++
Sbjct: 7   VAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDA---ARF--FHLDVT 61

Query: 125 SFQSVLKFKDSLQQWLLDSDM----HSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNY 178
                         W    D        + +L+NNAGIL   T    T E + +++  N 
Sbjct: 62  ----------DEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINL 111

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
            G F  T+ ++P +K +   S I+N++S             E + G         P    
Sbjct: 112 TGVFLGTRAVIPPMKEAGGGS-IINMSSI------------EGLVGD--------PALAA 150

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           Y  SK  +   +              + V +  PG + T +  E+ 
Sbjct: 151 YNASKGAVRGLTKSAALECATQGYG-IRVNSVHPGYIYTPMTDELL 195

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 58.7 bits (142), Expect = 4e-10
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 19/128 (14%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++ GAT G+G A A AL+  G+ ++L GR +  L+   A++ +  + A + A     +  
Sbjct: 2   LILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARPADVAAELEVWALA 61

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFL 184
           Q +                   + LL+  AG +     +R  P  + +++  N  GA  +
Sbjct: 62  QEL-----------------GPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALV 104

Query: 185 TKLLLPLL 192
            K  L LL
Sbjct: 105 LKHALALL 112

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 59.1 bits (143), Expect = 4e-10
 Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 14/152 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHV-VLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           + +VTG + G+G A A  L++EG+ V V   ++ H   E +  IT     A     Q D+
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAF--VLQADI 60

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIG 180
           S    V+    ++ Q          +  L+NNAGIL    T   LT E  ++++STN  G
Sbjct: 61  SDENQVVAMFTAIDQ------HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTG 114

Query: 181 AFFLTKLLLP--LLKNSPVPSRIVNVTSFTHR 210
            F   +  +    LK+      IVNV+S   R
Sbjct: 115 YFLCCREAVKRMALKHGGSGGAIVNVSSAASR 146

Length = 247

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 59.4 bits (144), Expect = 4e-10
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 9/144 (6%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG+TSG+G   A AL+  G ++VL G       E +    +     ++     DLS
Sbjct: 4   VALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLS 63

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
              ++       Q           + +L+NNAGI  +A       E +D +++ N    F
Sbjct: 64  KPAAIEDMVAYAQ------RQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVF 117

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
             T+L LP +K      RI+N+ S
Sbjct: 118 HTTRLALPHMKKQGW-GRIINIAS 140

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 60.6 bits (147), Expect = 4e-10
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 10/157 (6%)

Query: 53  RCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK 112
           R +P    + R V  VTG   G+G   A  L+ EG HVVL   +        A+I  +  
Sbjct: 404 RRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFG 463

Query: 113 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEG 169
             R  A ++D++  Q+V   K +     L    +  + +++NNAGI ATSS     T + 
Sbjct: 464 AGRAVALKMDVTDEQAV---KAAFADVALA---YGGVDIVVNNAGI-ATSSPFEETTLQE 516

Query: 170 YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           +   +     G F + +     ++   +   IV + S
Sbjct: 517 WQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIAS 553

Length = 676

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 11/131 (8%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
           +RP  +V GA+SG+GAA A  L+  GF V L  R      E +  I +   +A   AF +
Sbjct: 10  RRPA-LVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAV--AFPL 66

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYI 179
           D++   SV  F    ++          I++L++ AG         ++ E ++  +  + +
Sbjct: 67  DVTDPDSVKSFVAQAEE------ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLV 120

Query: 180 GAFFLTKLLLP 190
           GA  L   +LP
Sbjct: 121 GANRLATAVLP 131

Length = 274

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 58.7 bits (142), Expect = 6e-10
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 20/152 (13%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV--DLS 124
           +VTGA+ G+G A A  L  EG+ V +  R    L+   A               +  D+ 
Sbjct: 4   LVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG-------VLGLAGDVR 56

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
               V +  D++++          +  L+NNAG+  +     LTPE +  ++ TN  GAF
Sbjct: 57  DEADVRRAVDAMEEAF------GGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAF 110

Query: 183 FLT-KLLLPLLKNSPVPSRIVNVTSFTHRNVF 213
           +   K    LL+       IVNV S   +N F
Sbjct: 111 YCIHKAAPALLRRG--GGTIVNVGSLAGKNAF 140

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 58.8 bits (143), Expect = 6e-10
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 11/142 (7%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTGA  G+G A A AL+  G  V  V R+   L E +AD+           +++D++  
Sbjct: 2   LVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRR--YGYPFATYKLDVADS 59

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFL 184
            +V    + +Q+       +  I +L+N AGIL   +   L+ E +    + N  G F +
Sbjct: 60  AAV---DEVVQRLE---REYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNV 113

Query: 185 TKLLLPLLKNSPVPSRIVNVTS 206
           ++ + P +K     + IV V S
Sbjct: 114 SQAVSPRMKRRRSGA-IVTVGS 134

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 58.5 bits (142), Expect = 6e-10
 Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 17/134 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V  V GA  GLGAA A   + EGF V L  R    L   + DI      +   A   D  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAK-AVPTDAR 59

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG------ILATSSRLTPEGYDQMMSTNY 178
               V+   D ++      +    +++L+ NAG      IL T    TP  ++++     
Sbjct: 60  DEDEVIALFDLIE------EEIGPLEVLVYNAGANVWFPILET----TPRVFEKVWEMAA 109

Query: 179 IGAFFLTKLLLPLL 192
            G F   +     +
Sbjct: 110 FGGFLAAREAAKRM 123

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 16/147 (10%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD--ITSRNKDARLEAFQV 121
            V +VTGA   +G A A AL+ EG+ VV+    S   ++ + D     RN        Q 
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAV---LVQA 57

Query: 122 DLSSFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRLTPEG-YDQMMSTNY 178
           DLS F +       + + +           +L+NNA     T      E  + ++   N 
Sbjct: 58  DLSDFAACADLVAAAFRAF-------GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINL 110

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVT 205
              + L +     L  S     I+N+ 
Sbjct: 111 KAPYLLIQAFARRLAGS-RNGSIINII 136

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 10/129 (7%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGA+SG+G A A   ++ G++V L  R +  L E  A++ + N    +E   +D++  
Sbjct: 2   LITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEI--LDVTDE 59

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFL 184
           +                     + L+I NAG+   +S   L+ + + + + TN +GA  +
Sbjct: 60  ERNQL------VIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAI 113

Query: 185 TKLLLPLLK 193
            +  LP  +
Sbjct: 114 LEAALPQFR 122

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 16/148 (10%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
            K  V ++TG T G+G A A A  REG  V ++  S+   ++ +       ++  +   +
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-------REKGVFTIK 57

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 178
            D+ +   V K K+ +++          + +L+NNAGI+          E Y++M+  N 
Sbjct: 58  CDVGNRDQVKKSKEVVEKEF------GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINL 111

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            GA + T   LPLLK S   + IVN+ S
Sbjct: 112 NGAIYTTYEFLPLLKLSKNGA-IVNIAS 138

Length = 255

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 16/158 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG  SG+G A A  L+ EG  VV+      +  E +A+       A     Q D++
Sbjct: 3   VALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIA-EKVAEAAQGGPRAL--GVQCDVT 59

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQMMSTNYIGA 181
           S   V   + + +Q +L+      + ++++NAGI ATSS     + E +++ M  N  G 
Sbjct: 60  SEAQV---QSAFEQAVLE---FGGLDIVVSNAGI-ATSSPIAETSLEDWNRSMDINLTGH 112

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN 219
           F +++    ++K+  +   IV   S   +N      N 
Sbjct: 113 FLVSREAFRIMKSQGIGGNIVFNAS---KNAVAPGPNA 147

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 61/225 (27%), Positives = 87/225 (38%), Gaps = 42/225 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA  G+G A A AL+REG  VV+   ++         I +    A   A QVD+S
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI--AVQVDVS 65

Query: 125 SFQSVLKFKD-SLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTNY 178
              S     D ++  +         I  L+NNA I     L     +  + Y + MS N 
Sbjct: 66  DPDSAKAMADATVSAF-------GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNL 118

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
            GA   T+ +   +        IVN +S                T  +         +  
Sbjct: 119 DGALVCTRAVYKHMAKRG-GGAIVNQSS----------------TAAW-------LYSNF 154

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
           Y  +K+ L   + +L R LG    R V+ IA  PG + T   R V
Sbjct: 155 YGLAKVGLNGLTQQLARELGGMNIR-VNAIA--PGPIDTEATRTV 196

Length = 250

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 9/146 (6%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
             V IVT + SG+G A A  L+++GF + +   S    ++  A+   R+   R E  Q+D
Sbjct: 2   AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV-RSHGVRAEIRQLD 60

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
           LS      +  D L Q L        I +L+NNAG +  A    +  + + ++ + +  G
Sbjct: 61  LSDLPEGAQALDKLIQRL------GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDG 114

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
           AF  +++    +       RI+N+TS
Sbjct: 115 AFLCSQIAARHMVKQGQGGRIINITS 140

Length = 256

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 18/148 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG + GLG   A AL   G  VVL  R +  L E  A + +   DA       D++
Sbjct: 14  TALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDAL--WIAADVA 71

Query: 125 SFQSVLKFKD-SLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
               + +  + +L+++         + +L+NNAG    A +     E +D++M+ N  G 
Sbjct: 72  DEADIERLAEETLERF-------GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGL 124

Query: 182 FFLTKLLLPLLKNSPVP---SRIVNVTS 206
           F L++    + K S +P    RI+NV S
Sbjct: 125 FLLSQ---AVAKRSMIPRGYGRIINVAS 149

Length = 259

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 18/150 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVD 122
             ++TG  SG+G A A A +REG  V +           ET   I    +   L    + 
Sbjct: 28  KALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPGDLG 87

Query: 123 LSSF-QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNY 178
             SF + ++K    ++++         + +L+NNA        +   T E  ++   TN 
Sbjct: 88  DESFCRDLVKE--VVKEF-------GKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNI 138

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 208
              F+LTK  LP LK     S I+N TS T
Sbjct: 139 FSMFYLTKAALPHLKKG---SSIINTTSVT 165

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 28/160 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TG    LG A A  L+R G  V ++ R+       +A+I +   +A   A + D+ 
Sbjct: 12  VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEAL--AVKADVL 69

Query: 125 SFQSVLKFKDS-LQQWLLDSDMHSSIQLLINNAG-------------ILATSSR----LT 166
             +S+ + +   L+ +           +LIN AG              L   ++    L 
Sbjct: 70  DKESLEQARQQILEDF-------GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLD 122

Query: 167 PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            EG++ +   N +G    T++    +      + I+N++S
Sbjct: 123 EEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGN-IINISS 161

Length = 278

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 56.5 bits (136), Expect = 4e-09
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 12/152 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSR----EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           VC+VTGA+ G G   A  L++     G  +VL  R+   L +  A+I +     R+    
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD-----QMMS 175
           +DL +   + +   +L++ L        + LLINNAG L   S+   +  D        +
Sbjct: 62  LDLGAEAGLEQLLKALRE-LPRPKGLQRL-LLINNAGTLGDVSKGFVDLSDSTQVQNYWA 119

Query: 176 TNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTS 206
            N      LT  +L   K+SP +   +VN++S
Sbjct: 120 LNLTSMLCLTSSVLKAFKDSPGLNRTVVNISS 151

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 56.3 bits (136), Expect = 4e-09
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +VTG + G+G   A      G  V++  R +   ++   +++         A   DLS
Sbjct: 8   IVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELS---AYGECIAIPADLS 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
           S + +      +      ++    + +L+NNAG    A        G+D++M  N    F
Sbjct: 65  SEEGIEALVARV------AERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVF 118

Query: 183 FLTKLLLPLLKNSPV---PSRIVNVTS 206
           FLT+ LLPLL+ +     P+R++N+ S
Sbjct: 119 FLTQALLPLLRAAATAENPARVINIGS 145

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 56.1 bits (136), Expect = 5e-09
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 19/148 (12%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
           ++ V +VTGA+SG+G A A  L+ +G+ V    R      + M D+        +    +
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR----VDKMEDL----ASLGVHPLSL 53

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRLTP--EGYDQMMSTNY 178
           D++   S+    D++            I +L+NNAG     +    P  E   Q    N 
Sbjct: 54  DVTDEASIKAAVDTII------AEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQ-FEVNL 106

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            GA  LT+L+LP ++      RI+N++S
Sbjct: 107 FGAARLTQLVLPHMRAQR-SGRIINISS 133

Length = 273

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 55.8 bits (134), Expect = 6e-09
 Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 37/231 (16%)

Query: 58  ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA-DITSRNKDARL 116
           +  +   V IVTG   G+G A   AL++EG  VV+   SS   +E +  ++     D   
Sbjct: 1   MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVY- 59

Query: 117 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMM 174
            A Q D+S  +   +  +         +    + +L+NNAGI    T  +L  E +++++
Sbjct: 60  -AVQADVSKVEDANRLVEEAV------NHFGKVDILVNNAGITRDRTFKKLNREDWERVI 112

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 234
             N    F  T  +LP +  +    RI++++S   +     Q N                
Sbjct: 113 DVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTN---------------- 155

Query: 235 CARIYEYSKLCLLIFSYELHRNLGLDKSR-HVSVIAADPGVVKTNIMREVP 284
               Y  +K  +L F+    ++L L+ ++ +V+V A  PG + T ++ EVP
Sbjct: 156 ----YSAAKAGMLGFT----KSLALELAKTNVTVNAICPGFIDTEMVAEVP 198

Length = 247

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 20/154 (12%)

Query: 60  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 119
            +K  V IVTG  SG+GAA +  L+ EG   V+ GRS+    E   ++ +    A     
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA-PDDEFAEELRALQPRAEF--V 60

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMM 174
           QVDL+         +              I  L+NNAG+     L        E +   +
Sbjct: 61  QVDLTDDAQCRDAVEQTVA------KFGRIDGLVNNAGVNDGVGLEAGR----EAFVASL 110

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 208
             N I  + +    LP LK S     IVN++S T
Sbjct: 111 ERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKT 142

Length = 258

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 7e-09
 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 20/144 (13%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TG TSG+G   A     EG  V + GR    L    A++            + D    
Sbjct: 10  LITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDV 64

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQL--LINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
            +      +L +        +  +L  +  NAG+   A         +D+  +TN  G +
Sbjct: 65  AAQKALAQALAE--------AFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPY 116

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
           FL + LLPLL N   P+ IV   S
Sbjct: 117 FLIQALLPLLAN---PASIVLNGS 137

Length = 249

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 55.5 bits (134), Expect = 8e-09
 Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 25/164 (15%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +K  V ++TG T  LG A A AL++ G  V  +GR+     +   +IT      R  A  
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEIT--ALGGRAIALA 60

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSR------------- 164
            D+    S+ + ++ +           ++ +LIN AG     AT+               
Sbjct: 61  ADVLDRASLERAREEIVAQF------GTVDILINGAGGNHPDATTDPEHYEPETEQNFFD 114

Query: 165 LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 208
           L  EG++ +   N  G+F  +++    +      S I+N++S  
Sbjct: 115 LDEEGWEFVFDLNLNGSFLPSQVFGKDMLEQKGGS-IINISSMN 157

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 9e-09
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 11/123 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTG  +GLG   A AL++ G  +++    ++   ET   I    +  ++   QVDL+
Sbjct: 17  VAIVTGGNTGLGQGYAVALAKAGADIIITTHGTN-WDETRRLIEKEGR--KVTFVQVDLT 73

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 182
             +S  K            +    I +L+NNAG +  +  L    E ++ +M  N    +
Sbjct: 74  KPESAEKVVKEAL------EEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVY 127

Query: 183 FLT 185
            L+
Sbjct: 128 HLS 130

Length = 258

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 15  VCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKR--PVCIVTGAT 72
           +C V+  +   LW + L       + +  F   +  Y   + P   +K+     +VTG T
Sbjct: 3   LCFVDKLKSQPLWLLVLFVLGSLSILKFFFTILNWVYVYFLRPAKNLKKYGSWALVTGPT 62

Query: 73  SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS--FQSVL 130
            G+G   A+ L+R+G ++VLV R+   L +    I S+    +++   VD S    + V 
Sbjct: 63  DGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVK 122

Query: 131 KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMS----TNYIGAFFLTK 186
           + K++++   LD      + +LINN G+    +R   E  ++++      N  G   +T+
Sbjct: 123 RIKETIEG--LD------VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQ 174

Query: 187 LLLP-LLKNSPVPSRIVNVTS 206
            +LP +LK       I+N+ S
Sbjct: 175 AVLPGMLKRK--KGAIINIGS 193

Length = 320

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 31/145 (21%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGA SG+G A A A   +G  V  V +          D    + +      Q+DLS  
Sbjct: 9   LITGAASGIGLAQARAFLAQGAQVYGVDKQ---------DKPDLSGN--FHFLQLDLSDD 57

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFF 183
              L             D   S+ +L N AGIL         + E +  +  TN    F 
Sbjct: 58  LEPLF------------DWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFL 105

Query: 184 LTKLLLP--LLKNSPVPSRIVNVTS 206
           LT+  LP  L + S +   I+N+ S
Sbjct: 106 LTRAYLPQMLERKSGI---IINMCS 127

Length = 235

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 34/222 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDL 123
           V I+TGA  G+G A A  L+ +GF++VL           T+ +I+         A   D+
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISE--AGYNAVAVGADV 61

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGA 181
           +    V    D   +         S  +++NNAGI   +  L  T E   ++ + N  G 
Sbjct: 62  TDKDDVEALIDQAVE------KFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGV 115

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
            F  +      K      +I+N +S               I G      + +P    Y  
Sbjct: 116 LFGIQAAARQFKKLGHGGKIINASS---------------IAGV-----QGFPNLGAYSA 155

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
           SK  +   +    + L     + ++V A  PG+VKT +   +
Sbjct: 156 SKFAVRGLTQTAAQELA---PKGITVNAYAPGIVKTEMWDYI 194

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 28/146 (19%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
            VTGA  G+G A A A    G  V+   ++               +D     F +D+S  
Sbjct: 12  WVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL-----------TQEDYPFATFVLDVSDA 60

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFF 183
            +V       Q+ L +      + +L+N AGIL   AT S L+ E + Q  + N  GAF 
Sbjct: 61  AAV---AQVCQRLLAE---TGPLDVLVNAAGILRMGATDS-LSDEDWQQTFAVNAGGAFN 113

Query: 184 LTKLLLPLLKNSPVPSR---IVNVTS 206
           L + ++P  +      R   IV V S
Sbjct: 114 LFRAVMPQFR----RQRSGAIVTVGS 135

Length = 252

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 22/145 (15%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TG +SG+G  AA  L R G+ V+   R          D  +R          +DL   
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACRK--------PDDVARMNSLGFTGILLDLDDP 57

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTNYIGA 181
           +SV +  D +   L D+ ++     L NNAG      L+T SR   +  +Q  STN+ G 
Sbjct: 58  ESVERAADEVIA-LTDNRLYG----LFNNAGFGVYGPLSTISR---QQMEQQFSTNFFGT 109

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
             LT LLLP +       RIV  +S
Sbjct: 110 HQLTMLLLPAMLPHG-EGRIVMTSS 133

Length = 256

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 67/288 (23%), Positives = 109/288 (37%), Gaps = 62/288 (21%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TGA  G+G   A   +R G +++L+  S  +  +   ++  R    R  A   D+ 
Sbjct: 8   TALITGALQGIGEGIARVFARHGANLILLDISPEIE-KLADELCGR--GHRCTAVVADVR 64

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
              SV    K +        +    I +L+NNAG+  L +   ++ E  D  +  N  G 
Sbjct: 65  DPASVAAAIKRA-------KEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGV 117

Query: 182 FFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
           + +TK +LP ++       RIV ++S T   V +     ET                 Y 
Sbjct: 118 WNVTKAVLPEMIARK--DGRIVMMSSVTGDMVADP---GET----------------AYA 156

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT----NIMREV-----PSFLSLMA 291
            +K  ++  +  L           + V A  PG V+T    +I R+       S L+ MA
Sbjct: 157 LTKAAIVGLTKSLAVEYA---QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMA 213

Query: 292 -----------FTVLKLLGLLQSPEK----GINSVLDAALAPPETSGV 324
                        V +L   L S E     G  +V+D     PET  V
Sbjct: 214 KAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSV 261

Length = 263

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 15/143 (10%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ-VDLSSF 126
           +TGA SGLG A A   +REG+ + L   +     ET+  +     D     +Q  D+  +
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDG---FYQRCDVRDY 61

Query: 127 QSVLKFKDSL-QQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFF 183
             +     +  ++W         I +++NNAG+ +      L+ E +D  ++ N +G   
Sbjct: 62  SQLTALAQACEEKW-------GGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVK 114

Query: 184 LTKLLLPLLKNSPVPSRIVNVTS 206
             K  LPL K      RIVN+ S
Sbjct: 115 GCKAFLPLFKRQKS-GRIVNIAS 136

Length = 270

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 41/225 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G A A  L  +GF V +V  +          ++     A   A + D+S
Sbjct: 4   VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAI--AVKADVS 61

Query: 125 S----FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNY 178
                F +V +  D+        D++    +++NNAG+  T+    +T E +D++ + N 
Sbjct: 62  DRDQVFAAVRQVVDTF------GDLN----VVVNNAGVAPTTPIETITEEQFDKVYNINV 111

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
            G  +  +      K      +I+N TS          V N  +               +
Sbjct: 112 GGVIWGIQAAQEAFKKLGHGGKIINATSQA------GVVGNPELA--------------V 151

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
           Y  +K  +   +    R+L    S  ++V A  PG+VKT +M ++
Sbjct: 152 YSSTKFAVRGLTQTAARDLA---SEGITVNAYAPGIVKTPMMFDI 193

Length = 256

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 13/148 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL----VGRSSHLLSETMADITSRNKDARLEAFQ 120
           V +VTGA  GLG A A A +  G  VV+      R     S + AD      D    A  
Sbjct: 7   VVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVV---DEIKAAGG 63

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 178
             ++++ SV +  + + +  +D+     + +L+NNAGIL   S  +++ E +D +M  + 
Sbjct: 64  KAVANYDSV-EDGEKIVKTAIDA--FGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHL 120

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            G+F +T+   P ++      RI+N +S
Sbjct: 121 KGSFKVTRAAWPYMRKQKF-GRIINTSS 147

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 18/144 (12%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 127
           +TGA SG+G A A   + EG+ V     +   L+   A++ + N         +D++   
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGN----AWTGALDVTD-- 59

Query: 128 SVLKFKDSLQQWLLDSDMHSS--IQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAF 182
                + +    L D    +   + +L NNAGIL           E +D+++  N  G  
Sbjct: 60  -----RAAWDAALADFAAATGGRLDVLFNNAGIL-RGGPFEDIPLEAHDRVIDINVKGVL 113

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
                 LP LK +P  +R++N +S
Sbjct: 114 NGAHAALPYLKATP-GARVINTSS 136

Length = 260

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 35/160 (21%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTG  SGLG A    L  +G  VV++    S   +                   VD+
Sbjct: 4   VAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGD-------NCRFVPVDV 56

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---------TPEGYDQMM 174
           +S + V       +           + +++N AGI A +++          + E + +++
Sbjct: 57  TSEKDVKAALALAK------AKFGRLDIVVNCAGI-AVAAKTYNKKGQQPHSLELFQRVI 109

Query: 175 STNYIGAFFLTKLLLPLL-KNSP-------VPSRIVNVTS 206
           + N IG F + +L    + KN P       V   I+N  S
Sbjct: 110 NVNLIGTFNVIRLAAGAMGKNEPDQGGERGV---IINTAS 146

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 52.6 bits (126), Expect = 7e-08
 Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 43/254 (16%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +K    IVTG   G+G A     + EG  V +   +     +  ADI  R K    +AF 
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI--RAKGGNAQAFA 58

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNY 178
            D++   SV     + +Q L   D      +L+NNAG       ++  P  ++++++ N 
Sbjct: 59  CDITDRDSVDTAVAAAEQALGPVD------VLVNNAGWDKFGPFTKTEPPLWERLIAINL 112

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
            GA  +   +LP +       RIVN+ S   R   + +                     +
Sbjct: 113 TGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSGEA--------------------V 151

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREV------PSFLSLMA 291
           Y   K  L+ FS  + R      +RH ++V    PG   T ++ ++      P  L   A
Sbjct: 152 YAACKGGLVAFSKTMAREH----ARHGITVNVVCPGPTDTALLDDICGGAENPEKL-REA 206

Query: 292 FTVLKLLGLLQSPE 305
           FT    LG L  P+
Sbjct: 207 FTRAIPLGRLGQPD 220

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 52.5 bits (126), Expect = 7e-08
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 13/148 (8%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
             V +VTGATSG+G A A  L +EG  V +  R    L+ T+ ++  R      +    D
Sbjct: 3   SEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKEL--REAGVEADGRTCD 60

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
           + S   +     +          +  I +L+NNAG      ++ L  E +  ++ TN  G
Sbjct: 61  VRSVPEIEALVAAAV------ARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTG 114

Query: 181 AFFLTKLLLPL--LKNSPVPSRIVNVTS 206
            F +TK +L    +       RI+N+ S
Sbjct: 115 VFRVTKEVLKAGGMLERGT-GRIINIAS 141

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 21/134 (15%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +K  V ++TG   GLG A A  L+++G  + L+  +   L E +A+  +   + R   + 
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVR--GYA 60

Query: 121 VDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL-----------ATSSRLTPE 168
            +++  + V   F    + +         +  LINNAGIL             +S+++ E
Sbjct: 61  ANVTDEEDVEATFAQIAEDF-------GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLE 113

Query: 169 GYDQMMSTNYIGAF 182
            +  ++  N  G F
Sbjct: 114 QFQSVIDVNLTGVF 127

Length = 253

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 52.4 bits (126), Expect = 7e-08
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 18/149 (12%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           IK    +VTGA  G+G A   +L   G   V           + A + ++  D ++   +
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRD---PGSAAHLVAKYGD-KVVPLR 56

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD---QMMSTN 177
           +D++  +S+                   + ++INNAG+L  ++ L     +   Q M  N
Sbjct: 57  LDVTDPESIKAAAAQA----------KDVDVVINNAGVLKPATLLEEGALEALKQEMDVN 106

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
             G   L +   P+LK +     IVN+ S
Sbjct: 107 VFGLLRLAQAFAPVLKANG-GGAIVNLNS 134

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 10/128 (7%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
              V +V G    LGA   + L+ EG+ V +   +S   +    +I +   +     F  
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTP---EGYDQMMSTNY 178
           D +S QSVL     +       ++   + LL+ NAGI A ++ +T      +D+ +  N 
Sbjct: 61  DATSEQSVLALSRGVD------EIFGRVDLLVYNAGI-AKAAFITDFQLGDFDRSLQVNL 113

Query: 179 IGAFFLTK 186
           +G F   +
Sbjct: 114 VGYFLCAR 121

Length = 259

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 52.5 bits (126), Expect = 8e-08
 Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 31/140 (22%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGA SG+GAA A  L   G  V+ +                   D R      DLS+ 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGI-------------------DLREADVIADLSTP 43

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK 186
           +       ++   L        +  L+N AG+  T+          ++  NY G   L +
Sbjct: 44  EGR---AAAIADVLARCS--GVLDGLVNCAGVGGTT------VAGLVLKVNYFGLRALME 92

Query: 187 LLLPLLKNSPVPSRIVNVTS 206
            LLP L+    P   V V+S
Sbjct: 93  ALLPRLRKGHGP-AAVVVSS 111

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 8e-08
 Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-----DARL 116
              V +VTGA+SG+G A A  L+R G+ V   G             TSRN         +
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRV--FG-------------TSRNPARAAPIPGV 47

Query: 117 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMM 174
           E  ++D++   SV     +    ++       I +L+NNAG+     +   +      + 
Sbjct: 48  ELLELDVTDDASV----QAAVDEVIARA--GRIDVLVNNAGVGLAGAAEESSIAQAQALF 101

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            TN  G   +T+ +LP ++ +    RI+N++S
Sbjct: 102 DTNVFGILRMTRAVLPHMR-AQGSGRIINISS 132

Length = 270

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 12/126 (9%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
             V I+TG +SG+G A A   + EG +VV+ GR+   L E   +I       ++   Q+D
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ--FPGQVLTVQMD 58

Query: 123 LSSFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYI 179
           + + + V K  +   +++         I  LINNA    +  +  L+  G++ ++     
Sbjct: 59  VRNPEDVQKMVEQIDEKF-------GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLN 111

Query: 180 GAFFLT 185
           G F+ +
Sbjct: 112 GTFYCS 117

Length = 252

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 16/130 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +VTGAT+G G        ++G  V+  GR    L E   ++        L   Q+D+ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVR 56

Query: 125 SFQSVLKFKDSL-QQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 180
           +  ++ +   SL  +W        +I +L+NNAG+   L  + + + E ++ M+ TN  G
Sbjct: 57  NRAAIEEMLASLPAEW-------RNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKG 109

Query: 181 AFFLTKLLLP 190
             ++T+ +LP
Sbjct: 110 LVYMTRAVLP 119

Length = 248

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 41/225 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG   G+G   A  L+++GF V +   +     ET  +I      A   A+++D+S
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAV--AYKLDVS 59

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 182
               V    D   +     D      +++NNAG+   +  L  T E   ++ + N  G  
Sbjct: 60  DKDQVFSAIDQAAEKFGGFD------VMVNNAGVAPITPILEITEEELKKVYNVNVKGVL 113

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI----TGKFFLRSKCYPCARI 238
           F  +      K      +I+N  S            N  +    + KF +R      A+ 
Sbjct: 114 FGIQAAARQFKKQGHGGKIINAASIA------GHEGNPILSAYSSTKFAVRGLTQTAAQ- 166

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
                        EL         + ++V A  PG+VKT +  E+
Sbjct: 167 -------------EL-------APKGITVNAYCPGIVKTPMWEEI 191

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 24/168 (14%)

Query: 48  SNPYKRCVPPITGIKRP-VCIVTGATSGLGAAAAYALSREGFHVVLV---GRSSHLLSET 103
           S P      P    + P V  +TG   G+G A A   +  G  ++++      +  L+E 
Sbjct: 253 SGPASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEA 312

Query: 104 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LA 160
           + D           + Q D++   +V      +Q           + +L+NNAGI     
Sbjct: 313 LGD--------EHLSVQADITDEAAVESAFAQIQARW------GRLDVLVNNAGIAEVFK 358

Query: 161 TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 208
            S   + E + ++   N  GAF   +    L+    V   IVN+ S  
Sbjct: 359 PSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGV---IVNLGSIA 403

Length = 520

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TG ++GLG A A    +E   VV+  RS    +  +A+   +       A + D++
Sbjct: 9   VVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAE-EIKKAGGEAIAVKGDVT 67

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIG 180
               V+         L+ +      ++ ++INNAGI     S  ++ E ++++++TN  G
Sbjct: 68  VESDVVN--------LIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTG 119

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
           AF  ++  +       +   I+N++S
Sbjct: 120 AFLGSREAIKYFVEHDIKGNIINMSS 145

Length = 261

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 22/158 (13%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
           R V I+TGA+ G+GAA A   +  G+ V L    +   +E +     R +     A   D
Sbjct: 2   RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI-RRQGGEALAVAAD 60

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM--------M 174
           ++    VL+  +++ + L        +  L+NNAGIL    RL     +QM         
Sbjct: 61  VADEADVLRLFEAVDREL------GRLDALVNNAGILEAQMRL-----EQMDAARLTRIF 109

Query: 175 STNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHR 210
           +TN +G+F   +  +  +  ++      IVNV+S   R
Sbjct: 110 ATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR 147

Length = 248

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 13/124 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA SG+G A A     EG  VV+             +I        L+       
Sbjct: 8   VALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV--TRQD 65

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
           S   ++    +++++         I +L NNA +  +A    ++ + YD++ + N  G F
Sbjct: 66  SIDRIVAA--AVERF-------GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLF 116

Query: 183 FLTK 186
           FL +
Sbjct: 117 FLMQ 120

Length = 257

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 51.1 bits (122), Expect = 2e-07
 Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 39/214 (18%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTGA+ G+G   A  L  +G  V L G     L    A++  R K      F  +LS  
Sbjct: 10  LVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVK-----IFPANLSDR 64

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAFFL 184
             V       +  L        + +L+NNAGI       R++ E +D ++  N    F L
Sbjct: 65  DEVKALGQKAEADL------EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRL 118

Query: 185 TKLLL-PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 243
           T+ L  P+++      RI+N+TS               +TG         P    Y  SK
Sbjct: 119 TRELTHPMMRRR--YGRIINITSVV------------GVTGN--------PGQANYCASK 156

Query: 244 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 277
             ++ FS  L + +    +R+V+V    PG +++
Sbjct: 157 AGMIGFSKSLAQEIA---TRNVTVNCVAPGFIES 187

Length = 245

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 30/152 (19%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS--- 124
           +TGA  GLG A A  ++ +G  V             + DI   N  A L+AF  +++   
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKV------------FLTDI---NDAAGLDAFAAEINAAH 48

Query: 125 ----SFQSVLKFKDSLQQW--LLD--SDMHSSIQLLINNAGI--LATSSRLTPEGYDQMM 174
               +F +V    D   QW  LL   +D    + +L+NNAG+       ++  + + ++M
Sbjct: 49  GEGVAFAAVQDVTDE-AQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVM 107

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           + N    F   K  LP L+ S  P+ IVN++S
Sbjct: 108 AINVESIFLGCKHALPYLRASQ-PASIVNISS 138

Length = 251

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 29/155 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV--- 121
           V ++TG  SG+G A A   ++EG  + +V    +L     A+ T +    R+E   V   
Sbjct: 48  VALITGGDSGIGRAVAVLFAKEGADIAIV----YLDEHEDANETKQ----RVEKEGVKCL 99

Query: 122 ----DLSSFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQM 173
               D+S       F KD++++ + +      + +L+NNA           +T E  D+ 
Sbjct: 100 LIPGDVSDEA----FCKDAVEETVRE---LGRLDILVNNAAFQYPQQSLEDITAEQLDKT 152

Query: 174 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 208
             TN    F +TK  LP LK     S I+N  S T
Sbjct: 153 FKTNIYSYFHMTKAALPHLKQG---SAIINTGSIT 184

Length = 290

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 18/148 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  GLGAA A A +  G  V++  R+   L E    I +  + A + A   DL+
Sbjct: 12  VAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVA--ADLA 69

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG------ILATSSRLTPEGYDQMMSTNY 178
             ++       L    +++     + +++NN G      +L+TS++   + +    + N 
Sbjct: 70  HPEAT----AGLAGQAVEA--FGRLDIVVNNVGGTMPNPLLSTSTKDLADAF----TFNV 119

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
             A  LT   +PL+        ++N++S
Sbjct: 120 ATAHALTVAAVPLMLEHSGGGSVINISS 147

Length = 263

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA SG+G   A  L+R G  V +   +    +    +I       +     +D++
Sbjct: 9   TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG--GKAIGVAMDVT 66

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
           +  +V    D + +         S+ +L++NAGI  +      +   + +M + +  GAF
Sbjct: 67  NEDAVNAGIDKVAERF------GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAF 120

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
             TK  L  +        ++ + S
Sbjct: 121 LTTKAALKHMYKDDRGGVVIYMGS 144

Length = 262

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 58/239 (24%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDL 123
           + +VTGA+ G+G   A  L   G  V + GR+    L  T  +I +R    +    + D 
Sbjct: 5   IALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARG--GKCIPVRCDH 62

Query: 124 SSFQSVLKFKDSL---QQWLLDSDMHSSIQLLINNA-----GILATSSR----LTPEGYD 171
           S    V    + +   QQ  LD        +L+NNA      IL   ++      P  +D
Sbjct: 63  SDDDEVEALFERVAREQQGRLD--------ILVNNAYAAVQLILVGVAKPFWEEPPTIWD 114

Query: 172 QMMST----NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS-FTHRNVFNAQVNNETITGKF 226
            + +     +Y  + +   L++   K       IV ++S      +FN            
Sbjct: 115 DINNVGLRAHYACSVYAAPLMVKAGK-----GLIVIISSTGGLEYLFNVA---------- 159

Query: 227 FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
                       Y   K  +   + ++   L   K   V+V++  PG V+T ++ E+P 
Sbjct: 160 ------------YGVGKAAIDRMAADMAHEL---KPHGVAVVSLWPGFVRTELVLEMPE 203

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 49.4 bits (119), Expect = 4e-07
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 14/115 (12%)

Query: 67  IVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITS-RNKDARLEAFQVDLS 124
           +VTG   GLG   A  L+  G  H+VL+ RS     E  A +     + A +     D+S
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 125 SFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMS 175
                   +D+++  L  + +D    ++ +I+ AG+L  +  + +T E + ++++
Sbjct: 64  D-------RDAVRALLAEIRADGP-PLRGVIHAAGVLRDALLANMTAEDFARVLA 110

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.4 bits (124), Expect = 4e-07
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 28/151 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL--VGRSSHLLSETMADITSRNKDARLEAFQVD 122
           V +VTGA  G+GAA A  L+R+G HVV   V  +   L+     +          A  +D
Sbjct: 212 VALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-------GGTALALD 264

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTN 177
           +++  +  +  + L      ++ H  + ++++NAGI     LA    +    +D +++ N
Sbjct: 265 ITAPDAPARIAEHL------AERHGGLDIVVHNAGITRDKTLA---NMDEARWDSVLAVN 315

Query: 178 YIGAFFLTKLLLP--LLKNSPVPSRIVNVTS 206
            +    +T+ LL    L +     RIV V+S
Sbjct: 316 LLAPLRITEALLAAGALGDGG---RIVGVSS 343

Length = 450

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 39/163 (23%)

Query: 60  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT-SRNKDARLEA 118
            ++  + IVTG +SG+G A    L   G +VV             ADI     +    + 
Sbjct: 6   NLQGKIIIVTGGSSGIGLAIVKELLANGANVV------------NADIHGGDGQHENYQF 53

Query: 119 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-----TPEG---- 169
              D+SS + V      + +          I  L+NNAGI     RL      P G    
Sbjct: 54  VPTDVSSAEEVNHTVAEIIE------KFGRIDGLVNNAGI--NIPRLLVDEKDPAGKYEL 105

Query: 170 ----YDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTS 206
               +D+M + N  G F +++ +   +  ++  V   IVN++S
Sbjct: 106 NEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGV---IVNMSS 145

Length = 266

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 15/96 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G   A   + EG  VVLV RS  L+ E  A++ +   +A   A   DL 
Sbjct: 10  VVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEAL--ALTADLE 66

Query: 125 SF---QSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 157
           ++   Q+ +             +    I +LINN G
Sbjct: 67  TYAGAQAAMAAA---------VEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 28/155 (18%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
              V ++TG    +GAA A  L   G+ V +    S   ++ +A   +  +     A Q 
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 122 DLSSFQSVLKF-KDSLQQW-LLDSDMHSSIQLLINNAGILATSS-------RLTPEGYDQ 172
           DL    ++ +     +  +  LD         L+NNA     SS        +T   +D 
Sbjct: 65  DLLDPDALPELVAACVAAFGRLD--------ALVNNA-----SSFYPTPLGSITEAQWDD 111

Query: 173 MMSTNYIGAFFLTKLLLPLLKNSPVPSR--IVNVT 205
           + ++N    FFL++   P L+      R  IVN+T
Sbjct: 112 LFASNLKAPFFLSQAAAPQLR----KQRGAIVNIT 142

Length = 249

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 24/156 (15%)

Query: 56  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR 115
             + G    V  +TG   G+G A A AL+  G  V +      L  ET A++        
Sbjct: 1   DDLRG---KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------L 51

Query: 116 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQM 173
           +    +D++   S   F D++            I +L+NNAG++     L        ++
Sbjct: 52  VVGGPLDVTDPASFAAFLDAV------EADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRI 105

Query: 174 MSTNYIGAFFLTKLLLPLLKNSPVPSR---IVNVTS 206
           +  N  G    +KL  P +    VP     +VNV S
Sbjct: 106 LDVNVYGVILGSKLAAPRM----VPRGRGHVVNVAS 137

Length = 273

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTG + G+G A A AL+  G  V ++  S+    E   ++  +    + +A++ D+S
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKY-GVKTKAYKCDVS 68

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 182
           S +SV   + + +Q  +  D    I +LI NAGI      L  T E +++++  N  G F
Sbjct: 69  SQESV---EKTFKQ--IQKD-FGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVF 122

Query: 183 F 183
            
Sbjct: 123 N 123

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 49.5 bits (119), Expect = 6e-07
 Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 24/152 (15%)

Query: 59  TGIKRPVCIVTGATSGLGAA-AAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLE 117
             IK  V +VTGA  G+G A     L+R    V    R      E++ D+       R+ 
Sbjct: 2   MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP----ESVTDL-----GPRVV 52

Query: 118 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMM 174
             Q+D++   SV     +  +   D      + +L+NNAGI  T S L     +     M
Sbjct: 53  PLQLDVTDPASV----AAAAEAASD------VTILVNNAGIFRTGSLLLEGDEDALRAEM 102

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            TNY G   + +   P+L  +     IVNV S
Sbjct: 103 ETNYFGPLAMARAFAPVLAANG-GGAIVNVLS 133

Length = 238

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 50.5 bits (121), Expect = 6e-07
 Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 10/129 (7%)

Query: 66  CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
            ++TG   GLG   A  L+  G  H+VL+ R              R   AR+   + D++
Sbjct: 153 YLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVT 212

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
              ++      L            +  +I+ AG+L  A  + LTP  +  +++    GA 
Sbjct: 213 DPAALAALLAELAA-------GGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGAL 265

Query: 183 FLTKLLLPL 191
            L +L   L
Sbjct: 266 NLHELTPDL 274

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.8 bits (119), Expect = 7e-07
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 22/153 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDL 123
           V +VTGA +GLG A A  L+R G  VV+   +S L  S+ + +I  R   A+  A   D+
Sbjct: 14  VAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEI--RAAGAKAVAVAGDI 71

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR----LTPEGYDQMMSTNYI 179
           S   +     D L   +  +     + +++NNAGI  T  R    ++ E +D +++ +  
Sbjct: 72  SQRATA----DEL---VATAVGLGGLDIVVNNAGI--TRDRMLFNMSDEEWDAVIAVHLR 122

Query: 180 GAFFLTKLLLPLLK------NSPVPSRIVNVTS 206
           G F LT+      +        PV  RIVN +S
Sbjct: 123 GHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSS 155

Length = 306

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 12/146 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTG++ G+G A A  L+ EG+ + +   RS     ET  +I +  + A   A + ++
Sbjct: 6   VALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKA--LAVKANV 63

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGA 181
              + +   K+   Q     +    + + +NNA  G+L  +  L    +D  M+ N    
Sbjct: 64  GDVEKI---KEMFAQID---EEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKAL 117

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSF 207
            F  +    L++      +I++++S 
Sbjct: 118 LFCAQEAAKLMEKVG-GGKIISLSSL 142

Length = 250

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 32/154 (20%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK--------------D 113
           +TGA+ G+G A A   +R+G +VV+  +++    +    I +  +              D
Sbjct: 8   ITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPCIVD 67

Query: 114 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA-GILATSSRLTP-EGYD 171
            R E  QV  +  ++V KF                I +L+NNA  I  T +  TP + YD
Sbjct: 68  IRDED-QVRAAVEKAVEKF--------------GGIDILVNNASAISLTGTLDTPMKRYD 112

Query: 172 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT 205
            MM  N  G +  +K  LP LK S  P  I+N++
Sbjct: 113 LMMGVNTRGTYLCSKACLPYLKKSKNP-HILNLS 145

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 19/150 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+ GLGAA A + +REG  VV+    ++  S   A+  +     R  A Q D+ 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVV----NYYRSTESAEAVAAEAGERAIAIQADVR 57

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--------LATSSRLTPEGYDQMMST 176
               V    +  +           +  ++NNA I          T   +  E Y Q +  
Sbjct: 58  DRDQVQAMIEEAKNHF------GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEG 111

Query: 177 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
              GA  L + +LP  K      R++N+ +
Sbjct: 112 AVKGALNLLQAVLPDFKERGS-GRVINIGT 140

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 23/159 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G   A  L+ EG  V+LV RS  L+ E +A+I +            DL 
Sbjct: 6   VVVVTGAAQGIGRGVAERLAGEGARVLLVDRSE-LVHEVLAEILAAG--DAAHVHTADLE 62

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAG--ILATSSRLTPEGYDQMMST---N 177
           ++           Q ++ +  +    + +LINN G  I A       E  +Q+ +    +
Sbjct: 63  TYAGA--------QGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEE--EQIEAEIRRS 112

Query: 178 YIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNA 215
                +  + +LP +L+       IVNV+S   R ++  
Sbjct: 113 LFPTLWCCRAVLPHMLERQ--QGVIVNVSSIATRGIYRI 149

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 14/146 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVD 122
           + +VTG   G+G A    L+++G+ V     +     E                   + D
Sbjct: 2   IALVTGGMGGIGTAICQRLAKDGYRVA---ANCGPNEERAEAWLQEQGALGFDFRVVEGD 58

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
           +SSF+S       ++  L        I +L+NNAGI   AT  ++T E +  ++ TN   
Sbjct: 59  VSSFESCKAAVAKVEAEL------GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNS 112

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
            F +T+ ++  ++      RI+N++S
Sbjct: 113 VFNVTQPVIDGMRERGW-GRIINISS 137

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 46/236 (19%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAF 119
           +K  V +VTG+  G+G A A  L++EG  VV+   + +  ++ET+  +     +      
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG--V 61

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQM 173
             D+S+ +       +        D +    +L+NNAG+      L    +L     D+ 
Sbjct: 62  LADVSTREGCETLAKATI------DRYGVADILVNNAGLGLFSPFLNVDDKLI----DKH 111

Query: 174 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 233
           +ST++    + ++ L   ++       IVN+ S               + G      +  
Sbjct: 112 ISTDFKSVIYCSQELAKEMREG---GAIVNIAS---------------VAG-----IRPA 148

Query: 234 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL 289
               IY   K  ++     L + L L+ +  + V A  PG VKT +   +   L +
Sbjct: 149 YGLSIYGAMKAAVI----NLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGM 200

Length = 252

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 47.9 bits (114), Expect = 3e-06
 Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 14/154 (9%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHV-VLVGRSSHLLSETMADITSRNKDARLEAFQV 121
           R V ++TGA+ G+G A A   +  G+ V +   R +    ET   +  R    R      
Sbjct: 2   RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAG 59

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQ---MMSTNY 178
           D+++   V+   D++Q           +  L+NNAGI+A S  L      +   M  TN 
Sbjct: 60  DVANEADVIAMFDAVQSAF------GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNV 113

Query: 179 IGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHR 210
           +GA+   +     L          IVNV+S   R
Sbjct: 114 LGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR 147

Length = 248

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 127
           +TGA+SG+G A A   +R+G  + LV R +  L    A      K AR+  +  D+    
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAA---RLPKAARVSVYAADVRDAD 63

Query: 128 SVLKF-KDSLQQWLLDSDMHSSIQLLINNAGILATSSR--LTPEGYD-----QMMSTNYI 179
           ++     D +         H    ++I NAGI    S   LT E  D     ++M TNY 
Sbjct: 64  ALAAAAADFIAA-------HGLPDVVIANAGI----SVGTLTEEREDLAVFREVMDTNYF 112

Query: 180 G 180
           G
Sbjct: 113 G 113

Length = 257

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 12/148 (8%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
           + V +   A +G+G+A A     EG  VV+       L ET  ++ +     R+EA   D
Sbjct: 18  KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCD 77

Query: 123 LSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 178
           ++S   V          L+D+  +    + +L+NNAG+   +    +T + + +++    
Sbjct: 78  VTSEAQV--------DALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTL 129

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            G F  T+  L  ++       IVN  S
Sbjct: 130 TGTFRATRAALRYMRARGHGGVIVNNAS 157

Length = 262

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 50/236 (21%), Positives = 82/236 (34%), Gaps = 69/236 (29%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGR---SSHLLSETM--------ADITSRNKD 113
           V IVTG  + +GAA A AL   G  V +V     +   ++ ++         DIT    D
Sbjct: 8   VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD---D 64

Query: 114 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEG 169
           A +E       +  +V+                  + +L+N A         SSR     
Sbjct: 65  AAIER------AVATVV-------------ARFGRVDILVNLACTYLDDGLASSR---AD 102

Query: 170 YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLR 229
           +   +  N + A  L +   P L        IVN TS +                     
Sbjct: 103 WLAALDVNLVSAAMLAQAAHPHLARG--GGAIVNFTSIS--------------------- 139

Query: 230 SKCYPCAR-IYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMREV 283
           +K     R +Y  SK  +     +L R++ +D     + V +  PG   + +M E+
Sbjct: 140 AKFAQTGRWLYPASKAAIR----QLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDEL 191

Length = 261

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 21/142 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL------VGRSSHLLSETMADI--TSRNKDA-- 114
           V  +TGA  G G A A  L+ EG  ++       +         T  D+  T+R  +A  
Sbjct: 5   VAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALG 64

Query: 115 -RLEAFQVDLSSFQSVLKFKDSLQQWLLDS-DMHSSIQLLINNAGIL--ATSSRLTPEGY 170
            ++ A + D+            ++  + D  +    + +++ NAG+L    S  L+ E +
Sbjct: 65  RKVLARKADVRDL-------AEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQW 117

Query: 171 DQMMSTNYIGAFFLTKLLLPLL 192
           D ++  N  G +   K ++P +
Sbjct: 118 DTVLDINLTGVWRTCKAVVPHM 139

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 46.8 bits (111), Expect = 7e-06
 Identities = 53/227 (23%), Positives = 86/227 (37%), Gaps = 60/227 (26%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV------GRSSHLLSETMA-----DITSRNKD 113
             ++TG+  G+G A A A  REG  V +        R++       A     D+T +   
Sbjct: 5   TALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTDQASI 64

Query: 114 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYD 171
            R  A  VD               +W        SI +L+NNA +  LA    +T E YD
Sbjct: 65  DRCVAALVD---------------RW-------GSIDILVNNAALFDLAPIVDITRESYD 102

Query: 172 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 231
           ++ + N  G  F+ + +   +       +I+N+ S   R         E + G +     
Sbjct: 103 RLFAINVSGTLFMMQAVARAMIAQGRGGKIINMASQAGR-------RGEALVGVY----- 150

Query: 232 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKT 277
           C   A +   ++            + GL+  RH ++V A  PGVV  
Sbjct: 151 CATKAAVISLTQ------------SAGLNLIRHGINVNAIAPGVVDG 185

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 44/226 (19%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA SG G A A   +  G  +VL       L   +A++ ++   A +   + D+S
Sbjct: 8   VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG--AEVLGVRTDVS 65

Query: 125 SFQSVLKFKDSLQQWLLDSDMHS--SIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 179
               V        + L D+ +    ++ LL NNAG+      +   +   ++ ++  N  
Sbjct: 66  DAAQV--------EALADAALERFGAVHLLFNNAGV-GAGGLVWENSLADWEWVLGVNLW 116

Query: 180 GAFFLTKLLLPLL--KNSPVPSR---IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 234
           G     +   PL+       P+    IVN  S     +                     P
Sbjct: 117 GVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA--GLLAP------------------P 156

Query: 235 CARIYEYSKLCLLIFSYELHRNLGLDKSR-HVSVIAADPGVVKTNI 279
              IY  SK  ++  +  L+++L L   +   SV+   P  V T I
Sbjct: 157 AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC--PYFVPTGI 200

Length = 287

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 18/134 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA SG G   A   ++EG  VV+      + ++    + +   +A + A Q D++
Sbjct: 7   VAIVTGAGSGFGEGIARRFAQEGARVVIA----DINADGAERVAADIGEAAI-AIQADVT 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMH--SSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYI 179
                   +  ++  ++++ +     + +L+NNAGI         +  E +D++ + N  
Sbjct: 62  K-------RADVEA-MVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVK 113

Query: 180 GAFFLTKLLLPLLK 193
             +   + L+P ++
Sbjct: 114 SIYLSAQALVPHME 127

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 46.5 bits (110), Expect = 8e-06
 Identities = 39/154 (25%), Positives = 57/154 (37%), Gaps = 20/154 (12%)

Query: 56  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA- 114
             ++       +VTGA+ GLG   A A +  G  V+LV R    L +    I        
Sbjct: 2   ATLSD---KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEP 58

Query: 115 ---RLEAFQVDLSSF-QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGY 170
              R +    +   F Q      ++ Q   LD  +H         AG     S L  +  
Sbjct: 59  FAIRFDLMSAEEKEFEQFAATIAEATQG-KLDGIVHC--------AGYFYALSPLDFQTV 109

Query: 171 DQMMST---NYIGAFFLTKLLLPLLKNSPVPSRI 201
            + ++    N +    LT+ L PLLK SP  S I
Sbjct: 110 AEWVNQYRINTVAPMGLTRALFPLLKQSPDASVI 143

Length = 239

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 9e-06
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 13/130 (10%)

Query: 56  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR 115
           PP+T +   V +VTGA  G+GA  A  L   G  + LV      L+   A++   ++   
Sbjct: 2   PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLT 61

Query: 116 LEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT--PEGYDQ 172
           + A   DL++ Q+  +   +              I +++ NAGI +  S     P+ + +
Sbjct: 62  VVADVTDLAAMQAAAEEAVERF----------GGIDVVVANAGIASGGSVAQVDPDAFRR 111

Query: 173 MMSTNYIGAF 182
           ++  N +G F
Sbjct: 112 VIDVNLLGVF 121

Length = 296

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +K  + ++TGA+ G+G A A A ++ G  +V    +  L+ + +A       +A    + 
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAH--GYV 65

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNY 178
            D++    V      +++          I +L+NNAGI+     L  + E + Q++  + 
Sbjct: 66  CDVTDEDGVQAMVSQIEK------EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDL 119

Query: 179 IGAFFLTKLLLP 190
              F ++K ++P
Sbjct: 120 NAPFIVSKAVIP 131

Length = 265

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 16/116 (13%)

Query: 68  VTGATSGLGAA-AAYALSREGFHVVLVGRSS-HLLSETMADITSRNKD--ARLEAFQVDL 123
           VTG   G+G A A     R G  +VL+GRS      E  A   +  +   AR+     D+
Sbjct: 210 VTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISADV 269

Query: 124 SSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMS 175
           +   +V        + LL+   + + +I  +I+ AG+L  +   + T E ++ +++
Sbjct: 270 TDAAAV--------RRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLA 317

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 18/142 (12%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           IVTGA  G+G A A  L + G  V+ +     LL E             L    +D++  
Sbjct: 2   IVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLE---------YGDPLRLTPLDVADA 52

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFL 184
            +V   ++   + L +   H  I  L+N AG+L    +  L+ E ++Q  + N  G F L
Sbjct: 53  AAV---REVCSRLLAE---HGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNL 106

Query: 185 TKLLLPLLKNSPVPSRIVNVTS 206
            + + P +K+    + IV V S
Sbjct: 107 LQAVAPHMKDRRTGA-IVTVAS 127

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 22/150 (14%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
               ++TG +SG G A A A    G  VV   RS        AD  + + D R  A  +D
Sbjct: 4   MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS----EAARADFEALHPD-RALARLLD 58

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIG 180
           ++ F ++       +           I +L+NNAG                +    N  G
Sbjct: 59  VTDFDAIDAVVADAE------ATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFG 112

Query: 181 AFFLTKLLLPLLKNSPVPSR----IVNVTS 206
           A  +TK +LP ++     +R    IVN+TS
Sbjct: 113 AVAMTKAVLPGMR-----ARRRGHIVNITS 137

Length = 277

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 32/169 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDL 123
           V  VTGA SG+G   A  L++ G  V L   R+   L+ET   I +  + A       D+
Sbjct: 10  VAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRA--IQIAADV 67

Query: 124 SSFQS----VLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTN 177
           +S       V + +  L           ++ L +N AGI     +  +  E +  +M  N
Sbjct: 68  TSKADLRAAVARTEAEL----------GALTLAVNAAGIANANPAEEMEEEQWQTVMDIN 117

Query: 178 YIGAFFLTK----LLLPLLKNSPVPSRIVNVTSFT----HRNVFNAQVN 218
             G F   +     +L     S     IVN+ S +    +R +  A  N
Sbjct: 118 LTGVFLSCQAEARAMLENGGGS-----IVNIASMSGIIVNRGLLQAHYN 161

Length = 254

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 13/148 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + ++TGA   +G A   AL   G  ++L   ++  L +   ++T+  K  R+ A ++D++
Sbjct: 4   IILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYK-NRVIALELDIT 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRL---TPEGYDQMMSTNYI 179
           S +S+ +  +S        +    I +LINNA        SR      E ++++++ N  
Sbjct: 63  SKESIKELIESYL------EKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLG 116

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSF 207
           GAF  ++  + L K     S I+N+ S 
Sbjct: 117 GAFLCSQAFIKLFKKQGKGS-IINIASI 143

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 25/145 (17%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTGAT G+G A +  L+  G  V+ + RS+               D   E F  DL+  
Sbjct: 7   LVTGATKGIGLALSLRLANLGHQVIGIARSA-------------IDDFPGELFACDLADI 53

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMST---NYIGAFF 183
           +       +L Q      + +    ++NN GI A    L       +      N   A  
Sbjct: 54  EQT---AATLAQINEIHPVDA----IVNNVGI-ALPQPLGKIDLAALQDVYDLNVRAAVQ 105

Query: 184 LTKLLLPLLKNSPVPSRIVNVTSFT 208
           +T+  L  +K      RIVN+ S  
Sbjct: 106 VTQAFLEGMKLREQ-GRIVNICSRA 129

Length = 234

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTG++ G+G A A  L++ G  V+L GR    L+     +  +   A   AF  D++  
Sbjct: 14  LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAF--DVTDH 71

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAFF 183
            +V    D+ +           I +L+NNAG+   +       + +++++ TN    F+
Sbjct: 72  DAVRAAIDAFEA------EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFY 124

Length = 255

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 22/147 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++T A  G+G A A A +REG +V+    +   L E         +   +    +D++
Sbjct: 4   VALITAAAQGIGRAIALAFAREGANVIATDINEEKLKEL-------ERGPGITTRVLDVT 56

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 182
             + V        +          I +L N AG +   S L    + +D  M+ N    +
Sbjct: 57  DKEQVAALAKEEGR----------IDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMY 106

Query: 183 FLTKLLLP-LLKNSPVPSRIVNVTSFT 208
            + K +LP +L        I+N++S  
Sbjct: 107 LMIKAVLPKMLARK--DGSIINMSSVA 131

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSS--H-----LLSETMADITSRNKDARLEAF 119
            +TGA+ G+G A A   +R+G ++V+  +++  H      +     +I +    A     
Sbjct: 10  FITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQAL--PL 67

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTN 177
             D+     V     ++ + +   +    I + +NNA    L  +     + +D M   N
Sbjct: 68  VGDVRDEDQV---AAAVAKAV---ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQIN 121

Query: 178 YIGAFFLTKLLLPLLKNSPVP 198
             G F +++  LP LK S  P
Sbjct: 122 VRGTFLVSQACLPHLKKSENP 142

Length = 273

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 22/149 (14%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
           +   ++TG +SG+GA  A AL  +G+ V    R          D+ +  +   LEAFQ+D
Sbjct: 4   KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEE-------DV-AALEAEGLEAFQLD 55

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINN-----AGILATSSRLTPEGYDQMMSTN 177
            +  +S+      + Q L  S     +  L NN      G +     L  E        N
Sbjct: 56  YAEPESI---AALVAQVLELSG--GRLDALFNNGAYGQPGAV---EDLPTEALRAQFEAN 107

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           + G   LT+ ++P+++      RIV  +S
Sbjct: 108 FFGWHDLTRRVIPVMRKQG-QGRIVQCSS 135

Length = 277

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 19/66 (28%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           IV GAT  +G A A  LS  G  V+  GRSS                     +QVD++  
Sbjct: 2   IVIGATGTIGLAVAQLLSAHGHEVITAGRSS-------------------GDYQVDITDE 42

Query: 127 QSVLKF 132
            S+   
Sbjct: 43  ASIKAL 48

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 20/146 (13%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           PV ++TG +SG+G A A A    G+ V    R +  +    A        A   A Q+D+
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA--------AGFTAVQLDV 53

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM---MSTNYIG 180
           +   ++ +  + L+        H  + +LINNAG  A    L   G + M     TN   
Sbjct: 54  NDGAALARLAEELEA------EHGGLDVLINNAGYGAMGP-LLDGGVEAMRRQFETNVFA 106

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
              +T+ L PLL+ S     +VN+ S
Sbjct: 107 VVGVTRALFPLLRRS--RGLVVNIGS 130

Length = 274

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 44.1 bits (104), Expect = 4e-05
 Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 37/221 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VT +T G+G A A  L+++G HVV+  R    +   +A +       + E   V   
Sbjct: 12  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATL-------QGEGLSV-TG 63

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGA 181
           +   V K +D  +      ++H  + +L++NA +          T E +D+++  N    
Sbjct: 64  TVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKAT 123

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
             +TK ++P ++     S +V V+S    + F                    P    Y  
Sbjct: 124 ALMTKAVVPEMEKRGGGS-VVIVSSVAAFHPF--------------------PGLGPYNV 162

Query: 242 SKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMR 281
           SK  LL     L +NL  + + R++ V    PG++KT+   
Sbjct: 163 SKTALL----GLTKNLAPELAPRNIRVNCLAPGLIKTSFSS 199

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 10/118 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA+SG+G A A A +R G  +VL  R    L    A+   R   A +     D++
Sbjct: 9   VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAV-AE-ECRALGAEVLVVPTDVT 66

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTP-EGYDQMMSTNYIG 180
               V         +         I + +NN G+ A      TP E ++Q++ TN IG
Sbjct: 67  DADQVKALATQAASFG------GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIG 118

Length = 330

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 26/163 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG + GLGAA A A +REG  VV+    ++  SE  A+  +     R  A Q D++
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVV----NYHQSEDAAEALADELGDRAIALQADVT 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----------TSSRLTPEGYDQMM 174
             + V     +  +          I  ++NNA  LA           +  +T E + Q +
Sbjct: 63  DREQVQAMFATATEHF-----GKPITTVVNNA--LADFSFDGDARKKADDITWEDFQQQL 115

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV 217
             +  GA    +  LP ++      RI+N+ +    N+F   V
Sbjct: 116 EGSVKGALNTIQAALPGMREQGF-GRIINIGT----NLFQNPV 153

Length = 253

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 43.2 bits (102), Expect = 8e-05
 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 11/148 (7%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
              V +V G    LG    + L+  G+ V +   +S   +E +AD  +     +   F  
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSE-NAEKVADEINAEYGEKAYGFGA 59

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGY---DQMMSTNY 178
           D ++ QSV+     + +      +   + LL+ +AGI A S+++T       D+ +  N 
Sbjct: 60  DATNEQSVIALSKGVDE------IFKRVDLLVYSAGI-AKSAKITDFELGDFDRSLQVNL 112

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           +G F   +    L+    +  RI+ + S
Sbjct: 113 VGYFLCAREFSKLMIRDGIQGRIIQINS 140

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +V G +SG+G A A A + EG  V +  RS   L+     +      A +    +D++  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARAL---GGGAPVRTAALDITDE 57

Query: 127 QSVLKF 132
            +V  F
Sbjct: 58  AAVDAF 63

Length = 230

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 9e-05
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 17/147 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +V+G   GLG   A   +R G  VVL  R++  L E  A+I    + A   A   D++
Sbjct: 7   VVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRA--LAVPTDIT 64

Query: 125 SFQSVLKFKDSLQQWLLDSDM--HSSIQLLINNA---GILATSSRLTPEGYDQMMSTNYI 179
                   +D     L+   +     +  L+NNA     +   +      +  ++  N +
Sbjct: 65  D-------EDQCAN-LVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVL 116

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           G   LT+   P L  S     IV + S
Sbjct: 117 GTLRLTQAFTPALAES--GGSIVMINS 141

Length = 258

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TG  +GLG   A  L++ G  +V VG +    ++   +   R    +      DL 
Sbjct: 10  VAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGR----KFHFITADLI 65

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 182
             Q  +   DS+    ++   H  I +LINNAGI+     L    + +D +++ N    F
Sbjct: 66  Q-QKDI---DSIVSQAVEVMGH--IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVF 119

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
           FL++ +           +I+N+ S
Sbjct: 120 FLSQAVAKQFVKQGNGGKIINIAS 143

Length = 251

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 22/145 (15%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-- 125
           +TGA+ G G A   A    G  VV   R     + T+AD+  +  D RL    +D++   
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARD----TATLADLAEKYGD-RLLPLALDVTDRA 62

Query: 126 --FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
             F +V    +              + +++NNAG         +T       + TN+ GA
Sbjct: 63  AVFAAVETAVEHF----------GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGA 112

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
            ++T+ +LP L+       I+ ++S
Sbjct: 113 LWVTQAVLPYLREQR-SGHIIQISS 136

Length = 275

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 18/148 (12%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
               +TGA SG+G   A   +R G+ V L       L+   A++ + N  A      +D+
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAG----ALDV 56

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQL--LINNAGILATSSRLTP---EGYDQMMSTNY 178
           +        + +    L D    +  +L  L NNAG+              +D+M+  N 
Sbjct: 57  TD-------RAAWAAALADFAAATGGRLDALFNNAGVG-RGGPFEDVPLAAHDRMVDINV 108

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            G        LP LK +P  +R++N  S
Sbjct: 109 KGVLNGAYAALPYLKATP-GARVINTAS 135

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 28/151 (18%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR-----LEAFQV 121
           ++TGA SG+G A A A +REG  + L    ++L  E         +DA      ++A   
Sbjct: 59  LITGADSGIGRATAIAFAREGADIAL----NYLPEE--------EQDAAEVVQLIQAEGR 106

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSS---IQLLINNAG---ILATSSRLTPEGYDQMMS 175
              +    LK +   +Q  L          + +L+N AG    +   + +T E +D    
Sbjct: 107 KAVALPGDLKDEAFCRQ--LVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFK 164

Query: 176 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           TN    F+L K  +P L   P  + I+N  S
Sbjct: 165 TNVYAMFWLCKAAIPHL---PPGASIINTGS 192

Length = 300

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 66/255 (25%), Positives = 97/255 (38%), Gaps = 43/255 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR-LEAFQVDL 123
           V IVTG  +G+G A A  L++ G  VV+    S       A I      A  LE      
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA---GILATSSRLTPEGYDQMMSTNYIG 180
              ++V+K   S             I +L+NNA   G       +T E ++     N   
Sbjct: 61  QDLEAVVKATVS---------QFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFS 111

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
           AF L++L  P ++ +   + I+N++S +      ++  N  I                Y 
Sbjct: 112 AFRLSQLCAPHMQKAGGGA-ILNISSMS------SENKNVRIAA--------------YG 150

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLM-AFTVLKL 297
            SK  +   +  L  +LG    R   V A  PG VKT+ +  V  P     M   T L  
Sbjct: 151 SSKAAVNHMTRNLAFDLGPKGIR---VNAVAPGAVKTDALASVLTPEIERAMLKHTPLGR 207

Query: 298 LGLLQSPEKGINSVL 312
           LG    PE   N+ L
Sbjct: 208 LG---EPEDIANAAL 219

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 33/155 (21%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-----DARLEAF 119
           V I+TG  SG+G A A   ++ G  VV+            A++   +      D  +EA 
Sbjct: 6   VAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDVTVEA- 64

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR----LTPEGYDQMMS 175
             D+           +     +       + ++ NNAG+L          + E +++++ 
Sbjct: 65  --DVR----------AAVDTAV--ARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLD 110

Query: 176 TNYIGAFFLTK----LLLPLLKNSPVPSRIVNVTS 206
            N  GAF  TK    +++P  K S     IV+V S
Sbjct: 111 VNVYGAFLGTKHAARVMIPAKKGS-----IVSVAS 140

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 56/235 (23%), Positives = 86/235 (36%), Gaps = 66/235 (28%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT-SRNKDARLEA----F 119
           V ++TG  SG+G A A  L+ EG  VV+             DI     K A  E      
Sbjct: 9   VAVITGGGSGIGLATARRLAAEGATVVV------------GDIDPEAGKAAADEVGGLFV 56

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAG--------ILATSSRLTPEG 169
             D++   +V          L D+  + + S+ +  NNAG        IL T      + 
Sbjct: 57  PTDVTDEDAV--------NALFDTAAETYGSVDIAFNNAGISPPEDDSILNTG----LDA 104

Query: 170 YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN-VFNAQVNNETITGKFFL 228
           + ++   N    +   K  LP +      S I+N  SF        +Q++          
Sbjct: 105 WQRVQDVNLTSVYLCCKAALPHMVRQGKGS-IINTASFVAVMGSATSQIS---------- 153

Query: 229 RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 282
                     Y  SK  +L  S    R LG+  +R  + V A  PG V T +++E
Sbjct: 154 ----------YTASKGGVLAMS----RELGVQFARQGIRVNALCPGPVNTPLLQE 194

Length = 255

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 10/123 (8%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
            R   ++TGA+SGLGA  A   + +G  + L  R +  L E  A++ +R    ++    +
Sbjct: 1   TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAAL 60

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD---QMMSTNY 178
           D++    V +     +  L        +  +I NAGI    +RL    +        TN+
Sbjct: 61  DVNDHDQVFEVFAEFRDEL------GGLDRVIVNAGI-GKGARLGTGKFWANKATAETNF 113

Query: 179 IGA 181
           + A
Sbjct: 114 VAA 116

Length = 248

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 15/152 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA  G+G A A      G  V+ +   +  L+     +     DAR      DL+
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLT 59

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
              S+     +L     +      + +L+ NAG    +S    TP  +    + N   A+
Sbjct: 60  DAASL---AAALANAAAER---GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAY 113

Query: 183 FLTKLLL-PLLKNSPVPSRIVNVTSFTHRNVF 213
              + +L  +LK S     +VN+ S       
Sbjct: 114 LCVEAVLEGMLKRS--RGAVVNIGSVNGMAAL 143

Length = 257

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 26/150 (17%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTG  SG+G AAA A +REG  V +    S+L  E         +DA+     ++    
Sbjct: 53  LVTGGDSGIGRAAAIAYAREGADVAI----SYLPVE--------EEDAQDVKKIIEECGR 100

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS----------RLTPEGYDQMMST 176
           ++VL   D   +    S +H + + L     I+A  +           LT E + +  + 
Sbjct: 101 KAVLLPGDLSDEKFARSLVHEAHKAL-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAI 159

Query: 177 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           N    F+LT+  +PLL   P  + I+  +S
Sbjct: 160 NVFALFWLTQEAIPLL---PKGASIITTSS 186

Length = 294

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 40.7 bits (95), Expect = 6e-04
 Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 38/226 (16%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE-TMADITSRNKDARLEAFQV-DLS 124
           +VTGA+ G+G A A  L+ +GF + +   S    +E  ++ I ++  +ARL  F V D  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
           + +++L+          D   H +   ++ NAGI   A    L+ E +D ++ TN  G +
Sbjct: 62  ACRTLLE---------ADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFY 112

Query: 183 -FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
             +    +P+++      RI+ + S +       QVN                    Y  
Sbjct: 113 NVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRGQVN--------------------YSA 151

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL 287
           +K  L+  +  L   L     R ++V    PG++ T ++ EV   L
Sbjct: 152 AKAGLIGATKALAVELA---KRKITVNCIAPGLIDTEMLAEVEHDL 194

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 14/92 (15%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGA SG G   A  L+R+G +V+   + +  ++   A+   R     L   ++DL+  
Sbjct: 6   LITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTD- 62

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI 158
                  D  Q    D D      +L+NNAGI
Sbjct: 63  -----AIDRAQAAEWDVD------VLLNNAGI 83

Length = 257

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 40.6 bits (95), Expect = 7e-04
 Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 16/147 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTG + G+G     A    G  VV   R              +  ++ L        
Sbjct: 11  VVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEA---------AGQALESELNRAGPGSC 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHS--SIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYI 179
            F      K+   + L+   +     I  L+NNAG      T+   + + +  +++ N I
Sbjct: 62  KFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLI 121

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTS 206
             F  +K  LP L+ S     I+N++S
Sbjct: 122 SYFLASKYALPHLRKS--QGNIINLSS 146

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV-DL 123
           + +VTGA+ G+G A A  L+++G HV++  R           I +    A   A  + ++
Sbjct: 10  IALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM 69

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG-------ILATSSRLTPEGYDQMMST 176
               ++  F    ++       H  + +L+NNA        IL T        + + +  
Sbjct: 70  EQIDAL--FAHIRER-------HGRLDILVNNAAANPYFGHILDTD----LGAFQKTVDV 116

Query: 177 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           N  G FF++     L+K     S IVNV S
Sbjct: 117 NIRGYFFMSVEAGKLMKEQGGGS-IVNVAS 145

Length = 252

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 20/132 (15%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
              ++ GA+ G+G         +G+ V+   R +      +A + +       EA  +D+
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRVIATARDA----AALAALQALGA----EALALDV 53

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL-ATSSRLTP---EGYDQMMSTNYI 179
           +   SV         W LD +   ++   +  AG+    +  + P   E +D +M TN +
Sbjct: 54  ADPASVAGLA-----WKLDGE---ALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVL 105

Query: 180 GAFFLTKLLLPL 191
           G   L  +LLPL
Sbjct: 106 GPMQLLPILLPL 117

Length = 222

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 18/135 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH---LLSETMADITSRNKDARLEAFQ 120
             ++TG   GLG A A  L+  G   +VL+ RS       +  +A++ +    AR+    
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAA--GARVTVVA 59

Query: 121 VDLSSFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMST 176
            D++        +D+L   L  + +     +  +I+ AG+L       LTPE +  +++ 
Sbjct: 60  CDVAD-------RDALAAVLAAIPAVEG-PLTGVIHAAGVLDDGVLASLTPERFAAVLAP 111

Query: 177 NYIGAFFLTKLLLPL 191
              GA+ L +L   L
Sbjct: 112 KAAGAWNLHELTADL 126

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 30/148 (20%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTG T G+GAA    L   G  VV   RS              +    +E    DL++ 
Sbjct: 13  LVTGGTKGIGAATVARLLEAGARVVTTARS-----------RPDDLPEGVEFVAADLTTA 61

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS------RLTPEGYDQMMSTNYIG 180
           +       ++ + L   D      +L++  G   +S+       LT E +   ++ N + 
Sbjct: 62  EGCAAVARAVLERLGGVD------ILVHVLG--GSSAPAGGFAALTDEEWQDELNLNLLA 113

Query: 181 AFFLTKLLLPLL--KNSPVPSRIVNVTS 206
           A  L + LLP +  + S V   I++VTS
Sbjct: 114 AVRLDRALLPGMIARGSGV---IIHVTS 138

Length = 260

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 19/73 (26%), Positives = 32/73 (43%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTG  SG+G   A  L   G  V++VGR+   L+    +I +      +     D++  
Sbjct: 11  LVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE 70

Query: 127 QSVLKFKDSLQQW 139
             V +  D+   W
Sbjct: 71  DQVARAVDAATAW 83

Length = 276

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 18/142 (12%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +K  V ++TG  SGLG A       EG  V ++ RS    +E +A++ +   DA +   +
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRS----AEKVAELRADFGDA-VVGVE 56

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPE-----GYDQM 173
            D+ S       + ++ + +   +    +   I NAGI   S+ L   PE      +D++
Sbjct: 57  GDVRSLAD---NERAVARCV---ERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDEL 110

Query: 174 MSTNYIGAFFLTKLLLPLLKNS 195
              N  G     K  LP L  +
Sbjct: 111 FHINVKGYILGAKAALPALYAT 132

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 38/165 (23%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL--VGRSSHLLS-------ETMADITSRNKDAR 115
           V IVTGA  G+G A A A + EG  VV+  +G      +         + +I +   +A 
Sbjct: 8   VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAV 67

Query: 116 LEAFQVDLSSFQSVLKFKDSLQQW-----LLDS--DMHSSIQLLINNAGILATS--SRLT 166
                             D +  W     L+D+  +    + +L+NNAGIL     + ++
Sbjct: 68  ANG---------------DDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMS 112

Query: 167 PEGYDQMMSTNYIGAFFLTKLLLPLLKN-----SPVPSRIVNVTS 206
            E +D +++ +  G F   +      +        V +RI+N +S
Sbjct: 113 EEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSS 157

Length = 286

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 24/145 (16%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           +VTG++ G+GA  A  L+  G HVV+  R     +  +          R  A   DL+  
Sbjct: 10  LVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVA-EIEAAGGRASAVGADLTDE 68

Query: 127 QSVLKFKDSLQQWLLDSDMHS--SIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 181
           +SV          L+D+       +  L+ NA     S  +     E Y   M  N    
Sbjct: 69  ESV--------AALMDTAREEFGGLDALVLNA-----SGGMESGMDEDY--AMRLNRDAQ 113

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
             L +  LPL+   P  SR+V VTS
Sbjct: 114 RNLARAALPLM---PAGSRVVFVTS 135

Length = 248

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 17/137 (12%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           P  +VTGA   +G++ A AL +EG+ VVL    S   + T+A   +  +       Q DL
Sbjct: 2   PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADL 61

Query: 124 SSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGILATSSRLTPEGYD----------- 171
           S+  ++       +  +           +L+NNA     +  L  +  +           
Sbjct: 62  SNSATLF---SRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQ 118

Query: 172 --QMMSTNYIGAFFLTK 186
             ++  +N I  +FL K
Sbjct: 119 VAELFGSNAIAPYFLIK 135

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 12/144 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG  +GLG   A  L+  G  +V +       +ET+  +T+  +  R  +   DL 
Sbjct: 12  VAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGR--RFLSLTADLR 67

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 182
               +    +              I +L+NNAG++     +  + + +D +M+ N    F
Sbjct: 68  KIDGIPALLERAVAEF------GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVF 121

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
           F+++             +I+N+ S
Sbjct: 122 FMSQAAAKHFIAQGNGGKIINIAS 145

Length = 253

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 51/216 (23%), Positives = 78/216 (36%), Gaps = 41/216 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTG   G+G          G  VV          E  AD     +      F V   
Sbjct: 3   VAIVTGGGHGIGKQICLDFLEAGDKVVFADID----EERGAD---FAEAEGPNLFFVHGD 55

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAF 182
                L  K  +   L   +    I +L+NNA   +    S L  E +D+++S N  G +
Sbjct: 56  VADETLV-KFVVYAML---EKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPY 111

Query: 183 FLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
            L++     L+KN     RI+N+ S      F ++ ++E                  Y  
Sbjct: 112 ELSRYCRDELIKNK---GRIINIAS---TRAFQSEPDSEA-----------------YAA 148

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 277
           SK  L+  ++ L  +LG      + V    PG + T
Sbjct: 149 SKGGLVALTHALAMSLG----PDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	369
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	99.98
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.98
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.98
PRK07102	243	short chain dehydrogenase; Provisional	99.98
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.98
PRK07806	248	short chain dehydrogenase; Provisional	99.98
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK07041	230	short chain dehydrogenase; Provisional	99.98
PRK12829	264	short chain dehydrogenase; Provisional	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
PRK08017	256	oxidoreductase; Provisional	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.96
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.96
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.95
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.94
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.88
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.88
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.87
PLN02653	340	GDP-mannose 4,6-dehydratase	99.86
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.84
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.83
PLN02650	351	dihydroflavonol-4-reductase	99.82
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.82
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.82
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.81
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.81
PRK06720	169	hypothetical protein; Provisional	99.81
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.8
PLN02214	342	cinnamoyl-CoA reductase	99.79
PLN02240	352	UDP-glucose 4-epimerase	99.79
PLN00198	338	anthocyanidin reductase; Provisional	99.78
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.78
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.78
PLN02572	442	UDP-sulfoquinovose synthase	99.77
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.77
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.75
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.75
PLN02686	367	cinnamoyl-CoA reductase	99.75
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.74
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.74
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.73
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.72
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.72
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.72
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.71
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.69
PLN02427	386	UDP-apiose/xylose synthase	99.69
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.65
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.65
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.62
PLN02260	668	probable rhamnose biosynthetic enzyme	99.62
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.62
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.62
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.59
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.57
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.56
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.56
PLN02206	442	UDP-glucuronate decarboxylase	99.55
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.52
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.51
PLN02996	491	fatty acyl-CoA reductase	99.5
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.49
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.49
CHL00194	317	ycf39 Ycf39; Provisional	99.48
PRK07201	657	short chain dehydrogenase; Provisional	99.44
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.43
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.41
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.39
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.39
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.38
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.38
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.37
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.36
PLN02778	298	3,5-epimerase/4-reductase	99.31
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.29
PRK05865	854	hypothetical protein; Provisional	99.26
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.24
PLN02503	605	fatty acyl-CoA reductase 2	99.23
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.22
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.21
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.2
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.18
PLN02260	668	probable rhamnose biosynthetic enzyme	99.11
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.1
PLN00016	378	RNA-binding protein; Provisional	99.08
PRK08309	177	short chain dehydrogenase; Provisional	98.99
PRK12320	699	hypothetical protein; Provisional	98.97
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.97
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.81
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.79
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.77
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.75
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.65
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.64
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.55
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.55
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.53
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.47
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.4
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.33
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.32
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.3
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.24
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.14
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.11
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.08
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.06
PLN00106	323	malate dehydrogenase	97.96
COG2910	211	Putative NADH-flavin reductase [General function p	97.92
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.91
PRK09620	229	hypothetical protein; Provisional	97.87
PTZ00325	321	malate dehydrogenase; Provisional	97.87
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.84
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.81
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.77
PRK14982	340	acyl-ACP reductase; Provisional	97.75
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.61
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.6
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.57
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.52
KOG2774	366	consensus NAD dependent epimerase [General functio	97.48
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.43
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.41
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.41
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.37
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.36
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.33
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.32
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.24
PRK05086	312	malate dehydrogenase; Provisional	97.24
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.24
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.22
COG3268	382	Uncharacterized conserved protein [Function unknow	97.2
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.17
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.13
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.13
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.11
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.11
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.1
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.09
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.08
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.08
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.05
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.03
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.02
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.02
PRK14968	188	putative methyltransferase; Provisional	97.02
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.97
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.96
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.95
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.94
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.92
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.88
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.88
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.87
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.87
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.86
PRK06849	389	hypothetical protein; Provisional	96.85
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.82
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.8
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.77
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.76
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.74
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.73
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.71
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.65
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.63
PRK08328	231	hypothetical protein; Provisional	96.62
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.62
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.62
PRK08223	287	hypothetical protein; Validated	96.59
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.57
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.56
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.55
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.53
PTZ00117	319	malate dehydrogenase; Provisional	96.51
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.51
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.5
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.49
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.47
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.44
PLN02602	350	lactate dehydrogenase	96.41
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.39
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.38
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.36
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.34
PRK04148	134	hypothetical protein; Provisional	96.25
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.23
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.22
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.22
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.22
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.22
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.19
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.19
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.18
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.15
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.14
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.11
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.11
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.01
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.99
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.96
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.95
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.94
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.93
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.89
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.89
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.88
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.84
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.83
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.8
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.78
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.74
PRK07411	390	hypothetical protein; Validated	95.73
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.72
PRK14851	679	hypothetical protein; Provisional	95.71
PRK06223	307	malate dehydrogenase; Reviewed	95.67
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.67
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.67
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.66
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.65
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.62
PRK09496	453	trkA potassium transporter peripheral membrane com	95.61
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.58
PRK07877	722	hypothetical protein; Provisional	95.56
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.52
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.51
PLN00203	519	glutamyl-tRNA reductase	95.5
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.44
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	95.44
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.42
PRK14967	223	putative methyltransferase; Provisional	95.42
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.41
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.4
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.4
PRK09496	453	trkA potassium transporter peripheral membrane com	95.4
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.39
PLN02740	381	Alcohol dehydrogenase-like	95.39
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.26
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.24
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.23
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.21
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.19
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.19
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.19
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.16
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.15
PRK14852	989	hypothetical protein; Provisional	95.09
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.06
KOG2336	422	consensus Molybdopterin biosynthesis-related prote	95.06
PRK05442	326	malate dehydrogenase; Provisional	95.04
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.03
PRK06487	317	glycerate dehydrogenase; Provisional	94.98
PTZ00354	334	alcohol dehydrogenase; Provisional	94.98
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.96
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	94.95
PRK12480	330	D-lactate dehydrogenase; Provisional	94.95
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.94
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.93
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.91
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.89
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.88
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	94.88
COG4123	248	Predicted O-methyltransferase [General function pr	94.88
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.87
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.83
PRK15128	396	23S rRNA m(5)C1962 methyltransferase; Provisional	94.82
PRK13243	333	glyoxylate reductase; Reviewed	94.81
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.73
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.71
PRK10669	558	putative cation:proton antiport protein; Provision	94.68
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.67
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.66
PLN02827	378	Alcohol dehydrogenase-like	94.66
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.59
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	94.59
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.53
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	94.51
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.46
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.45
PRK06932	314	glycerate dehydrogenase; Provisional	94.42
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.41
PLN02928	347	oxidoreductase family protein	94.38
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	94.37
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	94.36
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.34
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.32
PRK08655	437	prephenate dehydrogenase; Provisional	94.31
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.3
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	94.25
KOG3191	209	consensus Predicted N6-DNA-methyltransferase [Tran	94.23
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	94.2
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	94.2
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.17
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	94.17
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	94.17
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	94.16
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.15

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.2e-45  Score=334.30  Aligned_cols=280  Identities=37%  Similarity=0.549  Sum_probs=234.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..+++|++++||||++|||+++|++||.+|++|++++||.++.++++++++...++.++.+++||++|.++|++++++++
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999987778899999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                      +      ..+++|++|||||++.+....+.|++|.+|.||++|+|++++.++|.|+.+. ++|||+|||..+    ....
T Consensus       110 ~------~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~----~~~~  178 (314)
T KOG1208|consen  110 K------KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG----GGKI  178 (314)
T ss_pred             h------cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc----cCcc
Confidence            8      7899999999999998888889999999999999999999999999999887 599999999987    2222


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccchhHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~  296 (369)
                      +.+++.+...   ..+....+|+.||.++..+++.|++++.   . ||.+++++||.|+|+ +.+ ..............
T Consensus       179 ~~~~l~~~~~---~~~~~~~~Y~~SKla~~l~~~eL~k~l~---~-~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~  250 (314)
T KOG1208|consen  179 DLKDLSGEKA---KLYSSDAAYALSKLANVLLANELAKRLK---K-GVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSW  250 (314)
T ss_pred             chhhccchhc---cCccchhHHHHhHHHHHHHHHHHHHHhh---c-CceEEEECCCcccccceec-chHHHHHHHHHHHH
Confidence            3333333211   1155556899999999999999999995   4 999999999999999 666 33333322222222


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~--~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      +  .+++++++|++.+++++.++  ..+|.|+.+  +....++....|++.++++|+.++++++..
T Consensus       251 ~--~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d--~~~~~~~~~a~d~~~~~~lw~~s~~l~~~~  312 (314)
T KOG1208|consen  251 P--LTKSPEQGAATTCYAALSPELEGVSGKYFED--CAIAEPSEEALDEELAEKLWKFSEELIDEQ  312 (314)
T ss_pred             H--hccCHHHHhhheehhccCccccCcccccccc--ccccccccccCCHHHHHHHHHHHHHHhhhc
Confidence            2  34799999999999999995  678999653  344455778899999999999999998764

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=5.9e-45  Score=313.55  Aligned_cols=228  Identities=28%  Similarity=0.362  Sum_probs=201.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++|||||||||.++|++|++.|++|++++|+.++++++++++.+    ..+.++.+|++|.+++.++++.+.+ 
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~-   77 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPE-   77 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHH-
Confidence            45689999999999999999999999999999999999999999999843    5789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           +++++|+||||||++  .+..+.+.++|+.++++|+.|.++.+++++|.|.+++ .|.|||+||++|.       
T Consensus        78 -----~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~-------  144 (246)
T COG4221          78 -----EFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGR-------  144 (246)
T ss_pred             -----hhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEecccccc-------
Confidence                 789999999999987  4556789999999999999999999999999999998 7899999999999       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .++|+.+.|++||+++..|++.|++|+.   .++|||..|+||.|.|..+...+.............
T Consensus       145 -------------~~y~~~~vY~ATK~aV~~fs~~LR~e~~---g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~  208 (246)
T COG4221         145 -------------YPYPGGAVYGATKAAVRAFSLGLRQELA---GTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK  208 (246)
T ss_pred             -------------ccCCCCccchhhHHHHHHHHHHHHHHhc---CCCeeEEEecCceecceecccccCCchhhhHHHHhc
Confidence                         9999999999999999999999999998   899999999999998877666554322222222222


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCCCC
Q 017580          298 LGLLQSPEKGINSVLDAALAPPET  321 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~~~  321 (369)
                      -....+|+|+|++|+|++..+...
T Consensus       209 ~~~~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         209 GGTALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             cCCCCCHHHHHHHHHHHHhCCCcc
Confidence            334679999999999998888754

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.6e-43  Score=311.26  Aligned_cols=224  Identities=22%  Similarity=0.318  Sum_probs=202.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.++++|++||||||++|||+++|.+||++|+++++++.|.+..++..+++++.   ++++.+.||+++.+++.+.++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHHHH
Confidence            446789999999999999999999999999999999999999999999999776   28999999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      ++      +.|++|+||||||++  .+..+.+.++++++++||+.|+++.+++|+|.|.+.+ .|+||+|+|.+|.    
T Consensus       109 k~------e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~----  177 (300)
T KOG1201|consen  109 KK------EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGL----  177 (300)
T ss_pred             HH------hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcc----
Confidence            99      779999999999998  4556889999999999999999999999999999987 8999999999999    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.++...|++||+|+.+|+++|..|+......||+.+.|+|++++|+|.+.-.+.        
T Consensus       178 ----------------~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~--------  233 (300)
T KOG1201|consen  178 ----------------FGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPF--------  233 (300)
T ss_pred             ----------------cCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCC--------
Confidence                            88899999999999999999999999987777889999999999999998862111        


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCCC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                       ..+....+|+++|+.++++.+...
T Consensus       234 -~~l~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  234 -PTLAPLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             -ccccCCCCHHHHHHHHHHHHHcCC
Confidence             112245799999999999887765

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=5.6e-43  Score=310.22  Aligned_cols=223  Identities=27%  Similarity=0.379  Sum_probs=199.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++++|||||+|||.++|++||++|++|++++|++++++++.++++..+ +..+.++++|+++++++.++.+++++  
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~--   80 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKE--   80 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHh--
Confidence            568999999999999999999999999999999999999999999999887 77899999999999999999999988  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          ..+.||+||||||..  +++.+.+.++.++++++|+.+...++++++|.|.+++ .|+||||+|.+|.        
T Consensus        81 ----~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~--------  147 (265)
T COG0300          81 ----RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGL--------  147 (265)
T ss_pred             ----cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhc--------
Confidence                668999999999986  5667899999999999999999999999999999987 7999999999999        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.|.++.|++||+++.+|+++|+.|++   +.||+|.+|+||++.|++....+...     ....+.
T Consensus       148 ------------~p~p~~avY~ATKa~v~~fSeaL~~EL~---~~gV~V~~v~PG~~~T~f~~~~~~~~-----~~~~~~  207 (265)
T COG0300         148 ------------IPTPYMAVYSATKAFVLSFSEALREELK---GTGVKVTAVCPGPTRTEFFDAKGSDV-----YLLSPG  207 (265)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEEecCcccccccccccccc-----ccccch
Confidence                        8889999999999999999999999998   89999999999999999986211110     111123


Q ss_pred             hCCCCHHHHHHHHHHHhcCCC
Q 017580          299 GLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      ..+.+|+++|+..++.+...+
T Consensus       208 ~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         208 ELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             hhccCHHHHHHHHHHHHhcCC
Confidence            356799999999998775543

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-42  Score=319.55  Aligned_cols=285  Identities=29%  Similarity=0.408  Sum_probs=224.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.++.+++.+++.+..++.++.++++|++|.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999999988776666789999999999999999999998


Q ss_pred             HHHhccCCCCCccEEEeccccccC-CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                      +      .++++|+||||||+..+ ..+.+.++++.+|++|++|++++++.++|.|++.  .+|||++||.++....   
T Consensus        89 ~------~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~---  157 (313)
T PRK05854         89 A------EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGA---  157 (313)
T ss_pred             H------hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCC---
Confidence            8      67899999999998754 3357889999999999999999999999999865  4899999998876321   


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----LSLMAF  292 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~----~~~~~~  292 (369)
                      ...++..     ...++++...|+.||+|+.+|++.|++++.. .+.+|+||+++||+|+|++.+..+..    ......
T Consensus       158 ~~~~~~~-----~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~-~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  231 (313)
T PRK05854        158 INWDDLN-----WERSYAGMRAYSQSKIAVGLFALELDRRSRA-AGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVR  231 (313)
T ss_pred             cCccccc-----ccccCcchhhhHHHHHHHHHHHHHHHHHhhc-CCCCeEEEEEecceeccCccccccccccchhHHHHH
Confidence            1111111     1134567789999999999999999987532 15789999999999999987543210    000100


Q ss_pred             HH--HHHhh-CCCCHHHHHHHHHHHhcCCCCCcccEEeCCC-----Cc--cccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          293 TV--LKLLG-LLQSPEKGINSVLDAALAPPETSGVYFFGGK-----GR--TVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       293 ~~--~~~~~-~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~-----g~--~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      ..  ....+ .+.+++++|.+.+++++.++..+|.||..++     +.  ....+....|++.+++||+.|+++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~~  308 (313)
T PRK05854        232 LIRSLSARGFLVGTVESAILPALYAATSPDAEGGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTGV  308 (313)
T ss_pred             HHHHHhhcccccCCHHHHHHHhhheeeCCCCCCCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHCC
Confidence            10  01111 3579999999999988887766799986542     11  122334457999999999999999973

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.5e-43  Score=310.95  Aligned_cols=194  Identities=29%  Similarity=0.414  Sum_probs=177.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +..+.||+|+|||||+|||+++|++|+++|++++++.|...+++.+.+++++..+..++++++||++|+++++++++++.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            44678999999999999999999999999999999999999999999999988765579999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      +++++|+||||||+..  ...+.+.+++...|++|++|+++++++++|+|++++ .|+||+|||++|+     
T Consensus        87 ~------~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~-----  154 (282)
T KOG1205|consen   87 R------HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGK-----  154 (282)
T ss_pred             H------hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccc-----
Confidence            8      7899999999999874  334567889999999999999999999999999987 8999999999999     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCC--eEEEEecCCcccCCcccc
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH--VSVIAADPGVVKTNIMRE  282 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~--i~v~~v~PG~v~T~~~~~  282 (369)
                                     .+.|..+.|++||+|+.+|+++|+.|+.   +.+  |++ +|+||+|+|++...
T Consensus       155 ---------------~~~P~~~~Y~ASK~Al~~f~etLR~El~---~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  155 ---------------MPLPFRSIYSASKHALEGFFETLRQELI---PLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             ---------------cCCCcccccchHHHHHHHHHHHHHHHhh---ccCceEEE-EEecCceeecccch
Confidence                           8888888999999999999999999998   544  666 99999999997654

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-42  Score=318.85  Aligned_cols=275  Identities=19%  Similarity=0.237  Sum_probs=218.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc----------chHHHHHHHHHhhcCCCcEEEEEecCCChH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS----------HLLSETMADITSRNKDARLEAFQVDLSSFQ  127 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~----------~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~  127 (369)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+.          ++++++.+++...  +.++.++++|+++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence            3457899999999999999999999999999999999984          4556666666443  456788999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCccEEEecc-ccc------cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCe
Q 017580          128 SVLKFKDSLQQWLLDSDMHSSIQLLINNA-GIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR  200 (369)
Q Consensus       128 ~i~~~~~~i~~~~~~~~~~~~id~lv~nA-G~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~  200 (369)
                      +++++++++.+      .++++|++|||| |+.      .+..+.+.+.+++.+++|+.+++.++++++|.|.+++ .|+
T Consensus        81 ~v~~~~~~~~~------~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~  153 (305)
T PRK08303         81 QVRALVERIDR------EQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGL  153 (305)
T ss_pred             HHHHHHHHHHH------HcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcE
Confidence            99999999988      678999999999 852      3344677899999999999999999999999998765 589


Q ss_pred             EEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017580          201 IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  280 (369)
Q Consensus       201 IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~  280 (369)
                      ||++||..+...                 ..+.+....|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.
T Consensus       154 IV~isS~~~~~~-----------------~~~~~~~~~Y~asKaal~~lt~~La~el~---~~gIrVn~v~PG~v~T~~~  213 (305)
T PRK08303        154 VVEITDGTAEYN-----------------ATHYRLSVFYDLAKTSVNRLAFSLAHELA---PHGATAVALTPGWLRSEMM  213 (305)
T ss_pred             EEEECCcccccc-----------------CcCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEecCCccccHHH
Confidence            999999765310                 01234466899999999999999999998   7899999999999999985


Q ss_pred             ccch--hHHHHHHHHHHHH-hhCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHH
Q 017580          281 REVP--SFLSLMAFTVLKL-LGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCN  355 (369)
Q Consensus       281 ~~~~--~~~~~~~~~~~~~-~~~~~~~~e~A~~v~~~~l~~~--~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~  355 (369)
                      ....  ............| .++..+|+|+|+.+++++....  ..+|+++.  ++....+..+.++++.++.||+++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (305)
T PRK08303        214 LDAFGVTEENWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS--SGQLARVYGFTDLDGSRPDAWRYLVE  291 (305)
T ss_pred             HHhhccCccchhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE--hHHHHHhcCccCCCCCCCcchhhhhh
Confidence            4311  0000111111234 3567799999999997665432  46899987  55677788888899999999999999


Q ss_pred             hhhccCCc
Q 017580          356 LFINSQLA  363 (369)
Q Consensus       356 ~~~~~~~~  363 (369)
                      .-..-.|+
T Consensus       292 ~~~~~~~~  299 (305)
T PRK08303        292 VQDAGKPA  299 (305)
T ss_pred             ccccCCCC
Confidence            87655553

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-41  Score=311.41  Aligned_cols=285  Identities=38%  Similarity=0.467  Sum_probs=226.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++.+++.+++....++.++.++.+|++|.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998888888887765555678999999999999999999998


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                      +      .++++|++|||||+..+....+.++++..+++|+.|++.+++.++|.|++.+ .++||++||.++........
T Consensus        91 ~------~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~  163 (306)
T PRK06197         91 A------AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHF  163 (306)
T ss_pred             h------hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCc
Confidence            8      6789999999999876655677889999999999999999999999998765 58999999987653111111


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE--ecCCcccCCccccchhHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA--ADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~--v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                      ++.  .     ...++++...|++||+++++++++++++++   +.+++|++  ++||+|+|++.++.+........ ..
T Consensus       164 ~~~--~-----~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~---~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~-~~  232 (306)
T PRK06197        164 DDL--Q-----WERRYNRVAAYGQSKLANLLFTYELQRRLA---AAGATTIAVAAHPGVSNTELARNLPRALRPVAT-VL  232 (306)
T ss_pred             ccc--C-----cccCCCcHHHHHHHHHHHHHHHHHHHHHhh---cCCCCeEEEEeCCCcccCcccccCcHHHHHHHH-HH
Confidence            111  0     013456678999999999999999999997   56665554  57999999998876543222111 11


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc-------cccCCcccCCHHHHHHHHHHHHHhhhccC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR-------TVNSSALSFNSKLAGELWTTSCNLFINSQ  361 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~-------~~~~~~~~~d~~~~~~lw~~~~~~~~~~~  361 (369)
                      .+. ...++++++..++++...++..+|.||..+++.       ...++....|++.+++||+.|+++++..-
T Consensus       233 ~~~-~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~  304 (306)
T PRK06197        233 APL-LAQSPEMGALPTLRAATDPAVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTGVSF  304 (306)
T ss_pred             Hhh-hcCCHHHHHHHHHHHhcCCCcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHCCCC
Confidence            121 246899999999988887766789888755432       22556678899999999999999998543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.1e-41  Score=279.81  Aligned_cols=236  Identities=24%  Similarity=0.308  Sum_probs=201.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++.|+++||||++|||++++..|+++|++|++.+++...++++...+...   .....+.||+++.++++..+++..+  
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k--   86 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEK--   86 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHH--
Confidence            45689999999999999999999999999999999998888877776332   4668899999999999999999988  


Q ss_pred             hccCCCCCccEEEeccccccCC--CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCcccccccccC
Q 017580          141 LDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~--~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~~~~~~~~~~  217 (369)
                          ..+++++||||||+..+.  -.+..++|++.+.+|+.|.|+++|++.+.|...+ .+++||||||+.|.       
T Consensus        87 ----~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk-------  155 (256)
T KOG1200|consen   87 ----SLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK-------  155 (256)
T ss_pred             ----hcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc-------
Confidence                668999999999998443  3678999999999999999999999999844332 25699999999998       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.-+.+.|++||+++.+|+++.++|++   .++||||+|+||++.|||+...|+... .......|
T Consensus       156 -------------iGN~GQtnYAAsK~GvIgftktaArEla---~knIrvN~VlPGFI~tpMT~~mp~~v~-~ki~~~iP  218 (256)
T KOG1200|consen  156 -------------IGNFGQTNYAASKGGVIGFTKTAARELA---RKNIRVNVVLPGFIATPMTEAMPPKVL-DKILGMIP  218 (256)
T ss_pred             -------------cccccchhhhhhcCceeeeeHHHHHHHh---hcCceEeEeccccccChhhhhcCHHHH-HHHHccCC
Confidence                         6677888999999999999999999999   899999999999999999998876432 23445678


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCCC---CcccEEeCCCC
Q 017580          298 LGLLQSPEKGINSVLDAALAPPE---TSGVYFFGGKG  331 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~~---~sG~~~~~~~g  331 (369)
                      ++|+.++||+|+.++  |+.++.   .+|.-+.+.+|
T Consensus       219 mgr~G~~EevA~~V~--fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  219 MGRLGEAEEVANLVL--FLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             ccccCCHHHHHHHHH--HHhccccccccceeEEEecc
Confidence            999999999999999  555663   45666655554

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-40  Score=303.65  Aligned_cols=243  Identities=19%  Similarity=0.255  Sum_probs=204.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++.+|++|+++++++++++.+ 
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~-   82 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKN-   82 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHh-
Confidence            4679999999999999999999999999999999999988888888776543 45788999999999999999998853 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                            ++++|++|||||...  +..+.+.++|++++++|+.++++++++++|.|++++ .|+||++||.++.       
T Consensus        83 ------~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~-------  148 (263)
T PRK08339         83 ------IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIK-------  148 (263)
T ss_pred             ------hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCcccc-------
Confidence                  588999999999753  345788999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FL  287 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~~  287 (369)
                                   .+.+....|++||+|+.+|++++++|++   +.||+||+|+||+|+|++......          ..
T Consensus       149 -------------~~~~~~~~y~asKaal~~l~~~la~el~---~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  212 (263)
T PRK08339        149 -------------EPIPNIALSNVVRISMAGLVRTLAKELG---PKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEE  212 (263)
T ss_pred             -------------CCCCcchhhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHH
Confidence                         6677788999999999999999999998   889999999999999998654211          11


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .........|++++.+|+|+|+++++++... ...+|+.+..++|...
T Consensus       213 ~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~  260 (263)
T PRK08339        213 ALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLN  260 (263)
T ss_pred             HHHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCccc
Confidence            1111222346788999999999999655332 2568999988887654

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-39  Score=304.04  Aligned_cols=276  Identities=26%  Similarity=0.390  Sum_probs=215.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.+++.+++.      .+.++++|++|.++++++++++.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHh
Confidence            35689999999999999999999999999999999999888777766652      377899999999999999999987


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                            .++++|+||||||+..+..+.+.++++..+++|+.|++.+++.++|.|++++ .++||++||..+.... ....
T Consensus        96 ------~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~-~~~~  167 (315)
T PRK06196         96 ------SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSP-IRWD  167 (315)
T ss_pred             ------cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCC-CCcc
Confidence                  6789999999999875555667889999999999999999999999998775 5899999997654221 1111


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-HH--HHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-AF--TVL  295 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~~--~~~  295 (369)
                      +.  .   +  ..++++...|+.||++++.+++.+++++.   +.||+|++|+||++.|++.+..+...... ..  ...
T Consensus       168 ~~--~---~--~~~~~~~~~Y~~SK~a~~~~~~~la~~~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  237 (315)
T PRK06196        168 DP--H---F--TRGYDKWLAYGQSKTANALFAVHLDKLGK---DQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG  237 (315)
T ss_pred             cc--C---c--cCCCChHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh
Confidence            10  0   0  14456678999999999999999999997   78999999999999999976654321110 00  011


Q ss_pred             HHhh-CCCCHHHHHHHHHHHhcCCCC--CcccEEeCCCCccc---------cCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          296 KLLG-LLQSPEKGINSVLDAALAPPE--TSGVYFFGGKGRTV---------NSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       296 ~~~~-~~~~~~e~A~~v~~~~l~~~~--~sG~~~~~~~g~~~---------~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      .++. ++.+|+++|.++++++..++.  .+|.|+. +.....         ..+..+.|++++++||+.|+++++.
T Consensus       238 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~~  312 (315)
T PRK06196        238 NPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCE-DCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTGV  312 (315)
T ss_pred             hhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeC-CCcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHCC
Confidence            2222 467999999999998876652  3455554 322111         2345578999999999999999863

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5e-40  Score=300.95  Aligned_cols=239  Identities=17%  Similarity=0.202  Sum_probs=194.7

Q ss_pred             CCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+ .. .++++|++|.++++++++++.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence            578999999997  89999999999999999999999853 2333344433322 23 6789999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                            .++++|+||||||+..      +..+.+.++|++++++|+.+++++++.++|.|++   .|+||++||.++.  
T Consensus        80 ------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~--  148 (274)
T PRK08415         80 ------DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGV--  148 (274)
T ss_pred             ------HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCc--
Confidence                  6789999999999752      3457789999999999999999999999999965   3799999998877  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH-
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-  291 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~-  291 (369)
                                        .+.+.+..|++||+|+.+|+++|+.|++   ++||+||+|+||+|+|++............ 
T Consensus       149 ------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~  207 (274)
T PRK08415        149 ------------------KYVPHYNVMGVAKAALESSVRYLAVDLG---KKGIRVNAISAGPIKTLAASGIGDFRMILKW  207 (274)
T ss_pred             ------------------cCCCcchhhhhHHHHHHHHHHHHHHHhh---hcCeEEEEEecCccccHHHhccchhhHHhhh
Confidence                              6667788999999999999999999998   889999999999999998654322111111 


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .....|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       208 ~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        208 NEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             hhhhCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcccc
Confidence            112347788999999999999655432 3678999999988764

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.6e-39  Score=302.85  Aligned_cols=282  Identities=26%  Similarity=0.367  Sum_probs=216.7

Q ss_pred             EEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           67 IVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        67 lITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      +||||++|||+++|++|+++| ++|++++|+.++++++.+++...  +.++.++++|++|.++++++++++.+      .
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~------~   72 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRR------S   72 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHh------c
Confidence            699999999999999999999 99999999988888777776432  45788899999999999999999987      6


Q ss_pred             CCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC-CCeEEEEcCCccccccc-----cc
Q 017580          146 HSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTSFTHRNVFN-----AQ  216 (369)
Q Consensus       146 ~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-~g~IV~vsS~~~~~~~~-----~~  216 (369)
                      ++++|+||||||+..   +..+.+.++++++|++|+.|++.+++.++|.|++++. .|+||+|||.++.....     ..
T Consensus        73 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  152 (308)
T PLN00015         73 GRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPK  152 (308)
T ss_pred             CCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCc
Confidence            689999999999863   3356789999999999999999999999999987631 48999999988753211     00


Q ss_pred             CCCcccc----------cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchh
Q 017580          217 VNNETIT----------GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPS  285 (369)
Q Consensus       217 ~~~~~~~----------~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v-~T~~~~~~~~  285 (369)
                      .......          ...+....++++..+|++||+|+..+++.+++++..  ..||+|++|+||+| .|+|.+....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~--~~gi~v~~v~PG~v~~t~~~~~~~~  230 (308)
T PLN00015        153 ANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHE--ETGITFASLYPGCIATTGLFREHIP  230 (308)
T ss_pred             cchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcc--cCCeEEEEecCCcccCccccccccH
Confidence            0000000          000111134567789999999999999999999961  36899999999999 7999765432


Q ss_pred             HHHHH-HHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC---ccccCCcccCCHHHHHHHHHHHHHhhh
Q 017580          286 FLSLM-AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG---RTVNSSALSFNSKLAGELWTTSCNLFI  358 (369)
Q Consensus       286 ~~~~~-~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g---~~~~~~~~~~d~~~~~~lw~~~~~~~~  358 (369)
                      ..... ......+.+++.+|+++|+.+++++.... ..+|.|+..+++   .+.+++..+.|++.+++||+.|+++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~~  308 (308)
T PLN00015        231 LFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLVG  308 (308)
T ss_pred             HHHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhcC
Confidence            21111 11123345567899999999998766544 578999865543   335778889999999999999999874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-39  Score=296.61  Aligned_cols=243  Identities=15%  Similarity=0.177  Sum_probs=197.8

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++||+++||||++  |||+++|++|+++|++|++++|+. ..++..+++.+.. +. ..++++|++|+++++++++++.+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g~-~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-GC-NFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-CC-ceEEEccCCCHHHHHHHHHHHHH
Confidence            6789999999997  999999999999999999999884 4444555554432 22 24678999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                            .++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|++   .|+||++||.++.  
T Consensus        83 ------~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~--  151 (260)
T PRK06603         83 ------KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAE--  151 (260)
T ss_pred             ------HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccc--
Confidence                  6789999999999753      3457789999999999999999999999999964   4899999998876  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMA  291 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-~~~~  291 (369)
                                        .+.+....|++||+|+.+|+++|+.|++   ++||+||+|+||+++|++.+...... ....
T Consensus       152 ------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~  210 (260)
T PRK06603        152 ------------------KVIPNYNVMGVAKAALEASVKYLANDMG---ENNIRVNAISAGPIKTLASSAIGDFSTMLKS  210 (260)
T ss_pred             ------------------cCCCcccchhhHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcCcchhhhcCCCcHHHHHH
Confidence                              6667788999999999999999999998   88999999999999999865332111 1111


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccCCc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSA  338 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~~~~  338 (369)
                      .....|++|+.+|+|+|+.+++++.. +...+|+.+..++|..+..++
T Consensus       211 ~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~~  258 (260)
T PRK06603        211 HAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIMGSN  258 (260)
T ss_pred             HHhcCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCcccccCcC
Confidence            22234778889999999999976543 235689999999887765543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-39  Score=297.95  Aligned_cols=240  Identities=13%  Similarity=0.122  Sum_probs=194.0

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++||++|||||++  |||+++|++|+++|++|++++|+....+. .+++.+.. + ....+++|++|+++++++++++.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-G-SDFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-C-CceEEeCCCCCHHHHHHHHHHHHH
Confidence            6789999999996  99999999999999999999998644333 33333322 2 235789999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                            .++++|+||||||+..      +..+.+.++|++++++|+.++++++++++|+|++   .|+||++||.++.  
T Consensus        82 ------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~--  150 (271)
T PRK06505         82 ------KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGST--  150 (271)
T ss_pred             ------HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCcc--
Confidence                  6689999999999863      3447789999999999999999999999999973   4899999999877  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-H
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-A  291 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~  291 (369)
                                        .+.+.+..|++||+|+.+|+++|+.|++   +.||+||+|+||+++|++........... .
T Consensus       151 ------------------~~~~~~~~Y~asKaAl~~l~r~la~el~---~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~  209 (271)
T PRK06505        151 ------------------RVMPNYNVMGVAKAALEASVRYLAADYG---PQGIRVNAISAGPVRTLAGAGIGDARAIFSY  209 (271)
T ss_pred             ------------------ccCCccchhhhhHHHHHHHHHHHHHHHh---hcCeEEEEEecCCccccccccCcchHHHHHH
Confidence                              5667788999999999999999999998   88999999999999999865432211111 1


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      .....|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       210 ~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        210 QQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             HhhcCCccccCCHHHHHHHHHHHhCccccccCceEEeecCCcccC
Confidence            112346778899999999999654322 25689999988886543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=5.9e-39  Score=299.66  Aligned_cols=288  Identities=26%  Similarity=0.386  Sum_probs=218.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++++++.+++...  +.++.++.+|+++.++++++++++.+  
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~--   77 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRE--   77 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            36899999999999999999999999 99999999998888887776432  45788899999999999999999987  


Q ss_pred             hccCCCCCccEEEeccccccC---CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccccccc-c
Q 017580          141 LDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFN-A  215 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~~~~~~~-~  215 (369)
                          .++++|++|||||+..+   ..+.+.+++++++++|+.|++++++.++|.|++++ ..|+||++||.++..... .
T Consensus        78 ----~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~  153 (314)
T TIGR01289        78 ----SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAG  153 (314)
T ss_pred             ----hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCC
Confidence                56889999999998643   23568899999999999999999999999998763 248999999998764210 0


Q ss_pred             ----cCCCccccc--------ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCcccc
Q 017580          216 ----QVNNETITG--------KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMRE  282 (369)
Q Consensus       216 ----~~~~~~~~~--------~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v-~T~~~~~  282 (369)
                          +.+..++..        ..+....++.+..+|++||+|+..+++.|++++..  +.+|+|++|+||+| +|++.++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~--~~gi~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       154 NVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHD--ETGITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             cCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhcc--CCCeEEEEecCCcccCCccccc
Confidence                111111110        00111234567789999999999999999999841  46899999999999 6999865


Q ss_pred             chhHHHHH-HHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc---ccCCcccCCHHHHHHHHHHHHHhh
Q 017580          283 VPSFLSLM-AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT---VNSSALSFNSKLAGELWTTSCNLF  357 (369)
Q Consensus       283 ~~~~~~~~-~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~---~~~~~~~~d~~~~~~lw~~~~~~~  357 (369)
                      ........ ..........+.+|+++|+.+++++...+ ..+|.||..++...   .+++..+.|++.+++||+.|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~  311 (314)
T TIGR01289       232 HVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLV  311 (314)
T ss_pred             ccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHh
Confidence            33221111 11111112346799999999998777654 45788875433211   366777899999999999999998


Q ss_pred             hc
Q 017580          358 IN  359 (369)
Q Consensus       358 ~~  359 (369)
                      +.
T Consensus       312 ~~  313 (314)
T TIGR01289       312 GL  313 (314)
T ss_pred             cc
Confidence            63

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.2e-40  Score=296.01  Aligned_cols=235  Identities=17%  Similarity=0.194  Sum_probs=194.3

Q ss_pred             CCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.    ..++.++++|++|+++++++++++.+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            679999999999  7999999999999999999999983 4444333332    23678999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                            .++++|+||||||+..      +..+.+.++|++.+++|+.+++++++.++|+|.+   .|+||++||.++.  
T Consensus        80 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~--  148 (252)
T PRK06079         80 ------RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSE--  148 (252)
T ss_pred             ------HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCcc--
Confidence                  5689999999999753      4457789999999999999999999999999964   4899999998877  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMA  291 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~~~  291 (369)
                                        .+.+.+..|++||+|+.+|+++|+.|++   ++||+||+|+||+|+|++.+..... .....
T Consensus       149 ------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~  207 (252)
T PRK06079        149 ------------------RAIPNYNVMGIAKAALESSVRYLARDLG---KKGIRVNAISAGAVKTLAVTGIKGHKDLLKE  207 (252)
T ss_pred             ------------------ccCCcchhhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccccccccCCChHHHHHH
Confidence                              6667788999999999999999999998   8899999999999999986543211 11111


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .....|++++.+|+|+|+++++++... ...+|+.+..++|.
T Consensus       208 ~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        208 SDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             HHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeCCce
Confidence            223346788999999999999665432 36689998888774

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-39  Score=297.35  Aligned_cols=257  Identities=25%  Similarity=0.377  Sum_probs=211.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||++|||+++|++|+++|++|++++|+ +++++..+++.+.  +.++.++.+|+++++++.++++++.+ 
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   78 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKE-   78 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHH-
Confidence            4678999999999999999999999999999999999 7777777777553  45789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .++++|+||||||+..   +..+.+.+.+++++++|+.+++.+++.++|.|++++  |+||++||..+.      
T Consensus        79 -----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~------  145 (272)
T PRK08589         79 -----QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQ------  145 (272)
T ss_pred             -----HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhc------
Confidence                 6789999999999863   344678899999999999999999999999998764  899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-H--HH--
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-L--MA--  291 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~--~~--  291 (369)
                                    .+.+....|++||+|++.|++++++|+.   +.||+||+|+||+|+|++.+....... .  ..  
T Consensus       146 --------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  208 (272)
T PRK08589        146 --------------AADLYRSGYNAAKGAVINFTKSIAIEYG---RDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFR  208 (272)
T ss_pred             --------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcccCchhhhhcccchhhHHHHHh
Confidence                          5566778999999999999999999998   789999999999999998765322110 0  00  


Q ss_pred             --HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCCHHHHHHHHHHH
Q 017580          292 --FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTS  353 (369)
Q Consensus       292 --~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~  353 (369)
                        .....|++++.+|+|+|+.+++++... ...+|+.+..++|....   ...+...++..|+.+
T Consensus       209 ~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~~~~---~~~~~~~~~~~~~~~  270 (272)
T PRK08589        209 ENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAY---TWPGEMLSDDSWKRT  270 (272)
T ss_pred             hhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCcccC---CCCCcccccchhhhh
Confidence              111236678889999999999765432 36789999888886532   233666777778765

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-39  Score=295.24  Aligned_cols=245  Identities=26%  Similarity=0.294  Sum_probs=206.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+++++++..+++...+.+.++.++++|++++++++++++++.+ 
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-   82 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE-   82 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH-
Confidence            4678999999999999999999999999999999999999888888887644456789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+.       
T Consensus        83 -----~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  149 (260)
T PRK07063         83 -----AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAF-------  149 (260)
T ss_pred             -----HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhc-------
Confidence                 6689999999999752  344678899999999999999999999999998765 6899999999877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hHH-HHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SFL-SLMAF  292 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----~~~-~~~~~  292 (369)
                                   .+.++...|++||+|+.+++++++.|++   +.||+||+|+||+++|++.+...    ... .....
T Consensus       150 -------------~~~~~~~~Y~~sKaa~~~~~~~la~el~---~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  213 (260)
T PRK07063        150 -------------KIIPGCFPYPVAKHGLLGLTRALGIEYA---ARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAET  213 (260)
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHH
Confidence                         6667788999999999999999999998   78999999999999999865421    111 11112


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ....|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       214 ~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        214 LALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCeee
Confidence            23346788999999999999654432 2568999888887543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-39  Score=293.52  Aligned_cols=240  Identities=20%  Similarity=0.254  Sum_probs=197.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|+..  ++..++++..  +.++.++.+|++++++++++++++.+ 
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   79 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE-   79 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999998643  3344444333  45788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.++++|++++++|+.+++.++++++|.|++++..|+||++||.++.       
T Consensus        80 -----~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~-------  147 (251)
T PRK12481         80 -----VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSF-------  147 (251)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhc-------
Confidence                 5689999999999863  34577899999999999999999999999999776435899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~  296 (369)
                                   .+.+....|++||+|+++++++++.|++   +.||+||+|+||+++|++.+..... ..........
T Consensus       148 -------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  211 (251)
T PRK12481        148 -------------QGGIRVPSYTASKSAVMGLTRALATELS---QYNINVNAIAPGYMATDNTAALRADTARNEAILERI  211 (251)
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCCCccCchhhcccChHHHHHHHhcC
Confidence                         5556677999999999999999999998   8899999999999999987654221 1111122334


Q ss_pred             HhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017580          297 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  332 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~  332 (369)
                      |.+++.+|+|+|+++++++.. +...+|+.+..++|.
T Consensus       212 p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        212 PASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGGW  248 (251)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCcCCceEEECCCE
Confidence            677889999999999965543 235688888888774

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-39  Score=294.83  Aligned_cols=240  Identities=15%  Similarity=0.141  Sum_probs=195.2

Q ss_pred             CCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGa--s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++|+++||||  ++|||+++|++|+++|++|++++|+. +.++..+++....+  ....++||++|+++++++++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD--SELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC--CceEEECCCCCHHHHHHHHHHHHH
Confidence            67899999997  67999999999999999999998863 44444555544332  346789999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccccC-------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT-------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~-------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                            +++++|++|||||+..+       ..+.+.+.|++.+++|+.++++++++++|.|+++  .|+||++||.++. 
T Consensus        81 ------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~-  151 (261)
T PRK08690         81 ------HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAV-  151 (261)
T ss_pred             ------HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccc-
Confidence                  56899999999998642       1346788999999999999999999999999755  3899999999887 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~  290 (369)
                                         .+.+++..|++||+|+.+|+++++.|++   ++||+||+|+||+|+|++.+........ .
T Consensus       152 -------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~  209 (261)
T PRK08690        152 -------------------RAIPNYNVMGMAKASLEAGIRFTAACLG---KEGIRCNGISAGPIKTLAASGIADFGKLLG  209 (261)
T ss_pred             -------------------cCCCCcccchhHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcccchhhhcCCchHHHHH
Confidence                               6677888999999999999999999998   8899999999999999987654221111 1


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      ......|++|+.+|+|+|+.+++++.. +...+|+.+..++|...
T Consensus       210 ~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        210 HVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCccc
Confidence            122234778899999999999965543 23678999988888654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=3.1e-39  Score=293.55  Aligned_cols=240  Identities=15%  Similarity=0.135  Sum_probs=195.4

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcc--hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+..  .++.++++|++|++++++++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc--CcceEeecCcCCHHHHHHHHHH
Confidence            3678999999986  89999999999999999999887643  3455556665442  3467899999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      +.+      .++++|++|||||+..      +..+.+.++|++++++|+.+++++++.++|.|++   .|+||++||..+
T Consensus        81 ~~~------~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~  151 (258)
T PRK07370         81 IKQ------KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGG  151 (258)
T ss_pred             HHH------HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecccc
Confidence            988      6689999999999752      4557789999999999999999999999999974   389999999887


Q ss_pred             cccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHH
Q 017580          210 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLS  288 (369)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~  288 (369)
                      .                    .+.+....|++||+|+.+++++|+.|++   ++||+||+|+||+++|++.+.... ...
T Consensus       152 ~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI~Vn~i~PG~v~T~~~~~~~~~~~~  208 (258)
T PRK07370        152 V--------------------RAIPNYNVMGVAKAALEASVRYLAAELG---PKNIRVNAISAGPIRTLASSAVGGILDM  208 (258)
T ss_pred             c--------------------cCCcccchhhHHHHHHHHHHHHHHHHhC---cCCeEEEEEecCcccCchhhccccchhh
Confidence            7                    6677888999999999999999999998   899999999999999998654321 111


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ........|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       209 ~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~  254 (258)
T PRK07370        209 IHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYC  254 (258)
T ss_pred             hhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCccc
Confidence            111222346778899999999999654322 256888888877643

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=2.4e-38  Score=296.96  Aligned_cols=289  Identities=26%  Similarity=0.389  Sum_probs=219.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++...  +.++.++.+|+++.++++++++++.+ 
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~-   79 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRA-   79 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            456899999999999999999999999999999999998888888777432  45788999999999999999998876 


Q ss_pred             HhccCCCCCccEEEeccccccCC---CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC-CCeEEEEcCCccccccc-
Q 017580          140 LLDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTSFTHRNVFN-  214 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-~g~IV~vsS~~~~~~~~-  214 (369)
                           ..+++|+||||||+..+.   .+.+.++++.++++|+.|++++++.++|.|++++. .+|||++||..+..... 
T Consensus        80 -----~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~  154 (322)
T PRK07453         80 -----LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELG  154 (322)
T ss_pred             -----hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccC
Confidence                 567899999999986432   45688999999999999999999999999987752 26999999987653210 


Q ss_pred             c------cCCCccccc--------ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCc
Q 017580          215 A------QVNNETITG--------KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNI  279 (369)
Q Consensus       215 ~------~~~~~~~~~--------~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v-~T~~  279 (369)
                      .      ..+.++...        .......++.+..+|+.||+++..+++.+++++..  ..+|++++++||+| .|++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~--~~gi~v~~v~PG~v~~t~~  232 (322)
T PRK07453        155 GKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHE--STGITFSSLYPGCVADTPL  232 (322)
T ss_pred             CccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcc--cCCeEEEEecCCcccCCcc
Confidence            0      001110000        00001134556789999999999999999999851  46899999999999 5999


Q ss_pred             cccchhHHHHHH-HHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc-------cccCCcccCCHHHHHHHH
Q 017580          280 MREVPSFLSLMA-FTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR-------TVNSSALSFNSKLAGELW  350 (369)
Q Consensus       280 ~~~~~~~~~~~~-~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~-------~~~~~~~~~d~~~~~~lw  350 (369)
                      .++.+....... ...........++++.|+.+++++..+. ..+|.||..+...       ...++..+.|++.+++||
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw  312 (322)
T PRK07453        233 FRNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWSWGNRQKKDRKAFSQELSDRATDDDKARRLW  312 (322)
T ss_pred             cccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceeecCCCCCcCccccccccchhhcCHHHHHHHH
Confidence            876543222111 1111122235689999999998887765 4688888632211       135677889999999999


Q ss_pred             HHHHHhhh
Q 017580          351 TTSCNLFI  358 (369)
Q Consensus       351 ~~~~~~~~  358 (369)
                      ++|+++++
T Consensus       313 ~~s~~~~~  320 (322)
T PRK07453        313 DLSAKLVG  320 (322)
T ss_pred             HHHHHHhC
Confidence            99999986

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.6e-39  Score=291.41  Aligned_cols=240  Identities=14%  Similarity=0.122  Sum_probs=193.7

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        59 ~~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+..  ..+.+++||++|+++++++++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEEL--DAPIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhh--ccceEEecCcCCHHHHHHHHHHH
Confidence            35789999999998  59999999999999999999999864322 233333322  13568899999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                      .+      .++++|++|||||+..      +..+.+.++|++++++|+.+++++++.++|.|++   .|+||++||.++.
T Consensus        83 ~~------~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~  153 (258)
T PRK07533         83 AE------EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAE  153 (258)
T ss_pred             HH------HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccc
Confidence            88      6789999999999753      3346789999999999999999999999999963   4899999998876


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-H
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-L  289 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~  289 (369)
                                          .+.+.+..|++||+|+.+|+++|+.|++   ++||+||+|+||+++|++.+....... .
T Consensus       154 --------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~  210 (258)
T PRK07533        154 --------------------KVVENYNLMGPVKAALESSVRYLAAELG---PKGIRVHAISPGPLKTRAASGIDDFDALL  210 (258)
T ss_pred             --------------------cCCccchhhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCCcCChhhhccCCcHHHH
Confidence                                5667788999999999999999999998   789999999999999999765321111 1


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .......|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~~  255 (258)
T PRK07533        211 EDAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGYH  255 (258)
T ss_pred             HHHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCccc
Confidence            11223346778899999999999765432 357899988887753

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-39  Score=291.01  Aligned_cols=243  Identities=20%  Similarity=0.277  Sum_probs=201.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||++++++|+++|++|++++|+.++++++.++++..  +.++..+.+|++++++++++++++.+ 
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTA-   82 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999998888888887654  35688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.+.+.+++.+++|+.+++.++++++|.|.+++..|+||++||..+...     
T Consensus        83 -----~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----  152 (253)
T PRK05867         83 -----ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII-----  152 (253)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC-----
Confidence                 5688999999999863  4456788999999999999999999999999977653589999999876510     


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   ...+....|++||+|++++++++++|++   +.||+||+|+||+|+|++.+..+...  .......|
T Consensus       153 -------------~~~~~~~~Y~asKaal~~~~~~la~e~~---~~gI~vn~i~PG~v~t~~~~~~~~~~--~~~~~~~~  214 (253)
T PRK05867        153 -------------NVPQQVSHYCASKAAVIHLTKAMAVELA---PHKIRVNSVSPGYILTELVEPYTEYQ--PLWEPKIP  214 (253)
T ss_pred             -------------CCCCCccchHHHHHHHHHHHHHHHHHHh---HhCeEEEEeecCCCCCcccccchHHH--HHHHhcCC
Confidence                         1112356899999999999999999998   78999999999999999976543321  11223346


Q ss_pred             hhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      ++++.+|+|+|+++++++.. +...+|+.+..++|..
T Consensus       215 ~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        215 LGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCcc
Confidence            77899999999999965543 2356899988888754

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-39  Score=292.06  Aligned_cols=243  Identities=24%  Similarity=0.284  Sum_probs=205.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+++.++.++.+|++|+++++++++++.+ 
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA-   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH-
Confidence            5789999999999999999999999999999999999999988888887776666889999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+.  .+..+.+.+.|++.+++|+.+++.+++.++|.|++++ .|+||++||..+.       
T Consensus        84 -----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  150 (265)
T PRK07062         84 -----RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLAL-------  150 (265)
T ss_pred             -----hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEecccccc-------
Confidence                 678999999999985  3445778899999999999999999999999998775 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--------HHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--------FLSL  289 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--------~~~~  289 (369)
                                   .+.+....|++||+|+.+++++++.|+.   +.||+|++|+||+|+|++......        ....
T Consensus       151 -------------~~~~~~~~y~asKaal~~~~~~la~e~~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~  214 (265)
T PRK07062        151 -------------QPEPHMVATSAARAGLLNLVKSLATELA---PKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAW  214 (265)
T ss_pred             -------------CCCCCchHhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCccccchhhhHHHHhhccCCChHHH
Confidence                         5667788999999999999999999998   789999999999999998643111        0000


Q ss_pred             HH---HHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017580          290 MA---FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  332 (369)
Q Consensus       290 ~~---~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~  332 (369)
                      ..   .....|++++.+|+|+|+.+++++.. +...+|+.+..++|.
T Consensus       215 ~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        215 TAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             HHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            00   01123667889999999999975542 236789988888774

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6e-39  Score=291.41  Aligned_cols=238  Identities=13%  Similarity=0.104  Sum_probs=192.5

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCc---chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHH
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++    .+.++..+++|++|+++++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL----EGQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc----CCCceEEEecCCCCHHHHHHHHH
Confidence            4679999999997  8999999999999999999998764   2333333332    24578899999999999999999


Q ss_pred             HHHHHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                      ++.+      .++++|++|||||+..      +..+.+.++|++.+++|+.+++++++.++|.|.+   .|+||++||..
T Consensus        80 ~~~~------~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~  150 (257)
T PRK08594         80 TIKE------EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLG  150 (257)
T ss_pred             HHHH------hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccC
Confidence            9988      6789999999999753      3346788999999999999999999999999964   48999999998


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  288 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~  288 (369)
                      +.                    .+.+....|++||+|+.+|+++++.|++   +.||+||+|+||+++|++.+.......
T Consensus       151 ~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrvn~v~PG~v~T~~~~~~~~~~~  207 (257)
T PRK08594        151 GE--------------------RVVQNYNVMGVAKASLEASVKYLANDLG---KDGIRVNAISAGPIRTLSAKGVGGFNS  207 (257)
T ss_pred             Cc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCCEEeeeecCcccCHhHhhhccccH
Confidence            87                    6667778999999999999999999998   789999999999999997653321111


Q ss_pred             -HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          289 -LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       289 -~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                       ........|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       208 ~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~~  254 (257)
T PRK08594        208 ILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGYH  254 (257)
T ss_pred             HHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccceEEEECCchh
Confidence             111122336678899999999999655432 356899888877743

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.3e-39  Score=292.46  Aligned_cols=240  Identities=14%  Similarity=0.149  Sum_probs=193.7

Q ss_pred             CCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++|+++||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.+.. + ....+++|++|+++++++++++.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~-~-~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAEL-G-AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhc-C-CceEEecCCCCHHHHHHHHHHHHH
Confidence            568999999997  89999999999999999999988742 233333343332 1 256789999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                            .++++|++|||||+..      +..+.+.++|++.+++|+.+++++++.++|.|++   .|+||++||.++.  
T Consensus        85 ------~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~--  153 (272)
T PRK08159         85 ------KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAE--  153 (272)
T ss_pred             ------hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccc--
Confidence                  6789999999999863      3457789999999999999999999999999964   4899999998776  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                                        .+.+.+..|++||+|+.+|+++|+.|++   +.||+||+|+||+++|++....+........
T Consensus       154 ------------------~~~p~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~  212 (272)
T PRK08159        154 ------------------KVMPHYNVMGVAKAALEASVKYLAVDLG---PKNIRVNAISAGPIKTLAASGIGDFRYILKW  212 (272)
T ss_pred             ------------------cCCCcchhhhhHHHHHHHHHHHHHHHhc---ccCeEEEEeecCCcCCHHHhcCCcchHHHHH
Confidence                              6677888999999999999999999998   8899999999999999986543221111111


Q ss_pred             -HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          293 -TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       293 -~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                       ....|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       213 ~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        213 NEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             HHhCCcccccCCHHHHHHHHHHHhCccccCccceEEEECCCceee
Confidence             11346778899999999999765432 36689999999886543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-39  Score=291.25  Aligned_cols=243  Identities=14%  Similarity=0.199  Sum_probs=200.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++| +++.+++..+++.... +.++.++++|++|+++++++++++.
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998865 5666777776765433 4578999999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc--------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      +      .++++|++|||||+..        +..+.+.+++++.+++|+.+++.+++.++|.|++++ .|+||++||..+
T Consensus        83 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~  155 (260)
T PRK08416         83 E------DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGN  155 (260)
T ss_pred             H------hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEecccc
Confidence            8      6789999999998642        334567899999999999999999999999998765 689999999887


Q ss_pred             cccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-
Q 017580          210 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-  288 (369)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-  288 (369)
                      .                    .+.+....|++||+|++.++++|+.|+.   ++||+|++|+||+++|++.+..+.... 
T Consensus       156 ~--------------------~~~~~~~~Y~asK~a~~~~~~~la~el~---~~gi~v~~v~PG~i~T~~~~~~~~~~~~  212 (260)
T PRK08416        156 L--------------------VYIENYAGHGTSKAAVETMVKYAATELG---EKNIRVNAVSGGPIDTDALKAFTNYEEV  212 (260)
T ss_pred             c--------------------cCCCCcccchhhHHHHHHHHHHHHHHhh---hhCeEEEEEeeCcccChhhhhccCCHHH
Confidence            6                    5667778999999999999999999998   789999999999999998765432111 


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ........|++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       213 ~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        213 KAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            112223346678899999999999755432 24688988887764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-38  Score=289.49  Aligned_cols=239  Identities=15%  Similarity=0.163  Sum_probs=194.2

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++||+++||||++  |||+++|++|+++|++|++++|+ +++++..+++....  ..+..+.||++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            5789999999986  99999999999999999999998 45555566665543  2457889999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccccC-------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT-------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~-------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                            .++++|++|||||+...       ..+.+.++|++++++|+.+++.+++.+.|.++ +  +|+||++||.++. 
T Consensus        81 ------~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~--~g~Iv~iss~~~~-  150 (262)
T PRK07984         81 ------VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P--GSALLTLSYLGAE-  150 (262)
T ss_pred             ------hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C--CcEEEEEecCCCC-
Confidence                  67899999999997532       23567899999999999999999999999764 3  4899999998876 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~  290 (369)
                                         .+.+.+..|++||+|+.+|+++++.|++   ++||+||+|+||+|+|++....+..... .
T Consensus       151 -------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~  208 (262)
T PRK07984        151 -------------------RAIPNYNVMGLAKASLEANVRYMANAMG---PEGVRVNAISAGPIRTLAASGIKDFRKMLA  208 (262)
T ss_pred             -------------------CCCCCcchhHHHHHHHHHHHHHHHHHhc---ccCcEEeeeecCcccchHHhcCCchHHHHH
Confidence                               6667788999999999999999999998   8899999999999999976433221111 1


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ......|++++.+|+|+|+.+++++... ...+|..+..++|...
T Consensus       209 ~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        209 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  253 (262)
T ss_pred             HHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCccc
Confidence            1222346778999999999999655432 3568999988887654

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=288.03  Aligned_cols=244  Identities=23%  Similarity=0.308  Sum_probs=203.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.++++..  +.++.++.+|++++++++++++++.+ 
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   79 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVE-   79 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999999888888887654  35688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .++++|++|||||+..   +..+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+..     
T Consensus        80 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~-----  148 (254)
T PRK07478         80 -----RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHT-----  148 (254)
T ss_pred             -----hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhc-----
Confidence                 6689999999999853   445778899999999999999999999999998775 68999999987651     


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-HHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-AFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~  295 (369)
                                    .+.++...|++||+|++.++++++.|++   +.||+|++|+||+++|++.+......... .....
T Consensus       149 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~  211 (254)
T PRK07478        149 --------------AGFPGMAAYAASKAGLIGLTQVLAAEYG---AQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGL  211 (254)
T ss_pred             --------------cCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCEEEEEEeeCcccCcccccccCCHHHHHHHHhc
Confidence                          3456778999999999999999999997   78999999999999999876543211111 11222


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .+++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       212 ~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~  251 (254)
T PRK07478        212 HALKRMAQPEEIAQAALFLASDAASFVTGTALLVDGGVSI  251 (254)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCchhc
Confidence            35667889999999999765432 3568888888877543

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.6e-38  Score=292.80  Aligned_cols=242  Identities=14%  Similarity=0.143  Sum_probs=194.3

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc-------CC----CcEEEEEecC--C
Q 017580           60 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-------KD----ARLEAFQVDL--S  124 (369)
Q Consensus        60 ~~~~k~vlITGa--s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~-------~~----~~v~~~~~Dl--s  124 (369)
                      +++||++|||||  |+|||+++|++|+++|++|++ +|+.++++++..++++..       .+    .....+.+|+  +
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            488999999999  899999999999999999999 899999988887775321       11    1246788999  4


Q ss_pred             C------------------hHHHHHHHHHHHHHHhccCCCCCccEEEeccccc----cCCCCCCHHhHHHhhhhhhHHHH
Q 017580          125 S------------------FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAF  182 (369)
Q Consensus       125 ~------------------~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~  182 (369)
                      +                  +++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~------~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~  158 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKA------DFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFV  158 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHH------HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHH
Confidence            3                  3489999999988      678999999999753    45567899999999999999999


Q ss_pred             HHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchh-hhhhhhHHHHHHHHHHHHHHhCCCC
Q 017580          183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDK  261 (369)
Q Consensus       183 ~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~SK~a~~~~~~~la~el~~~~  261 (369)
                      ++++.++|.|++   .|+||++||.++.                    .+.+.. ..|++||+|+.+|+++|+.|++   
T Consensus       159 ~l~~~~~p~m~~---~G~II~isS~a~~--------------------~~~p~~~~~Y~asKaAl~~l~~~la~El~---  212 (303)
T PLN02730        159 SLLQHFGPIMNP---GGASISLTYIASE--------------------RIIPGYGGGMSSAKAALESDTRVLAFEAG---  212 (303)
T ss_pred             HHHHHHHHHHhc---CCEEEEEechhhc--------------------CCCCCCchhhHHHHHHHHHHHHHHHHHhC---
Confidence            999999999975   3899999999887                    555544 5799999999999999999997   


Q ss_pred             C-CCeEEEEecCCcccCCccccchhHHHHH-HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          262 S-RHVSVIAADPGVVKTNIMREVPSFLSLM-AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       262 ~-~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      + +||+||+|+||+|+|+|.+..+...... ......|++++.+|+|+|..+++++... ...+|+.+..++|...
T Consensus       213 ~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        213 RKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             cCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence            5 7999999999999999986532111111 1112235678899999999999665432 3568998888877544

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=286.71  Aligned_cols=246  Identities=20%  Similarity=0.216  Sum_probs=200.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++...  +.++..+++|++|+++++++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            44678999999999999999999999999999999999864 456666666554  457888999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|++|||||+..  +..+.+.+++++++++|+.++++++++++|.|++++ .|+||++||.++...  
T Consensus        81 ~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--  151 (254)
T PRK06114         81 EA------ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIV--  151 (254)
T ss_pred             HH------HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCC--
Confidence            88      6689999999999863  345678999999999999999999999999998765 689999999887621  


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.+....|++||+|+.+++++++.|+.   +.||+||+|+||+++|++.+.............
T Consensus       152 ----------------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~  212 (254)
T PRK06114        152 ----------------NRGLLQAHYNASKAGVIHLSKSLAMEWV---GRGIRVNSISPGYTATPMNTRPEMVHQTKLFEE  212 (254)
T ss_pred             ----------------CCCCCcchHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEeecCccCcccccccchHHHHHHHh
Confidence                            1122357899999999999999999998   889999999999999998753211111122233


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ..|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       213 ~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~~  252 (254)
T PRK06114        213 QTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGFV  252 (254)
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCccccCcCCceEEECcCEe
Confidence            457788999999999999654332 366899888887754

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.3e-38  Score=287.05  Aligned_cols=241  Identities=16%  Similarity=0.136  Sum_probs=190.8

Q ss_pred             CCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGa--s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++|+++||||  ++|||+++|++|+++|++|++++|... .++..+++.+..+  ....+++|++|+++++++++++.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHH
Confidence            57899999996  689999999999999999999876522 2222333333322  235789999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccccC-------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT-------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~-------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                            +++++|++|||||+..+       ..+.+.++|++.+++|+.++++++++++|+|.+   .|+||++||.++. 
T Consensus        81 ------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii~iss~~~~-  150 (260)
T PRK06997         81 ------HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAE-  150 (260)
T ss_pred             ------HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---CceEEEEeccccc-
Confidence                  56899999999998632       135678999999999999999999999999943   4899999998877 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LM  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~  290 (369)
                                         .+.+....|++||+|+.+++++|+.|++   ++||+||+|+||+|+|++......... ..
T Consensus       151 -------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~  208 (260)
T PRK06997        151 -------------------RVVPNYNTMGLAKASLEASVRYLAVSLG---PKGIRANGISAGPIKTLAASGIKDFGKILD  208 (260)
T ss_pred             -------------------cCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCccccchhccccchhhHHH
Confidence                               6667788999999999999999999998   889999999999999998654321111 11


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccC
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNS  336 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~~  336 (369)
                      ......|++++.+|+|+|+.+++++.. +...+|+.+..++|...-.
T Consensus       209 ~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~~~~  255 (260)
T PRK06997        209 FVESNAPLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGFNAVV  255 (260)
T ss_pred             HHHhcCcccccCCHHHHHHHHHHHhCccccCcceeEEEEcCChhhcc
Confidence            112234678889999999999965543 2367899998888765543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=5.3e-38  Score=284.54  Aligned_cols=244  Identities=30%  Similarity=0.393  Sum_probs=201.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..+.||+++|||+++|||+++|++|++.|++|++++|+++.+++..+++..... +.++..+.||++++++++++++...
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999988876543 4679999999999999999999988


Q ss_pred             HHHhccCC-CCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHH-HHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          138 QWLLDSDM-HSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIG-AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       138 ~~~~~~~~-~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~-~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      +      + ++++|+||||||...   +..+.+++.|+++|++|+.| .+.+.+.+.|++++++ .|.|+++||.++.  
T Consensus        84 ~------~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~--  154 (270)
T KOG0725|consen   84 E------KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGV--  154 (270)
T ss_pred             H------HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccc--
Confidence            8      4 699999999999874   45688999999999999995 6666666666666655 7999999999887  


Q ss_pred             ccccCCCcccccccccccCCCchh-hhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--h--HH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--S--FL  287 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~--~--~~  287 (369)
                                        .+.++. .+|++||+|+.+++|+++.|++   +.|||||+|+||.+.|++ +...  .  ..
T Consensus       155 ------------------~~~~~~~~~Y~~sK~al~~ltr~lA~El~---~~gIRvN~v~PG~i~T~~-~~~~~~~~~~~  212 (270)
T KOG0725|consen  155 ------------------GPGPGSGVAYGVSKAALLQLTRSLAKELA---KHGIRVNSVSPGLVKTSL-RAAGLDDGEME  212 (270)
T ss_pred             ------------------cCCCCCcccchhHHHHHHHHHHHHHHHHh---hcCcEEEEeecCcEeCCc-cccccccchhh
Confidence                              333333 7999999999999999999998   899999999999999998 2211  1  01


Q ss_pred             HHHH---HHHHHHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcccc
Q 017580          288 SLMA---FTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  335 (369)
Q Consensus       288 ~~~~---~~~~~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~~g~~~~  335 (369)
                      ....   .....|.+|+..|+|+|+.+.  |++++   ..+|+-+..++|....
T Consensus       213 ~~~~~~~~~~~~p~gr~g~~~eva~~~~--fla~~~asyitG~~i~vdgG~~~~  264 (270)
T KOG0725|consen  213 EFKEATDSKGAVPLGRVGTPEEVAEAAA--FLASDDASYITGQTIIVDGGFTVV  264 (270)
T ss_pred             HHhhhhccccccccCCccCHHHHHHhHH--hhcCcccccccCCEEEEeCCEEee
Confidence            1111   223457899999999999999  55544   5678888888777653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.2e-38  Score=285.76  Aligned_cols=236  Identities=19%  Similarity=0.234  Sum_probs=189.1

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGa--s~gIG~~~a~~La~~G~~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+++     +.++.++++|++|++++++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~   78 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASLADR   78 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHHHHH
Confidence            367899999999  89999999999999999999999874  3334443333     23577899999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      +.+      .++++|++|||||+..      +..+.+.+++++++++|+.+++++++.++|.|++   .|+||++||.. 
T Consensus        79 ~~~------~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~-  148 (256)
T PRK07889         79 VRE------HVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDA-  148 (256)
T ss_pred             HHH------HcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeecc-
Confidence            988      6689999999999862      3346678999999999999999999999999974   37999998753 


Q ss_pred             cccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH
Q 017580          210 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL  289 (369)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~  289 (369)
                      .                    .+.+.+..|++||+|+.+|+++|+.|++   ++||+||+|+||+++|++.+..+.....
T Consensus       149 ~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrvn~v~PG~v~T~~~~~~~~~~~~  205 (256)
T PRK07889        149 T--------------------VAWPAYDWMGVAKAALESTNRYLARDLG---PRGIRVNLVAAGPIRTLAAKAIPGFELL  205 (256)
T ss_pred             c--------------------ccCCccchhHHHHHHHHHHHHHHHHHhh---hcCeEEEeeccCcccChhhhcccCcHHH
Confidence            2                    3456677899999999999999999998   8899999999999999987654321111


Q ss_pred             -HHHHHHHHhh-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          290 -MAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       290 -~~~~~~~~~~-~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                       .......|++ ++.+|+|+|+.+++++... ...+|+++..++|..
T Consensus       206 ~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~  252 (256)
T PRK07889        206 EEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGAH  252 (256)
T ss_pred             HHHHHhcCccccccCCHHHHHHHHHHHhCcccccccceEEEEcCcee
Confidence             1112223555 5789999999999755432 356899988887754

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=283.07  Aligned_cols=240  Identities=20%  Similarity=0.231  Sum_probs=199.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|+++++++.++++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999988777766554     45688999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc-CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          139 WLLDSDMHSSIQLLINNAGILA-TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                            .++++|++|||||+.. ...+.+.+.+++.+++|+.+++.+++.++|.|+ ++ .|+||++||.++.       
T Consensus        77 ------~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~g~ii~isS~~~~-------  141 (261)
T PRK08265         77 ------RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-GGAIVNFTSISAK-------  141 (261)
T ss_pred             ------HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-CcEEEEECchhhc-------
Confidence                  5689999999999753 223568899999999999999999999999997 33 5899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHH-H-HH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMA-F-TV  294 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~-~-~~  294 (369)
                                   .+.++...|++||+++..++++++.|+.   +.||+||+|+||+++|++.+....... ... . ..
T Consensus       142 -------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~  205 (261)
T PRK08265        142 -------------FAQTGRWLYPASKAAIRQLTRSMAMDLA---PDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP  205 (261)
T ss_pred             -------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc
Confidence                         6667788999999999999999999998   789999999999999998754321111 111 1 11


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ..|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       206 ~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~~~  246 (261)
T PRK08265        206 FHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGYSA  246 (261)
T ss_pred             cCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCCeec
Confidence            236778899999999999665332 3568998888888654

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-37  Score=278.32  Aligned_cols=244  Identities=27%  Similarity=0.332  Sum_probs=194.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-CCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++|+++||||++|||+++|++|+++|++|++++ |+.+..++...++...  +.++..+.+|+++.+++..+++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            3589999999999999999999999999998875 5667777777776554  446788999999999999999988764


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                      +.+....+++|+||||||+..  +..+.+.+.|++++++|+.++++++++++|.|++   .|+||++||.++.       
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~-------  149 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATR-------  149 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCcccc-------
Confidence            422111248999999999753  3456788999999999999999999999999965   3799999999987       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH-HHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT-VLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~  296 (369)
                                   .+.+....|++||+|+++++++++.|++   +.||+||+|+||+|+|++.++........... ...
T Consensus       150 -------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  213 (252)
T PRK12747        150 -------------ISLPDFIAYSMTKGAINTMTFTLAKQLG---ARGITVNAILPGFIKTDMNAELLSDPMMKQYATTIS  213 (252)
T ss_pred             -------------cCCCCchhHHHHHHHHHHHHHHHHHHHh---HcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcC
Confidence                         6667788999999999999999999998   88999999999999999976532211111111 122


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      +++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       214 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        214 AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             cccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            5678899999999999654322 25689888887764

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.5e-37  Score=290.34  Aligned_cols=215  Identities=22%  Similarity=0.255  Sum_probs=177.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|||||+|||+++|++|+++|++|++++|++++++++.+++++.+++.++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            4899999999999999999999999999999999999999999998876656688999999985  23344444444331


Q ss_pred             ccCCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          142 DSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                          ..++|++|||||+..    +..+.+.+++++++++|+.|++.+++.++|.|.+++ .|+||++||.++...     
T Consensus       130 ----~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~-----  199 (320)
T PLN02780        130 ----GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVI-----  199 (320)
T ss_pred             ----CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccC-----
Confidence                235789999999863    245778999999999999999999999999998776 699999999887510     


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.|....|++||+++++|+++|+.|++   +.||+|++|+||+|+|+|.......           
T Consensus       200 -------------~~~p~~~~Y~aSKaal~~~~~~L~~El~---~~gI~V~~v~PG~v~T~~~~~~~~~-----------  252 (320)
T PLN02780        200 -------------PSDPLYAVYAATKAYIDQFSRCLYVEYK---KSGIDVQCQVPLYVATKMASIRRSS-----------  252 (320)
T ss_pred             -------------CCCccchHHHHHHHHHHHHHHHHHHHHh---ccCeEEEEEeeCceecCcccccCCC-----------
Confidence                         1246788999999999999999999998   8899999999999999997521110           


Q ss_pred             hhCCCCHHHHHHHHHHHhc
Q 017580          298 LGLLQSPEKGINSVLDAAL  316 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l  316 (369)
                       ....+|+++|+.++..+.
T Consensus       253 -~~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        253 -FLVPSSDGYARAALRWVG  270 (320)
T ss_pred             -CCCCCHHHHHHHHHHHhC
Confidence             013599999999998763

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=3.7e-37  Score=279.16  Aligned_cols=241  Identities=19%  Similarity=0.252  Sum_probs=197.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++++..  ++..+++...  +.++..+++|++|.++++++++++.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999887643  3444555433  45788999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||+..  +..+.+.+++++++++|+.+++.++++++|.|.+++.+|+||++||..+.      
T Consensus        82 ------~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~------  149 (253)
T PRK08993         82 ------EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSF------  149 (253)
T ss_pred             ------HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhc------
Confidence                  5688999999999863  34577889999999999999999999999999776435899999999877      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~  295 (369)
                                    .+.+....|++||+|+++++++++.|+.   +.||+|++|+||+++|++......... .......
T Consensus       150 --------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~  212 (253)
T PRK08993        150 --------------QGGIRVPSYTASKSGVMGVTRLMANEWA---KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDR  212 (253)
T ss_pred             --------------cCCCCCcchHHHHHHHHHHHHHHHHHhh---hhCeEEEEEeeCcccCcchhhhccchHHHHHHHhc
Confidence                          5566677999999999999999999998   789999999999999998765422111 1112233


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .|.+++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       213 ~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        213 IPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDGGW  250 (253)
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCE
Confidence            46678899999999999655432 25688888877764

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-37  Score=284.01  Aligned_cols=238  Identities=22%  Similarity=0.266  Sum_probs=197.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc---------chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS---------HLLSETMADITSRNKDARLEAFQVDLSSFQSVLK  131 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~---------~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~  131 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|+.         +.++++.+++...  +.++.++.+|++|++++.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHH
Confidence            5789999999999999999999999999999998876         6677777777654  4568899999999999999


Q ss_pred             HHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-----CCCeEEEE
Q 017580          132 FKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNV  204 (369)
Q Consensus       132 ~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~~g~IV~v  204 (369)
                      +++++.+      .++++|++|||||+..  +..+.+.++|++++++|+.++++++++++|.|+++.     ..|+||++
T Consensus        82 ~~~~~~~------~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~i  155 (286)
T PRK07791         82 LVDAAVE------TFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINT  155 (286)
T ss_pred             HHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEe
Confidence            9999988      6789999999999863  345788999999999999999999999999997542     13799999


Q ss_pred             cCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017580          205 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  284 (369)
Q Consensus       205 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~  284 (369)
                      ||.++.                    .+.++...|++||+|+.+++++|+.|++   +.||+||+|+|| ++|++.....
T Consensus       156 sS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v~Pg-~~T~~~~~~~  211 (286)
T PRK07791        156 SSGAGL--------------------QGSVGQGNYSAAKAGIAALTLVAAAELG---RYGVTVNAIAPA-ARTRMTETVF  211 (286)
T ss_pred             CchhhC--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHH---HhCeEEEEECCC-CCCCcchhhH
Confidence            999887                    6777889999999999999999999998   789999999999 8999864321


Q ss_pred             hHHHHHHHHHHHHhh--CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          285 SFLSLMAFTVLKLLG--LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       285 ~~~~~~~~~~~~~~~--~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ..     .....+.+  +..+|+|+|+.+++++... ...+|+++..++|....
T Consensus       212 ~~-----~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~  260 (286)
T PRK07791        212 AE-----MMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKISV  260 (286)
T ss_pred             HH-----HHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceEE
Confidence            10     01111222  3569999999999765432 35789999999887654

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=3.8e-37  Score=279.89  Aligned_cols=233  Identities=22%  Similarity=0.297  Sum_probs=194.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+.             ..++.++++|++|+++++++++++.+
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~   68 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVIS   68 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998643             12578899999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||+.  .+..+.+.++|++++++|+.|++.+++.++|+|++++ .|+||++||..+.      
T Consensus        69 ------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------  135 (258)
T PRK06398         69 ------KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSF------  135 (258)
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhc------
Confidence                  678899999999985  3455778999999999999999999999999998765 6899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh------HHH--
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS------FLS--  288 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~------~~~--  288 (369)
                                    .+.++...|++||+|+++++++++.|+.   + +|+||+|+||+++|++.+....      ...  
T Consensus       136 --------------~~~~~~~~Y~~sKaal~~~~~~la~e~~---~-~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~  197 (258)
T PRK06398        136 --------------AVTRNAAAYVTSKHAVLGLTRSIAVDYA---P-TIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVE  197 (258)
T ss_pred             --------------cCCCCCchhhhhHHHHHHHHHHHHHHhC---C-CCEEEEEecCCccchHHhhhhhccccCChhhhH
Confidence                          6677888999999999999999999996   4 4999999999999998754210      000  


Q ss_pred             --HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          289 --LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       289 --~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                        ........|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       198 ~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        198 RKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGLRAL  247 (258)
T ss_pred             HHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCccccC
Confidence              011122346678889999999999765432 35689999888886543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-37  Score=278.45  Aligned_cols=237  Identities=16%  Similarity=0.135  Sum_probs=196.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||++|||+++|++|+++|++|++++|++++++++.+++.+.   .++.++++|++|+++++++++++.+      
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~------   72 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWE------   72 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHH------
Confidence            6999999999999999999999999999999998888888887543   3678999999999999999999988      


Q ss_pred             CCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          145 MHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                      .++++|++|||||...    +..+.+.+++.+.+++|+.+++++++.++|.|.+.+..|+||++||.++.          
T Consensus        73 ~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~----------  142 (259)
T PRK08340         73 LLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK----------  142 (259)
T ss_pred             hcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC----------
Confidence            6789999999999752    24466788999999999999999999999998743336899999999887          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HHH-H
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FLS-L  289 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~~~-~  289 (369)
                                .+.+....|++||+++.+++++|+.|++   +.||+|++|+||+++|++.+....          ... .
T Consensus       143 ----------~~~~~~~~y~~sKaa~~~~~~~la~e~~---~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  209 (259)
T PRK08340        143 ----------EPMPPLVLADVTRAGLVQLAKGVSRTYG---GKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWE  209 (259)
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHHhC---CCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHH
Confidence                      6677788999999999999999999998   889999999999999998753211          000 0


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .......|++|+.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       210 ~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        210 REVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             HHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecCCcC
Confidence            11222346788999999999999544322 256899888887743

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-37  Score=276.52  Aligned_cols=242  Identities=16%  Similarity=0.232  Sum_probs=203.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++..+.+|++|+++++++++++.+ 
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   82 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEK-   82 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999998888888777654  35678899999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||...  +..+.+.++|++++++|+.+++.+++.+.+.|.+++ .++||++||..+.       
T Consensus        83 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-------  149 (254)
T PRK08085         83 -----DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSE-------  149 (254)
T ss_pred             -----hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhc-------
Confidence                 6789999999999763  445778999999999999999999999999997665 6899999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~  296 (369)
                                   .+.+....|++||++++.+++++++|++   +.||++|+|+||+++|++.+........ .......
T Consensus       150 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~  213 (254)
T PRK08085        150 -------------LGRDTITPYAASKGAVKMLTRGMCVELA---RHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRT  213 (254)
T ss_pred             -------------cCCCCCcchHHHHHHHHHHHHHHHHHHH---hhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcC
Confidence                         5666778999999999999999999998   7899999999999999987653221111 1122234


Q ss_pred             HhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      |++++.+|+|+|+.+++++.. +...+|+.+..++|..
T Consensus       214 p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~~  251 (254)
T PRK08085        214 PAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGML  251 (254)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence            677889999999999965543 2366899888887753

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=9.3e-37  Score=280.31  Aligned_cols=244  Identities=20%  Similarity=0.240  Sum_probs=203.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++++|+++++++..+++++.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988888877777553  45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccccC-----------------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeE
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT-----------------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI  201 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~-----------------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~I  201 (369)
                            .++++|++|||||+..+                 ..+.+.+++++.+++|+.+++.+++.++|.|.+++ .|+|
T Consensus        84 ------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~i  156 (278)
T PRK08277         84 ------DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNI  156 (278)
T ss_pred             ------HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEE
Confidence                  66899999999996522                 34567899999999999999999999999998775 6899


Q ss_pred             EEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017580          202 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR  281 (369)
Q Consensus       202 V~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~  281 (369)
                      |++||..+.                    .+.++...|++||+|++.++++++.|+.   +.+|+||+|+||+++|++.+
T Consensus       157 i~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~girvn~v~Pg~v~t~~~~  213 (278)
T PRK08277        157 INISSMNAF--------------------TPLTKVPAYSAAKAAISNFTQWLAVHFA---KVGIRVNAIAPGFFLTEQNR  213 (278)
T ss_pred             EEEccchhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhC---ccCeEEEEEEeccCcCcchh
Confidence            999999987                    6677788999999999999999999998   78999999999999999865


Q ss_pred             cchhH------HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCccc
Q 017580          282 EVPSF------LSLMAFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       282 ~~~~~------~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~--~~~~sG~~~~~~~g~~~  334 (369)
                      .....      ..........|++++.+|+|+|+++++++..  +...+|+.+..++|...
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        214 ALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             hhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence            43110      0111112234677889999999999965543  23568999988888543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=276.66  Aligned_cols=244  Identities=20%  Similarity=0.241  Sum_probs=201.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +..++++|+++||||++|||++++++|+++|++|++++|+ +..+++.+.+.+.  +.++.++++|+++.+++.++++++
T Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~   85 (258)
T PRK06935          9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEA   85 (258)
T ss_pred             ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            3345789999999999999999999999999999999998 5566666665443  457889999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.|++++ .|+||++||..+.    
T Consensus        86 ~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~----  154 (258)
T PRK06935         86 LE------EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSF----  154 (258)
T ss_pred             HH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhc----
Confidence            98      6688999999999863  345678899999999999999999999999998775 6899999999877    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFT  293 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~  293 (369)
                                      .+.+....|++||+|++++++++++|+.   +.||+||+|+||+++|++.+....... .....
T Consensus       155 ----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~  215 (258)
T PRK06935        155 ----------------QGGKFVPAYTASKHGVAGLTKAFANELA---AYNIQVNAIAPGYIKTANTAPIRADKNRNDEIL  215 (258)
T ss_pred             ----------------cCCCCchhhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEeccccccchhhcccChHHHHHHH
Confidence                            5667778999999999999999999998   789999999999999998754332111 11222


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ...+.+++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       216 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  256 (258)
T PRK06935        216 KRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGGWL  256 (258)
T ss_pred             hcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence            2345678899999999999654322 256888888887743

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=275.10  Aligned_cols=241  Identities=20%  Similarity=0.247  Sum_probs=202.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.++++++.+++.+.  +.++..+++|+++.++++++++++.+ 
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   81 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE-   81 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            577899999999999999999999999999999999988888888877654  34678899999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .++++|++|||||..   .+..+.+.+.+++.+++|+.+++.++++++|+|++++ .++||++||..+.      
T Consensus        82 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~------  149 (252)
T PRK07035         82 -----RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGV------  149 (252)
T ss_pred             -----HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhc------
Confidence                 568899999999964   3445678899999999999999999999999998765 6899999998877      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~  295 (369)
                                    .+.++...|++||++++++++++++|+.   +.||+|++|+||+++|++.+....... .......
T Consensus       150 --------------~~~~~~~~Y~~sK~al~~~~~~l~~e~~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~  212 (252)
T PRK07035        150 --------------SPGDFQGIYSITKAAVISMTKAFAKECA---PFGIRVNALLPGLTDTKFASALFKNDAILKQALAH  212 (252)
T ss_pred             --------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCEEEEEEeeccccCcccccccCCHHHHHHHHcc
Confidence                          6667788999999999999999999997   789999999999999998765422111 1112223


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      .+.+++.+|+|+|+.+++++.... ..+|+.+..++|.
T Consensus       213 ~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg~  250 (252)
T PRK07035        213 IPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGGY  250 (252)
T ss_pred             CCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            356678899999999996544332 5689988877663

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-36  Score=274.58  Aligned_cols=243  Identities=20%  Similarity=0.203  Sum_probs=201.8

Q ss_pred             CCCCCCEEEEeCCCC-chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATS-GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~-gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..+++|+++||||+| |||+++++.|+++|++|++++|+.+++++..+++++..+..++..+++|++++++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            346789999999985 9999999999999999999999998888888887664444578899999999999999999998


Q ss_pred             HHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|++|||||..  .+..+.+.+.+++.+++|+.+++.+++.++|.|+.+...|+||++||..+.     
T Consensus        93 ~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~-----  161 (262)
T PRK07831         93 E------RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW-----  161 (262)
T ss_pred             H------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc-----
Confidence            7      568899999999975  344567889999999999999999999999999876435899999998877     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||+|+++++++++.|++   +.+|+|++|+||+++|++................
T Consensus       162 ---------------~~~~~~~~Y~~sKaal~~~~~~la~e~~---~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~  223 (262)
T PRK07831        162 ---------------RAQHGQAHYAAAKAGVMALTRCSALEAA---EYGVRINAVAPSIAMHPFLAKVTSAELLDELAAR  223 (262)
T ss_pred             ---------------CCCCCCcchHHHHHHHHHHHHHHHHHhC---ccCeEEEEEeeCCccCcccccccCHHHHHHHHhc
Confidence                           5566778999999999999999999998   7899999999999999987643222211222233


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGK  330 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~  330 (369)
                      .+++++.+|+|+|+.+++++... ...+|+.+..++
T Consensus       224 ~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        224 EAFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence            46778899999999999654432 256888887665

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-36  Score=274.98  Aligned_cols=242  Identities=23%  Similarity=0.262  Sum_probs=204.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||.++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|+++.+++.++++++.+ 
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~-   80 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA-   80 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999998888877777554  45789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .++++|++|||||...   +..+.+.+++++++++|+.+++.++++++|.|.+++ .++||++||..+.      
T Consensus        81 -----~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~------  148 (253)
T PRK06172         81 -----AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGL------  148 (253)
T ss_pred             -----HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhc------
Confidence                 5688999999999853   245678899999999999999999999999998765 5899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLSLMAFTV  294 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~  294 (369)
                                    .+.++...|++||+++++++++++.|+.   +.||+|++|+||+++|++.+....  .........
T Consensus       149 --------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~  211 (253)
T PRK06172        149 --------------GAAPKMSIYAASKHAVIGLTKSAAIEYA---KKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAA  211 (253)
T ss_pred             --------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCCccChhhhhhcccChHHHHHHhc
Confidence                          6677888999999999999999999997   789999999999999999775422  111111222


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ..+.+++.+|+|+|+.+++++... ...+|+++..++|..
T Consensus       212 ~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~~  251 (253)
T PRK06172        212 MHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGAT  251 (253)
T ss_pred             cCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            345667889999999999765543 367899998888764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.9e-36  Score=274.96  Aligned_cols=233  Identities=24%  Similarity=0.308  Sum_probs=192.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----CCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSR----EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~----~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++||||++|||+++|++|++    .|++|++++|++++++++.++++...++.++.++.+|++++++++++++++.+. 
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~-   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL-   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc-
Confidence            689999999999999999997    799999999999999998888876444567899999999999999999998873 


Q ss_pred             hccCCCCC----ccEEEeccccccC----CCC-CCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccc
Q 017580          141 LDSDMHSS----IQLLINNAGILAT----SSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHR  210 (369)
Q Consensus       141 ~~~~~~~~----id~lv~nAG~~~~----~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~~~  210 (369)
                           +++    .|++|||||+...    ..+ .+.+.+++.+++|+.+++.+++.++|.|++++ ..++||++||.++.
T Consensus        81 -----~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~  155 (256)
T TIGR01500        81 -----PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI  155 (256)
T ss_pred             -----cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC
Confidence                 332    3699999997532    122 25789999999999999999999999998653 24799999999887


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----H
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----F  286 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----~  286 (369)
                                          .+.++...|++||+|+++|+++|+.|++   +.+|+|++|+||+|+|+|.+....    .
T Consensus       156 --------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~~i~v~~v~PG~v~T~~~~~~~~~~~~~  212 (256)
T TIGR01500       156 --------------------QPFKGWALYCAGKAARDMLFQVLALEEK---NPNVRVLNYAPGVLDTDMQQQVREESVDP  212 (256)
T ss_pred             --------------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCCcccchHHHHHHHhcCCh
Confidence                                6777888999999999999999999998   789999999999999999764321    1


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF  326 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~  326 (369)
                      ..........|++++.+|+|+|+.+++++-.....+|+++
T Consensus       213 ~~~~~~~~~~~~~~~~~p~eva~~~~~l~~~~~~~~G~~~  252 (256)
T TIGR01500       213 DMRKGLQELKAKGKLVDPKVSAQKLLSLLEKDKFKSGAHV  252 (256)
T ss_pred             hHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCcCCccee
Confidence            1112233456788899999999999987754456677665

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.9e-36  Score=273.58  Aligned_cols=244  Identities=19%  Similarity=0.229  Sum_probs=202.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..+++.++++..  +.++.++.+|+++.+++.++++.+.+ 
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~-   84 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALS-   84 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999988888887777554  45788999999999999999999887 


Q ss_pred             HhccCCCCCccEEEeccccccC-CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          140 LLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                           ..+++|++|||||...+ ..+.+.+.+++.+++|+.++++++++++|.|.+.+ .++||++||.++.        
T Consensus        85 -----~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~--------  150 (255)
T PRK06113         85 -----KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE--------  150 (255)
T ss_pred             -----HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEeccccc--------
Confidence                 56889999999998632 23678899999999999999999999999997655 5899999998877        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++...|++||+|+++++++++.++.   +.+|+||+|+||+++|++.+...............++
T Consensus       151 ------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  215 (255)
T PRK06113        151 ------------NKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI  215 (255)
T ss_pred             ------------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEecccccccccccccCHHHHHHHHhcCCC
Confidence                        5667778999999999999999999997   7899999999999999987653211111112223355


Q ss_pred             hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          299 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      +++.+|+|+|+++++++... ...+|+.+..++|...+
T Consensus       216 ~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~~~  253 (255)
T PRK06113        216 RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcccc
Confidence            67889999999999765321 24689999988886543

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-36  Score=273.86  Aligned_cols=237  Identities=19%  Similarity=0.226  Sum_probs=194.5

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCC-----------cchHHHHHHHHHhhcCCCcEEEEEecCCCh
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRS-----------SHLLSETMADITSRNKDARLEAFQVDLSSF  126 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~-----------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~  126 (369)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+           .+...+..+++++.  +.++.++++|+++.
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            4789999999999  599999999999999999998643           12233444445433  56789999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEE
Q 017580          127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV  204 (369)
Q Consensus       127 ~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~v  204 (369)
                      ++++++++++.+      ..+++|++|||||..  .+..+.+.+++++++++|+.+++.+++.++|.|++++ .|+||++
T Consensus        81 ~~i~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i  153 (256)
T PRK12859         81 DAPKELLNKVTE------QLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINM  153 (256)
T ss_pred             HHHHHHHHHHHH------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEE
Confidence            999999999988      568899999999975  3456789999999999999999999999999998765 6899999


Q ss_pred             cCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017580          205 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  284 (369)
Q Consensus       205 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~  284 (369)
                      ||..+.                    .+.++...|++||+++.+|+++++.++.   +++|+|++|+||+++|++.... 
T Consensus       154 sS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~v~PG~i~t~~~~~~-  209 (256)
T PRK12859        154 TSGQFQ--------------------GPMVGELAYAATKGAIDALTSSLAAEVA---HLGITVNAINPGPTDTGWMTEE-  209 (256)
T ss_pred             cccccC--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEEccccCCCCCHH-
Confidence            999887                    6777889999999999999999999998   7899999999999999975321 


Q ss_pred             hHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          285 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                        . ........|++++.+|+|+|+.+++++... ...+|+++..++|.
T Consensus       210 --~-~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        210 --I-KQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             --H-HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence              0 111122335567889999999999765442 36789999888773

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3e-36  Score=274.40  Aligned_cols=247  Identities=21%  Similarity=0.312  Sum_probs=203.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+. +..+...+++...  +.++.++.+|++|.++++++++++.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            47799999999999999999999999999999998854 4556666666543  45788999999999999999999888


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||...  +..+.+.+.+++++++|+.+++.+++.++|.|.+++..|+||++||..+.      
T Consensus        82 ------~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------  149 (261)
T PRK08936         82 ------EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------  149 (261)
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------
Confidence                  6689999999999864  34467889999999999999999999999999876545899999998776      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~  295 (369)
                                    .+.++...|++||+|+.+++++++.++.   +.+|+|++|+||+++|++.+.. +...........
T Consensus       150 --------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~  212 (261)
T PRK08936        150 --------------IPWPLFVHYAASKGGVKLMTETLAMEYA---PKGIRVNNIGPGAINTPINAEKFADPKQRADVESM  212 (261)
T ss_pred             --------------CCCCCCcccHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEECcCCCCccccccCCHHHHHHHHhc
Confidence                          6677888999999999999999999998   7899999999999999986542 221111122223


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSS  337 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~  337 (369)
                      .+++++.+|+|+|+.+++++... ...+|..+..++|..+.++
T Consensus       213 ~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~~~~~~  255 (261)
T PRK08936        213 IPMGYIGKPEEIAAVAAWLASSEASYVTGITLFADGGMTLYPS  255 (261)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCcccCcc
Confidence            46678899999999999765432 3678999998888775544

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.6e-36  Score=279.37  Aligned_cols=240  Identities=20%  Similarity=0.201  Sum_probs=195.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.  +..+++.+.+...  +.++.++.+|+++.+++.++++++.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            57889999999999999999999999999999988754  3455555444333  4568889999999999999999998


Q ss_pred             HHHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      +      .++++|++|||||..   .+..+.+.+++++++++|+.+++.++++++|.|++   .|+||++||..+.    
T Consensus       124 ~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~----  190 (294)
T PRK07985        124 K------ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAY----  190 (294)
T ss_pred             H------HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhc----
Confidence            8      668999999999974   34557789999999999999999999999999964   3799999999887    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAFT  293 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~~~~~~~  293 (369)
                                      .+.+...+|++||+|+++++++++.|++   +.||+||+|+||+|+|++..... .........
T Consensus       191 ----------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~  251 (294)
T PRK07985        191 ----------------QPSPHLLDYAATKAAILNYSRGLAKQVA---EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFG  251 (294)
T ss_pred             ----------------cCCCCcchhHHHHHHHHHHHHHHHHHHh---HhCcEEEEEECCcCccccccccCCCHHHHHHHh
Confidence                            6667778999999999999999999997   78999999999999999853211 111111222


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ...+++++.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       252 ~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~~  292 (294)
T PRK07985        252 QQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEH  292 (294)
T ss_pred             ccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCee
Confidence            3346778899999999999654332 256799988888753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=277.70  Aligned_cols=237  Identities=20%  Similarity=0.240  Sum_probs=193.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++++++++++++++.+  
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~--   76 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVD--   76 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH--
Confidence            57899999999999999999999999999999999988777665554     34678899999999999999999988  


Q ss_pred             hccCCCCCccEEEecccccc---CCCCCCHHh----HHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          141 LDSDMHSSIQLLINNAGILA---TSSRLTPEG----YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~----~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                          .++++|++|||||+..   +..+.+.+.    |++++++|+.+++.+++.++|.|++++  |+||++||.++.   
T Consensus        77 ----~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~---  147 (263)
T PRK06200         77 ----AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG--GSMIFTLSNSSF---  147 (263)
T ss_pred             ----hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC--CEEEEECChhhc---
Confidence                6789999999999853   333555554    889999999999999999999987654  899999999887   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---------
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---------  284 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~---------  284 (369)
                                       .+.++...|++||+|++.++++++.|++   + +|+||+|+||+++|++.....         
T Consensus       148 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~el~---~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~  206 (263)
T PRK06200        148 -----------------YPGGGGPLYTASKHAVVGLVRQLAYELA---P-KIRVNGVAPGGTVTDLRGPASLGQGETSIS  206 (263)
T ss_pred             -----------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---c-CcEEEEEeCCccccCCcCccccCCCCcccc
Confidence                             5666778999999999999999999996   4 599999999999999864210         


Q ss_pred             h-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCccc
Q 017580          285 S-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTV  334 (369)
Q Consensus       285 ~-~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~~~g~~~  334 (369)
                      . ...........|++++.+|+|+|+.+++++...  ...+|+.+..++|...
T Consensus       207 ~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        207 DSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             cccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCceee
Confidence            0 001111223347788999999999999544322  2468999988888554

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.4e-36  Score=273.38  Aligned_cols=244  Identities=20%  Similarity=0.257  Sum_probs=206.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....++.++.++.+|+++++++.++++++.+ 
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-   84 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED-   84 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999999998888888887766667899999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||..  .+..+.+.+++++.+++|+.+++.++++++|+|++++ .++||++||..+.       
T Consensus        85 -----~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~-------  151 (257)
T PRK09242         85 -----HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGL-------  151 (257)
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccC-------
Confidence                 678999999999975  2345778999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~  296 (369)
                                   .+.++...|++||+++..++++++.|+.   +.+|++++++||+++|++.+....... ........
T Consensus       152 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~  215 (257)
T PRK09242        152 -------------THVRSGAPYGMTKAALLQMTRNLAVEWA---EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERT  215 (257)
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHHH---HhCeEEEEEEECCCCCcccccccCChHHHHHHHhcC
Confidence                         6667778999999999999999999997   789999999999999999765422111 11112234


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      +++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       216 ~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~  253 (257)
T PRK09242        216 PMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGGFL  253 (257)
T ss_pred             CCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCeE
Confidence            5667889999999999766432 245788888777654

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.4e-36  Score=279.56  Aligned_cols=240  Identities=22%  Similarity=0.236  Sum_probs=196.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc--hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++|+++||||++|||+++|++|+++|++|++++++.+  ..+++.+.++..  +.++.++.+|+++.++++++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            477899999999999999999999999999999887643  345555555543  4578899999999999999999998


Q ss_pred             HHHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      +      .++++|++|||||..   .+..+.+.+++++++++|+.|+++++++++|.|+.   .++||++||..++    
T Consensus       130 ~------~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~----  196 (300)
T PRK06128        130 K------ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSY----  196 (300)
T ss_pred             H------HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCcccc----
Confidence            8      568899999999975   24457789999999999999999999999999864   3799999999887    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAFT  293 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~~~~~~~  293 (369)
                                      .+.+....|++||+|++.|+++|+.|+.   +.||+||+|+||+++|++..... .........
T Consensus       197 ----------------~~~~~~~~Y~asK~a~~~~~~~la~el~---~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~  257 (300)
T PRK06128        197 ----------------QPSPTLLDYASTKAAIVAFTKALAKQVA---EKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFG  257 (300)
T ss_pred             ----------------CCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEECcCcCCCcccCCCCHHHHHHHh
Confidence                            6667788899999999999999999997   78999999999999999865321 111111122


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ...+++++.+|+|+|..+++++... ...+|+.+..++|..
T Consensus       258 ~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~  298 (300)
T PRK06128        258 SETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLL  298 (300)
T ss_pred             cCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEe
Confidence            2346778899999999999654332 245799998888764

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3e-38  Score=254.99  Aligned_cols=233  Identities=23%  Similarity=0.291  Sum_probs=202.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++.|+.+++||+.-|||+++++.|++.|++|+.++|+++.+..+.++.     ...+..+..|+++++.+.+...    
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~----   73 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLV----   73 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhc----
Confidence            3578999999999999999999999999999999999999888887765     4458999999999887766554    


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            ..+++|.+|||||+.  .|+.+++.+.++++|+||+.+.+++.+.+.+.+..+..+|.||++||.++.      
T Consensus        74 ------~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~------  141 (245)
T KOG1207|consen   74 ------PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI------  141 (245)
T ss_pred             ------ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc------
Confidence                  458899999999986  678899999999999999999999999988877766667999999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~  295 (369)
                                    .+..+.+.|+++|+|+++++++|+.|++   +.+||||+|+|-.|.|+|.+. +........+..+
T Consensus       142 --------------R~~~nHtvYcatKaALDmlTk~lAlELG---p~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~r  204 (245)
T KOG1207|consen  142 --------------RPLDNHTVYCATKAALDMLTKCLALELG---PQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDR  204 (245)
T ss_pred             --------------cccCCceEEeecHHHHHHHHHHHHHhhC---cceeEeeccCCeEEEecccccccCCchhccchhhh
Confidence                          8888999999999999999999999998   999999999999999999875 4555555566777


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKG  331 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~~g  331 (369)
                      .|++|+...+|+.++++  |+.++   ..+|..+..++|
T Consensus       205 iPl~rFaEV~eVVnA~l--fLLSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  205 IPLKRFAEVDEVVNAVL--FLLSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             CchhhhhHHHHHHhhhe--eeeecCcCcccCceeeecCC
Confidence            89999999999999999  44454   346777666554

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-36  Score=272.95  Aligned_cols=245  Identities=17%  Similarity=0.264  Sum_probs=205.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++++|++++++++++++++.+ 
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   83 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEK-   83 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999998888887777653  45789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ..+++|++|||||+..  +..+.+.+.+++++++|+.+++.+++.++|.|++++ .++||++||..+.       
T Consensus        84 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  150 (265)
T PRK07097         84 -----EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSE-------  150 (265)
T ss_pred             -----hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCcccc-------
Confidence                 5688999999999864  345678899999999999999999999999998765 6899999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh------HHHHH-
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS------FLSLM-  290 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~------~~~~~-  290 (369)
                                   .+.++...|++||+++..+++++++|+.   +.||+|++|+||+++|++......      ..... 
T Consensus       151 -------------~~~~~~~~Y~~sKaal~~l~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  214 (265)
T PRK07097        151 -------------LGRETVSAYAAAKGGLKMLTKNIASEYG---EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQ  214 (265)
T ss_pred             -------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCceEEEEEeccccccchhhhhhccccccchhHHH
Confidence                         5667788999999999999999999998   789999999999999998754321      00111 


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccC
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  336 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~  336 (369)
                      ......+.+++.+|+|+|+.+++++... +..+|+.+..++|...+.
T Consensus       215 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~  261 (265)
T PRK07097        215 FIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGILAYI  261 (265)
T ss_pred             HHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCceecc
Confidence            1112234567889999999999876653 467899988888765543

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=4.4e-36  Score=272.44  Aligned_cols=240  Identities=24%  Similarity=0.300  Sum_probs=200.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++++|++++++++++++++.+    
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~----   75 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVD----   75 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH----
Confidence            689999999999999999999999999999999998888887777554  35788999999999999999999988    


Q ss_pred             cCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        .++++|++|||||+.  .+..+.+.+.+++.+++|+.+++.+++.+++.|++.+..++||++||..+.          
T Consensus        76 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----------  143 (256)
T PRK08643         76 --TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV----------  143 (256)
T ss_pred             --HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc----------
Confidence              568899999999975  334567889999999999999999999999999876535899999998877          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH--------HH--HH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF--------LS--LM  290 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~--------~~--~~  290 (369)
                                .+.++...|++||++++.+++.++.|+.   +.||+|++|+||+++|++..+....        ..  ..
T Consensus       144 ----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  210 (256)
T PRK08643        144 ----------VGNPELAVYSSTKFAVRGLTQTAARDLA---SEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGME  210 (256)
T ss_pred             ----------cCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHH
Confidence                      5667778999999999999999999997   7899999999999999987543211        00  11


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ......+.+++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~~  254 (256)
T PRK08643        211 QFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGMV  254 (256)
T ss_pred             HHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCee
Confidence            1122235678889999999999655432 257899998887753

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=4.8e-36  Score=270.83  Aligned_cols=241  Identities=24%  Similarity=0.287  Sum_probs=195.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||.++|++|+++|++|++++|+..  .+..+.+.+.  +.++.++++|+++++++.++++++.+ 
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVE-   76 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            367899999999999999999999999999999999752  3444444433  45689999999999999999999887 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ..+++|++|||||...  +..+.+.+.+++.+++|+.+++.++++++|.|.+++..|+||++||..+.       
T Consensus        77 -----~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------  144 (248)
T TIGR01832        77 -----EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF-------  144 (248)
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc-------
Confidence                 5678999999999864  34467889999999999999999999999999765435899999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~  296 (369)
                                   .+.+....|++||++++++++++++|+.   ++||+|++|+||+++|++.+...... .........
T Consensus       145 -------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  208 (248)
T TIGR01832       145 -------------QGGIRVPSYTASKHGVAGLTKLLANEWA---AKGINVNAIAPGYMATNNTQALRADEDRNAAILERI  208 (248)
T ss_pred             -------------cCCCCCchhHHHHHHHHHHHHHHHHHhC---ccCcEEEEEEECcCcCcchhccccChHHHHHHHhcC
Confidence                         4555667899999999999999999997   78999999999999999876432211 111122234


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      |.+++.+|+|+|+++++++... ...+|.++..++|..
T Consensus       209 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       209 PAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCCEe
Confidence            5678899999999999655432 256799988887743

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-36  Score=282.74  Aligned_cols=224  Identities=24%  Similarity=0.311  Sum_probs=191.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++.+|++|.++++++++++.+ 
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~-   80 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAAS-   80 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999999999988888764  45788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+.  .+..+.+.+.+++++++|+.+++++++.++|+|++++ .|+||++||..+.       
T Consensus        81 -----~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~-------  147 (330)
T PRK06139         81 -----FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGF-------  147 (330)
T ss_pred             -----hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhc-------
Confidence                 568899999999986  3456788999999999999999999999999998876 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~-~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                   .+.|....|++||+++.+|+++|+.|+.   . .+|+|++|+||+++|++.+.......    ....
T Consensus       148 -------------~~~p~~~~Y~asKaal~~~~~sL~~El~---~~~gI~V~~v~Pg~v~T~~~~~~~~~~~----~~~~  207 (330)
T PRK06139        148 -------------AAQPYAAAYSASKFGLRGFSEALRGELA---DHPDIHVCDVYPAFMDTPGFRHGANYTG----RRLT  207 (330)
T ss_pred             -------------CCCCCchhHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEEecCCccCccccccccccc----cccc
Confidence                         6677888999999999999999999997   4 58999999999999998754221100    0011


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCC
Q 017580          297 LLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      +...+.+|+++|+.+++++..+.
T Consensus       208 ~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        208 PPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCC
Confidence            12245799999999997765443

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-36  Score=278.46  Aligned_cols=227  Identities=22%  Similarity=0.332  Sum_probs=191.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +..+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++..   +.++..+++|++|+++++++++++
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999888887777632   456778889999999999999999


Q ss_pred             HHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|++|||||+.  .+..+.+.+++++++++|+.|++++++.++|.|.++.  |+||++||.++.    
T Consensus        80 ~~------~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~----  147 (296)
T PRK05872         80 VE------RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR--GYVLQVSSLAAF----  147 (296)
T ss_pred             HH------HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHhhc----
Confidence            88      568999999999986  3456788999999999999999999999999997754  899999999887    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-HHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-AFT  293 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~~~  293 (369)
                                      .+.+....|++||+++++|+++++.|+.   ..||+|++++||+++|++.+......... ...
T Consensus       148 ----------------~~~~~~~~Y~asKaal~~~~~~l~~e~~---~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~  208 (296)
T PRK05872        148 ----------------AAAPGMAAYCASKAGVEAFANALRLEVA---HHGVTVGSAYLSWIDTDLVRDADADLPAFRELR  208 (296)
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHHHHH---HHCcEEEEEecCcccchhhhhccccchhHHHHH
Confidence                            6677888999999999999999999998   78999999999999999976542221111 111


Q ss_pred             HH--HHhhCCCCHHHHHHHHHHHhcC
Q 017580          294 VL--KLLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       294 ~~--~~~~~~~~~~e~A~~v~~~~l~  317 (369)
                      ..  .++++..+|+|+|+.+++++..
T Consensus       209 ~~~~~p~~~~~~~~~va~~i~~~~~~  234 (296)
T PRK05872        209 ARLPWPLRRTTSVEKCAAAFVDGIER  234 (296)
T ss_pred             hhCCCcccCCCCHHHHHHHHHHHHhc
Confidence            11  2456778999999999976543

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-35  Score=270.52  Aligned_cols=241  Identities=24%  Similarity=0.259  Sum_probs=197.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++.+|+++++++++++++    
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH----
Confidence            3678999999999999999999999999999999999988888877776543 45788999999999999887653    


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                            .+++|++|||||+.  .+..+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||..+.       
T Consensus        79 ------~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~-------  144 (259)
T PRK06125         79 ------AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGE-------  144 (259)
T ss_pred             ------hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCcccc-------
Confidence                  36799999999986  3455789999999999999999999999999998765 5899999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---------HHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---------FLS  288 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~---------~~~  288 (369)
                                   .+.+.+..|++||+|+.+++++++.|+.   +.||+||+|+||+++|++......         ...
T Consensus       145 -------------~~~~~~~~y~ask~al~~~~~~la~e~~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~  208 (259)
T PRK06125        145 -------------NPDADYICGSAGNAALMAFTRALGGKSL---DDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESR  208 (259)
T ss_pred             -------------CCCCCchHhHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHH
Confidence                         5666778899999999999999999997   889999999999999997543210         111


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ........|++++.+|+|+|+.+++++... ...+|..+..++|....
T Consensus       209 ~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        209 WQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             HHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCeeec
Confidence            111122335678889999999999654322 25689999888886543

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-36  Score=274.39  Aligned_cols=228  Identities=19%  Similarity=0.246  Sum_probs=190.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|++++.++++++.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFR   79 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888777644  45788999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||+.  .+..+.+.+.+++++++|+.|++.+++.++|.|.+++..|+||++||.++.      
T Consensus        80 ------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~------  147 (275)
T PRK05876         80 ------LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL------  147 (275)
T ss_pred             ------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc------
Confidence                  678999999999985  345678899999999999999999999999999776445899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH--HH----
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS--LM----  290 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~--~~----  290 (369)
                                    .+.++...|++||+++.+|+++|+.|++   ..+|+|++|+||+++|++..+......  ..    
T Consensus       148 --------------~~~~~~~~Y~asK~a~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  210 (275)
T PRK05876        148 --------------VPNAGLGAYGVAKYGVVGLAETLAREVT---ADGIGVSVLCPMVVETNLVANSERIRGAACAQSST  210 (275)
T ss_pred             --------------cCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeCccccccccchhhhcCcccccccc
Confidence                          6777888999999999999999999997   789999999999999998654211000  00    


Q ss_pred             --HHHHHHHhhCCCCHHHHHHHHHHHhcC
Q 017580          291 --AFTVLKLLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       291 --~~~~~~~~~~~~~~~e~A~~v~~~~l~  317 (369)
                        ............+|+|+|+.++.++..
T Consensus       211 ~~~~~~~~~~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        211 TGSPGPLPLQDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             ccccccccccccCCCHHHHHHHHHHHHHc
Confidence              000001112357999999999977643

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=269.63  Aligned_cols=242  Identities=18%  Similarity=0.263  Sum_probs=202.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|++++.++..+++...  +.++..+++|++|+++++++++++.+ 
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   83 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEA-   83 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999998888877777554  45688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||..  .+..+.+.+.+++++++|+.+++++++.+.+.|.+++ .|+||++||..+.       
T Consensus        84 -----~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~-------  150 (255)
T PRK07523         84 -----EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSA-------  150 (255)
T ss_pred             -----hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhc-------
Confidence                 678999999999986  3445678999999999999999999999999998765 6899999998776       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~  296 (369)
                                   .+.++...|++||++++.++++++.|++   +.||+|++++||+++|++.+........ .......
T Consensus       151 -------------~~~~~~~~y~~sK~a~~~~~~~~a~e~~---~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~  214 (255)
T PRK07523        151 -------------LARPGIAPYTATKGAVGNLTKGMATDWA---KHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRT  214 (255)
T ss_pred             -------------cCCCCCccHHHHHHHHHHHHHHHHHHhh---HhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcC
Confidence                         5667788999999999999999999998   7899999999999999987543211111 1122234


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       215 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~  252 (255)
T PRK07523        215 PAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGGIT  252 (255)
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCee
Confidence            6678899999999999655432 245788888887754

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-35  Score=269.04  Aligned_cols=241  Identities=21%  Similarity=0.248  Sum_probs=199.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+.+|+++||||++|||+++|++|+++|++|++++|+.+..++..+++     +.++.++.+|++|++++.++++++.+ 
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVE-   76 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            366899999999999999999999999999999999988877766554     34688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||...  +..+.+.+++++++++|+.+++.+++++++.|.+++..++||++||..+.       
T Consensus        77 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-------  144 (257)
T PRK07067         77 -----RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR-------  144 (257)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC-------
Confidence                 5688999999999763  44567889999999999999999999999999776435899999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FL  287 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~~  287 (369)
                                   .+.++...|++||+++..++++++.|+.   +.||+|++++||+++|++.+....          ..
T Consensus       145 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  208 (257)
T PRK07067        145 -------------RGEALVSHYCATKAAVISYTQSAALALI---RHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGE  208 (257)
T ss_pred             -------------CCCCCCchhhhhHHHHHHHHHHHHHHhc---ccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHH
Confidence                         6667788999999999999999999998   789999999999999998653211          01


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  334 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~  334 (369)
                      .........|++++.+|+|+|+.+++++.... ..+|.-+..++|+.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        209 KKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            11111223356788999999999996654432 457888888887543

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-35  Score=267.42  Aligned_cols=243  Identities=21%  Similarity=0.250  Sum_probs=196.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ||+++||||++|||++++++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++++++++++++++.+    
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~----   74 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDE----   74 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH----
Confidence            589999999999999999999999999999999988888877777543  35788999999999999999999988    


Q ss_pred             cCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        .++++|++|||||..  .+..+.+.+.|++++++|+.++++++++++|.|.+.+..|+||++||..+.          
T Consensus        75 --~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~----------  142 (252)
T PRK07677         75 --KFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAW----------  142 (252)
T ss_pred             --HhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhc----------
Confidence              568899999999964  344577899999999999999999999999998765435899999999877          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccch-hHHHHHHHHHHHHh
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVP-SFLSLMAFTVLKLL  298 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~-~~~~~~-~~~~~~~~~~~~~~  298 (369)
                                .+.+....|++||+|+.+++++|+.|+..  ..||+|++|+||+++|+ +..... ............++
T Consensus       143 ----------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~--~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~  210 (252)
T PRK07677        143 ----------DAGPGVIHSAAAKAGVLAMTRTLAVEWGR--KYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL  210 (252)
T ss_pred             ----------cCCCCCcchHHHHHHHHHHHHHHHHHhCc--ccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC
Confidence                      55566778999999999999999999961  46999999999999954 332211 11111111122356


Q ss_pred             hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          299 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      +++.+|+|+|+.+.+++... ...+|..+..++|....
T Consensus       211 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~~~  248 (252)
T PRK07677        211 GRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQWLN  248 (252)
T ss_pred             CCCCCHHHHHHHHHHHcCccccccCCCEEEECCCeecC
Confidence            68899999999999765432 36789998888876543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-35  Score=269.10  Aligned_cols=240  Identities=28%  Similarity=0.343  Sum_probs=192.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||++|||+++|++|+++|++|++++++.+..   .+++...    ++.++.+|++|+++++++++++.+ 
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~-   75 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVEK-   75 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHHH-
Confidence            35789999999999999999999999999999887765422   2233221    478899999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+.  .+..+.+.+.+++++++|+.+++++++.++|.|++++ .|+||++||..+..      
T Consensus        76 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~------  143 (255)
T PRK06463         76 -----EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIG------  143 (255)
T ss_pred             -----HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCC------
Confidence                 668899999999986  3445678999999999999999999999999998665 68999999987751      


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----HHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----LSLMAFT  293 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~----~~~~~~~  293 (369)
                                   .+.++...|++||+|+++++++++.|+.   +.||+|++|+||+++|++.......    .......
T Consensus       144 -------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  207 (255)
T PRK06463        144 -------------TAAEGTTFYAITKAGIIILTRRLAFELG---KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFR  207 (255)
T ss_pred             -------------CCCCCccHhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHH
Confidence                         2335567899999999999999999997   7899999999999999987532111    0111122


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ...+++++.+|+|+|+.+++++... ...+|..+..++|+..+
T Consensus       208 ~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~~  250 (255)
T PRK06463        208 NKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADGGRIDN  250 (255)
T ss_pred             hCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCeeec
Confidence            2345677889999999999754332 25689999999888764

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.4e-35  Score=267.64  Aligned_cols=220  Identities=20%  Similarity=0.276  Sum_probs=184.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++++||||++|||+++|++|+ +|++|++++|++++++++.+++++.+ ...+.+++||++|+++++++++++.+     
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~-----   73 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQE-----   73 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHH-----
Confidence            479999999999999999999 59999999999999999988887653 33578999999999999999999988     


Q ss_pred             CCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                       .++++|++|||||+..+  ..+.+.+.+++++++|+.+++.+++.++|.|.+++..|+||++||.++.           
T Consensus        74 -~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----------  141 (246)
T PRK05599         74 -LAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGW-----------  141 (246)
T ss_pred             -hcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccc-----------
Confidence             66899999999998643  2345667788899999999999999999999765435899999999987           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                               .+.++...|++||+|+.+|+++|+.|++   +.+|+|++++||+++|++.......            ...
T Consensus       142 ---------~~~~~~~~Y~asKaa~~~~~~~la~el~---~~~I~v~~v~PG~v~T~~~~~~~~~------------~~~  197 (246)
T PRK05599        142 ---------RARRANYVYGSTKAGLDAFCQGLADSLH---GSHVRLIIARPGFVIGSMTTGMKPA------------PMS  197 (246)
T ss_pred             ---------cCCcCCcchhhHHHHHHHHHHHHHHHhc---CCCceEEEecCCcccchhhcCCCCC------------CCC
Confidence                     6667788999999999999999999997   7899999999999999986543211            113


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          302 QSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      .+|||+|+.+++++..+.. ++.++.
T Consensus       198 ~~pe~~a~~~~~~~~~~~~-~~~~~~  222 (246)
T PRK05599        198 VYPRDVAAAVVSAITSSKR-STTLWI  222 (246)
T ss_pred             CCHHHHHHHHHHHHhcCCC-CceEEe
Confidence            5999999999976655432 334443

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=268.47  Aligned_cols=240  Identities=23%  Similarity=0.258  Sum_probs=197.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||.++|++|+++|++|++++|+.+. .+..+++.    +.++..+++|+++++++.++++++.+ 
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~-   85 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVIS-   85 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh----CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            5789999999999999999999999999999999998753 22223321    34677999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||...  +..+.+.+++++++++|+.+++++++.+.|.|++++ .++||++||..+.       
T Consensus        86 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  152 (255)
T PRK06841         86 -----AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGV-------  152 (255)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhc-------
Confidence                 5678999999999863  344678899999999999999999999999998765 6899999998877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.+....|++||+++..++++++.|++   +.+|+|++|+||+++|++.+...............|
T Consensus       153 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  216 (255)
T PRK06841        153 -------------VALERHVAYCASKAGVVGMTKVLALEWG---PYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIP  216 (255)
T ss_pred             -------------cCCCCCchHHHHHHHHHHHHHHHHHHHH---hhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCC
Confidence                         6667788999999999999999999997   789999999999999998764321111112223345


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .+++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       217 ~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        217 AGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGYTI  254 (255)
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCccC
Confidence            678899999999999765432 3568999998888654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.9e-36  Score=297.23  Aligned_cols=238  Identities=21%  Similarity=0.251  Sum_probs=199.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ...||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++..+.+|++|+++++++++++.+ 
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-  339 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQA-  339 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHH-
Confidence            347899999999999999999999999999999999988877776554     34677899999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .++++|+||||||+.   .+..+.+.+.+++++++|+.+++++++.++|.|. .  .|+||++||.++.      
T Consensus       340 -----~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~--~g~iv~isS~~~~------  405 (520)
T PRK06484        340 -----RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS-Q--GGVIVNLGSIASL------  405 (520)
T ss_pred             -----HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc-c--CCEEEEECchhhc------
Confidence                 668999999999986   2445778999999999999999999999999993 2  4899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLSLMAFTV  294 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~  294 (369)
                                    .+.++...|++||+++++|+++|+.|+.   +.||+||+|+||+|+|++.+....  .........
T Consensus       406 --------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  468 (520)
T PRK06484        406 --------------LALPPRNAYCASKAAVTMLSRSLACEWA---PAGIRVNTVAPGYIETPAVLALKASGRADFDSIRR  468 (520)
T ss_pred             --------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEeCCccCchhhhhccccHHHHHHHHh
Confidence                          6778888999999999999999999998   789999999999999998764321  111112223


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ..|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       469 ~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~~~  509 (520)
T PRK06484        469 RIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGGWTA  509 (520)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCccC
Confidence            345678889999999999765432 3578999988888643

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-35  Score=266.99  Aligned_cols=241  Identities=23%  Similarity=0.239  Sum_probs=199.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +|+++||||++|||+++|++|+++|++|+++++ +.+..+.+.+++...  +.++.++.+|+++.++++++++++.+   
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~---   76 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQ---   76 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH---
Confidence            589999999999999999999999999988865 556666766666544  46789999999999999999999998   


Q ss_pred             ccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .++++|++|||||....  ..+.+.+++++++++|+.+++.+++++.+.|.+++..|+||++||..+.         
T Consensus        77 ---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~---------  144 (256)
T PRK12743         77 ---RLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH---------  144 (256)
T ss_pred             ---HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc---------
Confidence               66889999999998643  3467889999999999999999999999999765435899999998876         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+.++...|+++|+++.+++++++.++.   +.+|++++|+||+++|++.+...... ........+.+
T Consensus       145 -----------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~  209 (256)
T PRK12743        145 -----------TPLPGASAYTAAKHALGGLTKAMALELV---EHGILVNAVAPGAIATPMNGMDDSDV-KPDSRPGIPLG  209 (256)
T ss_pred             -----------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEeCCccCccccccChHH-HHHHHhcCCCC
Confidence                       6677788999999999999999999998   78999999999999999876432221 11122234566


Q ss_pred             CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          300 LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      +..+|+|+|+.+++++... ...+|.++..++|....
T Consensus       210 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  246 (256)
T PRK12743        210 RPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGFMLA  246 (256)
T ss_pred             CCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcccc
Confidence            7889999999999765332 25689999999887654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=5.1e-36  Score=273.06  Aligned_cols=237  Identities=22%  Similarity=0.213  Sum_probs=189.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+.    . +.++..+++|+++.+++.++++++.+  
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~--   75 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVA--   75 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHH--
Confidence            5689999999999999999999999999999999998766655432    1 34688999999999999999999888  


Q ss_pred             hccCCCCCccEEEecccccc---CCCCCCH----HhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          141 LDSDMHSSIQLLINNAGILA---TSSRLTP----EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~---~~~~~~~----~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                          .++++|++|||||+..   +..+.+.    +.|++++++|+.++++++++++|.|.+++  |+||+++|..+.   
T Consensus        76 ----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~~sS~~~~---  146 (262)
T TIGR03325        76 ----AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR--GSVIFTISNAGF---  146 (262)
T ss_pred             ----HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC--CCEEEEecccee---
Confidence                5688999999999752   2223332    57899999999999999999999997654  799999998877   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hH---
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SF---  286 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----~~---  286 (369)
                                       .+.++...|++||+|+++++++++.|++   +. |+||+|+||+++|+|.....    ..   
T Consensus       147 -----------------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~  205 (262)
T TIGR03325       147 -----------------YPNGGGPLYTAAKHAVVGLVKELAFELA---PY-VRVNGVAPGGMSSDLRGPKSLGMADKSIS  205 (262)
T ss_pred             -----------------cCCCCCchhHHHHHHHHHHHHHHHHhhc---cC-eEEEEEecCCCcCCCcccccccccccccc
Confidence                             5566778999999999999999999997   55 99999999999999864310    00   


Q ss_pred             --HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCccc
Q 017580          287 --LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTV  334 (369)
Q Consensus       287 --~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~--~~sG~~~~~~~g~~~  334 (369)
                        ..........|++|+.+|+|+|+.+++++....  ..+|+.+..++|...
T Consensus       206 ~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~  257 (262)
T TIGR03325       206 TVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMGV  257 (262)
T ss_pred             ccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCeee
Confidence              001111223578899999999999995443222  358888888877543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-35  Score=267.03  Aligned_cols=238  Identities=21%  Similarity=0.254  Sum_probs=190.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||++|||++++++|+++|++|++++|++ ..++..+++...  +.++.++.+|+++.+++.++++++.+ 
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   80 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVE-   80 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHH-
Confidence            46789999999999999999999999999999999985 344555555443  45688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .++++|++|||||..   .+..+.+.+++++.+++|+.+++++++.++|.|++++ .|+||++||..+.      
T Consensus        81 -----~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~------  148 (260)
T PRK12823         81 -----AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR------  148 (260)
T ss_pred             -----HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc------
Confidence                 568899999999964   3556788999999999999999999999999998765 5899999998754      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch------h----H
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP------S----F  286 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~------~----~  286 (369)
                                    .  +....|++||+|++.|+++++.|++   +.||+|++|+||+|+|++.+...      .    .
T Consensus       149 --------------~--~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  209 (260)
T PRK12823        149 --------------G--INRVPYSAAKGGVNALTASLAFEYA---EHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAW  209 (260)
T ss_pred             --------------C--CCCCccHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCccCCcchhhHHhhcccccccccc
Confidence                          1  1235799999999999999999998   78999999999999998632110      0    0


Q ss_pred             H-HH-HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          287 L-SL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       287 ~-~~-~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      . .. .......|++++.+|+|+|+++++++... ...+|+.+..++|+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        210 YQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            0 00 01112235677889999999999654332 24678888887765

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.8e-36  Score=274.96  Aligned_cols=243  Identities=12%  Similarity=0.119  Sum_probs=180.7

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhh--------cCCC-----cEEEEEecC
Q 017580           59 TGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR--------NKDA-----RLEAFQVDL  123 (369)
Q Consensus        59 ~~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~--------~~~~-----~v~~~~~Dl  123 (369)
                      .+++||+++||||+  +|||+++|+.|+++|++|++.++. +.++...+.....        ..+.     ++..+.+|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV-PIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc-chhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            35789999999995  999999999999999999998765 2122221111100        0011     111223344


Q ss_pred             CCh------------------HHHHHHHHHHHHHHhccCCCCCccEEEeccccc----cCCCCCCHHhHHHhhhhhhHHH
Q 017580          124 SSF------------------QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGA  181 (369)
Q Consensus       124 s~~------------------~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~  181 (369)
                      ++.                  ++++++++++.+      +++++|+||||||..    .+..+++.++|++++++|+.|+
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~------~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~  156 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKK------DFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSF  156 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHH------HcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHH
Confidence            333                  368999999988      679999999999864    3556889999999999999999


Q ss_pred             HHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchhh-hhhhhHHHHHHHHHHHHHHhCCC
Q 017580          182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR-IYEYSKLCLLIFSYELHRNLGLD  260 (369)
Q Consensus       182 ~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~SK~a~~~~~~~la~el~~~  260 (369)
                      ++++++++|.|++   .|+||++||..+.                    .+.+... .|++||+|+.+|+++|+.|++  
T Consensus       157 ~~l~~a~~p~m~~---~G~ii~iss~~~~--------------------~~~p~~~~~Y~asKaAl~~lt~~la~el~--  211 (299)
T PRK06300        157 VSLLSHFGPIMNP---GGSTISLTYLASM--------------------RAVPGYGGGMSSAKAALESDTKVLAWEAG--  211 (299)
T ss_pred             HHHHHHHHHHhhc---CCeEEEEeehhhc--------------------CcCCCccHHHHHHHHHHHHHHHHHHHHhC--
Confidence            9999999999975   3799999998887                    5555553 799999999999999999997  


Q ss_pred             CC-CCeEEEEecCCcccCCccccchhHHH-HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          261 KS-RHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       261 ~~-~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                       + .||+||+|+||+++|++......... ........|+++..+|+|+|+.++|++... ...+|+.+..++|...
T Consensus       212 -~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        212 -RRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             -CCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence             5 59999999999999998754321111 111122345678889999999999654332 3578988888877543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=2.4e-35  Score=261.59  Aligned_cols=218  Identities=27%  Similarity=0.381  Sum_probs=188.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|||||.|||++.|++||++|.+|++++|++++++.+++|+.+.++ .+++++.+|+++.+.+   .+++++.+ 
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~---ye~i~~~l-  122 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEV---YEKLLEKL-  122 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchh---HHHHHHHh-
Confidence            469999999999999999999999999999999999999999999999885 8999999999998874   34444444 


Q ss_pred             ccCCCCCccEEEeccccccCCC----CCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          142 DSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                         ...+|.+||||+|...+.+    +.+.+.++..++||..+...+++.++|.|.+++ .|-|||+||.++.       
T Consensus       123 ---~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~-------  191 (312)
T KOG1014|consen  123 ---AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGL-------  191 (312)
T ss_pred             ---cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEecccccc-------
Confidence               3468999999999875332    456668899999999999999999999999977 8999999999999       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.|.++.|++||+.+..|+++|+.|++   .+||.|.++.|++|.|+|........          
T Consensus       192 -------------~p~p~~s~ysasK~~v~~~S~~L~~Ey~---~~gI~Vq~v~p~~VaTkm~~~~~~sl----------  245 (312)
T KOG1014|consen  192 -------------IPTPLLSVYSASKAFVDFFSRCLQKEYE---SKGIFVQSVIPYLVATKMAKYRKPSL----------  245 (312)
T ss_pred             -------------ccChhHHHHHHHHHHHHHHHHHHHHHHH---hcCeEEEEeehhheeccccccCCCCC----------
Confidence                         8999999999999999999999999998   89999999999999999987643221          


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALAPPETSG  323 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~~~sG  323 (369)
                        ...+|+.-|+..++.+-.....+|
T Consensus       246 --~~ps~~tfaksal~tiG~~~~TtG  269 (312)
T KOG1014|consen  246 --FVPSPETFAKSALNTIGNASETTG  269 (312)
T ss_pred             --cCcCHHHHHHHHHhhcCCcccCCC
Confidence              346999999999976554444444

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.7e-36  Score=255.68  Aligned_cols=237  Identities=22%  Similarity=0.287  Sum_probs=198.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||.|++||+.||||++++++|+++|..+.++.-+.+. .+...++++.+|..++.+++||+++..++++.++++.. 
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~-   79 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA-   79 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999987777766665 45667788889999999999999999999999999999 


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           +++.||++||+||+..      ..+|++++++|+.|.+.-+...+|+|.++.  .+|-|||+||..|.       
T Consensus        80 -----~fg~iDIlINgAGi~~------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL-------  141 (261)
T KOG4169|consen   80 -----TFGTIDILINGAGILD------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL-------  141 (261)
T ss_pred             -----HhCceEEEEccccccc------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc-------
Confidence                 7799999999999953      577999999999999999999999998775  46899999999999       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH----HHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM----AFT  293 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~----~~~  293 (369)
                                   .|.|-.+.|++||+++.+|+|+|+...-. .+.||++++||||+++|.+.+++.....+.    ...
T Consensus       142 -------------~P~p~~pVY~AsKaGVvgFTRSla~~ayy-~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~  207 (261)
T KOG4169|consen  142 -------------DPMPVFPVYAASKAGVVGFTRSLADLAYY-QRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIK  207 (261)
T ss_pred             -------------CccccchhhhhcccceeeeehhhhhhhhH-hhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHH
Confidence                         88999999999999999999999977432 267999999999999999988763311111    111


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                      .....-.-.+|.++|+.+++++-.  ..+|..|..+.|+
T Consensus       208 ~~l~~~~~q~~~~~a~~~v~aiE~--~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  208 EALERAPKQSPACCAINIVNAIEY--PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHcccCCHHHHHHHHHHHHhh--ccCCcEEEEecCc
Confidence            111111246999999999987644  4578888888777

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=3.6e-35  Score=270.04  Aligned_cols=242  Identities=20%  Similarity=0.243  Sum_probs=194.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.   .+.++.++++|++|+++++++++.+.+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999877776666552   135789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                            .++++|+||||||...    +..+.+.+++++++++|+.|+++++++++|.|.+++ .|+||++||.++.    
T Consensus        91 ------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~----  159 (280)
T PLN02253         91 ------KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASA----  159 (280)
T ss_pred             ------HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhc----
Confidence                  5688999999999863    244678899999999999999999999999997765 6899999998876    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHH---HHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFL---SLM  290 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~~---~~~  290 (369)
                                      .+.++...|++||+|++++++++++|++   .++|+|++++||+++|++.... +...   ...
T Consensus       160 ----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~  220 (280)
T PLN02253        160 ----------------IGGLGPHAYTGSKHAVLGLTRSVAAELG---KHGIRVNCVSPYAVPTALALAHLPEDERTEDAL  220 (280)
T ss_pred             ----------------ccCCCCcccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcccccccccccccccchhhhh
Confidence                            5555667899999999999999999998   7899999999999999975432 1110   000


Q ss_pred             H-HHH----HHHh-hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          291 A-FTV----LKLL-GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       291 ~-~~~----~~~~-~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      . ...    ..++ ++..+|+|+|+++++++... ...+|+.+..++|..
T Consensus       221 ~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
T PLN02253        221 AGFRAFAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFT  270 (280)
T ss_pred             hhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchh
Confidence            0 000    0111 34579999999999654322 245788888887754

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=266.55  Aligned_cols=236  Identities=23%  Similarity=0.269  Sum_probs=194.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++      .  .  .+.++.++++|++++++++++++.+.+ 
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~--~~~~~~~~~~D~~~~~~~~~~~~~~~~-   71 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--V--DGRPAEFHAADVRDPDQVAALVDAIVE-   71 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--h--cCCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999998754      1  1  145688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.+.+.+++.+++|+.+++.+++.+.|.|.+++..|+||++||..+.       
T Consensus        72 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~-------  139 (252)
T PRK07856         72 -----RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR-------  139 (252)
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC-------
Confidence                 5689999999999763  34467889999999999999999999999999875435899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~  296 (369)
                                   .+.+....|++||++++.|+++++.|+.   +. |++++++||+++|++..... ............
T Consensus       140 -------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  202 (252)
T PRK07856        140 -------------RPSPGTAAYGAAKAGLLNLTRSLAVEWA---PK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATV  202 (252)
T ss_pred             -------------CCCCCCchhHHHHHHHHHHHHHHHHHhc---CC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcC
Confidence                         6677888999999999999999999997   55 99999999999999865421 111111122234


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      |++++.+|+|+|+.+++++... ...+|..+..++|....
T Consensus       203 ~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        203 PLGRLATPADIAWACLFLASDLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence            5678889999999999765432 35789999888887653

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=3.7e-35  Score=266.28  Aligned_cols=238  Identities=24%  Similarity=0.228  Sum_probs=192.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++++|+++.++++++++++.+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999877666554433     34688999999999999999999887


Q ss_pred             HHhccCCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                            .++++|++|||||+..    +..+.+.+++++.+++|+.+++.+++++.|.|.+..  |+||++||..+.    
T Consensus        81 ------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~ii~~sS~~~~----  148 (255)
T PRK05717         81 ------QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN--GAIVNLASTRAR----  148 (255)
T ss_pred             ------HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--cEEEEEcchhhc----
Confidence                  5688999999999863    234568899999999999999999999999997654  899999999887    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.+....|++||++++.+++++++++.    .+|+|++++||+++|++...............
T Consensus       149 ----------------~~~~~~~~Y~~sKaa~~~~~~~la~~~~----~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~  208 (255)
T PRK05717        149 ----------------QSEPDTEAYAASKGGLLALTHALAISLG----PEIRVNAVSPGWIDARDPSQRRAEPLSEADHA  208 (255)
T ss_pred             ----------------CCCCCCcchHHHHHHHHHHHHHHHHHhc----CCCEEEEEecccCcCCccccccchHHHHHHhh
Confidence                            5666778999999999999999999995    45999999999999998543211111111112


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ..+.+++.+|+|+|..+++++... ...+|+.+..++|..
T Consensus       209 ~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~  248 (255)
T PRK05717        209 QHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGMT  248 (255)
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCce
Confidence            345678889999999999654322 245688877776643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=3.5e-35  Score=260.58  Aligned_cols=190  Identities=30%  Similarity=0.435  Sum_probs=174.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+..+|.|+|||+.+|.|+.+|++|.++|++|++.+.+++..+....+..    ..+...+++|++++++|+++.+.+++
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999888887776664    46788999999999999999999999


Q ss_pred             HHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      .+++    .++..||||||+.   ++.+..+.++++++++||.+|++.+++.++|++++++  ||||+|||+.|.     
T Consensus       101 ~l~~----~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR-----  169 (322)
T KOG1610|consen  101 HLGE----DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGR-----  169 (322)
T ss_pred             hccc----ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccC-----
Confidence            8854    5599999999975   5666789999999999999999999999999999986  999999999998     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR  281 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~  281 (369)
                                     .+.|...+|++||+|++.|+.+|++|+.   +.||+|.++.||..+|++..
T Consensus       170 ---------------~~~p~~g~Y~~SK~aVeaf~D~lR~EL~---~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  170 ---------------VALPALGPYCVSKFAVEAFSDSLRRELR---PFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ---------------ccCcccccchhhHHHHHHHHHHHHHHHH---hcCcEEEEeccCccccccCC
Confidence                           7888999999999999999999999998   99999999999999999985

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.9e-35  Score=264.37  Aligned_cols=237  Identities=22%  Similarity=0.235  Sum_probs=190.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++|+++||||++|||+++|++|+++|++|+++++ +.+..+....++     +.++.++++|++++++++++++++.+ 
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATATE-   76 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            46799999999999999999999999999988765 444444443332     35788999999999999999999887 


Q ss_pred             HhccCCCCC-ccEEEeccccc--------cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          140 LLDSDMHSS-IQLLINNAGIL--------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       140 ~~~~~~~~~-id~lv~nAG~~--------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                           .+++ +|++|||||+.        .+..+.+.+.+++++++|+.+++.+++.++|.|..++ .|+||++||..+.
T Consensus        77 -----~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  150 (253)
T PRK08642         77 -----HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQ  150 (253)
T ss_pred             -----HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCcccc
Confidence                 4465 99999999974        2344678899999999999999999999999997665 5899999997665


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  290 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~  290 (369)
                                          .+..+...|++||+|++++++++++++.   +.+|+||+|+||+++|+............
T Consensus       151 --------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~i~pG~v~t~~~~~~~~~~~~~  207 (253)
T PRK08642        151 --------------------NPVVPYHDYTTAKAALLGLTRNLAAELG---PYGITVNMVSGGLLRTTDASAATPDEVFD  207 (253)
T ss_pred             --------------------CCCCCccchHHHHHHHHHHHHHHHHHhC---ccCeEEEEEeecccCCchhhccCCHHHHH
Confidence                                4555667899999999999999999998   78999999999999998654322111111


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ......|++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       208 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        208 LIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            2223346678899999999999766542 36789888888774

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.6e-36  Score=271.61  Aligned_cols=228  Identities=30%  Similarity=0.410  Sum_probs=194.9

Q ss_pred             CCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCCC-
Q 017580           70 GAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH-  146 (369)
Q Consensus        70 Gas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~~-  146 (369)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+..+ .+  ++++|++++++++++++++.+      .+ 
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~------~~~   71 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVE------RFG   71 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHH------HHC
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHh------hcC
Confidence            666  9999999999999999999999999988788888877654 33  599999999999999999999      55 


Q ss_pred             CCccEEEeccccccC------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          147 SSIQLLINNAGILAT------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       147 ~~id~lv~nAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                      +++|+||||+|...+      ..+.+.+.|++.+++|+.+++.+++++.|+|+++   |+||++||..+.          
T Consensus        72 g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---gsii~iss~~~~----------  138 (241)
T PF13561_consen   72 GRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG---GSIINISSIAAQ----------  138 (241)
T ss_dssp             SSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE---EEEEEEEEGGGT----------
T ss_pred             CCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CCcccccchhhc----------
Confidence            899999999997643      3456889999999999999999999999988774   799999999887          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHH-HHHHHHHHHHh
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVLKLL  298 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~-~~i~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~  298 (369)
                                .+.+....|+++|+|+++++++++.|++   + +|||||+|+||+++|++.+...... .........|+
T Consensus       139 ----------~~~~~~~~y~~sKaal~~l~r~lA~el~---~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl  205 (241)
T PF13561_consen  139 ----------RPMPGYSAYSASKAALEGLTRSLAKELA---PKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL  205 (241)
T ss_dssp             ----------SBSTTTHHHHHHHHHHHHHHHHHHHHHG---GHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT
T ss_pred             ----------ccCccchhhHHHHHHHHHHHHHHHHHhc---cccCeeeeeecccceeccchhccccccchhhhhhhhhcc
Confidence                      6778888999999999999999999998   7 8999999999999999976654322 23344556788


Q ss_pred             hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          299 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      +|+.+|+|+|+++++++... ...+|+.+.+|+|-
T Consensus       206 ~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  206 GRLGTPEEVANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             SSHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCeEEECCCc
Confidence            99899999999999544322 25789999999874

...

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-35  Score=267.80  Aligned_cols=250  Identities=16%  Similarity=0.181  Sum_probs=187.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++|||| ||||+++|++|+ +|++|++++|+.++++++.++++..  +.++.++++|++|++++.+++++++     
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~~-----   72 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATAQ-----   72 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHH-----
Confidence            589999998 699999999996 8999999999988888877777543  4578899999999999999999873     


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-------
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-------  215 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-------  215 (369)
                        .++++|++|||||+..     ..+.+++++++|+.|++++++.+.|.|+++   |++|++||.++......       
T Consensus        73 --~~g~id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---g~iv~isS~~~~~~~~~~~~~~~~  142 (275)
T PRK06940         73 --TLGPVTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAPG---GAGVVIASQSGHRLPALTAEQERA  142 (275)
T ss_pred             --hcCCCCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhhC---CCEEEEEecccccCcccchhhhcc
Confidence              4588999999999752     246789999999999999999999999653   68899999887632100       


Q ss_pred             --cCCCccccccccc-ccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhH--HHH
Q 017580          216 --QVNNETITGKFFL-RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSF--LSL  289 (369)
Q Consensus       216 --~~~~~~~~~~~~~-~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~--~~~  289 (369)
                        .++.++.....+. .....++...|++||+|+.++++++++|+.   +.||+||+|+||+++|++.... ...  ...
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~  219 (275)
T PRK06940        143 LATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG---ERGARINSISPGIISTPLAQDELNGPRGDGY  219 (275)
T ss_pred             ccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHc---cCCeEEEEeccCcCcCccchhhhcCCchHHH
Confidence              0000000000000 000013467899999999999999999997   7899999999999999986432 110  111


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      .......|++++.+|+|+|+.+++++.. ....+|+.+..++|...
T Consensus       220 ~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        220 RNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             HHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence            1122234678899999999999965432 23568998888888643

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=263.92  Aligned_cols=243  Identities=22%  Similarity=0.264  Sum_probs=195.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+ ..+..+++...  +.++.++.+|++++++++++++++.+ 
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~-   78 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKE-   78 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            367899999999999999999999999999999999874 34444444432  45788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||..  .+..+.+.+.+++.+++|+.+++.+++.++|.|++.+ .++||++||..+..      
T Consensus        79 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~------  146 (263)
T PRK08226         79 -----KEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDM------  146 (263)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc------
Confidence                 668899999999975  3445678899999999999999999999999987665 58999999977630      


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH------H-HHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF------L-SLM  290 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~------~-~~~  290 (369)
                                   .+.++...|++||+++++++++++.++.   +.+|+|++|+||+++|++.+.....      . ...
T Consensus       147 -------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  210 (263)
T PRK08226        147 -------------VADPGETAYALTKAAIVGLTKSLAVEYA---QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLT  210 (263)
T ss_pred             -------------cCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHH
Confidence                         3445677899999999999999999997   7899999999999999987653210      0 111


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      ......|++++.+|+|+|+.+++++.. +...+|+.+..++|...
T Consensus       211 ~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        211 EMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             HHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCccc
Confidence            112223566788999999999965532 23678999988888543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=262.60  Aligned_cols=243  Identities=21%  Similarity=0.274  Sum_probs=203.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++++.  +.++.++.+|+++++++.++++++.+
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988888887777654  44688999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.|.+++ .++||++||..+.      
T Consensus        85 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~------  151 (256)
T PRK06124         85 ------EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQ------  151 (256)
T ss_pred             ------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhc------
Confidence                  6689999999999863  345678899999999999999999999999998765 6899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~  295 (369)
                                    .+.++..+|++||+++..+++.++.|+.   ..+|++++|+||+++|++.+....... .......
T Consensus       152 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~  214 (256)
T PRK06124        152 --------------VARAGDAVYPAAKQGLTGLMRALAAEFG---PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR  214 (256)
T ss_pred             --------------cCCCCccHhHHHHHHHHHHHHHHHHHHH---HhCcEEEEEEECCccCcchhhhccChHHHHHHHhc
Confidence                          6677788999999999999999999997   789999999999999998654311111 1112222


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .+.+++.+|+|+|+++++++... ...+|.++..++|..
T Consensus       215 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        215 TPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             CCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCcc
Confidence            35667889999999999755432 256799988887754

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-35  Score=258.99  Aligned_cols=186  Identities=20%  Similarity=0.206  Sum_probs=164.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++..+.+|++++++++++++++.+ 
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQ-   78 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999999999888888664  35678899999999999999999988 


Q ss_pred             HhccCCCC-CccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          140 LLDSDMHS-SIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       140 ~~~~~~~~-~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                           +++ ++|++|||||..   .+..+.+.+++.+.+++|+.+++.+++.++|+|++++++|+||++||..+.     
T Consensus        79 -----~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----  148 (227)
T PRK08862         79 -----QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-----  148 (227)
T ss_pred             -----HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-----
Confidence                 556 899999999854   244567889999999999999999999999999875436899999996543     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                                        ++...|++||+|+.+|+++|+.|++   +++|+||+|+||+++|+.
T Consensus       149 ------------------~~~~~Y~asKaal~~~~~~la~el~---~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        149 ------------------QDLTGVESSNALVSGFTHSWAKELT---PFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             ------------------CCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCcCcCCC
Confidence                              3456899999999999999999998   889999999999999994

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=262.87  Aligned_cols=234  Identities=22%  Similarity=0.247  Sum_probs=190.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||++++++|+++|++|++++|+++..           ...++.++++|++|+++++++++++.+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------LPEGVEFVAADLTTAEGCAAVARAVLE   73 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------cCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999986431           134678999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccc----cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                            .++++|++|||||..    .+..+.+.+.+++++++|+.+++.+++.++|.|++++ .|+||++||..+.    
T Consensus        74 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~----  142 (260)
T PRK06523         74 ------RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRR----  142 (260)
T ss_pred             ------HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeccccc----
Confidence                  668999999999964    2344678899999999999999999999999998765 6899999998876    


Q ss_pred             ccCCCcccccccccccCCCc-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-------
Q 017580          215 AQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-------  286 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-------  286 (369)
                                      .+.+ ....|++||++++.++++++.++.   +.||++++|+||+|+|++.......       
T Consensus       143 ----------------~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~  203 (260)
T PRK06523        143 ----------------LPLPESTTAYAAAKAALSTYSKSLSKEVA---PKGVRVNTVSPGWIETEAAVALAERLAEAAGT  203 (260)
T ss_pred             ----------------CCCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCcccCccHHHHHHHHHhhcCC
Confidence                            4433 678899999999999999999997   7899999999999999986542110       


Q ss_pred             --HHHHHH----HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          287 --LSLMAF----TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       287 --~~~~~~----~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                        ......    ....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       204 ~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~  257 (260)
T PRK06523        204 DYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTV  257 (260)
T ss_pred             CHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCcc
Confidence              000000    11136677889999999999765432 356788888887754

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=261.68  Aligned_cols=244  Identities=24%  Similarity=0.313  Sum_probs=201.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.++++++..++...  ..++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888887776544  3468899999999999999999988


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC-------CCeEEEEcCCc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-------PSRIVNVTSFT  208 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-------~g~IV~vsS~~  208 (369)
                      +      .++++|++|||||...  +..+.+.+.++.++++|+.+++.++++++|.|.++..       .++||++||..
T Consensus        82 ~------~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  155 (258)
T PRK06949         82 T------EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVA  155 (258)
T ss_pred             H------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccc
Confidence            7      6689999999999753  3446678899999999999999999999999876531       47999999988


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  288 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~  288 (369)
                      +.                    .+.+....|++||+++..++++++.++.   +.+|+|++|+||+|+|++.+.......
T Consensus       156 ~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~  212 (258)
T PRK06949        156 GL--------------------RVLPQIGLYCMSKAAVVHMTRAMALEWG---RHGINVNAICPGYIDTEINHHHWETEQ  212 (258)
T ss_pred             cc--------------------CCCCCccHHHHHHHHHHHHHHHHHHHHH---hcCeEEEEEeeCCCcCCcchhccChHH
Confidence            76                    5566778999999999999999999997   789999999999999999765322221


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  332 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~  332 (369)
                      ........+.+++.+|+|+|+.+.+++.. +...+|..+..++|.
T Consensus       213 ~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        213 GQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence            12223334567889999999999965542 236789998877763

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=272.84  Aligned_cols=225  Identities=26%  Similarity=0.302  Sum_probs=191.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~-   81 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEE-   81 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999999888888888654  45788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+.  .+..+.+.+++++.+++|+.+++++++.++|.|++++ .|+||++||..+.       
T Consensus        82 -----~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~-------  148 (334)
T PRK07109         82 -----ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAY-------  148 (334)
T ss_pred             -----HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhc-------
Confidence                 678999999999975  3456789999999999999999999999999998875 6899999999987       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.+....|++||+++.+|+++++.|+..+ ..+|++++|+||.++|++........    .....+
T Consensus       149 -------------~~~~~~~~Y~asK~a~~~~~~~l~~el~~~-~~~I~v~~v~Pg~v~T~~~~~~~~~~----~~~~~~  210 (334)
T PRK07109        149 -------------RSIPLQSAYCAAKHAIRGFTDSLRCELLHD-GSPVSVTMVQPPAVNTPQFDWARSRL----PVEPQP  210 (334)
T ss_pred             -------------cCCCcchHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEEeCCCccCchhhhhhhhc----cccccC
Confidence                         666778899999999999999999998621 35799999999999999865321110    001123


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC
Q 017580          298 LGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      ..++.+|+|+|+.+++++..+
T Consensus       211 ~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        211 VPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             CCCCCCHHHHHHHHHHHHhCC
Confidence            345679999999999876544

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=264.76  Aligned_cols=228  Identities=18%  Similarity=0.274  Sum_probs=189.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch-------HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-------LSETMADITSRNKDARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~  132 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|+++++++.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHH
Confidence            4678999999999999999999999999999999998653       34455555443  45789999999999999999


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                      ++++.+      .++++|++|||||..  .+..+.+.+++++++++|+.+++.++++++|.|++++ .|+||++||..+.
T Consensus        81 ~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  153 (273)
T PRK08278         81 VAKAVE------RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNL  153 (273)
T ss_pred             HHHHHH------HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhc
Confidence            999888      557899999999975  3445678899999999999999999999999998775 6899999998765


Q ss_pred             ccccccCCCcccccccccccCCC--chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC-cccCCccccchhHH
Q 017580          211 NVFNAQVNNETITGKFFLRSKCY--PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFL  287 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG-~v~T~~~~~~~~~~  287 (369)
                                          .+.  ++...|++||++++.++++++.|+.   +++|+|++|+|| +++|++.+..... 
T Consensus       154 --------------------~~~~~~~~~~Y~~sK~a~~~~~~~la~el~---~~~I~v~~i~Pg~~i~t~~~~~~~~~-  209 (273)
T PRK08278        154 --------------------DPKWFAPHTAYTMAKYGMSLCTLGLAEEFR---DDGIAVNALWPRTTIATAAVRNLLGG-  209 (273)
T ss_pred             --------------------cccccCCcchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeCCCccccHHHHhcccc-
Confidence                                333  6778999999999999999999998   789999999999 6899876543221 


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEe
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFF  327 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~  327 (369)
                             ..++++..+|+++|+.+++++.... ..+|+++.
T Consensus       210 -------~~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~  243 (273)
T PRK08278        210 -------DEAMRRSRTPEIMADAAYEILSRPAREFTGNFLI  243 (273)
T ss_pred             -------cccccccCCHHHHHHHHHHHhcCccccceeEEEe
Confidence                   1133467899999999997665443 56888886

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=2.6e-34  Score=257.67  Aligned_cols=230  Identities=20%  Similarity=0.211  Sum_probs=187.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||++|||+++|++|+++|++|++++|+++...   +++...    .+.++.+|++++++++++++++.+    
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~----   70 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQ----   70 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHh----
Confidence            579999999999999999999999999999999876432   333222    257899999999999999999988    


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCcccccccccCCC
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                        .++++|++|||||+..  ...+.+.+++++++++|+.+++.+++.++|.|++++ +.|+||++||..+.         
T Consensus        71 --~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~---------  139 (236)
T PRK06483         71 --HTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE---------  139 (236)
T ss_pred             --hCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc---------
Confidence              6688999999999753  234567899999999999999999999999997653 14799999998876         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+.++...|++||++++++++++++|++   + +|+||+|+||++.|+....  ... ........+++
T Consensus       140 -----------~~~~~~~~Y~asKaal~~l~~~~a~e~~---~-~irvn~v~Pg~~~~~~~~~--~~~-~~~~~~~~~~~  201 (236)
T PRK06483        140 -----------KGSDKHIAYAASKAALDNMTLSFAAKLA---P-EVKVNSIAPALILFNEGDD--AAY-RQKALAKSLLK  201 (236)
T ss_pred             -----------cCCCCCccHHHHHHHHHHHHHHHHHHHC---C-CcEEEEEccCceecCCCCC--HHH-HHHHhccCccc
Confidence                       5667788999999999999999999996   4 5999999999998864321  111 11122234667


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017580          300 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  333 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~  333 (369)
                      +..+|+|+|+.+.+++. ....+|+.+..++|..
T Consensus       202 ~~~~~~~va~~~~~l~~-~~~~~G~~i~vdgg~~  234 (236)
T PRK06483        202 IEPGEEEIIDLVDYLLT-SCYVTGRSLPVDGGRH  234 (236)
T ss_pred             cCCCHHHHHHHHHHHhc-CCCcCCcEEEeCcccc
Confidence            78899999999998764 4567899988888754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-34  Score=260.66  Aligned_cols=241  Identities=20%  Similarity=0.288  Sum_probs=199.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEE-EeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +.+++++||||++|||++++++|+++|++|++ .+|+.++.+++.++++..  +.++.++.+|++|++++.++++++.+ 
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDE-   78 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            35789999999999999999999999999876 588888887777777654  45788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||..  .+..+.+.+.++.++++|+.+++.++++++|.|++++ .|+||++||..+.       
T Consensus        79 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~-------  145 (250)
T PRK08063         79 -----EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSI-------  145 (250)
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhc-------
Confidence                 668899999999975  3556778899999999999999999999999998776 6899999998776       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-HHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-AFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~  296 (369)
                                   .+.++...|++||++++.++++++.++.   +.+|++++|+||+++|++....+...... ......
T Consensus       146 -------------~~~~~~~~y~~sK~a~~~~~~~~~~~~~---~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  209 (250)
T PRK08063        146 -------------RYLENYTTVGVSKAALEALTRYLAVELA---PKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKT  209 (250)
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHHh---HhCeEEEeEecCcccCchhhhccCchHHHHHHhcCC
Confidence                         5566778999999999999999999997   78999999999999999876543322111 111122


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~  333 (369)
                      +.+++.+++|+|+.+++++.... ..+|+.+..++|..
T Consensus       210 ~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        210 PAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence            44567899999999997665433 45789988887764

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=3.6e-34  Score=259.46  Aligned_cols=238  Identities=22%  Similarity=0.312  Sum_probs=199.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||+||||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|++++.++++++.+     
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~-----   73 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAE-----   73 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH-----
Confidence            58999999999999999999999999999999988887777777543  45789999999999999999999988     


Q ss_pred             CCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                       .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++.|++.+..++||++||..+.           
T Consensus        74 -~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-----------  141 (254)
T TIGR02415        74 -KFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGH-----------  141 (254)
T ss_pred             -HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhc-----------
Confidence             5688999999999863  44577899999999999999999999999999886545899999998887           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH----------HHHH
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL----------SLMA  291 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~----------~~~~  291 (369)
                               .+.+....|++||++++.+++.++.|+.   +.+|+|++++||+++|++.+......          ....
T Consensus       142 ---------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~  209 (254)
T TIGR02415       142 ---------EGNPILSAYSSTKFAVRGLTQTAAQELA---PKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEE  209 (254)
T ss_pred             ---------CCCCCCcchHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHH
Confidence                     6677888999999999999999999997   77999999999999999865532211          0111


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      .....+.+++.+|+|+|+++.+++.... ..+|.++..++|.
T Consensus       210 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       210 FSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGGM  251 (254)
T ss_pred             HHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCCc
Confidence            2223456778999999999996655433 5689999888764

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-34  Score=259.74  Aligned_cols=242  Identities=19%  Similarity=0.220  Sum_probs=197.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||++|||.++|++|+++|++|++++|+.+..++..+++....+..+++++.+|+++.+++.++++++.+    
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~----   77 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDE----   77 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHH----
Confidence            6899999999999999999999999999999999888888777776654335789999999999999999999988    


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        .++++|++|||||...  +..+.+.+.+++.+++|+.++++++++++|.|.+++..++||++||..+.          
T Consensus        78 --~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~----------  145 (259)
T PRK12384         78 --IFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK----------  145 (259)
T ss_pred             --HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc----------
Confidence              6689999999999763  34567889999999999999999999999999765424799999998776          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchhH----------HHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSF----------LSL  289 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v-~T~~~~~~~~~----------~~~  289 (369)
                                .+.+....|++||+|+++++++++.|++   +.||+|++++||.+ .|++.......          ...
T Consensus       146 ----------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (259)
T PRK12384        146 ----------VGSKHNSGYSAAKFGGVGLTQSLALDLA---EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVE  212 (259)
T ss_pred             ----------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHH
Confidence                      5556677899999999999999999998   78999999999975 77765432111          111


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .......+++++.+|+|+++.+++++... ...+|+.+..++|+.
T Consensus       213 ~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        213 QYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             HHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence            11222346778899999999999665432 235788888887764

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-34  Score=260.49  Aligned_cols=239  Identities=27%  Similarity=0.271  Sum_probs=194.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.. +..+++.+.  +.++.++.+|+++++++.++++++.+ 
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   79 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVA-   79 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            57899999999999999999999999999999999998776 566666554  45689999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccccCC-CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                           .++++|++|||||..... .+.+.+++++.+++|+.+++.+++.++|.|++..  ++||++||..+.        
T Consensus        80 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~iv~~ss~~~~--------  144 (258)
T PRK08628         80 -----KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASR--GAIVNISSKTAL--------  144 (258)
T ss_pred             -----hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccC--cEEEEECCHHhc--------
Confidence                 668999999999975322 2334489999999999999999999999987654  899999998887        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hHHHHH-HHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SFLSLM-AFT  293 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----~~~~~~-~~~  293 (369)
                                  .+.++...|++||+++++++++++.|+.   +++|+|++|+||.++|++.+...    ...... ...
T Consensus       145 ------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  209 (258)
T PRK08628        145 ------------TGQGGTSGYAAAKGAQLALTREWAVALA---KDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAIT  209 (258)
T ss_pred             ------------cCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHH
Confidence                        5667788999999999999999999997   78999999999999999865321    111111 111


Q ss_pred             HHHHhh-CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          294 VLKLLG-LLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       294 ~~~~~~-~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      ...+.+ ++.+|+|+|+.+++++.... ..+|.++..++|.
T Consensus       210 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        210 AKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             hcCCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCc
Confidence            112332 67899999999997665442 5678888887764

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-34  Score=258.10  Aligned_cols=240  Identities=26%  Similarity=0.286  Sum_probs=196.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+.+.+++...  ..++..+.+|+++.++++++++++.+ 
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   79 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS-   79 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999988777777776543  34678899999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc-----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                           ..+++|++|||||+..     +..+.+.+.+++++++|+.+++.++++++|.|.+.+ .|+||++||..+.    
T Consensus        80 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~----  149 (250)
T PRK07774         80 -----AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAW----  149 (250)
T ss_pred             -----HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEeccccc----
Confidence                 5578999999999863     234567899999999999999999999999998765 6899999998765    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                         .+.+.|++||++++.+++++++++.   ..+|++++++||.++|++.+.............
T Consensus       150 -------------------~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~  207 (250)
T PRK07774        150 -------------------LYSNFYGLAKVGLNGLTQQLARELG---GMNIRVNAIAPGPIDTEATRTVTPKEFVADMVK  207 (250)
T ss_pred             -------------------CCccccHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecCcccCccccccCCHHHHHHHHh
Confidence                               2345799999999999999999997   789999999999999999765433221111222


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  334 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~  334 (369)
                      ..+..+..+|+|+|+.+++++.... ..+|++|..++|..+
T Consensus       208 ~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        208 GIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            2234456799999999996654432 457888888887654

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-34  Score=257.55  Aligned_cols=243  Identities=29%  Similarity=0.328  Sum_probs=203.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||+||||+++|++|+++|++|++++|+++++++..++++..  +.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999998888887777654  45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||...  +..+.+.+.+++++++|+.+++.+++.+.|.|.+++ .|++|++||..+.      
T Consensus        81 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------  147 (250)
T PRK12939         81 ------ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTAL------  147 (250)
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhc------
Confidence                  5688999999999863  345678899999999999999999999999998765 6899999998876      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.+....|++||++++.+++.++.+++   ..+|++++|+||+++|++.+...............
T Consensus       148 --------------~~~~~~~~y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~  210 (250)
T PRK12939        148 --------------WGAPKLGAYVASKGAVIGMTRSLARELG---GRGITVNAIAPGLTATEATAYVPADERHAYYLKGR  210 (250)
T ss_pred             --------------cCCCCcchHHHHHHHHHHHHHHHHHHHh---hhCEEEEEEEECCCCCccccccCChHHHHHHHhcC
Confidence                          5666778899999999999999999997   78999999999999999987643311111122233


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      +.+++.+|+|+|+.+++++... +..+|+++..++|..
T Consensus       211 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        211 ALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            5567889999999999766443 256899988887753

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.1e-34  Score=259.39  Aligned_cols=247  Identities=15%  Similarity=0.158  Sum_probs=194.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|++++++++.+++....+...+.++++|++|++++.++++++.+  
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~--   79 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE--   79 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH--
Confidence            468999999999999999999999999999999999998888888886554445677889999999999999999987  


Q ss_pred             hccCCCCCccEEEecccccc-----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          141 LDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                          .++++|++|||||...     +..+.+.+.+++.+++|+.+++.++++++|.|++++ .++||++||..+......
T Consensus        80 ----~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~  154 (256)
T PRK09186         80 ----KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKF  154 (256)
T ss_pred             ----HcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccc
Confidence                5688999999998642     345678899999999999999999999999998775 689999999877632111


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                      ..    .      ...+......|++||++++++++++++|+.   +.+|+|++++||.+.|+.......     .....
T Consensus       155 ~~----~------~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~~i~v~~i~Pg~~~~~~~~~~~~-----~~~~~  216 (256)
T PRK09186        155 EI----Y------EGTSMTSPVEYAAIKAGIIHLTKYLAKYFK---DSNIRVNCVSPGGILDNQPEAFLN-----AYKKC  216 (256)
T ss_pred             hh----c------cccccCCcchhHHHHHHHHHHHHHHHHHhC---cCCeEEEEEecccccCCCCHHHHH-----HHHhc
Confidence            00    0      001122234799999999999999999997   789999999999998765322111     11112


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .+..++.+|+|+|+.+++++... ...+|.++..++|.
T Consensus       217 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        217 CNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             CCccCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence            23456789999999999655433 25679998888774

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-34  Score=260.06  Aligned_cols=243  Identities=21%  Similarity=0.240  Sum_probs=199.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++++||||++|||++++++|+++|++|++++|+.++++++.+++...  +.++.++.+|+++++++.++++++.+ 
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   83 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVE-   83 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999988888877777543  45688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||...  +..+.+.+++++++++|+.+++.+++++.|.|.+....|+||++||..+.       
T Consensus        84 -----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~-------  151 (263)
T PRK07814         84 -----AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR-------  151 (263)
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc-------
Confidence                 5688999999999753  34467889999999999999999999999999874336899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~  296 (369)
                                   .+.++...|++||++++.++++++.|+.   + +|++++|+||+++|++.......... .......
T Consensus       152 -------------~~~~~~~~Y~~sK~a~~~~~~~~~~e~~---~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  214 (263)
T PRK07814        152 -------------LAGRGFAAYGTAKAALAHYTRLAALDLC---P-RIRVNAIAPGSILTSALEVVAANDELRAPMEKAT  214 (263)
T ss_pred             -------------CCCCCCchhHHHHHHHHHHHHHHHHHHC---C-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcC
Confidence                         5667788999999999999999999995   4 69999999999999986543211111 1111123


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ++.+..+|+|+|+.+++++... ...+|..+..++|...
T Consensus       215 ~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        215 PLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCccC
Confidence            4556789999999999765432 2567888877766544

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.7e-34  Score=258.07  Aligned_cols=240  Identities=26%  Similarity=0.328  Sum_probs=200.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++++||||+||||.+++++|+++|++|++++|+.++.++...++..   +.++.++.+|++++++++++++++.+  
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~--   77 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALE--   77 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH--
Confidence            5789999999999999999999999999999999999888777776644   45689999999999999999999877  


Q ss_pred             hccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          141 LDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                          .++++|++|||||...   +..+.+.+.+++.+++|+.+++.+++.+++.|++++ .++||++||..+.       
T Consensus        78 ----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  145 (251)
T PRK07231         78 ----RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGL-------  145 (251)
T ss_pred             ----HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhc-------
Confidence                5688999999999752   344678999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---HHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---LSLMAFTV  294 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~  294 (369)
                                   .+.++...|+.||+++..+++.++.+++   +.+|++++++||+++|++.......   ........
T Consensus       146 -------------~~~~~~~~y~~sk~~~~~~~~~~a~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~  209 (251)
T PRK07231        146 -------------RPRPGLGWYNASKGAVITLTKALAAELG---PDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLA  209 (251)
T ss_pred             -------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEECccCCCcchhhhcccChHHHHHHhc
Confidence                         6677888999999999999999999997   6799999999999999987654321   11111222


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ..+.+++.+|+|+|+++++++... ...+|.++..++|..
T Consensus       210 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~  249 (251)
T PRK07231        210 TIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGGRC  249 (251)
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCcc
Confidence            234567789999999999876543 256789888887754

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-34  Score=259.29  Aligned_cols=241  Identities=19%  Similarity=0.227  Sum_probs=197.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++.+ 
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~-   82 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIAD-   82 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999988877776666554  34678899999999999999999887 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||..  .+..+.+.+.+++++++|+.+++.++++++|.|++++  |+||++||..+.       
T Consensus        83 -----~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~--g~iv~iss~~~~-------  148 (264)
T PRK07576         83 -----EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG--ASIIQISAPQAF-------  148 (264)
T ss_pred             -----HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CEEEEECChhhc-------
Confidence                 568899999999865  3345678899999999999999999999999997653  899999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc-CCccccc-hhHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK-TNIMREV-PSFLSLMAFTVL  295 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~-T~~~~~~-~~~~~~~~~~~~  295 (369)
                                   .+.+....|++||++++.|+++++.|+.   ..+|+|++|+||+++ |+..... +...........
T Consensus       149 -------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~  212 (264)
T PRK07576        149 -------------VPMPMQAHVCAAKAGVDMLTRTLALEWG---PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS  212 (264)
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc
Confidence                         5667788999999999999999999997   789999999999997 6643332 111111111122


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .|+++..+|+|+|+.+++++... ...+|.++..++|..
T Consensus       213 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~~  251 (264)
T PRK07576        213 VPLKRNGTKQDIANAALFLASDMASYITGVVLPVDGGWS  251 (264)
T ss_pred             CCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCcc
Confidence            35667889999999999765432 256899988887754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-34  Score=262.42  Aligned_cols=230  Identities=23%  Similarity=0.265  Sum_probs=189.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+           ..++.++.+|++++++++++++++.+ 
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~-   73 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIE-   73 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999876431           23678899999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccccC-----------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          140 LLDSDMHSSIQLLINNAGILAT-----------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~-----------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                           .++++|++|||||+..+           ..+.+.+++++++++|+.+++++++++.|+|++++ .|+||++||..
T Consensus        74 -----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~  147 (266)
T PRK06171         74 -----KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEA  147 (266)
T ss_pred             -----HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEcccc
Confidence                 67899999999997532           23568899999999999999999999999998765 68999999998


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc-CCccccchh--
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK-TNIMREVPS--  285 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~-T~~~~~~~~--  285 (369)
                      +.                    .+.++...|++||++++.++++++.|++   +.||+||+|+||+++ |++......  
T Consensus       148 ~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~gi~v~~v~pG~~~~t~~~~~~~~~~  204 (266)
T PRK06171        148 GL--------------------EGSEGQSCYAATKAALNSFTRSWAKELG---KHNIRVVGVAPGILEATGLRTPEYEEA  204 (266)
T ss_pred             cc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeccccccCCCcChhhhhh
Confidence            87                    5667788999999999999999999998   789999999999997 666432110  


Q ss_pred             --------HHHH-HHHHH--HHHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017580          286 --------FLSL-MAFTV--LKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  332 (369)
Q Consensus       286 --------~~~~-~~~~~--~~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~~g~  332 (369)
                              .... .....  ..|++++.+|+|+|+++.+  +.++   ..+|+.+..++|.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~f--l~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        205 LAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCY--LLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             hccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheee--eeccccccceeeEEEecCcc
Confidence                    0111 11111  3577899999999999995  4443   4678888877764

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-34  Score=258.37  Aligned_cols=239  Identities=23%  Similarity=0.251  Sum_probs=196.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.+|+++||||++|||+++|++|+++|++|++++|+++.+++..+++...  +.++.++.+|++++++++++++++.+  
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--   78 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALE--   78 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHH--
Confidence            46899999999999999999999999999999999998888877777543  45689999999999999999999988  


Q ss_pred             hccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          141 LDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                          .++++|++|||||...   +..+.+.+++++++++|+.+++.+++++.|.|.+.+  ++||++||..+.       
T Consensus        79 ----~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~ii~~sS~~~~-------  145 (258)
T PRK07890         79 ----RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG--GSIVMINSMVLR-------  145 (258)
T ss_pred             ----HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CEEEEEechhhc-------
Confidence                5688999999999753   344678899999999999999999999999997764  799999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----------hHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----------SFL  287 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----------~~~  287 (369)
                                   .+.++...|++||++++.++++++.|++   ..+|++++++||++.|++.....          ...
T Consensus       146 -------------~~~~~~~~Y~~sK~a~~~l~~~~a~~~~---~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~  209 (258)
T PRK07890        146 -------------HSQPKYGAYKMAKGALLAASQSLATELG---PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQ  209 (258)
T ss_pred             -------------cCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHH
Confidence                         6667788999999999999999999997   78999999999999999754321          011


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .........+.+++.+|+|+|+++++++... ...+|+.+..++|.
T Consensus       210 ~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        210 IYAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            1111112235567789999999999554322 25678887767664

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=259.62  Aligned_cols=242  Identities=22%  Similarity=0.229  Sum_probs=197.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.++++|+++||||++|||.+++++|+++|++|++++|+.+ ..+...+.++..  +.++.++.+|+++.+++.++++++
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999864 344555555432  457889999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      .+      ..+++|++|||||...   +..+.+.+++++++++|+.+++.++++++|.|+.   .++||++||.++.   
T Consensus       119 ~~------~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~---  186 (290)
T PRK06701        119 VR------ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGY---  186 (290)
T ss_pred             HH------HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEeccccc---
Confidence            88      5678999999999753   3456788999999999999999999999999854   3799999999887   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       .+.+....|++||+|+..++++++.++.   +.||+|++|+||+++|++..............
T Consensus       187 -----------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~  246 (290)
T PRK06701        187 -----------------EGNETLIDYSATKGAIHAFTRSLAQSLV---QKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFG  246 (290)
T ss_pred             -----------------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCCCCCcccccccCHHHHHHHH
Confidence                             5556677899999999999999999997   78999999999999999875432211111122


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ...+++++.+|+|+|+++++++... ...+|..+..++|..
T Consensus       247 ~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~~  287 (290)
T PRK06701        247 SNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGVI  287 (290)
T ss_pred             hcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCcc
Confidence            2335677889999999999765543 356899988887743

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.8e-34  Score=284.80  Aligned_cols=238  Identities=25%  Similarity=0.305  Sum_probs=196.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+  
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~--   75 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHR--   75 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHH--
Confidence            36899999999999999999999999999999999988877766655     45678899999999999999999988  


Q ss_pred             hccCCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          141 LDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                          .++++|+||||||+..    +..+.+.+++++++++|+.+++.++++++|.|++++.+++||++||..+.      
T Consensus        76 ----~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~------  145 (520)
T PRK06484         76 ----EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL------  145 (520)
T ss_pred             ----HhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC------
Confidence                6689999999999842    34577899999999999999999999999999876523599999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH--HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS--LMAFTV  294 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~  294 (369)
                                    .+.+....|++||+++.+++++++.|+.   +.+|+|++|+||+|+|++.........  ......
T Consensus       146 --------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~  208 (520)
T PRK06484        146 --------------VALPKRTAYSASKAAVISLTRSLACEWA---AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRS  208 (520)
T ss_pred             --------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEccCCcCchhhhhhcccchhhhHHHHh
Confidence                          6677888999999999999999999997   789999999999999999764322111  111112


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ..+.+++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       209 ~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg~  247 (520)
T PRK06484        209 RIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVVDGGW  247 (520)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCccCceEEecCCe
Confidence            234566789999999999765543 25567777666553

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.2e-33  Score=254.93  Aligned_cols=239  Identities=22%  Similarity=0.278  Sum_probs=194.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++|+++||||++|||+++|++|+++|++|++. .++.+..++..+++...  +.++..+.+|++|.+++.++++++.+ 
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   77 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKA-   77 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            357999999999999999999999999998885 44555555555555433  45788899999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+.       
T Consensus        78 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~-------  144 (246)
T PRK12938         78 -----EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQ-------  144 (246)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhcc-------
Confidence                 5688999999999863  345678999999999999999999999999998765 6899999998877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||++++.+++++++|+.   ..+|++++|+||+++|++.+...... ........+
T Consensus       145 -------------~~~~~~~~y~~sK~a~~~~~~~l~~~~~---~~gi~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~  207 (246)
T PRK12938        145 -------------KGQFGQTNYSTAKAGIHGFTMSLAQEVA---TKGVTVNTVSPGYIGTDMVKAIRPDV-LEKIVATIP  207 (246)
T ss_pred             -------------CCCCCChhHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEecccCCchhhhcChHH-HHHHHhcCC
Confidence                         6667788999999999999999999997   78999999999999999876542211 111112234


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .+++.+|+++++.+++++... ...+|+.+..++|.
T Consensus       208 ~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        208 VRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL  243 (246)
T ss_pred             ccCCcCHHHHHHHHHHHcCcccCCccCcEEEECCcc
Confidence            567789999999999655432 35678888777653

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-34  Score=260.68  Aligned_cols=213  Identities=23%  Similarity=0.265  Sum_probs=184.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++++||||+||||++++++|+++|++|++++|++++++++.+++.      ++.++.+|++|++++.++++++.+ 
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~-   74 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEA-   74 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHH-
Confidence            3568999999999999999999999999999999999888777665542      577899999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.+.+.+++++++|+.|++.+++.++|.|.+++ .|+||++||.++.       
T Consensus        75 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  141 (273)
T PRK07825         75 -----DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGK-------  141 (273)
T ss_pred             -----HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCcccc-------
Confidence                 5688999999999863  345678899999999999999999999999998876 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||+++..|+++++.|+.   +.||++++|+||+++|++....+..          .
T Consensus       142 -------------~~~~~~~~Y~asKaa~~~~~~~l~~el~---~~gi~v~~v~Pg~v~t~~~~~~~~~----------~  195 (273)
T PRK07825        142 -------------IPVPGMATYCASKHAVVGFTDAARLELR---GTGVHVSVVLPSFVNTELIAGTGGA----------K  195 (273)
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHhh---ccCcEEEEEeCCcCcchhhcccccc----------c
Confidence                         6778888999999999999999999997   7899999999999999987654211          0


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC
Q 017580          298 LGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      .....+|+|+|+.++.++..+
T Consensus       196 ~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        196 GFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             CCCCCCHHHHHHHHHHHHhCC
Confidence            113579999999999776544

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.1e-33  Score=253.40  Aligned_cols=240  Identities=22%  Similarity=0.298  Sum_probs=195.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++||||+||||.++|++|+++|++|+++.+ +++..++..+++...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999987654 455666666666543  45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||...+  ..+.+.+.+++.+++|+.+++.+++.++|.|.+++ .++||++||..+.      
T Consensus        81 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~------  147 (247)
T PRK12935         81 ------HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQ------  147 (247)
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhc------
Confidence                  56889999999998643  34567899999999999999999999999998765 6899999998876      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||+++++++++++.++.   +.+|++++++||+++|++....+..... ......
T Consensus       148 --------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~  209 (247)
T PRK12935        148 --------------AGGFGQTNYSAAKAGMLGFTKSLALELA---KTNVTVNAICPGFIDTEMVAEVPEEVRQ-KIVAKI  209 (247)
T ss_pred             --------------CCCCCCcchHHHHHHHHHHHHHHHHHHH---HcCcEEEEEEeCCCcChhhhhccHHHHH-HHHHhC
Confidence                          5556778999999999999999999997   7899999999999999987665432221 112223


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                      +.+.+.+|+|+|+++++++..+...+|+-+..++|.
T Consensus       210 ~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        210 PKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence            345678999999999976543334677777777653

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=253.33  Aligned_cols=238  Identities=28%  Similarity=0.317  Sum_probs=193.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+. +..++..+++...  +.++.++.+|+++.+++.++++++.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET   79 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999998887764 3455566666543  46789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||+..  +..+.+.+.+++++++|+.+++.++++++|.|..   .++||++||.++.      
T Consensus        80 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~------  144 (245)
T PRK12937         80 ------AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIA------  144 (245)
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeecccc------
Confidence                  5688999999999863  3456788999999999999999999999999864   3799999998876      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||++++.++++++.++.   ..+|++++++||+++|++.................
T Consensus       145 --------------~~~~~~~~Y~~sK~a~~~~~~~~a~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~  207 (245)
T PRK12937        145 --------------LPLPGYGPYAASKAAVEGLVHVLANELR---GRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLA  207 (245)
T ss_pred             --------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcC
Confidence                          6667788999999999999999999997   78999999999999999864321111122222334


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017580          297 LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  331 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g  331 (369)
                      |+++..+|+|+|+.+++++.... ..+|.++..++|
T Consensus       208 ~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        208 PLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence            56678899999999996553322 457888877765

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=1.5e-33  Score=237.95  Aligned_cols=229  Identities=24%  Similarity=0.353  Sum_probs=183.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHC-CCE-EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           64 PVCIVTGATSGLGAAAAYALSRE-GFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~-G~~-Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |.++||||++|||+.++++|.+. |-+ ++.++|+++++.+..+...  -.+.+++++++|+++.+++.++++++.+..+
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~--~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKS--KSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhh--ccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            56999999999999999999976 444 5567788887522222211  1267999999999999999999999998553


Q ss_pred             ccCCCCCccEEEeccccccCC---CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC----------CCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----------VPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~----------~~g~IV~vsS~~  208 (369)
                          ..++|+||||||+..+.   .+.+.+.|-+++++|..|+.+++|+|+|++++..          ..+.|||+||..
T Consensus        82 ----~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~  157 (249)
T KOG1611|consen   82 ----SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA  157 (249)
T ss_pred             ----cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence                47899999999997443   3456788999999999999999999999998754          124799999987


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  288 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~  288 (369)
                      +-..                 .....++.+|.+||+|+++|+|+++.|++   +.+|-|..+|||||+|+|....     
T Consensus       158 ~s~~-----------------~~~~~~~~AYrmSKaAlN~f~ksls~dL~---~~~ilv~sihPGwV~TDMgg~~-----  212 (249)
T KOG1611|consen  158 GSIG-----------------GFRPGGLSAYRMSKAALNMFAKSLSVDLK---DDHILVVSIHPGWVQTDMGGKK-----  212 (249)
T ss_pred             cccC-----------------CCCCcchhhhHhhHHHHHHHHHHhhhhhc---CCcEEEEEecCCeEEcCCCCCC-----
Confidence            6522                 13445678999999999999999999998   8899999999999999998742     


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  335 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~~  335 (369)
                                 ...++||-+..++..+..-. ..+|.||. .++.+++
T Consensus       213 -----------a~ltveeSts~l~~~i~kL~~~hnG~ffn-~dlt~ip  248 (249)
T KOG1611|consen  213 -----------AALTVEESTSKLLASINKLKNEHNGGFFN-RDGTPIP  248 (249)
T ss_pred             -----------cccchhhhHHHHHHHHHhcCcccCcceEc-cCCCcCC
Confidence                       23599999999998877654 56788764 5566553

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.3e-33  Score=254.63  Aligned_cols=236  Identities=21%  Similarity=0.232  Sum_probs=190.5

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCc-----------chHHHHHHHHHhhcCCCcEEEEEecCCChH
Q 017580           61 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSS-----------HLLSETMADITSRNKDARLEAFQVDLSSFQ  127 (369)
Q Consensus        61 ~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~-----------~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~  127 (369)
                      +++|+++||||++  |||.++|++|+++|++|++++|++           +......+++...  +.+++++++|+++++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~   80 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCHH
Confidence            5789999999994  999999999999999999999972           2222233444322  457899999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017580          128 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  205 (369)
Q Consensus       128 ~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vs  205 (369)
                      ++.++++++.+      .++++|++|||||+.  .+..+.+.+++++.+++|+.+++.++++++|.|..+. .++||++|
T Consensus        81 ~~~~~~~~~~~------~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~s  153 (256)
T PRK12748         81 APNRVFYAVSE------RLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLT  153 (256)
T ss_pred             HHHHHHHHHHH------hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEEC
Confidence            99999999998      678999999999985  3445678899999999999999999999999997654 68999999


Q ss_pred             CCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017580          206 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  285 (369)
Q Consensus       206 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~  285 (369)
                      |..+.                    .+.++...|++||++++.++++++.|+.   ..+|+|++++||+++|++......
T Consensus       154 s~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~Pg~~~t~~~~~~~~  210 (256)
T PRK12748        154 SGQSL--------------------GPMPDELAYAATKGAIEAFTKSLAPELA---EKGITVNAVNPGPTDTGWITEELK  210 (256)
T ss_pred             Ccccc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHH---HhCeEEEEEEeCcccCCCCChhHH
Confidence            98876                    5666778999999999999999999997   789999999999999997543111


Q ss_pred             HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          286 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .    ......+..++.+|+|+|+.+++++... ...+|.++..++|.
T Consensus       211 ~----~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        211 H----HLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             H----hhhccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCCc
Confidence            0    1111223456789999999999765543 35679999887763

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.6e-33  Score=259.78  Aligned_cols=239  Identities=24%  Similarity=0.227  Sum_probs=192.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++||+++||||++|||+++|++|+++|++|++.+++. +..+++.++++..  +.++.++.+|+++.+++.++++++.
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999998854 4567777777654  4678899999999999999999887


Q ss_pred             HHHhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC------CCCeEEEEcCCcc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP------VPSRIVNVTSFTH  209 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~------~~g~IV~vsS~~~  209 (369)
                      +       ++++|++|||||+..+  ..+.+.+++++.+++|+.+++++++.+.|+|+++.      ..|+||++||.++
T Consensus        86 ~-------~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         86 G-------LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             H-------hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence            6       3789999999998643  35678899999999999999999999999987531      1379999999988


Q ss_pred             cccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH
Q 017580          210 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL  289 (369)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~  289 (369)
                      .                    .+.++...|++||++++.++++++.|+.   +.||+||+|+|| +.|+|..........
T Consensus       159 ~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn~i~Pg-~~t~~~~~~~~~~~~  214 (306)
T PRK07792        159 L--------------------VGPVGQANYGAAKAGITALTLSAARALG---RYGVRANAICPR-ARTAMTADVFGDAPD  214 (306)
T ss_pred             c--------------------cCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEECCC-CCCchhhhhccccch
Confidence            7                    5666778999999999999999999998   789999999999 488886542111000


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  334 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~  334 (369)
                      ..    .......+|+++|..+.+++.... ..+|+.+..++|...
T Consensus       215 ~~----~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        215 VE----AGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             hh----hhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEE
Confidence            00    011123589999999996654322 568999888877643

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-33  Score=253.21  Aligned_cols=240  Identities=25%  Similarity=0.277  Sum_probs=198.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||+||||.++|++|+++|++|++++|+.+..++..+++.   .+.++.++++|++|+++++++++++.+ 
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~-   77 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAA-   77 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            3678999999999999999999999999999999999887777776665   256789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ..+++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+.       
T Consensus        78 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~-------  144 (252)
T PRK06138         78 -----RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLAL-------  144 (252)
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhc-------
Confidence                 5688999999999863  334678899999999999999999999999998765 6899999998877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----HHHHH-HH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FLSLM-AF  292 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----~~~~~-~~  292 (369)
                                   .+.++...|+.||++++.++++++.|+.   ..+|++++++||++.|++..+...    ..... ..
T Consensus       145 -------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~  208 (252)
T PRK06138        145 -------------AGGRGRAAYVASKGAIASLTRAMALDHA---TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREAL  208 (252)
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---hcCeEEEEEEECCccCcchhhhhccccChHHHHHHH
Confidence                         5667778999999999999999999997   789999999999999998764321    11000 11


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      ....+..++.+++|+|+.+++++.... ..+|.++..++|.
T Consensus       209 ~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        209 RARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGGW  249 (252)
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence            112234457799999999997665543 5679988877664

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=252.98  Aligned_cols=236  Identities=26%  Similarity=0.362  Sum_probs=191.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|+++.+++.++++++.+ 
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAE-   76 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            356899999999999999999999999999999999987666655554     45788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||...  +..+.+.+.+++++++|+.+++.++++++|.|.+   .+++|+++|..+.       
T Consensus        77 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~-------  141 (249)
T PRK06500         77 -----AFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAH-------  141 (249)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhc-------
Confidence                 5688999999999763  3346788999999999999999999999999864   3789999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--h-HHH-H-HHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--S-FLS-L-MAF  292 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~--~-~~~-~-~~~  292 (369)
                                   .+.+....|++||+++++++++++.|+.   .++|++++++||.++|++.+...  . ... . ...
T Consensus       142 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~  205 (249)
T PRK06500        142 -------------IGMPNSSVYAASKAALLSLAKTLSGELL---PRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQI  205 (249)
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHH
Confidence                         5667788999999999999999999997   78999999999999999865321  1 001 1 111


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ....+++++.+|+|+|+++++++... ...+|..+..++|.
T Consensus       206 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~  246 (249)
T PRK06500        206 QALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGGM  246 (249)
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence            12235567789999999999765432 25567777777663

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.5e-33  Score=256.91  Aligned_cols=218  Identities=24%  Similarity=0.337  Sum_probs=179.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++|+++||||+||||++++++|+++|++|++++|+.+++++..    .    ..++++.+|++|+++++++++++.+   
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~----~~~~~~~~Dv~~~~~~~~~~~~~~~---   70 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S----LGVHPLSLDVTDEASIKAAVDTIIA---   70 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h----CCCeEEEeeCCCHHHHHHHHHHHHH---
Confidence            4789999999999999999999999999999999987655432    1    2478899999999999999999988   


Q ss_pred             ccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .++++|++|||||+..  +..+.+.+++++++++|+.+++.+++.++|.|++++ .|+||++||..+.         
T Consensus        71 ---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~---------  137 (273)
T PRK06182         71 ---EEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGK---------  137 (273)
T ss_pred             ---hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhc---------
Confidence               6689999999999863  455778999999999999999999999999998775 6899999998776         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---------HHHH-
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---------FLSL-  289 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~---------~~~~-  289 (369)
                                 .+.+....|++||+++++++++++.|++   +.||++++|+||+++|++.+....         .... 
T Consensus       138 -----------~~~~~~~~Y~~sKaa~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  203 (273)
T PRK06182        138 -----------IYTPLGAWYHATKFALEGFSDALRLEVA---PFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQ  203 (273)
T ss_pred             -----------CCCCCccHhHHHHHHHHHHHHHHHHHhc---ccCCEEEEEecCCcccccchhhhhhhcccccccchHHH
Confidence                       4456667899999999999999999997   789999999999999998532110         0000 


Q ss_pred             -----HHHHHHHHhhCCCCHHHHHHHHHHHhcC
Q 017580          290 -----MAFTVLKLLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       290 -----~~~~~~~~~~~~~~~~e~A~~v~~~~l~  317 (369)
                           .......+.+++.+|+++|+.+++++..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        204 AQAVAASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             HHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence                 0111222456778999999999976543

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-33  Score=284.40  Aligned_cols=229  Identities=25%  Similarity=0.269  Sum_probs=192.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ..+++++++||||+||||+++|++|+++|++|++++|+.++++++.++++..  +.++.++.+|++|++++.++++++.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999888888888655  34789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||+..  +..+.+.+++++++++|+.|++.++++++|.|.+++..|+||++||.++.      
T Consensus       389 ------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------  456 (582)
T PRK05855        389 ------EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAY------  456 (582)
T ss_pred             ------hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc------
Confidence                  6789999999999863  44577899999999999999999999999999887545899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--H-----HHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--F-----LSL  289 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--~-----~~~  289 (369)
                                    .+.++...|++||+|+++++++|+.|++   +.||+|++|+||+|+|+|.+....  .     ...
T Consensus       457 --------------~~~~~~~~Y~~sKaa~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  519 (582)
T PRK05855        457 --------------APSRSLPAYATSKAAVLMLSECLRAELA---AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARR  519 (582)
T ss_pred             --------------cCCCCCcHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEeCCCcccchhccccCCcccchhhhH
Confidence                          6677888999999999999999999998   789999999999999998765321  0     000


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCC
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      .......+..+..+|+++|+.+++++...
T Consensus       520 ~~~~~~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        520 RGRADKLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             HhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence            01111112224469999999999887654

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2e-33  Score=252.36  Aligned_cols=232  Identities=19%  Similarity=0.223  Sum_probs=191.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      ++||||++|||+++|++|+++|++|++++|+ .+..++..+++++.  +.++.++++|+++.+++.++++++.+      
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~------   72 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIA------   72 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHH------
Confidence            5899999999999999999999999998865 45566666666554  45789999999999999999998887      


Q ss_pred             CCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHh-HhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          145 MHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~-~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                      .++++|++|||||+..  +..+.+.++++.++++|+.+++++++.++ |.+++++ .|+||++||.++.           
T Consensus        73 ~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~-----------  140 (239)
T TIGR01831        73 EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGV-----------  140 (239)
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhc-----------
Confidence            6688999999999863  33467889999999999999999999875 5554444 6899999999887           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                               .+.++...|++||+++.+++++++.|+.   ..||++++++||+++|++.++.+...  .......|++++
T Consensus       141 ---------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~  206 (239)
T TIGR01831       141 ---------MGNRGQVNYSAAKAGLIGATKALAVELA---KRKITVNCIAPGLIDTEMLAEVEHDL--DEALKTVPMNRM  206 (239)
T ss_pred             ---------cCCCCCcchHHHHHHHHHHHHHHHHHHh---HhCeEEEEEEEccCccccchhhhHHH--HHHHhcCCCCCC
Confidence                     6677788999999999999999999997   78999999999999999987654321  112233567788


Q ss_pred             CCHHHHHHHHHHHhcC-CCCCcccEEeCCCC
Q 017580          302 QSPEKGINSVLDAALA-PPETSGVYFFGGKG  331 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g  331 (369)
                      .+|+|+|+.+++++.. +...+|..+..++|
T Consensus       207 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       207 GQPAEVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             CCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            9999999999975543 23677888777765

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=2.6e-33  Score=251.18  Aligned_cols=229  Identities=17%  Similarity=0.188  Sum_probs=181.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++|+++||||+||||+++|++|+++|++|++++|+ .+..+++.+++       .+.++.+|++|.+++.++++    
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~~~~~~~----   71 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDAVIDVVR----   71 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHHHHHHHH----
Confidence            4678999999999999999999999999999988764 44444433322       24678899999998877664    


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||...  +..+.+++++++++++|+.+++.+++.++|.|+.   .|+||++||..+.      
T Consensus        72 ------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~------  136 (237)
T PRK12742         72 ------KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGD------  136 (237)
T ss_pred             ------HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEeccccc------
Confidence                  2467999999999863  3456789999999999999999999999999864   4799999998763      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                   ..+.++...|++||++++.++++++.++.   +.+|+|++|+||+++|++........  .......
T Consensus       137 -------------~~~~~~~~~Y~~sKaa~~~~~~~la~~~~---~~gi~v~~v~Pg~~~t~~~~~~~~~~--~~~~~~~  198 (237)
T PRK12742        137 -------------RMPVAGMAAYAASKSALQGMARGLARDFG---PRGITINVVQPGPIDTDANPANGPMK--DMMHSFM  198 (237)
T ss_pred             -------------cCCCCCCcchHHhHHHHHHHHHHHHHHHh---hhCeEEEEEecCcccCCccccccHHH--HHHHhcC
Confidence                         13556778999999999999999999997   78999999999999999865432211  1112233


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      +++++.+|+|+|+.+.+++... ...+|..+..++|.
T Consensus       199 ~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg~  235 (237)
T PRK12742        199 AIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAF  235 (237)
T ss_pred             CCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCCc
Confidence            5678899999999999654332 25689998888763

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=259.00  Aligned_cols=219  Identities=24%  Similarity=0.292  Sum_probs=183.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|+++||||+||||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++++|++|.+++.++++++.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998888888777654  4568899999999999999999998


Q ss_pred             HHHhccCCCCCccEEEeccccccCC--CCC--CHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATS--SRL--TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~--~~~--~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +      .++++|++|||||+....  .+.  +.++++.++++|+.|++.++++++|.|++.+ .|+||++||.++..  
T Consensus       113 ~------~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--  183 (293)
T PRK05866        113 K------RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLS--  183 (293)
T ss_pred             H------HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcC--
Confidence            8      568899999999986432  221  3578899999999999999999999998776 68999999976541  


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       .+.+....|++||+|+++++++++.|+.   +.+|+|++++||+++|++........      
T Consensus       184 -----------------~~~p~~~~Y~asKaal~~l~~~la~e~~---~~gI~v~~v~pg~v~T~~~~~~~~~~------  237 (293)
T PRK05866        184 -----------------EASPLFSVYNASKAALSAVSRVIETEWG---DRGVHSTTLYYPLVATPMIAPTKAYD------  237 (293)
T ss_pred             -----------------CCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEcCcccCcccccccccc------
Confidence                             1345667899999999999999999998   78999999999999999975421110      


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcC
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~  317 (369)
                         .. ...+|+++|+.++.++..
T Consensus       238 ---~~-~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        238 ---GL-PALTADEAAEWMVTAART  257 (293)
T ss_pred             ---CC-CCCCHHHHHHHHHHHHhc
Confidence               01 246999999999977654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=3.4e-33  Score=255.14  Aligned_cols=242  Identities=21%  Similarity=0.216  Sum_probs=183.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ++++||||++|||++++++|+++|++|++++| +++.++++.+++.... +.++.++.+|++|++++.+.++++.+...+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            68999999999999999999999999999865 4667777777775433 346778999999998775544444332211


Q ss_pred             cCCCCCccEEEeccccccC--CCCCCH-----------HhHHHhhhhhhHHHHHHHHHHhHhhhcCC-----CCCeEEEE
Q 017580          143 SDMHSSIQLLINNAGILAT--SSRLTP-----------EGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNV  204 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~--~~~~~~-----------~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~~g~IV~v  204 (369)
                        .++++|+||||||...+  ..+.+.           +.+++++++|+.+++.++++++|.|+...     ..++||++
T Consensus        81 --~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~  158 (267)
T TIGR02685        81 --AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL  158 (267)
T ss_pred             --ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence              56899999999997532  212222           35889999999999999999999986431     24689999


Q ss_pred             cCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017580          205 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  284 (369)
Q Consensus       205 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~  284 (369)
                      +|..+.                    .+.++..+|++||+|+++++++|+.|++   +.||+|++|+||+++|+...  +
T Consensus       159 ~s~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~~~~~~~~--~  213 (267)
T TIGR02685       159 CDAMTD--------------------QPLLGFTMYTMAKHALEGLTRSAALELA---PLQIRVNGVAPGLSLLPDAM--P  213 (267)
T ss_pred             hhhhcc--------------------CCCcccchhHHHHHHHHHHHHHHHHHHh---hhCeEEEEEecCCccCcccc--c
Confidence            998876                    6677888999999999999999999997   78999999999999876321  1


Q ss_pred             hHHHHHHHHHHHHhh-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          285 SFLSLMAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       285 ~~~~~~~~~~~~~~~-~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ... ...+....+++ ++.+|+|+|+.+++++... ...+|..+..++|...
T Consensus       214 ~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       214 FEV-QEDYRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             hhH-HHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence            111 11111223443 6789999999999866543 2568999888877543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=251.69  Aligned_cols=238  Identities=24%  Similarity=0.292  Sum_probs=189.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-CCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|+++||||++|||.++|+.|+++|++|+++. |+++.++...++++..  +.++..++||++++++++++++++.+   
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~---   76 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQS---   76 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHH---
Confidence            36899999999999999999999999998764 6667777776666543  45789999999999999999999887   


Q ss_pred             ccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccccccccc
Q 017580          142 DSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~~~~~~~  216 (369)
                         .++++|++|||||+..   +..+.+.++++.++++|+.+++.+++.+++.|..++  ..++||++||.++.      
T Consensus        77 ---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~------  147 (248)
T PRK06947         77 ---AFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR------  147 (248)
T ss_pred             ---hcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc------
Confidence               5688999999999863   344678899999999999999999999999987543  24789999998876      


Q ss_pred             CCCcccccccccccCCCc-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                    .+.+ ....|++||++++++++++++++.   +.+|+|++++||+++|++................
T Consensus       148 --------------~~~~~~~~~Y~~sK~~~~~~~~~la~~~~---~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~  210 (248)
T PRK06947        148 --------------LGSPNEYVDYAGSKGAVDTLTLGLAKELG---PHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQ  210 (248)
T ss_pred             --------------CCCCCCCcccHhhHHHHHHHHHHHHHHhh---hhCcEEEEEeccCcccccccccCCHHHHHHHhhc
Confidence                          3333 245799999999999999999997   7899999999999999986532111111111122


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  331 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g  331 (369)
                      .|+++..+|+++|+.+++++.... ..+|.++..++|
T Consensus       211 ~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        211 TPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence            345667899999999997654432 578999887765

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.9e-34  Score=235.77  Aligned_cols=182  Identities=27%  Similarity=0.368  Sum_probs=167.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.|.++|||||++|||+++|++|.+.|.+|++++|+++++++++++      ...++...||+.|.++++++++++++  
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk--   74 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKK--   74 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHh--
Confidence            5689999999999999999999999999999999999999988876      46789999999999999999999999  


Q ss_pred             hccCCCCCccEEEeccccccCCC----CCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                          .+..+++||||||++....    +-..+..+..+++|+.++..+++.++|++.+++ .+.||+|||..+.      
T Consensus        75 ----~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLaf------  143 (245)
T COG3967          75 ----EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAF------  143 (245)
T ss_pred             ----hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEecccccc------
Confidence                7899999999999984432    345677788999999999999999999999987 7999999999998      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                                    .|....+.|+++|+|+..|+.+|+.+++   ..+|+|.-+.|-.|+|+
T Consensus       144 --------------vPm~~~PvYcaTKAaiHsyt~aLR~Qlk---~t~veVIE~~PP~V~t~  188 (245)
T COG3967         144 --------------VPMASTPVYCATKAAIHSYTLALREQLK---DTSVEVIELAPPLVDTT  188 (245)
T ss_pred             --------------CcccccccchhhHHHHHHHHHHHHHHhh---hcceEEEEecCCceecC
Confidence                          7778888999999999999999999997   77999999999999996

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-33  Score=254.70  Aligned_cols=237  Identities=21%  Similarity=0.307  Sum_probs=193.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+|+++||||+||||++++++|+++|++|++++|+.+.++++.+.+     +.++.++++|++|++++.++++++.+   
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~---   73 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVE---   73 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHH---
Confidence            4689999999999999999999999999999999988776655433     34678899999999999999999887   


Q ss_pred             ccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         ..+++|++|||||+..  +..+.+.+.+++++++|+.+++.+++.++|.|++++ .++||++||.++.         
T Consensus        74 ---~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~---------  140 (275)
T PRK08263         74 ---HFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGI---------  140 (275)
T ss_pred             ---HcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhc---------
Confidence               5688999999999863  345778899999999999999999999999998765 6899999998887         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHHHH-HH
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFLSL-MA  291 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-------~~~~~~-~~  291 (369)
                                 .+.+....|++||++++.+++.++.+++   +.||+|++++||+++|++....       ...... ..
T Consensus       141 -----------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~  206 (275)
T PRK08263        141 -----------SAFPMSGIYHASKWALEGMSEALAQEVA---EFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREE  206 (275)
T ss_pred             -----------CCCCCccHHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEecCCccCCccccccccCCCchhhhhHHHH
Confidence                       6667788999999999999999999997   7899999999999999987421       111111 11


Q ss_pred             HHHHHHhhCC-CCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          292 FTVLKLLGLL-QSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       292 ~~~~~~~~~~-~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      .....+.+++ .+|+|+|+.++.++ ..+...+.|+.+.+..+.
T Consensus       207 ~~~~~~~~~~~~~p~dva~~~~~l~-~~~~~~~~~~~~~~~~~~  249 (275)
T PRK08263        207 LAEQWSERSVDGDPEAAAEALLKLV-DAENPPLRLFLGSGVLDL  249 (275)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHH-cCCCCCeEEEeCchHHHH
Confidence            2222345566 89999999999654 344556788876554443

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-33  Score=251.76  Aligned_cols=244  Identities=23%  Similarity=0.269  Sum_probs=195.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||+||||.++|++|+++|++|++++|+.++++...+++...  +.++.++++|++|+++++++++++.+ 
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~-   85 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLE-   85 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999988888777777543  45788899999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHh-hhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL-LKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           ..+++|++|||||..  .+..+.+.+.+++++++|+.+++.+++++.|. |.+++ .++||++||..+.....  
T Consensus        86 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~--  157 (259)
T PRK08213         86 -----RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNP--  157 (259)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCC--
Confidence                 557899999999975  33456788999999999999999999999998 66554 58999999987652110  


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    ...++...|++||++++.+++++++++.   +.+|++++++||+++|++.+....... .......
T Consensus       158 --------------~~~~~~~~Y~~sKa~~~~~~~~~a~~~~---~~gi~v~~v~Pg~~~t~~~~~~~~~~~-~~~~~~~  219 (259)
T PRK08213        158 --------------PEVMDTIAYNTSKGAVINFTRALAAEWG---PHGIRVNAIAPGFFPTKMTRGTLERLG-EDLLAHT  219 (259)
T ss_pred             --------------ccccCcchHHHHHHHHHHHHHHHHHHhc---ccCEEEEEEecCcCCCcchhhhhHHHH-HHHHhcC
Confidence                          0112347899999999999999999997   789999999999999998765432111 1122233


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      +..++.+|+|+|+.+.+++... ...+|..+..++|.
T Consensus       220 ~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        220 PLGRLGDDEDLKGAALLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            4556779999999998555332 25678888877764

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-33  Score=254.70  Aligned_cols=244  Identities=17%  Similarity=0.222  Sum_probs=200.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||+||||.+++++|+++|++|++++|+.++.+...+++.......++.++++|++|++++.++++++.+  
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--   82 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA--   82 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH--
Confidence            678999999999999999999999999999999999888777777765543345788999999999999999999888  


Q ss_pred             hccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          141 LDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                          ..+++|++|||||...   +..+.+.+++++++++|+.+++.+++.+++.|.+++ .++||++||..+.       
T Consensus        83 ----~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~-------  150 (276)
T PRK05875         83 ----WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAAS-------  150 (276)
T ss_pred             ----HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhc-------
Confidence                5688999999999752   345678899999999999999999999999998765 6899999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~  296 (369)
                                   .+.++...|++||++++.+++.+++++.   ..+|++++|+||+++|++.......... .......
T Consensus       151 -------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  214 (276)
T PRK05875        151 -------------NTHRWFGAYGVTKSAVDHLMKLAADELG---PSWVRVNSIRPGLIRTDLVAPITESPELSADYRACT  214 (276)
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCccCCccccccccCHHHHHHHHcCC
Confidence                         5556778999999999999999999997   7899999999999999987543221111 1111223


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  334 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~  334 (369)
                      +..++.+|+|+|+.+++++.... ..+|+.+..++|..+
T Consensus       215 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        215 PLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeec
Confidence            45677899999999997654332 346898988887654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-33  Score=252.81  Aligned_cols=241  Identities=21%  Similarity=0.268  Sum_probs=196.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||+||||++++++|+++|++|++++|++++.++..+++.+.  +.++.++++|+++.++++++++++.+ 
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   80 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAE-   80 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999998888888887654  45788899999999999999999887 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhh-hcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL-KNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~-~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           ..+++|++|||||...  +..+.+.+.+++.+++|+.+++.+++.++|.| +..+ .++||++||..+.      
T Consensus        81 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~------  148 (262)
T PRK13394         81 -----RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSH------  148 (262)
T ss_pred             -----HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhc------
Confidence                 5688999999999863  33456789999999999999999999999999 5544 6899999998776      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH---------
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL---------  287 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~---------  287 (369)
                                    .+.+....|++||+++..+++.++.++.   +.+|++++++||+++|++.+......         
T Consensus       149 --------------~~~~~~~~y~~sk~a~~~~~~~la~~~~---~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~  211 (262)
T PRK13394        149 --------------EASPLKSAYVTAKHGLLGLARVLAKEGA---KHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEE  211 (262)
T ss_pred             --------------CCCCCCcccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcccchhhhhhhHhhhhccCCChH
Confidence                          5556677999999999999999999987   78999999999999999865432110         


Q ss_pred             HHHHHH--HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          288 SLMAFT--VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       288 ~~~~~~--~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ......  ...+.+.+.+++|+|+++++++... ...+|++|..++|.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        212 EVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            000000  0112346789999999999765433 24578988888764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=6e-33  Score=250.75  Aligned_cols=240  Identities=24%  Similarity=0.312  Sum_probs=198.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++++||||++|||.+++++|+++|++|++++|+.+..+++.+++...  +.++.++++|+++.++++++++++.+  
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~--   76 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQ--   76 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            35799999999999999999999999999999999998887777776543  45689999999999999999999988  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          ..+++|++|||||..  .+..+.+.+.+++.+++|+.+++.+++.+.|.|++++ .++||++||..+.        
T Consensus        77 ----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~--------  143 (250)
T TIGR03206        77 ----ALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAAR--------  143 (250)
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhc--------
Confidence                568899999999975  3344667889999999999999999999999998765 6899999999887        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----HH-HHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FL-SLMAFT  293 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----~~-~~~~~~  293 (369)
                                  .+.+....|+.||+|++.+++++++++.   ..+|++++++||+++|++......    .. ......
T Consensus       144 ------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~  208 (250)
T TIGR03206       144 ------------VGSSGEAVYAACKGGLVAFSKTMAREHA---RHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFT  208 (250)
T ss_pred             ------------cCCCCCchHHHHHHHHHHHHHHHHHHHh---HhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHH
Confidence                        5666778999999999999999999987   679999999999999998654321    11 111222


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ...+.+++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       209 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       209 RAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             hcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence            3345567789999999999654332 24578888877763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-33  Score=252.62  Aligned_cols=236  Identities=22%  Similarity=0.232  Sum_probs=189.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||+++||||++|||.+++++|+++|++|++++|+....++..+++     .  ..++++|++++++++++++++.+  
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~--   75 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAE--   75 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHH--
Confidence            67899999999999999999999999999999999987766655543     1  15789999999999999999987  


Q ss_pred             hccCCCCCccEEEeccccccC----CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          141 LDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                          ..+++|++|||||...+    ..+.+.+.+++.+++|+.+++++++.++|.|++++ .|+||++||..+.      
T Consensus        76 ----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~------  144 (255)
T PRK06057         76 ----TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAV------  144 (255)
T ss_pred             ----HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhc------
Confidence                56789999999997532    33567899999999999999999999999998765 6899999998765      


Q ss_pred             CCCcccccccccccCCC-chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLSLMAFT  293 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--~~~~~~~~  293 (369)
                                    .+. ++...|++||+++..+++.++.++.   +.+|+|++++||+++|++......  ........
T Consensus       145 --------------~g~~~~~~~Y~~sKaal~~~~~~l~~~~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~  207 (255)
T PRK06057        145 --------------MGSATSQISYTASKGGVLAMSRELGVQFA---RQGIRVNALCPGPVNTPLLQELFAKDPERAARRL  207 (255)
T ss_pred             --------------cCCCCCCcchHHHHHHHHHHHHHHHHHHH---hhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHH
Confidence                          332 3566899999999999999999997   779999999999999998654311  11111111


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ...+.+++.+|+|+|+.+.+++... ...+|..+..++|..
T Consensus       208 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        208 VHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGGIS  248 (255)
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCee
Confidence            2234567889999999998655432 256788887777654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=4.8e-33  Score=250.51  Aligned_cols=237  Identities=23%  Similarity=0.296  Sum_probs=195.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++++||||+||||++++++|+++|+.|++.+|+.+++++..+.+     +.++.++.+|+++.++++++++++.+ 
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEA-   76 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            567899999999999999999999999999999999987776655443     34688899999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||...  +..+.+.+++++++++|+.+++.+++++.+.+.+++ .++||++||..+.       
T Consensus        77 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  143 (245)
T PRK12936         77 -----DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGV-------  143 (245)
T ss_pred             -----HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhC-------
Confidence                 5688999999999864  334667889999999999999999999999887655 6899999998877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.+....|++||+++..+++.++.++.   ..++++++++||+++|++......... .......+
T Consensus       144 -------------~~~~~~~~Y~~sk~a~~~~~~~la~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~-~~~~~~~~  206 (245)
T PRK12936        144 -------------TGNPGQANYCASKAGMIGFSKSLAQEIA---TRNVTVNCVAPGFIESAMTGKLNDKQK-EAIMGAIP  206 (245)
T ss_pred             -------------cCCCCCcchHHHHHHHHHHHHHHHHHhh---HhCeEEEEEEECcCcCchhcccChHHH-HHHhcCCC
Confidence                         5667778999999999999999999987   789999999999999998765432211 11112235


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      .+++.+|+|+|+.+++++.... ..+|+.+..++|.
T Consensus       207 ~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        207 MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            5677899999999996653322 4578888877764

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-33  Score=253.24  Aligned_cols=239  Identities=24%  Similarity=0.275  Sum_probs=183.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc----chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS----HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~----~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++++.    +..++..++++..  +.++.++++|+++++++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHH
Confidence            46789999999999999999999999999977776543    3344445555433  45788999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEE-cCCccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV-TSFTHRNV  212 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~v-sS~~~~~~  212 (369)
                      +.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.++++++|.|++.   |+|+++ ||..+.  
T Consensus        83 ~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---~~iv~~~ss~~~~--  151 (257)
T PRK12744         83 AKA------AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN---GKIVTLVTSLLGA--  151 (257)
T ss_pred             HHH------hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC---CCEEEEecchhcc--
Confidence            988      5688999999999863  44567889999999999999999999999998653   677776 454432  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH---
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL---  289 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~---  289 (369)
                                         +.+....|++||+|++.|+++++.|+.   +.||+|++++||++.|++..........   
T Consensus       152 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~  209 (257)
T PRK12744        152 -------------------FTPFYSAYAGSKAPVEHFTRAASKEFG---ARGISVTAVGPGPMDTPFFYPQEGAEAVAYH  209 (257)
T ss_pred             -------------------cCCCcccchhhHHHHHHHHHHHHHHhC---cCceEEEEEecCccccchhccccccchhhcc
Confidence                               235567899999999999999999998   7899999999999999986432111110   


Q ss_pred             HHHHHHHHhh--CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017580          290 MAFTVLKLLG--LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  333 (369)
Q Consensus       290 ~~~~~~~~~~--~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~  333 (369)
                      .......++.  ++.+|+|+|+.+++++......+|+.+..++|..
T Consensus       210 ~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        210 KTAAALSPFSKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGYT  255 (257)
T ss_pred             cccccccccccCCCCCHHHHHHHHHHhhcccceeecceEeecCCcc
Confidence            0011112222  6789999999999765532244688877776643

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=250.21  Aligned_cols=239  Identities=23%  Similarity=0.255  Sum_probs=192.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+..+|+++||||++|||++++++|+++|++|+++++ +.+..+.+.+++...  +.++.++.+|++|.+++.++++++.
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~   82 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARAS   82 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3456899999999999999999999999999988766 455566666666543  4578899999999999999999988


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      ..+++|++|||||...  +..+.+.+.+++++++|+.+++.+++.+.+.|.++. .++||+++|..+.     
T Consensus        83 ~------~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~-----  150 (258)
T PRK09134         83 A------ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVW-----  150 (258)
T ss_pred             H------HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhc-----
Confidence            7      5688999999999763  345678899999999999999999999999998764 6899999997665     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.+....|++||++++.+++++++++.   + +|+|++++||++.|+.......   .......
T Consensus       151 ---------------~~~p~~~~Y~~sK~a~~~~~~~la~~~~---~-~i~v~~i~PG~v~t~~~~~~~~---~~~~~~~  208 (258)
T PRK09134        151 ---------------NLNPDFLSYTLSKAALWTATRTLAQALA---P-RIRVNAIGPGPTLPSGRQSPED---FARQHAA  208 (258)
T ss_pred             ---------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---C-CcEEEEeecccccCCcccChHH---HHHHHhc
Confidence                           4556667899999999999999999985   4 4999999999999875322111   1111222


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      .+.++..+|+|+|+++++++. .+..+|+++..++|...
T Consensus       209 ~~~~~~~~~~d~a~~~~~~~~-~~~~~g~~~~i~gg~~~  246 (258)
T PRK09134        209 TPLGRGSTPEEIAAAVRYLLD-APSVTGQMIAVDGGQHL  246 (258)
T ss_pred             CCCCCCcCHHHHHHHHHHHhc-CCCcCCCEEEECCCeec
Confidence            345667899999999997664 45668999988887643

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-33  Score=253.65  Aligned_cols=224  Identities=28%  Similarity=0.387  Sum_probs=184.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||++|||++++++|+++|++|++++|+++.+++..+++...+ ...+.++.+|+++++++.++++++.+     
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~-----   74 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHA-----   74 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHH-----
Confidence            479999999999999999999999999999999988888877776542 33456689999999999999999987     


Q ss_pred             CCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                       ..+++|++|||||..  .+..+.+.++++..+++|+.+++.+++.++|.|.+++..|+||++||..+.           
T Consensus        75 -~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------  142 (272)
T PRK07832         75 -AHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL-----------  142 (272)
T ss_pred             -hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc-----------
Confidence             568899999999975  344577899999999999999999999999999765435899999998876           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHHHHHHH
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAFTVLK  296 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~  296 (369)
                               .+.+....|++||+++.+++++++.|+.   ..+|+|++|+||+++|++.++...     ...........
T Consensus       143 ---------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  210 (272)
T PRK07832        143 ---------VALPWHAAYSASKFGLRGLSEVLRFDLA---RHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR  210 (272)
T ss_pred             ---------CCCCCCcchHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh
Confidence                     5667778899999999999999999997   789999999999999998764310     01111111112


Q ss_pred             HhhCCCCHHHHHHHHHHHhcC
Q 017580          297 LLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~  317 (369)
                      ..++..+|+|+|+.+++++..
T Consensus       211 ~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        211 FRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             cccCCCCHHHHHHHHHHHHhc
Confidence            234568999999999987743

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-33  Score=255.60  Aligned_cols=219  Identities=23%  Similarity=0.297  Sum_probs=178.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||+||||+++|++|+++|++|++++|+.+.++++.+        ..+.++.+|++|.++++++++++.+.   
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~~~~---   72 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA--------EGLEAFQLDYAEPESIAALVAQVLEL---   72 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCceEEEccCCCHHHHHHHHHHHHHH---
Confidence            6899999999999999999999999999999999877654431        24678999999999999999998662   


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        ..+++|++|||||+..  +..+.+.+.++.++++|+.|++.+++.++|.|++++ .|+||++||..+.          
T Consensus        73 --~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~----------  139 (277)
T PRK05993         73 --SGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGL----------  139 (277)
T ss_pred             --cCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhc----------
Confidence              2368999999999863  345678899999999999999999999999998776 6899999999887          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-------------
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-------------  287 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-------------  287 (369)
                                .+.+....|++||+++++++++|+.|++   +.||+|++|+||+++|++..+.....             
T Consensus       140 ----------~~~~~~~~Y~asK~a~~~~~~~l~~el~---~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~  206 (277)
T PRK05993        140 ----------VPMKYRGAYNASKFAIEGLSLTLRMELQ---GSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRA  206 (277)
T ss_pred             ----------CCCCccchHHHHHHHHHHHHHHHHHHhh---hhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHH
Confidence                      6677788999999999999999999998   88999999999999999876432110             


Q ss_pred             HHH---HHHH--HHHhhCCCCHHHHHHHHHHHhcCC
Q 017580          288 SLM---AFTV--LKLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       288 ~~~---~~~~--~~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      ...   ....  ..+.....+|+++|+.++.++...
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        207 AYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             HHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence            000   0000  001122468999999999876544

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-33  Score=252.83  Aligned_cols=213  Identities=19%  Similarity=0.189  Sum_probs=179.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcch-HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++||||++|||+++|++|+++| ++|++++|++++ ++++.++++..+ ..+++++.+|++|++++.++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-
Confidence            47899999999999999999999995 899999999886 888888886643 34789999999999999999988875 


Q ss_pred             HhccCCCCCccEEEeccccccCCC--CCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           . +++|++|||+|+..+..  ..+++...+++++|+.+++.+++.++|.|++++ .++||++||..+.       
T Consensus        85 -----~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~-------  150 (253)
T PRK07904         85 -----G-GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGE-------  150 (253)
T ss_pred             -----c-CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhc-------
Confidence                 2 78999999999864432  124455667899999999999999999999876 6899999999876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||+++.+|+++++.|+.   +.+|+|++++||+++|++.......           
T Consensus       151 -------------~~~~~~~~Y~~sKaa~~~~~~~l~~el~---~~~i~v~~v~Pg~v~t~~~~~~~~~-----------  203 (253)
T PRK07904        151 -------------RVRRSNFVYGSTKAGLDGFYLGLGEALR---EYGVRVLVVRPGQVRTRMSAHAKEA-----------  203 (253)
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCCEEEEEeeCceecchhccCCCC-----------
Confidence                         4456667899999999999999999997   7899999999999999987653211           


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC
Q 017580          298 LGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~  318 (369)
                       ....+|+|+|+.++..+..+
T Consensus       204 -~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        204 -PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             -CCCCCHHHHHHHHHHHHHcC
Confidence             12469999999999876543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=5.6e-33  Score=251.34  Aligned_cols=233  Identities=24%  Similarity=0.268  Sum_probs=192.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.         +...  +.++.++++|++++++++++++++.+ 
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   72 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLA-   72 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            47789999999999999999999999999999999986         1111  45688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||...  +..+.+.+++++.+++|+.+++.+++.+.|.|++++ .|+||++||..+.       
T Consensus        73 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~-------  139 (252)
T PRK08220         73 -----ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAH-------  139 (252)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhc-------
Confidence                 6688999999999863  445678899999999999999999999999998765 6899999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH---H------
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL---S------  288 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~---~------  288 (369)
                                   .+.++...|++||++++.+++++++|+.   +.+|+|++++||++.|++.+......   .      
T Consensus       140 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  203 (252)
T PRK08220        140 -------------VPRIGMAAYGASKAALTSLAKCVGLELA---PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGF  203 (252)
T ss_pred             -------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---HhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhH
Confidence                         5667778999999999999999999998   78999999999999999865431110   0      


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ........+++++.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       204 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~~  249 (252)
T PRK08220        204 PEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGGAT  249 (252)
T ss_pred             HHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCCee
Confidence            011122235667899999999999766443 367888888887754

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.3e-33  Score=250.34  Aligned_cols=239  Identities=22%  Similarity=0.254  Sum_probs=192.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      ++||||++|||+++++.|+++|++|++++|+ .+.+++..+++........+..+++|++|+++++++++++.+      
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~------   75 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD------   75 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH------
Confidence            8999999999999999999999999999998 677777777776544334566789999999999999999988      


Q ss_pred             CCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          145 MHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+.            
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~------------  142 (251)
T PRK07069         76 AMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAF------------  142 (251)
T ss_pred             HcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhc------------
Confidence            5688999999999863  345678899999999999999999999999998765 6899999999887            


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----HHHHHHHHHHHHh
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FLSLMAFTVLKLL  298 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~  298 (369)
                              .+.++...|++||+++..++++++.|+... ..+|+|++|+||+++|++.+....    ...........+.
T Consensus       143 --------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  213 (251)
T PRK07069        143 --------KAEPDYTAYNASKAAVASLTKSIALDCARR-GLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPL  213 (251)
T ss_pred             --------cCCCCCchhHHHHHHHHHHHHHHHHHhccc-CCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCC
Confidence                    566778899999999999999999998721 346999999999999999764321    1111111122344


Q ss_pred             hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          299 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      +++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g~  248 (251)
T PRK07069        214 GRLGEPDDVAHAVLYLASDESRFVTGAELVIDGGI  248 (251)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCe
Confidence            67789999999999654322 25678887777664

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=248.32  Aligned_cols=238  Identities=23%  Similarity=0.278  Sum_probs=188.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++++||||++|||.+++++|+++|++|+++.+ +++..++..+++...  +.++.++++|++|.+++.++++++.+   
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~---   76 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDR---   76 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHH---
Confidence            479999999999999999999999999988864 455556665555443  35688999999999999999999988   


Q ss_pred             ccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccccccccc
Q 017580          142 DSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~~~~~~~  216 (369)
                         .++++|++|||||...   +..+.+.+++++++++|+.+++.+++.+++.|.++.  .+|+||++||.++.      
T Consensus        77 ---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~------  147 (248)
T PRK06123         77 ---ELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR------  147 (248)
T ss_pred             ---HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc------
Confidence               5688999999999863   234668899999999999999999999999997542  24799999998876      


Q ss_pred             CCCcccccccccccCCCch-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~-~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                    .+.+. ...|++||+++++++++++.++.   +++|+|++++||.+.|++................
T Consensus       148 --------------~~~~~~~~~Y~~sKaa~~~~~~~la~~~~---~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~  210 (248)
T PRK06123        148 --------------LGSPGEYIDYAASKGAIDTMTIGLAKEVA---AEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAG  210 (248)
T ss_pred             --------------CCCCCCccchHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCcccCchhhccCCHHHHHHHHhc
Confidence                          44443 35799999999999999999997   7899999999999999975432111111112223


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  331 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g  331 (369)
                      .|+++..+|+|+|+.+++++.... ..+|..|..++|
T Consensus       211 ~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        211 IPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            456677899999999996544322 467888877654

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=251.76  Aligned_cols=222  Identities=22%  Similarity=0.269  Sum_probs=187.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++++||||+||||++++++|+++|++|++++|+.++++++.+++...  +.++.++++|+++++++.++++++.+     
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~-----   73 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEE-----   73 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH-----
Confidence            47999999999999999999999999999999998888888887654  45788999999999999999999988     


Q ss_pred             CCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                       ..+++|++|||||+..  +..+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+.           
T Consensus        74 -~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~-----------  140 (270)
T PRK05650         74 -KWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGL-----------  140 (270)
T ss_pred             -HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhc-----------
Confidence             5688999999999863  355778899999999999999999999999998765 6899999999887           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH-HHHHHHhhC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-FTVLKLLGL  300 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~  300 (369)
                               .+.+..+.|++||+++.+++++|+.|+.   +.||++++|+||+++|++............ .......+.
T Consensus       141 ---------~~~~~~~~Y~~sKaa~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  208 (270)
T PRK05650        141 ---------MQGPAMSSYNVAKAGVVALSETLLVELA---DDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKS  208 (270)
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcC
Confidence                     6677888999999999999999999997   789999999999999998765422111111 111111224


Q ss_pred             CCCHHHHHHHHHHHhcC
Q 017580          301 LQSPEKGINSVLDAALA  317 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~  317 (369)
                      ..+++|+|+.++.++..
T Consensus       209 ~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        209 PITAADIADYIYQQVAK  225 (270)
T ss_pred             CCCHHHHHHHHHHHHhC
Confidence            57999999999977643

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-33  Score=248.22  Aligned_cols=228  Identities=20%  Similarity=0.208  Sum_probs=188.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC--hHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS--FQSVLKFKDSL  136 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~--~~~i~~~~~~i  136 (369)
                      .++++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.. +..+.++.+|+++  .+++.++.+++
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHH
Confidence            45789999999999999999999999999999999999988888877775542 3457788999986  56888888888


Q ss_pred             HHHHhccCCC-CCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          137 QQWLLDSDMH-SSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       137 ~~~~~~~~~~-~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      .+      .. +++|++|||||..   .+..+.+.+.+++++++|+.|++.+++.++|.|.+.+ .++||++||..+.  
T Consensus        81 ~~------~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~--  151 (239)
T PRK08703         81 AE------ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGE--  151 (239)
T ss_pred             HH------HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccc--
Confidence            87      34 6799999999975   3456778899999999999999999999999998765 6899999998876  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCC-CeEEEEecCCcccCCccccc-hhHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR-HVSVIAADPGVVKTNIMREV-PSFLSLM  290 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~-~i~v~~v~PG~v~T~~~~~~-~~~~~~~  290 (369)
                                        .+.++...|++||++++.++++++.|+.   .. +|+|++|+||+|+|++.... +....  
T Consensus       152 ------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--  208 (239)
T PRK08703        152 ------------------TPKAYWGGFGASKAALNYLCKVAADEWE---RFGNLRANVLVPGPINSPQRIKSHPGEAK--  208 (239)
T ss_pred             ------------------cCCCCccchHHhHHHHHHHHHHHHHHhc---cCCCeEEEEEecCcccCccccccCCCCCc--
Confidence                              6667778999999999999999999997   44 79999999999999986543 22110  


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEe
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFF  327 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~  327 (369)
                              ....+++|++..+++++.. ++..+|+.+.
T Consensus       209 --------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  238 (239)
T PRK08703        209 --------SERKSYGDVLPAFVWWASAESKGRSGEIVY  238 (239)
T ss_pred             --------cccCCHHHHHHHHHHHhCccccCcCCeEee
Confidence                    1246999999999976643 3456776653

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-33  Score=252.25  Aligned_cols=211  Identities=22%  Similarity=0.317  Sum_probs=180.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +++++||||++|||++++++|+++|++|++++|+.+++++..+++...  . ++.++.+|+++++++.++++++.+    
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~----   74 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIA----   74 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHH----
Confidence            478999999999999999999999999999999988877766655322  2 789999999999999999999988    


Q ss_pred             cCCCCCccEEEeccccccCC---CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          143 SDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                        .++++|++|||||+....   .+.+.+.+++++++|+.|++.+++.++|.|++++ .++||++||.++.         
T Consensus        75 --~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~---------  142 (257)
T PRK07024         75 --AHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGV---------  142 (257)
T ss_pred             --hCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhc---------
Confidence              668899999999986422   2267899999999999999999999999998776 6899999999887         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+.+....|++||++++.++++++.|++   ..+|+|++++||+++|++.......           ..
T Consensus       143 -----------~~~~~~~~Y~asK~a~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~~  197 (257)
T PRK07024        143 -----------RGLPGAGAYSASKAAAIKYLESLRVELR---PAGVRVVTIAPGYIRTPMTAHNPYP-----------MP  197 (257)
T ss_pred             -----------CCCCCCcchHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCCCcCchhhcCCCC-----------CC
Confidence                       6677788999999999999999999997   7899999999999999986542210           11


Q ss_pred             CCCCHHHHHHHHHHHhcC
Q 017580          300 LLQSPEKGINSVLDAALA  317 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~  317 (369)
                      ...+|+++|+.++.++..
T Consensus       198 ~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        198 FLMDADRFAARAARAIAR  215 (257)
T ss_pred             CccCHHHHHHHHHHHHhC
Confidence            235899999999976643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-33  Score=250.52  Aligned_cols=241  Identities=23%  Similarity=0.273  Sum_probs=198.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||+++||++++++|+++|++|++++|+.++.++..+++...  +.+++.+.+|++++++++++++++.+  
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~--   77 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVE--   77 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            46799999999999999999999999999999999998888887777653  46789999999999999999999988  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          ..+++|++|||||...  +..+.+.+.++.++++|+.+++.+++.++|.|++++ .++||++||..+.        
T Consensus        78 ----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~--------  144 (258)
T PRK12429         78 ----TFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGL--------  144 (258)
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhc--------
Confidence                5678999999999753  344668889999999999999999999999998876 6899999999887        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---------HHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---------LSL  289 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~---------~~~  289 (369)
                                  .+.++...|+++|+++..+++.++.++.   +.+|++++++||++.|++.......         ...
T Consensus       145 ------------~~~~~~~~y~~~k~a~~~~~~~l~~~~~---~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~  209 (258)
T PRK12429        145 ------------VGSAGKAAYVSAKHGLIGLTKVVALEGA---THGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEV  209 (258)
T ss_pred             ------------cCCCCcchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHH
Confidence                        6677888999999999999999999987   7899999999999999886432110         000


Q ss_pred             H--HHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017580          290 M--AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  333 (369)
Q Consensus       290 ~--~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~  333 (369)
                      .  ......+.+.+.+++|+|+.+++++.... ..+|++|..++|..
T Consensus       210 ~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~  256 (258)
T PRK12429        210 LEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGWT  256 (258)
T ss_pred             HHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCEe
Confidence            0  01111233567899999999996554332 45789888887754

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=252.95  Aligned_cols=230  Identities=24%  Similarity=0.257  Sum_probs=184.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+|+++||||+||||++++++|+++|++|++++|++++++.+.+.    . +.++..+.+|++|++++.++++.+.+   
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~---   74 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEA---   74 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHH---
Confidence            468999999999999999999999999999999998766554332    1 34688899999999999999999887   


Q ss_pred             ccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .++++|++|||||..  .+..+.+.+.+++++++|+.|++.+++.++|.|++++ .++||++||.++.         
T Consensus        75 ---~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~---------  141 (277)
T PRK06180         75 ---TFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGL---------  141 (277)
T ss_pred             ---HhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEeccccc---------
Confidence               567899999999985  3455778899999999999999999999999998776 6899999999887         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--------hhHHHHH-
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--------PSFLSLM-  290 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--------~~~~~~~-  290 (369)
                                 .+.++...|++||++++.++++++.|++   ..|+++++++||+++|++....        ....... 
T Consensus       142 -----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  207 (277)
T PRK06180        142 -----------ITMPGIGYYCGSKFALEGISESLAKEVA---PFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFG  207 (277)
T ss_pred             -----------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHH
Confidence                       6667888999999999999999999997   7899999999999999874321        1111101 


Q ss_pred             H---HHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          291 A---FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       291 ~---~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      .   .....+..++.+|+|+|+.++.++..+ .....|+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~-~~~~~~~~  246 (277)
T PRK06180        208 PIRQAREAKSGKQPGDPAKAAQAILAAVESD-EPPLHLLL  246 (277)
T ss_pred             HHHHHHHhhccCCCCCHHHHHHHHHHHHcCC-CCCeeEec
Confidence            0   111122335679999999999765433 33334544

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-32  Score=248.73  Aligned_cols=245  Identities=22%  Similarity=0.246  Sum_probs=198.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++|+++||||++|||++++++|+++|++ |++++|+.+..+...+++...  +.++.++.+|+++++++.++++.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999998 999999988777777777433  55788899999999999999999887


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|++|||||...  +..+.+.+.+++++++|+.+++.+++.++|.|.+++..|+||++||..+.      
T Consensus        81 ------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~------  148 (260)
T PRK06198         81 ------AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH------  148 (260)
T ss_pred             ------HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc------
Confidence                  5678999999999863  23467889999999999999999999999999776435899999999877      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-----HHHH-
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-----LSLM-  290 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-----~~~~-  290 (369)
                                    .+.+....|+.||++++.++++++.|+.   ..+|++++++||++.|++.......     .... 
T Consensus       149 --------------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~  211 (260)
T PRK06198        149 --------------GGQPFLAAYCASKGALATLTRNAAYALL---RNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLE  211 (260)
T ss_pred             --------------cCCCCcchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeccccCcchhhhhhhccCCChHHHH
Confidence                          5556778999999999999999999997   7899999999999999975321110     0111 


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  335 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~~  335 (369)
                      ......+++++.+++|+|+.+++++.... ..+|+.+..+++..-.
T Consensus       212 ~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~~~~  257 (260)
T PRK06198        212 KAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSVWGA  257 (260)
T ss_pred             HHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECCccccc
Confidence            11112245567899999999997654332 4689998888766543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.1e-32  Score=246.37  Aligned_cols=238  Identities=21%  Similarity=0.282  Sum_probs=196.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++++||||++|||.++++.|+++|++|++++|+.+++++..++++..  +.++..+++|+++.++++++++++.+  
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--   78 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAE--   78 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH--
Confidence            57899999999999999999999999999999999998888887777654  45788999999999999999999887  


Q ss_pred             hccCCCCCccEEEeccccccCC-----------CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          141 LDSDMHSSIQLLINNAGILATS-----------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~-----------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                          ..+++|++|||||...+.           .+.+.+.++.++++|+.+++.+++.++|.|.++...++||++||...
T Consensus        79 ----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~  154 (253)
T PRK08217         79 ----DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR  154 (253)
T ss_pred             ----HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc
Confidence                567899999999975321           45578899999999999999999999999977643578999998643


Q ss_pred             cccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH
Q 017580          210 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL  289 (369)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~  289 (369)
                                           .+.++...|++||+|++.++++++.++.   +.+|++++++||+++|++.+...+... 
T Consensus       155 ---------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~-  209 (253)
T PRK08217        155 ---------------------AGNMGQTNYSASKAGVAAMTVTWAKELA---RYGIRVAAIAPGVIETEMTAAMKPEAL-  209 (253)
T ss_pred             ---------------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEeeCCCcCccccccCHHHH-
Confidence                                 3445678899999999999999999997   789999999999999999866433211 


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                      .......+.+++.+|+|+|+.+.+++ .+...+|+.+..++|.
T Consensus       210 ~~~~~~~~~~~~~~~~~~a~~~~~l~-~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        210 ERLEKMIPVGRLGEPEEIAHTVRFII-ENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHhcCCcCCCcCHHHHHHHHHHHH-cCCCcCCcEEEeCCCc
Confidence            11222335566789999999999766 3445678888877765

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=248.35  Aligned_cols=239  Identities=24%  Similarity=0.286  Sum_probs=187.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |+++||||+||||+++|++|+++|++|++++|++ +.++++.+.    . +.+++++++|++++++++++++++.+.+..
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ----Y-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc----c-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            5899999999999999999999999999999987 333332221    1 457889999999999999999998764321


Q ss_pred             cCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          143 SDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                      .  .....++|+|||...   +..+.+.+.+++.+++|+.+++.+++.++|.|++.+..++||++||..+.         
T Consensus        77 ~--~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~---------  145 (251)
T PRK06924         77 D--NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK---------  145 (251)
T ss_pred             c--cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc---------
Confidence            0  011228999999753   35577899999999999999999999999999875435799999998876         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----H-HHHHHHHH
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----F-LSLMAFTV  294 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----~-~~~~~~~~  294 (369)
                                 .+.++...|++||++++.+++.++.|++. .+.+|+|++|+||+++|++......    . ........
T Consensus       146 -----------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  213 (251)
T PRK06924        146 -----------NPYFGWSAYCSSKAGLDMFTQTVATEQEE-EEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFIT  213 (251)
T ss_pred             -----------CCCCCcHHHhHHHHHHHHHHHHHHHHhhh-cCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHH
Confidence                       67788899999999999999999999752 1468999999999999998653211    0 11112223


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  330 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~  330 (369)
                      ..+.+++.+|+|+|+.+++++......+|.++..++
T Consensus       214 ~~~~~~~~~~~dva~~~~~l~~~~~~~~G~~~~v~~  249 (251)
T PRK06924        214 LKEEGKLLSPEYVAKALRNLLETEDFPNGEVIDIDE  249 (251)
T ss_pred             HhhcCCcCCHHHHHHHHHHHHhcccCCCCCEeehhh
Confidence            345678899999999999876655667888886553

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-32  Score=246.75  Aligned_cols=227  Identities=24%  Similarity=0.245  Sum_probs=182.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+....      .     ..++.++.+|++++      ++++.+ 
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~-   63 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFD-   63 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHH-
Confidence            36789999999999999999999999999999999985421      0     24678999999987      333333 


Q ss_pred             HhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           ..+++|++|||||+.   .+..+.+.+++++.+++|+.+++.++++++|.|++++ .|+||++||..+.      
T Consensus        64 -----~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~------  131 (235)
T PRK06550         64 -----WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASF------  131 (235)
T ss_pred             -----hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhc------
Confidence                 357899999999975   3445778899999999999999999999999998765 6899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~  295 (369)
                                    .+.++...|+++|+++..++++++.|+.   +.||+|++|+||+++|++... .+...........
T Consensus       132 --------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~  194 (235)
T PRK06550        132 --------------VAGGGGAAYTASKHALAGFTKQLALDYA---KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARE  194 (235)
T ss_pred             --------------cCCCCCcccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCCccCcccccccCchHHHHHHhcc
Confidence                          5666778999999999999999999997   789999999999999998653 2211111111223


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .+++++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       195 ~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~~  233 (235)
T PRK06550        195 TPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGWT  233 (235)
T ss_pred             CCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCcee
Confidence            45677889999999999765432 356899988887753

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-32  Score=247.54  Aligned_cols=241  Identities=26%  Similarity=0.359  Sum_probs=193.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|+++||||++|||.++|++|+++|++|++++|+. +..++..+.++..  +.++.++.+|+++++++.++++++.+   
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---   76 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQA---   76 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH---
Confidence            37899999999999999999999999999999874 3445555555433  45789999999999999999999988   


Q ss_pred             ccCCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC-----CCeEEEEcCCccccc
Q 017580          142 DSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-----PSRIVNVTSFTHRNV  212 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-----~g~IV~vsS~~~~~~  212 (369)
                         .++++|++|||||...    +..+.+.+.+++.+++|+.+++.+++++.+.|.++..     .++||++||..+.  
T Consensus        77 ---~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--  151 (256)
T PRK12745         77 ---AWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI--  151 (256)
T ss_pred             ---hcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc--
Confidence               5688999999999753    2346688999999999999999999999999987642     3579999998887  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                                        .+.++...|+.||++++.++++++.|+.   +.+|++++++||.+.|++.............
T Consensus       152 ------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~  210 (256)
T PRK12745        152 ------------------MVSPNRGEYCISKAGLSMAAQLFAARLA---EEGIGVYEVRPGLIKTDMTAPVTAKYDALIA  210 (256)
T ss_pred             ------------------cCCCCCcccHHHHHHHHHHHHHHHHHHH---HhCCEEEEEecCCCcCccccccchhHHhhhh
Confidence                              5666778999999999999999999997   7899999999999999987654322111111


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ....|++++.+|+|+|+.+.+++... +..+|..|..++|...
T Consensus       211 ~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        211 KGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             hcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            11234556789999999999654322 2457888888877543

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-32  Score=249.15  Aligned_cols=239  Identities=25%  Similarity=0.337  Sum_probs=191.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++|+++||||+||||++++++|+++|++|++++|+.+..++..+++.....+.++.++.+|++|++++++ ++++.+   
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~---   77 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK---   77 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH---
Confidence            5789999999999999999999999999999999998888877776654445679999999999999999 888877   


Q ss_pred             ccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         ..+++|++|||||...+  ..+.+.+.+++++++|+.+++.+++.++|.|++.+ .++||++||..+.         
T Consensus        78 ---~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~---------  144 (280)
T PRK06914         78 ---EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGR---------  144 (280)
T ss_pred             ---hcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccc---------
Confidence               56889999999998643  34668899999999999999999999999998765 6899999998877         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------H-HH
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------F-LS  288 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~-~~  288 (369)
                                 .+.++...|++||++++.++++++.++.   +.+|++++++||+++|++......          . ..
T Consensus       145 -----------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  210 (280)
T PRK06914        145 -----------VGFPGLSPYVSSKYALEGFSESLRLELK---PFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKE  210 (280)
T ss_pred             -----------CCCCCCchhHHhHHHHHHHHHHHHHHhh---hhCCEEEEEecCCcccchhhccccccccccccccchHH
Confidence                       6667788999999999999999999987   789999999999999997642110          0 00


Q ss_pred             HH---HHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017580          289 LM---AFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  333 (369)
Q Consensus       289 ~~---~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~  333 (369)
                      ..   ......+.+++.+|+|+|+++++++..+..  +.+|..+++..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~--~~~~~~~~~~~  256 (280)
T PRK06914        211 YMKKIQKHINSGSDTFGNPIDVANLIVEIAESKRP--KLRYPIGKGVK  256 (280)
T ss_pred             HHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCCC--CcccccCCchH
Confidence            00   011112345678999999999976654432  24555444443

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=3.5e-32  Score=276.74  Aligned_cols=249  Identities=20%  Similarity=0.208  Sum_probs=203.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +...+++|+++||||++|||+++|++|+++|++|++++|+.+.++...+++....+..++..+++|++|+++++++++++
T Consensus       408 ~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i  487 (676)
T TIGR02632       408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV  487 (676)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999888888777765544457889999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|++|||||+..  +..+.+.+.|+..+++|+.+++++++.++|.|++++.+++||++||..+.    
T Consensus       488 ~~------~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~----  557 (676)
T TIGR02632       488 AL------AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAV----  557 (676)
T ss_pred             HH------hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhc----
Confidence            88      6789999999999863  44567889999999999999999999999999876545799999998877    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccC--Ccccc-c--------
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT--NIMRE-V--------  283 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T--~~~~~-~--------  283 (369)
                                      .+.++..+|++||+++++++++++.|++   +.||+||+|+||.|.|  .+... .        
T Consensus       558 ----------------~~~~~~~aY~aSKaA~~~l~r~lA~el~---~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~  618 (676)
T TIGR02632       558 ----------------YAGKNASAYSAAKAAEAHLARCLAAEGG---TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAY  618 (676)
T ss_pred             ----------------CCCCCCHHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEECCceecCcccccccchhhhhhcc
Confidence                            6677788999999999999999999997   7899999999999864  33221 0        


Q ss_pred             --hhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          284 --PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       284 --~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                        ........+....++++..+|+|+|+.+++++... ...+|+++..++|...
T Consensus       619 ~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       619 GIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             cCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCchh
Confidence              00000111223345677889999999999654322 3668999998888654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.6e-32  Score=244.15  Aligned_cols=238  Identities=19%  Similarity=0.254  Sum_probs=192.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |+++||||++|||.++|++|+++|++|++++|+.. ...+.......  .+.++.++.+|+++++++.++++++.+    
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~----   76 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEE----   76 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHH----
Confidence            68999999999999999999999999999999854 12222222221  245689999999999999999999988    


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        ..+++|++|||||...  +..+.+.+.+++++++|+.+++++++.++|.|++.+ .++||++||..+.          
T Consensus        77 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~----------  143 (245)
T PRK12824         77 --EEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGL----------  143 (245)
T ss_pred             --HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhc----------
Confidence              5688999999999863  345678999999999999999999999999998765 6899999998877          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhC
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  300 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  300 (369)
                                .+.++...|++||+++++++++++.++.   +.+|++++++||++.|++.+...... ........+++.
T Consensus       144 ----------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~  209 (245)
T PRK12824        144 ----------KGQFGQTNYSAAKAGMIGFTKALASEGA---RYGITVNCIAPGYIATPMVEQMGPEV-LQSIVNQIPMKR  209 (245)
T ss_pred             ----------cCCCCChHHHHHHHHHHHHHHHHHHHHH---HhCeEEEEEEEcccCCcchhhcCHHH-HHHHHhcCCCCC
Confidence                      5667778999999999999999999987   78999999999999999876543321 111222335567


Q ss_pred             CCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          301 LQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ..+++|+|+.+.+++... ...+|+.+..++|..+
T Consensus       210 ~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        210 LGTPEEIAAAVAFLVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             CCCHHHHHHHHHHHcCccccCccCcEEEECCCeec
Confidence            789999999998655332 2567999988888653

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-32  Score=245.11  Aligned_cols=212  Identities=20%  Similarity=0.308  Sum_probs=184.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||++|||++++++|+++|++|++++|++++++++.+++....++.+++++++|+++++++.++++++.+    
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~----   77 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD----   77 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH----
Confidence            6899999999999999999999999999999999998888888877766677899999999999999999999988    


Q ss_pred             cCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        .++++|++|||||+..+  ..+.+.+.+++++++|+.+++.+++.++|.|++.+ .++||++||..+.          
T Consensus        78 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~----------  144 (248)
T PRK08251         78 --ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAV----------  144 (248)
T ss_pred             --HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccc----------
Confidence              66899999999998633  34557788999999999999999999999998765 6899999998876          


Q ss_pred             ccccccccccCCCch-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          221 TITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~-~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                .+.+. ...|+.||++++.+++.++.++.   ..+|++++|+||+++|++.+....            ..
T Consensus       145 ----------~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~v~t~~~~~~~~------------~~  199 (248)
T PRK08251        145 ----------RGLPGVKAAYAASKAGVASLGEGLRAELA---KTPIKVSTIEPGYIRSEMNAKAKS------------TP  199 (248)
T ss_pred             ----------cCCCCCcccHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCcCcchhhhcccc------------CC
Confidence                      44443 57899999999999999999997   789999999999999998765322            11


Q ss_pred             CCCCHHHHHHHHHHHhc
Q 017580          300 LLQSPEKGINSVLDAAL  316 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l  316 (369)
                      ...+++++|+.++..+.
T Consensus       200 ~~~~~~~~a~~i~~~~~  216 (248)
T PRK08251        200 FMVDTETGVKALVKAIE  216 (248)
T ss_pred             ccCCHHHHHHHHHHHHh
Confidence            35689999999997664

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=7.3e-32  Score=248.88  Aligned_cols=227  Identities=22%  Similarity=0.272  Sum_probs=185.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++++++|||||+||||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++.+.+ 
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~-   79 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALE-   79 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999988888887777554  45788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCC-----CeEEEEcCCccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-----SRIVNVTSFTHRNV  212 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~-----g~IV~vsS~~~~~~  212 (369)
                           .++++|++|||||....  ..+.+.+.+++.+++|+.|++.++++++|.|.++...     |+||++||.++.  
T Consensus        80 -----~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--  152 (287)
T PRK06194         80 -----RFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL--  152 (287)
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc--
Confidence                 67899999999998643  4467889999999999999999999999999877532     799999999887  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH------
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF------  286 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~------  286 (369)
                                        .+.++...|++||++++.++++++.++... ..+|++++++||++.|++.......      
T Consensus       153 ------------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~-~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~  213 (287)
T PRK06194        153 ------------------LAPPAMGIYNVSKHAVVSLTETLYQDLSLV-TDQVGASVLCPYFVPTGIWQSERNRPADLAN  213 (287)
T ss_pred             ------------------cCCCCCcchHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEEEeCcccCccccccccCchhccc
Confidence                              566777899999999999999999998631 4679999999999999986542110      


Q ss_pred             -------HHHHH-HHHHHHhhCCCCHHHHHHHHHHHh
Q 017580          287 -------LSLMA-FTVLKLLGLLQSPEKGINSVLDAA  315 (369)
Q Consensus       287 -------~~~~~-~~~~~~~~~~~~~~e~A~~v~~~~  315 (369)
                             ..... ...........+++|+|+.++..+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~  250 (287)
T PRK06194        214 TAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAI  250 (287)
T ss_pred             CccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHH
Confidence                   00000 000001112369999999999765

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-32  Score=242.43  Aligned_cols=210  Identities=15%  Similarity=0.162  Sum_probs=170.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      .++||||++|||++++++|+++|++|++++|+.+++++..+++       ++.++++|++++++++++++++.+      
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~------   68 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH------   68 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh------
Confidence            4899999999999999999999999999999988776665543       356789999999999998877642      


Q ss_pred             CCCCccEEEecccccc----C----CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          145 MHSSIQLLINNAGILA----T----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~----~----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                         ++|++|||||...    +    ..+ +.++|++++++|+.++++++++++|.|++   .|+||++||.+.       
T Consensus        69 ---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~-------  134 (223)
T PRK05884         69 ---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPENP-------  134 (223)
T ss_pred             ---cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCCC-------
Confidence               5999999998531    1    112 46889999999999999999999999964   489999999652       


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                       +....|++||+|+.+|+++++.|++   ++||+||+|+||+++|++.+...          ..
T Consensus       135 -----------------~~~~~Y~asKaal~~~~~~la~e~~---~~gI~v~~v~PG~v~t~~~~~~~----------~~  184 (223)
T PRK05884        135 -----------------PAGSAEAAIKAALSNWTAGQAAVFG---TRGITINAVACGRSVQPGYDGLS----------RT  184 (223)
T ss_pred             -----------------CCccccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCccCchhhhhcc----------CC
Confidence                             2346899999999999999999998   88999999999999998753211          01


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      |   ..+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       185 p---~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        185 P---PPVAAEIARLALFLTTPAARHITGQTLHVSHGALA  220 (223)
T ss_pred             C---CCCHHHHHHHHHHHcCchhhccCCcEEEeCCCeec
Confidence            1   248999999999654332 3668999888887654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.5e-32  Score=243.34  Aligned_cols=239  Identities=27%  Similarity=0.355  Sum_probs=199.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++|+++||||++|||.+++++|+++|++|+++ +|+.++.++..+.+...  +.++.++.+|+++++++.++++++.+ 
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   79 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVE-   79 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            568999999999999999999999999999999 99988887777776553  45789999999999999999999887 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ..+++|++|||||...  +..+.+.+++++.+++|+.+++.+++.+.|.+.+++ .+++|++||..+.       
T Consensus        80 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~-------  146 (247)
T PRK05565         80 -----KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGL-------  146 (247)
T ss_pred             -----HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhc-------
Confidence                 5578999999999863  334678899999999999999999999999998775 6899999998876       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.+....|+.||+++..++++++.++.   ..|+++++++||+++|++.+....... .......+
T Consensus       147 -------------~~~~~~~~y~~sK~a~~~~~~~~~~~~~---~~gi~~~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~  209 (247)
T PRK05565        147 -------------IGASCEVLYSASKGAVNAFTKALAKELA---PSGIRVNAVAPGAIDTEMWSSFSEEDK-EGLAEEIP  209 (247)
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---HcCeEEEEEEECCccCccccccChHHH-HHHHhcCC
Confidence                         5556677899999999999999999997   789999999999999998876543211 11111233


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      .++..+|+++|+.+++++.... ..+|+++..+.|.
T Consensus       210 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        210 LGRLGKPEEIAKVVLFLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             CCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence            4566799999999997766544 6689999888764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.3e-33  Score=233.93  Aligned_cols=183  Identities=25%  Similarity=0.337  Sum_probs=165.6

Q ss_pred             CCEEEEeCCC-CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas-~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|.|+|||++ ||||.++|++|+++|+.|+.++|..+...++..+       ..+..+++|++++++|.++..++++.  
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~--   77 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRAN--   77 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhC--
Confidence            5789999998 8999999999999999999999998877665533       25889999999999999999999873  


Q ss_pred             ccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .+|++|+|+||||..  .|.-+.+.+..+.+|+||++|+..+++++...+.+.+  |.|||++|.+++         
T Consensus        78 ---~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK--GtIVnvgSl~~~---------  143 (289)
T KOG1209|consen   78 ---PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK--GTIVNVGSLAGV---------  143 (289)
T ss_pred             ---CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc--ceEEEecceeEE---------
Confidence               679999999999987  4556888999999999999999999999997766654  999999999999         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE  282 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~  282 (369)
                                 .|+|..+.|.+||+|+.+|++.|+.|++   +.||+|..+-||.|.|++...
T Consensus       144 -----------vpfpf~~iYsAsKAAihay~~tLrlEl~---PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  144 -----------VPFPFGSIYSASKAAIHAYARTLRLELK---PFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             -----------eccchhhhhhHHHHHHHHhhhhcEEeee---ccccEEEEecccceecccccC
Confidence                       8899999999999999999999999998   999999999999999998654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=7.7e-32  Score=242.22  Aligned_cols=236  Identities=21%  Similarity=0.273  Sum_probs=194.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |+++||||++|||+++|++|+++|++|++++| +++..++..+++...  +.++.++.+|+++++++.++++++.+    
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~----   74 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEA----   74 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHH----
Confidence            68999999999999999999999999999988 655566555555433  45789999999999999999999988    


Q ss_pred             cCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        ..+++|++|||||...+  ..+.+.+.+++++++|+.+++.+++.++|.|++.+ .++||++||..+.          
T Consensus        75 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~----------  141 (242)
T TIGR01829        75 --ELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQ----------  141 (242)
T ss_pred             --HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc----------
Confidence              56889999999997633  44678899999999999999999999999998765 6899999998876          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhC
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  300 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  300 (369)
                                .+.++...|+++|+++..+++++++++.   ..+|++++++||++.|++.+...... ........+..+
T Consensus       142 ----------~~~~~~~~y~~sk~a~~~~~~~la~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~  207 (242)
T TIGR01829       142 ----------KGQFGQTNYSAAKAGMIGFTKALAQEGA---TKGVTVNTISPGYIATDMVMAMREDV-LNSIVAQIPVGR  207 (242)
T ss_pred             ----------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEeeCCCcCccccccchHH-HHHHHhcCCCCC
Confidence                      5566778899999999999999999987   78999999999999999876543321 111222345567


Q ss_pred             CCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          301 LQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      +.+|+++|+.+.+++... ...+|+.+..++|.
T Consensus       208 ~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       208 LGRPEEIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            889999999998655432 25689998888774

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=243.31  Aligned_cols=244  Identities=29%  Similarity=0.366  Sum_probs=192.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++++++||||+||||.++|++|+++|++|++. .|+.++.++..+++...  +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999998774 78877777766666443  35688999999999999999999987


Q ss_pred             HHhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                      .++.....+++|++|||||...+  ..+.+.+.++.++++|+.+++++++.++|.|.+   .+++|++||..+.      
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~------  151 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVR------  151 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhc------
Confidence            54221112579999999998643  346688999999999999999999999999865   3699999998877      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~  295 (369)
                                    .+.++...|++||++++.++++++.++.   +.++++++++||+++|++.+........ ......
T Consensus       152 --------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~  214 (254)
T PRK12746        152 --------------LGFTGSIAYGLSKGALNTMTLPLAKHLG---ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS  214 (254)
T ss_pred             --------------CCCCCCcchHhhHHHHHHHHHHHHHHHh---hcCcEEEEEEECCccCcchhhhccChhHHHHHHhc
Confidence                          5667788999999999999999999997   7899999999999999987653221111 111112


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  331 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g  331 (369)
                      .++++..+++|+|+.+.+++.... ..+|..|..++|
T Consensus       215 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        215 SVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             CCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            234567899999999986543322 346777776655

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-32  Score=246.29  Aligned_cols=216  Identities=26%  Similarity=0.345  Sum_probs=179.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++++||||+||||++++++|+++|++|++++|+.+..+.          ..+++++++|++|+++++++++.+.+   
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~---   69 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIA---   69 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHH---
Confidence            46899999999999999999999999999999998754321          23578999999999999999999988   


Q ss_pred             ccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .++++|++|||||+.  .+..+.+.+.+++++++|+.|++.+++.++|.|++++ .++||++||..+.         
T Consensus        70 ---~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~---------  136 (270)
T PRK06179         70 ---RAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGF---------  136 (270)
T ss_pred             ---hCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCcccc---------
Confidence               678999999999986  3445678899999999999999999999999998776 6899999999887         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH------HHH----
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF------LSL----  289 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~------~~~----  289 (369)
                                 .+.+....|++||++++.++++++.|++   +.||++++++||+++|++..+....      ...    
T Consensus       137 -----------~~~~~~~~Y~~sK~a~~~~~~~l~~el~---~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  202 (270)
T PRK06179        137 -----------LPAPYMALYAASKHAVEGYSESLDHEVR---QFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAV  202 (270)
T ss_pred             -----------CCCCCccHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHH
Confidence                       6667788999999999999999999998   7899999999999999987643210      000    


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcC
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~  317 (369)
                      .......+..+..+|+++|+.++.++..
T Consensus       203 ~~~~~~~~~~~~~~~~~va~~~~~~~~~  230 (270)
T PRK06179        203 VSKAVAKAVKKADAPEVVADTVVKAALG  230 (270)
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHHcC
Confidence            0011112334567999999999976544

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-31  Score=242.17  Aligned_cols=226  Identities=21%  Similarity=0.250  Sum_probs=184.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +..+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++++++.++++++.+ 
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   83 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEE-   83 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            356789999999999999999999999999999999988777776666543  34688999999999999999999887 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ..+++|++|||||...  +..+.+.+.+++++++|+.+++.+++.++|.|.+++ .++||++||..+.       
T Consensus        84 -----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~-------  150 (274)
T PRK07775         84 -----ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVAL-------  150 (274)
T ss_pred             -----hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhc-------
Confidence                 5678999999999863  344668899999999999999999999999987665 6899999998877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH--HHHHHHH-
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--SLMAFTV-  294 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~-  294 (369)
                                   .+.++...|++||++++.+++++++++.   ..||++++++||+++|++........  ....... 
T Consensus       151 -------------~~~~~~~~Y~~sK~a~~~l~~~~~~~~~---~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~  214 (274)
T PRK07775        151 -------------RQRPHMGAYGAAKAGLEAMVTNLQMELE---GTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK  214 (274)
T ss_pred             -------------CCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH
Confidence                         5556677899999999999999999997   78999999999999999754322111  1111001 


Q ss_pred             --HHHhhCCCCHHHHHHHHHHHhcC
Q 017580          295 --LKLLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       295 --~~~~~~~~~~~e~A~~v~~~~l~  317 (369)
                        ....+++.+++|+|+++++++..
T Consensus       215 ~~~~~~~~~~~~~dva~a~~~~~~~  239 (274)
T PRK07775        215 WGQARHDYFLRASDLARAITFVAET  239 (274)
T ss_pred             hcccccccccCHHHHHHHHHHHhcC
Confidence              11123578999999999966543

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-32  Score=241.68  Aligned_cols=218  Identities=26%  Similarity=0.350  Sum_probs=184.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++|+++||||++|||++++++|+++|++|++++|++++.+++.+++.+.  +.++.++.+|+++++++.++++++.+   
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---   79 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLE---   79 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHH---
Confidence            4689999999999999999999999999999999998887777777543  45788999999999999999999988   


Q ss_pred             ccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .++++|++|||||...  +..+.+.+.+++++++|+.+++.+++.++|.|.+++ .++||++||..+.         
T Consensus        80 ---~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~---------  146 (241)
T PRK07454         80 ---QFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAAR---------  146 (241)
T ss_pred             ---HcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhC---------
Confidence               6688999999999763  344668899999999999999999999999998765 6899999999877         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+.++...|++||++++.++++++.+++   +.||++++|+||+++|++.........       ....
T Consensus       147 -----------~~~~~~~~Y~~sK~~~~~~~~~~a~e~~---~~gi~v~~i~pg~i~t~~~~~~~~~~~-------~~~~  205 (241)
T PRK07454        147 -----------NAFPQWGAYCVSKAALAAFTKCLAEEER---SHGIRVCTITLGAVNTPLWDTETVQAD-------FDRS  205 (241)
T ss_pred             -----------cCCCCccHHHHHHHHHHHHHHHHHHHhh---hhCCEEEEEecCcccCCcccccccccc-------cccc
Confidence                       5666778999999999999999999997   789999999999999998653111000       0112


Q ss_pred             CCCCHHHHHHHHHHHhcCC
Q 017580          300 LLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~  318 (369)
                      +..+|+|+|+.+++++..+
T Consensus       206 ~~~~~~~va~~~~~l~~~~  224 (241)
T PRK07454        206 AMLSPEQVAQTILHLAQLP  224 (241)
T ss_pred             cCCCHHHHHHHHHHHHcCC
Confidence            4679999999999766544

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-31  Score=239.37  Aligned_cols=237  Identities=22%  Similarity=0.290  Sum_probs=190.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC----cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS----SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~----~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ++++++++||||+||||+++|++|+++|++|++++|.    .+..+++.+++...  +.++.++.+|+++++++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence            4568899999999999999999999999999997663    34445555555433  45789999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHh-HhhhcCCCCCeEEEEcCCccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~-~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      +.+      ..+++|++|||||...  +..+.+.+.+++.+++|+.+++.+++.+. |.+++++ .++||++||..+.  
T Consensus        81 ~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~--  151 (249)
T PRK12827         81 GVE------EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGV--  151 (249)
T ss_pred             HHH------HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhc--
Confidence            887      5678999999999864  34567889999999999999999999999 6665554 5799999998887  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                                        .+.++...|+.||++++.++++++.++.   +.+|++++++||+++|++.........   .
T Consensus       152 ------------------~~~~~~~~y~~sK~a~~~~~~~l~~~~~---~~~i~~~~i~pg~v~t~~~~~~~~~~~---~  207 (249)
T PRK12827        152 ------------------RGNRGQVNYAASKAGLIGLTKTLANELA---PRGITVNAVAPGAINTPMADNAAPTEH---L  207 (249)
T ss_pred             ------------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hhCcEEEEEEECCcCCCcccccchHHH---H
Confidence                              5566778899999999999999999987   789999999999999998765432211   1


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  331 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g  331 (369)
                      ....+..+..+++|+|+.+++++... ...+|+++..++|
T Consensus       208 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        208 LNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            11223445669999999999655332 3567888877765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=2.2e-31  Score=240.55  Aligned_cols=217  Identities=24%  Similarity=0.345  Sum_probs=177.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+||||.++|++|+++|++|++++|++++++++.+.+     +.++.++.+|+++.++++++++++.+      
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~------   70 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPA------   70 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHH------
Confidence            6899999999999999999999999999999988776665544     34688999999999999999999887      


Q ss_pred             CCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          145 MHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       145 ~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                      .++++|++|||||+.   .+..+.+.+.+++++++|+.|++.+++.++|.|++++ .++||++||..+.           
T Consensus        71 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-----------  138 (248)
T PRK10538         71 EWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGS-----------  138 (248)
T ss_pred             HcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccC-----------
Confidence            567899999999975   2445678999999999999999999999999998765 6899999998876           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc--chhHHHHHHHHHHHHhh
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE--VPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~  299 (369)
                               .+.++...|+.||++++++++.++.++.   +.+|++++|+||.+.|+....  ........  .......
T Consensus       139 ---------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~--~~~~~~~  204 (248)
T PRK10538        139 ---------WPYAGGNVYGATKAFVRQFSLNLRTDLH---GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA--EKTYQNT  204 (248)
T ss_pred             ---------CCCCCCchhHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCCeecccccchhhccCcHHHH--Hhhcccc
Confidence                     5667778999999999999999999997   789999999999998544322  11111000  0000112


Q ss_pred             CCCCHHHHHHHHHHHhcCC
Q 017580          300 LLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~  318 (369)
                      ...+|+|+|+.+++++..+
T Consensus       205 ~~~~~~dvA~~~~~l~~~~  223 (248)
T PRK10538        205 VALTPEDVSEAVWWVATLP  223 (248)
T ss_pred             CCCCHHHHHHHHHHHhcCC
Confidence            3569999999999776544

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=242.63  Aligned_cols=218  Identities=22%  Similarity=0.258  Sum_probs=181.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||+||||++++++|+++|++|++++|+.+.++++.+++.    +.+++++++|+++.+++.++++.+.+.    
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~----   73 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAA----   73 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHH----
Confidence            689999999999999999999999999999999888777766543    457899999999999999999988762    


Q ss_pred             CCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                       ..+++|++|||||...  +..+.+.+++++++++|+.+++.+++.+.|.|+.++ .++||++||..+.           
T Consensus        74 -~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-----------  140 (260)
T PRK08267         74 -TGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAI-----------  140 (260)
T ss_pred             -cCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhC-----------
Confidence             1578999999999864  344678899999999999999999999999998775 6899999998887           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                               .+.+....|+.||++++.++++++.++.   +.+|++++++||+++|++.+........   ......+..
T Consensus       141 ---------~~~~~~~~Y~~sKaa~~~~~~~l~~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~~---~~~~~~~~~  205 (260)
T PRK08267        141 ---------YGQPGLAVYSATKFAVRGLTEALDLEWR---RHGIRVADVMPLFVDTAMLDGTSNEVDA---GSTKRLGVR  205 (260)
T ss_pred             ---------cCCCCchhhHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCCcCCcccccccchhhh---hhHhhccCC
Confidence                     6667788999999999999999999997   7899999999999999987641111110   111122335


Q ss_pred             CCHHHHHHHHHHHhcC
Q 017580          302 QSPEKGINSVLDAALA  317 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~  317 (369)
                      .+|+++|+.++.++..
T Consensus       206 ~~~~~va~~~~~~~~~  221 (260)
T PRK08267        206 LTPEDVAEAVWAAVQH  221 (260)
T ss_pred             CCHHHHHHHHHHHHhC
Confidence            7899999999976643

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.8e-31  Score=239.28  Aligned_cols=239  Identities=22%  Similarity=0.271  Sum_probs=190.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++++++||||++|||++++++|+++|++|++..|+ .+........+...  +.++..+.+|+++++++.++++++.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999887764 34444444444433  44678899999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            ..+++|++|||||...  +..+.+.+.+++.+++|+.+++.+++.+.|.|++   .++||++||.++.      
T Consensus        81 ------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~------  145 (252)
T PRK06077         81 ------RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGI------  145 (252)
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhcc------
Confidence                  5678999999999853  3345678889999999999999999999999865   3799999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH---HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL---SLMAFT  293 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~---~~~~~~  293 (369)
                                    .+.++...|++||++++.+++++++|+.   + +|+++++.||+++|++........   ......
T Consensus       146 --------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~  207 (252)
T PRK06077        146 --------------RPAYGLSIYGAMKAAVINLTKYLALELA---P-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE  207 (252)
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---c-CCEEEEEeeCCccChHHHhhhhcccccHHHHHH
Confidence                          6778888999999999999999999996   4 899999999999999865432110   000111


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      ...+.+++.+|+|+|+.+++++. ....+|+.|+.++|..+
T Consensus       208 ~~~~~~~~~~~~dva~~~~~~~~-~~~~~g~~~~i~~g~~~  247 (252)
T PRK06077        208 KFTLMGKILDPEEVAEFVAAILK-IESITGQVFVLDSGESL  247 (252)
T ss_pred             hcCcCCCCCCHHHHHHHHHHHhC-ccccCCCeEEecCCeec
Confidence            11234467899999999997664 34456777877777665

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=7e-31  Score=236.90  Aligned_cols=241  Identities=21%  Similarity=0.239  Sum_probs=191.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++++++||||+||||++++++|+++|++|++++|+. +..+...+.+.... +..+.++.+|+++.+++.++++++.+ 
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~-   81 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVA-   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            4578999999999999999999999999999999864 44555555554332 34688999999999999999999888 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ..+++|++|||||...  +..+.+.+++++++++|+.|++.+++++.|.+.+++  +++++++|..+.       
T Consensus        82 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--~~~~~~~~~~~~-------  147 (249)
T PRK09135         82 -----AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR--GAIVNITDIHAE-------  147 (249)
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC--eEEEEEeChhhc-------
Confidence                 5688999999999753  334567788999999999999999999999987654  789988886554       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|+.||++++.++++++.++.    +++++++++||++.|++.+...............+
T Consensus       148 -------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~----~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~  210 (249)
T PRK09135        148 -------------RPLKGYPVYCAAKAALEMLTRSLALELA----PEVRVNAVAPGAILWPEDGNSFDEEARQAILARTP  210 (249)
T ss_pred             -------------CCCCCchhHHHHHHHHHHHHHHHHHHHC----CCCeEEEEEeccccCccccccCCHHHHHHHHhcCC
Confidence                         5667788999999999999999999984    47999999999999998653211111111112223


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          298 LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      +.+..+++|+|+++.+++...+..+|+.|..++|...
T Consensus       211 ~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        211 LKRIGTPEDIAEAVRFLLADASFITGQILAVDGGRSL  247 (249)
T ss_pred             cCCCcCHHHHHHHHHHHcCccccccCcEEEECCCeec
Confidence            4456789999999986665555668999988888764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.9e-31  Score=238.71  Aligned_cols=229  Identities=24%  Similarity=0.320  Sum_probs=189.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCC--ChHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS--SFQSVLKFKDSL  136 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls--~~~~i~~~~~~i  136 (369)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+.. ..++.++.+|++  ++++++++.+.+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999988888777776543 346677788886  789999999998


Q ss_pred             HHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      .+      .++++|++|||||...   +..+.+.+.+++.+++|+.+++.+++.++|.|.+++ .++||++||..+.   
T Consensus        87 ~~------~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~---  156 (247)
T PRK08945         87 EE------QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGR---  156 (247)
T ss_pred             HH------HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhc---
Confidence            87      5688999999999753   345678899999999999999999999999998776 6899999998877   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       .+.+....|++||++++.++++++.++.   ..+|++++++||+++|++........      
T Consensus       157 -----------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~~~~v~pg~v~t~~~~~~~~~~------  210 (247)
T PRK08945        157 -----------------QGRANWGAYAVSKFATEGMMQVLADEYQ---GTNLRVNCINPGGTRTAMRASAFPGE------  210 (247)
T ss_pred             -----------------CCCCCCcccHHHHHHHHHHHHHHHHHhc---ccCEEEEEEecCCccCcchhhhcCcc------
Confidence                             5667778999999999999999999997   78999999999999999754321110      


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEe
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFF  327 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~  327 (369)
                         ...++.+|+|+++.+++++.... ..+|+.+-
T Consensus       211 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  242 (247)
T PRK08945        211 ---DPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFD  242 (247)
T ss_pred             ---cccCCCCHHHHHHHHHHHhCccccccCCeEEe
Confidence               11256799999999997643222 45677764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=4.3e-31  Score=238.08  Aligned_cols=237  Identities=23%  Similarity=0.268  Sum_probs=188.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEE-EeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |+++||||+||||++++++|+++|++|++ ..|+.++.++...++...  +.++..+++|++|+++++++++++.+    
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~----   75 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQ----   75 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHH----
Confidence            58999999999999999999999999977 467777777777666543  45688899999999999999999987    


Q ss_pred             cCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccccC
Q 017580          143 SDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~~~~~~~~  217 (369)
                        .++++|++|||||...   +..+.+.+.++..+++|+.+++.+++.+++.|.++.  ..|+||++||..+.       
T Consensus        76 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~-------  146 (247)
T PRK09730         76 --HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR-------  146 (247)
T ss_pred             --hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-------
Confidence              6789999999999752   334678889999999999999999999999987652  24789999998776       


Q ss_pred             CCcccccccccccCCCch-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~-~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                   .+.+. ...|+++|++++.++++++.++.   +.+|++++++||++.|++.................
T Consensus       147 -------------~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~  210 (247)
T PRK09730        147 -------------LGAPGEYVDYAASKGAIDTLTTGLSLEVA---AQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNI  210 (247)
T ss_pred             -------------cCCCCcccchHhHHHHHHHHHHHHHHHHH---HhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcC
Confidence                         33333 35799999999999999999997   78999999999999999864322111111111223


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  331 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g  331 (369)
                      |+.+..+|+|+|+.+++++... ...+|.++..++|
T Consensus       211 ~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        211 PMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             CCCCCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence            4555679999999999655432 2467888877765

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-31  Score=242.34  Aligned_cols=234  Identities=21%  Similarity=0.262  Sum_probs=183.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .|+++||||+||||++++++|+++|++|++++|+.+.++++.++.     +.++.++++|++|.+++.++++++.+    
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~----   72 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFA----   72 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHH----
Confidence            378999999999999999999999999999999987665554432     34688999999999999999998877    


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        ..+++|++|||||...  +..+.+.+.+++.+++|+.+++.+++.++|.|++++ .++||++||..+.          
T Consensus        73 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~----------  139 (276)
T PRK06482         73 --ALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQ----------  139 (276)
T ss_pred             --HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccc----------
Confidence              5678999999999863  344667889999999999999999999999998765 6899999998876          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh------HH-----HH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS------FL-----SL  289 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~------~~-----~~  289 (369)
                                .+.++...|++||++++.++++++.++.   +.+|++++++||.+.|++......      ..     ..
T Consensus       140 ----------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  206 (276)
T PRK06482        140 ----------IAYPGFSLYHATKWGIEGFVEAVAQEVA---PFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDL  206 (276)
T ss_pred             ----------cCCCCCchhHHHHHHHHHHHHHHHHHhh---ccCcEEEEEeCCccccCCcccccccCCCccccchhhHHH
Confidence                      5567788999999999999999999997   789999999999999988543211      00     00


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  333 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~  333 (369)
                      .......+.....+|++++++++.++... . .+..|+.+.+..
T Consensus       207 ~~~~~~~~~~~~~d~~~~~~a~~~~~~~~-~-~~~~~~~g~~~~  248 (276)
T PRK06482        207 RRALADGSFAIPGDPQKMVQAMIASADQT-P-APRRLTLGSDAY  248 (276)
T ss_pred             HHHHhhccCCCCCCHHHHHHHHHHHHcCC-C-CCeEEecChHHH
Confidence            01111111122368999999999766433 2 234455454443

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-31  Score=238.74  Aligned_cols=234  Identities=24%  Similarity=0.269  Sum_probs=187.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++++||||++|||+++++.|+++|++|++++|+.++.++..++.       ...++.+|+++.+++.+++++    
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~----   74 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA----   74 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH----
Confidence            467899999999999999999999999999999999987665544332       246788999999988877664    


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                            .+++|++|||||...  +..+.+.+++++.+++|+.+++.+++++++.+.+++..++||++||..+.       
T Consensus        75 ------~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-------  141 (245)
T PRK07060         75 ------AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL-------  141 (245)
T ss_pred             ------hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc-------
Confidence                  367999999999863  33456889999999999999999999999998765434899999998877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~  296 (369)
                                   .+.+....|+.||++++.++++++.++.   +.+|++++++||++.|++.+.. .............
T Consensus       142 -------------~~~~~~~~y~~sK~a~~~~~~~~a~~~~---~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~  205 (245)
T PRK07060        142 -------------VGLPDHLAYCASKAALDAITRVLCVELG---PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI  205 (245)
T ss_pred             -------------CCCCCCcHhHHHHHHHHHHHHHHHHHHh---hhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC
Confidence                         5667778999999999999999999997   7799999999999999986532 1111111122223


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~  333 (369)
                      +.+++.+++|+|+.+++++.... ..+|+++..++|..
T Consensus       206 ~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK07060        206 PLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGYT  243 (245)
T ss_pred             CCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCcc
Confidence            55678899999999997654432 56799998887753

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-31  Score=241.93  Aligned_cols=215  Identities=24%  Similarity=0.306  Sum_probs=175.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||+||||++++++|+++|++|++++|+.++++...    .    ..+.++.+|+++.++++++++++.+     
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~-----   68 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEA-----   68 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHH-----
Confidence            68999999999999999999999999999999977654432    1    1367889999999999999999987     


Q ss_pred             CCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                       .++++|++|||||..  .+..+.+.+++++.+++|+.|++.+++.++|.|++.  .|+||++||..+.           
T Consensus        69 -~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~-----------  134 (274)
T PRK05693         69 -EHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGV-----------  134 (274)
T ss_pred             -hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCcccc-----------
Confidence             668899999999975  344567889999999999999999999999999765  3899999998887           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-----------HH-
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-----------SL-  289 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-----------~~-  289 (369)
                               .+.+....|++||++++.++++++.|++   +.||+|++++||+|+|++.+......           .. 
T Consensus       135 ---------~~~~~~~~Y~~sK~al~~~~~~l~~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  202 (274)
T PRK05693        135 ---------LVTPFAGAYCASKAAVHALSDALRLELA---PFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLR  202 (274)
T ss_pred             ---------CCCCCccHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEecCccccccccccccchhhcCCCCCccHHHH
Confidence                     5666778899999999999999999997   78999999999999999876431110           00 


Q ss_pred             HHHHHHH--HhhCCCCHHHHHHHHHHHhcC
Q 017580          290 MAFTVLK--LLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       290 ~~~~~~~--~~~~~~~~~e~A~~v~~~~l~  317 (369)
                      .......  ......+|+++|+.++.++..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        203 EHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            0000000  112346899999999987653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=6e-31  Score=237.64  Aligned_cols=243  Identities=26%  Similarity=0.316  Sum_probs=197.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|.+++.++++++.+ 
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   79 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVE-   79 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            356899999999999999999999999999999999988877777777554  34688999999999999999999987 


Q ss_pred             HhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ..+++|++|||||...+  ..+.+.+++++.+++|+.+++.+++.++|.|.+++ .++||++||..+.       
T Consensus        80 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~-------  146 (251)
T PRK12826         80 -----DFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGP-------  146 (251)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhh-------
Confidence                 56789999999998643  34678899999999999999999999999998765 6899999998764       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                  ..+.++...|++||++++.++++++.++.   ..+++++.++||.+.|+..+...............|
T Consensus       147 ------------~~~~~~~~~y~~sK~a~~~~~~~~~~~~~---~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~  211 (251)
T PRK12826        147 ------------RVGYPGLAHYAASKAGLVGFTRALALELA---ARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIP  211 (251)
T ss_pred             ------------ccCCCCccHHHHHHHHHHHHHHHHHHHHH---HcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCC
Confidence                        12445667899999999999999999987   789999999999999998765432211111222335


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~  333 (369)
                      .+++.+++|+|+.+++++.... ..+|+.+..++|..
T Consensus       212 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        212 LGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            5577899999999997654333 45788887776654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.3e-31  Score=237.24  Aligned_cols=219  Identities=23%  Similarity=0.368  Sum_probs=186.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|+++++++.++++++.+ 
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   80 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKN-   80 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999988888877777543  45789999999999999999999987 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||...  +..+.+.+.+++.+++|+.+++.+++.+.|.|.+++ .+++|++||..+.       
T Consensus        81 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~-------  147 (239)
T PRK07666         81 -----ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQ-------  147 (239)
T ss_pred             -----HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhc-------
Confidence                 5688999999999753  344678899999999999999999999999998765 6899999998887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|+.||+++..++++++.|++   +.+|++++|+||++.|++........        ..
T Consensus       148 -------------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~--------~~  203 (239)
T PRK07666        148 -------------KGAAVTSAYSASKFGVLGLTESLMQEVR---KHNIRVTALTPSTVATDMAVDLGLTD--------GN  203 (239)
T ss_pred             -------------cCCCCCcchHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCcccCcchhhccccc--------cC
Confidence                         6667778899999999999999999997   78999999999999999865431110        01


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC
Q 017580          298 LGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      ...+.+++|+|+.++.++..+
T Consensus       204 ~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        204 PDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             CCCCCCHHHHHHHHHHHHhCC
Confidence            124679999999999766543

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-31  Score=240.46  Aligned_cols=217  Identities=30%  Similarity=0.378  Sum_probs=183.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++++||||+||||.+++++|+++|++|++++|+++.++++..++.  . +.++.++.+|++|++++.++++.+.+  
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~~~D~~d~~~~~~~~~~~~~--   77 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP--Y-PGRHRWVVADLTSEAGREAVLARARE--   77 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh--c-CCceEEEEccCCCHHHHHHHHHHHHh--
Confidence            568999999999999999999999999999999999888887777762  2 45789999999999999999998864  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                           .+++|++|||||...  +..+.+.+.+++++++|+.|++.+++.++|+|.+++ .++||++||..+.        
T Consensus        78 -----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~--------  143 (263)
T PRK09072         78 -----MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGS--------  143 (263)
T ss_pred             -----cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhC--------
Confidence                 478999999999863  345678899999999999999999999999998775 6899999998877        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++...|++||+++.+++++++.++.   +.+|+|++++||+++|++........      .....
T Consensus       144 ------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~Pg~~~t~~~~~~~~~~------~~~~~  202 (263)
T PRK09072        144 ------------IGYPGYASYCASKFALRGFSEALRRELA---DTGVRVLYLAPRATRTAMNSEAVQAL------NRALG  202 (263)
T ss_pred             ------------cCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCcccccchhhhcccc------ccccc
Confidence                        5667788999999999999999999997   78999999999999999864321100      00011


Q ss_pred             hCCCCHHHHHHHHHHHhcC
Q 017580          299 GLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~  317 (369)
                      .+..+|+|+|+.+++++..
T Consensus       203 ~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        203 NAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             CCCCCHHHHHHHHHHHHhC
Confidence            2567999999999976654

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-31  Score=235.18  Aligned_cols=227  Identities=21%  Similarity=0.226  Sum_probs=182.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.      .    .   ...++.+|+++.++++++++++.+   
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~----~---~~~~~~~D~~~~~~~~~~~~~~~~---   65 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D----F---PGELFACDLADIEQTAATLAQINE---   65 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c----c---CceEEEeeCCCHHHHHHHHHHHHH---
Confidence            47899999999999999999999999999999998753      0    0   124789999999999999998876   


Q ss_pred             ccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .. ++|++|||||+..+  ..+.+.+++++++++|+.+++.+.+.++|.|++++ .++||++||...          
T Consensus        66 ---~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~----------  130 (234)
T PRK07577         66 ---IH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAI----------  130 (234)
T ss_pred             ---hC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccc----------
Confidence               33 68999999998643  34568899999999999999999999999998765 689999999753          


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH--HHHHHHHHHHH
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF--LSLMAFTVLKL  297 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~  297 (369)
                                 .+.+....|++||++++.++++++.|++   +.||++++|+||+++|++.+.....  ..........+
T Consensus       131 -----------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  196 (234)
T PRK07577        131 -----------FGALDRTSYSAAKSALVGCTRTWALELA---EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP  196 (234)
T ss_pred             -----------cCCCCchHHHHHHHHHHHHHHHHHHHHH---hhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC
Confidence                       2345567899999999999999999997   7899999999999999987643211  11111112234


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      +++..+|+|+|+.+++++... ...+|..+..++|..
T Consensus       197 ~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (234)
T PRK07577        197 MRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGGS  233 (234)
T ss_pred             CCCCcCHHHHHHHHHHHhCcccCCccceEEEecCCcc
Confidence            556679999999999766443 256788888776643

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.1e-30  Score=237.09  Aligned_cols=238  Identities=21%  Similarity=0.236  Sum_probs=192.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+++.    +.++.++++|+++.+++.++++++.+    
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~----   73 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAA----   73 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHH----
Confidence            5799999999999999999999999999999999888777766652    34688999999999999999998887    


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        +++++|++|||||...  +..+.+++.+++.+++|+.+++.+++++++.+.+++ .++||++||..+.          
T Consensus        74 --~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~----------  140 (257)
T PRK07074         74 --ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGM----------  140 (257)
T ss_pred             --HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc----------
Confidence              5678999999999864  344678899999999999999999999999998765 6899999997654          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHH-HHHHHHHh
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLM-AFTVLKLL  298 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~~-~~~~~~~~  298 (369)
                                . ..+...|+.||++++.++++++.++.   +.+|+|++++||+++|++....... .... ......+.
T Consensus       141 ----------~-~~~~~~y~~sK~a~~~~~~~~a~~~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  206 (257)
T PRK07074        141 ----------A-ALGHPAYSAAKAGLIHYTKLLAVEYG---RFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPL  206 (257)
T ss_pred             ----------C-CCCCcccHHHHHHHHHHHHHHHHHHh---HhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCC
Confidence                      1 12345799999999999999999997   7899999999999999986432111 1111 11112345


Q ss_pred             hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          299 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      .++.+++|+|+++++++... ...+|.++..++|....
T Consensus       207 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~  244 (257)
T PRK07074        207 QDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAG  244 (257)
T ss_pred             CCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcC
Confidence            67889999999999766432 35679999888876654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=3.8e-31  Score=234.30  Aligned_cols=226  Identities=23%  Similarity=0.218  Sum_probs=195.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      +.++|||+|+|||+++|+++..+|++|.++.|+.+++.+++++++-......+.+..+|+.|.+++...+++++.     
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~-----  108 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD-----  108 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh-----
Confidence            689999999999999999999999999999999999999999997665444588999999999999999999987     


Q ss_pred             CCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                       ..+++|.+|||||..  +-+.+.+++.++..|++|++|+++++++.+|.|++..+.|+|+.+||.++.           
T Consensus       109 -~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-----------  176 (331)
T KOG1210|consen  109 -LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-----------  176 (331)
T ss_pred             -ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-----------
Confidence             779999999999976  446688999999999999999999999999999988766899999999998           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                               .+..++++|++||+|+.+++.++++|+.   +.+|+|....|+.+.||.+.+-....+..- .........
T Consensus       177 ---------~~i~GysaYs~sK~alrgLa~~l~qE~i---~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t-~ii~g~ss~  243 (331)
T KOG1210|consen  177 ---------LGIYGYSAYSPSKFALRGLAEALRQELI---KYGVHVTLYYPPDTLTPGFERENKTKPEET-KIIEGGSSV  243 (331)
T ss_pred             ---------cCcccccccccHHHHHHHHHHHHHHHHh---hcceEEEEEcCCCCCCCccccccccCchhe-eeecCCCCC
Confidence                     8899999999999999999999999998   789999999999999997754211111110 011112235


Q ss_pred             CCHHHHHHHHHHHhcCCC
Q 017580          302 QSPEKGINSVLDAALAPP  319 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~~~  319 (369)
                      .++||+|.+++.-+...+
T Consensus       244 ~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  244 IKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             cCHHHHHHHHHhHHhhcC
Confidence            789999999998777766

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=2.6e-32  Score=220.37  Aligned_cols=236  Identities=19%  Similarity=0.262  Sum_probs=199.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +.+|-+++|||+.||+|++.|++|+++|+.|++.+...++.++..+++     +.++.+.+.|++++++++..+.+.+. 
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~-   79 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKA-   79 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHh-
Confidence            357889999999999999999999999999999999999999998888     78999999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccccC--------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-----CCCeEEEEcC
Q 017580          140 LLDSDMHSSIQLLINNAGILAT--------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNVTS  206 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~--------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~~g~IV~vsS  206 (369)
                           +++++|.+|||||+...        ....+.|++++.++||++|+|++++...-.|-+..     ..|.||+..|
T Consensus        80 -----kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintas  154 (260)
T KOG1199|consen   80 -----KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTAS  154 (260)
T ss_pred             -----hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeece
Confidence                 78999999999998632        12347899999999999999999999998887653     3578999999


Q ss_pred             CcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017580          207 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  286 (369)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~  286 (369)
                      .++.                    .+..+.++|++||.++.+++.-++++++   ..|||++.|.||.++||+....|..
T Consensus       155 vaaf--------------------dgq~gqaaysaskgaivgmtlpiardla---~~gir~~tiapglf~tpllsslpek  211 (260)
T KOG1199|consen  155 VAAF--------------------DGQTGQAAYSASKGAIVGMTLPIARDLA---GDGIRFNTIAPGLFDTPLLSSLPEK  211 (260)
T ss_pred             eeee--------------------cCccchhhhhcccCceEeeechhhhhcc---cCceEEEeecccccCChhhhhhhHH
Confidence            9988                    6778899999999999999999999998   8999999999999999999888765


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  330 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~  330 (369)
                      ...+.....+...|+.+|.|.|..+-. +...+.-+|+.+..++
T Consensus       212 v~~fla~~ipfpsrlg~p~eyahlvqa-iienp~lngevir~dg  254 (260)
T KOG1199|consen  212 VKSFLAQLIPFPSRLGHPHEYAHLVQA-IIENPYLNGEVIRFDG  254 (260)
T ss_pred             HHHHHHHhCCCchhcCChHHHHHHHHH-HHhCcccCCeEEEecc
Confidence            443322222222378899999987774 4444555677766554

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.98  E-value=9.7e-31  Score=235.55  Aligned_cols=209  Identities=22%  Similarity=0.276  Sum_probs=178.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||++|||.+++++|+++|++|++++|++++.+...+++... ++.++.++++|++++++++++++++.+     
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~-----   75 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA-----   75 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh-----
Confidence            68999999999999999999999999999999998887777776554 356899999999999999999888754     


Q ss_pred             CCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                          .+|++|||||....  ..+.+.+++++.+++|+.+++.+++.+.|.|.+++ .++||++||..+.           
T Consensus        76 ----~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-----------  139 (243)
T PRK07102         76 ----LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGD-----------  139 (243)
T ss_pred             ----cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEeccccc-----------
Confidence                36999999997633  34667888999999999999999999999998766 6899999998876           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                               .+.++...|++||+++.+++++++.|+.   +.||++++|+||+++|++......           +....
T Consensus       140 ---------~~~~~~~~Y~~sK~a~~~~~~~l~~el~---~~gi~v~~v~pg~v~t~~~~~~~~-----------~~~~~  196 (243)
T PRK07102        140 ---------RGRASNYVYGSAKAALTAFLSGLRNRLF---KSGVHVLTVKPGFVRTPMTAGLKL-----------PGPLT  196 (243)
T ss_pred             ---------CCCCCCcccHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCcccChhhhccCC-----------Ccccc
Confidence                     5566777899999999999999999997   789999999999999998654321           11245


Q ss_pred             CCHHHHHHHHHHHhcC
Q 017580          302 QSPEKGINSVLDAALA  317 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~  317 (369)
                      .+|+|+|+.+++.+..
T Consensus       197 ~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        197 AQPEEVAKDIFRAIEK  212 (243)
T ss_pred             CCHHHHHHHHHHHHhC
Confidence            7999999999976653

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.98  E-value=8.2e-31  Score=234.79  Aligned_cols=221  Identities=19%  Similarity=0.208  Sum_probs=173.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           64 PVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++||||++|||+++|++|+++|  ..|++..|+....          ..+.+++++++|+++.++++++.+       
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~~-------   63 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLSE-------   63 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHHH-------
Confidence            369999999999999999999985  5777777765321          114578899999999999887543       


Q ss_pred             ccCCCCCccEEEeccccccC--------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          142 DSDMHSSIQLLINNAGILAT--------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~--------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                         ..+++|++|||||+...        ..+.+.+.+++.+++|+.+++.+++.++|.|++++ .++|+++||..+... 
T Consensus        64 ---~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~-  138 (235)
T PRK09009         64 ---QFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSIS-  138 (235)
T ss_pred             ---hcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccc-
Confidence               35789999999998632        23567888999999999999999999999998765 589999998665311 


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                      ..+.+++..|++||++++.|+++|+.|+... ..+|+|++|+||+++|++.+...         
T Consensus       139 ----------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~-~~~i~v~~v~PG~v~t~~~~~~~---------  192 (235)
T PRK09009        139 ----------------DNRLGGWYSYRASKAALNMFLKTLSIEWQRS-LKHGVVLALHPGTTDTALSKPFQ---------  192 (235)
T ss_pred             ----------------cCCCCCcchhhhhHHHHHHHHHHHHHHhhcc-cCCeEEEEEcccceecCCCcchh---------
Confidence                            0234566799999999999999999998621 26999999999999999976422         


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      ...+.++..+|+|+|+.+++++.... ..+|.++..+++.
T Consensus       193 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        193 QNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGET  232 (235)
T ss_pred             hccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcC
Confidence            12244567899999999998776553 5689998766554

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=235.37  Aligned_cols=239  Identities=22%  Similarity=0.201  Sum_probs=184.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+ ..+.+.++++..  +.++.++++|++++++++++++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999864 455666666543  45688999999999999999999887


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                            .++++|++|||||.... ..   ..++..+++|+.+++.+++.+.|.|.+   .++||++||..+....     
T Consensus        81 ------~~~~~d~vi~~ag~~~~-~~---~~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~-----  142 (248)
T PRK07806         81 ------EFGGLDALVLNASGGME-SG---MDEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIP-----  142 (248)
T ss_pred             ------hCCCCcEEEECCCCCCC-CC---CCcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCc-----
Confidence                  56789999999986421 11   234678999999999999999999854   3799999996543100     


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHHHHHHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLSLMAFTVLK  296 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~  296 (369)
                      .          ..+.+....|+.||++++.++++++.|++   +.+|+|++|+||++.|++......  ..... .....
T Consensus       143 ~----------~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~---~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~-~~~~~  208 (248)
T PRK07806        143 T----------VKTMPEYEPVARSKRAGEDALRALRPELA---EKGIGFVVVSGDMIEGTVTATLLNRLNPGAI-EARRE  208 (248)
T ss_pred             c----------ccCCccccHHHHHHHHHHHHHHHHHHHhh---ccCeEEEEeCCccccCchhhhhhccCCHHHH-HHHHh
Confidence            0          01234467899999999999999999998   789999999999999987543211  00111 11234


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~  333 (369)
                      +.+++.+|+|+|+.+++++. .+..+|+.|..+++..
T Consensus       209 ~~~~~~~~~dva~~~~~l~~-~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        209 AAGKLYTVSEFAAEVARAVT-APVPSGHIEYVGGADY  244 (248)
T ss_pred             hhcccCCHHHHHHHHHHHhh-ccccCccEEEecCccc
Confidence            66788999999999997665 4456788887777654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.98  E-value=3.9e-30  Score=231.71  Aligned_cols=239  Identities=29%  Similarity=0.366  Sum_probs=193.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++++++||||+|+||.+++++|+++|++|+++.|+.+ ..+...++++..  +.++..+.+|+++.+++.++++++.+ 
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   79 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA-   79 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            56789999999999999999999999999988887754 355555555433  46788999999999999999999887 


Q ss_pred             HhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||....  ..+.+.+.+++.+++|+.+++.+.+.+.|.+.+.+ .+++|++||..+.       
T Consensus        80 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~-------  146 (248)
T PRK05557         80 -----EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGL-------  146 (248)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccC-------
Confidence                 56789999999998643  34668899999999999999999999999997765 5799999998776       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|+++|++++.+++++++++.   ..++++++++||+++|++.+....... .......+
T Consensus       147 -------------~~~~~~~~y~~sk~a~~~~~~~~a~~~~---~~~i~~~~v~pg~~~~~~~~~~~~~~~-~~~~~~~~  209 (248)
T PRK05557        147 -------------MGNPGQANYAASKAGVIGFTKSLARELA---SRGITVNAVAPGFIETDMTDALPEDVK-EAILAQIP  209 (248)
T ss_pred             -------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEecCccCCccccccChHHH-HHHHhcCC
Confidence                         5566778899999999999999999987   789999999999999998765432211 11122234


Q ss_pred             hhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~  332 (369)
                      .+++.+++|+|+.+.+++.. ....+|+.+..++|.
T Consensus       210 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        210 LGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence            45678999999999865443 235678888877664

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=232.65  Aligned_cols=224  Identities=19%  Similarity=0.228  Sum_probs=179.4

Q ss_pred             EEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCCC
Q 017580           67 IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH  146 (369)
Q Consensus        67 lITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~~  146 (369)
                      +||||++|||++++++|+++|++|++++|+.++++...++++.   +.+++++.+|+++++++.+++++          .
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----------~   67 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----------A   67 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----------c
Confidence            6999999999999999999999999999998877776666642   45688999999999999887764          3


Q ss_pred             CCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          147 SSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       147 ~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                      +++|++|||||...  +..+.+.+.+++++++|+.+++.+++  .+.+.+   .|+||++||.++.              
T Consensus        68 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~---~g~iv~~ss~~~~--------------  128 (230)
T PRK07041         68 GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP---GGSLTFVSGFAAV--------------  128 (230)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC---CeEEEEECchhhc--------------
Confidence            67999999999863  34567889999999999999999999  445532   4899999999887              


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH--HH-HHHHHHHHhhCC
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--SL-MAFTVLKLLGLL  301 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~--~~-~~~~~~~~~~~~  301 (369)
                            .+.++...|++||+++++++++++.|+.     +|++++++||+++|++........  .. .......+.++.
T Consensus       129 ------~~~~~~~~Y~~sK~a~~~~~~~la~e~~-----~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (230)
T PRK07041        129 ------RPSASGVLQGAINAALEALARGLALELA-----PVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRV  197 (230)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHHHhh-----CceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCC
Confidence                  6677888999999999999999999985     399999999999999865432211  11 111112244567


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          302 QSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      .+|+|+|+.+++++. ....+|+.+..++|..+
T Consensus       198 ~~~~dva~~~~~l~~-~~~~~G~~~~v~gg~~~  229 (230)
T PRK07041        198 GQPEDVANAILFLAA-NGFTTGSTVLVDGGHAI  229 (230)
T ss_pred             cCHHHHHHHHHHHhc-CCCcCCcEEEeCCCeec
Confidence            899999999997654 34567888888877654

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-30  Score=234.54  Aligned_cols=241  Identities=27%  Similarity=0.323  Sum_probs=193.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++++||||+||||++++++|+++|++|++++|+.+..+++.++..    +.++.++.+|+++++++.++++++.+ 
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVE-   82 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            4678999999999999999999999999999999999877666554442    22678999999999999999999987 


Q ss_pred             HhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           ..+++|++|||||...   +....+.+.+++++++|+.+++.+++.+++.+...+.+++|+++||.++.      
T Consensus        83 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~------  151 (264)
T PRK12829         83 -----RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR------  151 (264)
T ss_pred             -----HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc------
Confidence                 5678999999999862   23467889999999999999999999999998776523789999998776      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----------
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----------  286 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~----------  286 (369)
                                    .+.+....|+.+|++++.+++.++.++.   ..++++++++||++.|++.......          
T Consensus       152 --------------~~~~~~~~y~~~K~a~~~~~~~l~~~~~---~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~  214 (264)
T PRK12829        152 --------------LGYPGRTPYAASKWAVVGLVKSLAIELG---PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLD  214 (264)
T ss_pred             --------------cCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCCcCChHHHHHhhhhhhccCCChh
Confidence                          5667777899999999999999999987   6899999999999999986543211          


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ..........+.+++.+++|+|+.++.++... ...+|+++..++|..
T Consensus       215 ~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        215 EMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence            00011111123446789999999998665432 355788888887754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-30  Score=237.51  Aligned_cols=221  Identities=27%  Similarity=0.329  Sum_probs=182.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +++++||||+||||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.+    
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~----   74 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVA----   74 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH----
Confidence            368999999999999999999999999999999988887777777554  45788999999999999999999987    


Q ss_pred             cCCCCCccEEEecccccc--CCCCC-CHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRL-TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                        .++++|++|||||...  +..+. +.+.+++.+++|+.+++.+++.+.|.|.+..  ++||++||..+.         
T Consensus        75 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~iv~~sS~~~~---------  141 (263)
T PRK06181         75 --RFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR--GQIVVVSSLAGL---------  141 (263)
T ss_pred             --HcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CEEEEEeccccc---------
Confidence              5688999999999753  23455 7888999999999999999999999987654  899999998877         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+.++...|+.||++++.++++++.++.   +.+|+++++.||++.|++.+..................
T Consensus       142 -----------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  207 (263)
T PRK06181        142 -----------TGVPTRSGYAASKHALHGFFDSLRIELA---DDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQES  207 (263)
T ss_pred             -----------CCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCceEEEEecCccccCcchhhcccccccccccccccc
Confidence                       5667778999999999999999999997   78999999999999999876432111000000000112


Q ss_pred             CCCCHHHHHHHHHHHhc
Q 017580          300 LLQSPEKGINSVLDAAL  316 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l  316 (369)
                      ++.+|+|+|+.+++++.
T Consensus       208 ~~~~~~dva~~i~~~~~  224 (263)
T PRK06181        208 KIMSAEECAEAILPAIA  224 (263)
T ss_pred             CCCCHHHHHHHHHHHhh
Confidence            57899999999997664

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.8e-30  Score=254.43  Aligned_cols=236  Identities=22%  Similarity=0.263  Sum_probs=188.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc--hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++++++||||++|||+++|++|+++|++|++++|...  .+++..+++       ....+.+|+++.++++++++.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-------~~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-------GGTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-------CCeEEEEeCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999988532  233322221       23578999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|++|||||+..  +..+.+.+.++.++++|+.+++++++.+.|.+..++ .++||++||.++.     
T Consensus       280 ~------~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~g~iv~~SS~~~~-----  347 (450)
T PRK08261        280 E------RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-GGRIVGVSSISGI-----  347 (450)
T ss_pred             H------hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-CCEEEEECChhhc-----
Confidence            7      6688999999999863  345678999999999999999999999999655444 5899999999887     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||+++++|+++++.+++   ..+|++++|+||+++|++....+...... ....
T Consensus       348 ---------------~g~~~~~~Y~asKaal~~~~~~la~el~---~~gi~v~~v~PG~i~t~~~~~~~~~~~~~-~~~~  408 (450)
T PRK08261        348 ---------------AGNRGQTNYAASKAGVIGLVQALAPLLA---ERGITINAVAPGFIETQMTAAIPFATREA-GRRM  408 (450)
T ss_pred             ---------------CCCCCChHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEEeCcCcchhhhccchhHHHH-Hhhc
Confidence                           5667788999999999999999999997   78999999999999999987654321111 1122


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .++.+..+|+|+|+++++++... ...+|+.+..+++..
T Consensus       409 ~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~~~  447 (450)
T PRK08261        409 NSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQSL  447 (450)
T ss_pred             CCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence            34556679999999999654321 256789888776543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=4e-30  Score=262.99  Aligned_cols=246  Identities=21%  Similarity=0.231  Sum_probs=202.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ....+.||+++||||+||||++++++|+++|++|++++|+.+.++.+.+++...   .++.++.+|+++++++.++++++
T Consensus       416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~  492 (681)
T PRK08324        416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEA  492 (681)
T ss_pred             CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHH
Confidence            344578999999999999999999999999999999999998888777766443   47889999999999999999998


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|++|||||+..  +..+.+.+.++..+++|+.|++.+++.+.|.|++++.+|+||++||..+.    
T Consensus       493 ~~------~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~----  562 (681)
T PRK08324        493 AL------AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV----  562 (681)
T ss_pred             HH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc----
Confidence            87      6688999999999863  44567899999999999999999999999999886534899999998887    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc--cCCccccchhH------
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV--KTNIMREVPSF------  286 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v--~T~~~~~~~~~------  286 (369)
                                      .+.++...|++||++++.++++++.++.   +.+|+|++|+||.|  .|++.......      
T Consensus       563 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~  623 (681)
T PRK08324        563 ----------------NPGPNFGAYGAAKAAELHLVRQLALELG---PDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAY  623 (681)
T ss_pred             ----------------CCCCCcHHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeCceeecCCccccchhhhhhhhhc
Confidence                            6667788999999999999999999997   78999999999999  88875431100      


Q ss_pred             ----HH-HHHHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          287 ----LS-LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       287 ----~~-~~~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                          .. ........++++..+++|+|+++++++.. ....+|+.+..++|...
T Consensus       624 g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        624 GLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             cCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence                00 00122223455678999999999976532 34668999988888664

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=6.8e-30  Score=230.14  Aligned_cols=242  Identities=24%  Similarity=0.322  Sum_probs=195.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++.|+++||||+|+||++++++|+++|++|+++.|+.+ ..+...+.+...  +.+++++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHH
Confidence            355689999999999999999999999999888766544 344444454433  45688999999999999999999887


Q ss_pred             HHhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            ..+++|++||+||...+  ..+.+.+.+++.+++|+.+++.+++.+.|.+++.+ .+++|++||..+.      
T Consensus        81 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~------  147 (249)
T PRK12825         81 ------RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGL------  147 (249)
T ss_pred             ------HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccC------
Confidence                  45789999999997633  33568899999999999999999999999998776 6899999998877      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|+.||+++..+++.+++++.   ..++++++++||.+.|++............ ....
T Consensus       148 --------------~~~~~~~~y~~sK~~~~~~~~~~~~~~~---~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~-~~~~  209 (249)
T PRK12825        148 --------------PGWPGRSNYAAAKAGLVGLTKALARELA---EYGITVNMVAPGDIDTDMKEATIEEAREAK-DAET  209 (249)
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEECCccCCccccccchhHHhh-hccC
Confidence                          5566778999999999999999999987   679999999999999998765432221111 1123


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  334 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~  334 (369)
                      +.+++.+++|+|+.+.+++.... ..+|++|..++|..+
T Consensus       210 ~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        210 PLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            55667899999999997664332 567999998887654

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-30  Score=232.55  Aligned_cols=220  Identities=27%  Similarity=0.352  Sum_probs=175.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH-HHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS-LQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~-i~~~~~~~  143 (369)
                      +++||||+||||++++++|+++|++|++++|+.+..  .    .. ..+.++.++++|+++.+++++++++ +.+.+.  
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~--   73 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFV--   73 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc--
Confidence            699999999999999999999999999999986531  1    11 1245788999999999999997776 444221  


Q ss_pred             CCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          144 DMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                       ..+++|++|||||...   +..+.+.+.+++.+++|+.+++.+++.++|.|.+++ .++||++||..+.          
T Consensus        74 -~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~----------  141 (243)
T PRK07023         74 -DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAAR----------  141 (243)
T ss_pred             -cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhc----------
Confidence             2357999999999863   344678899999999999999999999999998765 6899999998877          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHHHHHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAFTVL  295 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~~~  295 (369)
                                .+.++...|++||++++++++.++.+ .   ..+|++++|+||+++|++......     ..........
T Consensus       142 ----------~~~~~~~~Y~~sK~a~~~~~~~~~~~-~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  207 (243)
T PRK07023        142 ----------NAYAGWSVYCATKAALDHHARAVALD-A---NRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFREL  207 (243)
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHhc-C---CCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHh
Confidence                      67778889999999999999999999 5   789999999999999998643211     1111122334


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      .+.++..+|+|+|+.++..++.++
T Consensus       208 ~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        208 KASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             hhcCCCCCHHHHHHHHHHHHhccc
Confidence            456788899999997775554443

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=8e-30  Score=229.36  Aligned_cols=240  Identities=25%  Similarity=0.358  Sum_probs=197.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++.+++++||||+++||.+++++|+++|++|++++|++++.+....++...  +.++.++.+|+++++++.++++++.+ 
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVE-   78 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            356789999999999999999999999999999999998887777776544  45788999999999999999999887 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ..+++|++||+||...  +..+.+.+.+++.+++|+.+++.+++.+.|.|.+.+ .++||++||..+.       
T Consensus        79 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~-------  145 (246)
T PRK05653         79 -----AFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGV-------  145 (246)
T ss_pred             -----HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhc-------
Confidence                 4578999999999763  345678899999999999999999999999997765 5799999998776       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|+.+|++++.+++++++++.   +.++++++++||.+.|++......... .......+
T Consensus       146 -------------~~~~~~~~y~~sk~~~~~~~~~l~~~~~---~~~i~~~~i~pg~~~~~~~~~~~~~~~-~~~~~~~~  208 (246)
T PRK05653        146 -------------TGNPGQTNYSAAKAGVIGFTKALALELA---SRGITVNAVAPGFIDTDMTEGLPEEVK-AEILKEIP  208 (246)
T ss_pred             -------------cCCCCCcHhHhHHHHHHHHHHHHHHHHh---hcCeEEEEEEeCCcCCcchhhhhHHHH-HHHHhcCC
Confidence                         4556677899999999999999999987   789999999999999998764322111 11112233


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .+.+.+++|+|+.+.+++... ...+|.++..++|.
T Consensus       209 ~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        209 LGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            456789999999999766443 25578898888775

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=7.2e-30  Score=230.90  Aligned_cols=219  Identities=33%  Similarity=0.430  Sum_probs=176.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch--HHHHHHHHHhhcCC-CcEEEEEecCCC-hHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL--LSETMADITSRNKD-ARLEAFQVDLSS-FQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~--~~~~~~~~~~~~~~-~~v~~~~~Dls~-~~~i~~~~~~  135 (369)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+.+.  .+.+.+...  ..+ ..+.+..+|+++ .++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999988888664  444444443  112 468888999998 9999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      +.+      .++++|++|||||+..   +..+.+.+++++++++|+.+++.+++.+.|.+++   . +||++||..+. .
T Consensus        80 ~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~-~Iv~isS~~~~-~  148 (251)
T COG1028          80 AEE------EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---Q-RIVNISSVAGL-G  148 (251)
T ss_pred             HHH------HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---C-eEEEECCchhc-C
Confidence            998      6788999999999974   5668889999999999999999999988888883   3 99999999875 2


Q ss_pred             ccccCCCcccccccccccCCCch-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH--
Q 017580          213 FNAQVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL--  289 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~--  289 (369)
                                          .++ ..+|++||+|+.+|+++++.|+.   +.||++++|+||+++|++.+........  
T Consensus       149 --------------------~~~~~~~Y~~sK~al~~~~~~l~~e~~---~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~  205 (251)
T COG1028         149 --------------------GPPGQAAYAASKAALIGLTKALALELA---PRGIRVNAVAPGYIDTPMTAALESAELEAL  205 (251)
T ss_pred             --------------------CCCCcchHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEEeccCCCcchhhhhhhhhhHH
Confidence                                222 57999999999999999999987   7899999999999999998764332200  


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHH
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDA  314 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~  314 (369)
                      .......+..+...|++++..+.++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~  230 (251)
T COG1028         206 KRLAARIPLGRLGTPEEVAAAVAFL  230 (251)
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            0000000333677899999988843

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=7.8e-30  Score=230.99  Aligned_cols=239  Identities=21%  Similarity=0.242  Sum_probs=193.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||+|+||++++++|+++|++|++++|+.+..+++.+++...  +.++..+.+|+++.+++.++++++.+    
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~----   74 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAA----   74 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH----
Confidence            468999999999999999999999999999999988877777766543  45789999999999999999999987    


Q ss_pred             cCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        ..+++|++|||||....  ..+.+++++++++++|+.+++.+++.++|.|++.+ .+++|++||..+.          
T Consensus        75 --~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~----------  141 (255)
T TIGR01963        75 --EFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGL----------  141 (255)
T ss_pred             --hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhc----------
Confidence              56789999999998643  34567889999999999999999999999997765 5799999998776          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH--------HHH--
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--------SLM--  290 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~--------~~~--  290 (369)
                                .+.+....|+.+|++++.++++++.++.   ..+|++++++||++.|++.+......        ...  
T Consensus       142 ----------~~~~~~~~y~~sk~a~~~~~~~~~~~~~---~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~  208 (255)
T TIGR01963       142 ----------VASPFKSAYVAAKHGLIGLTKVLALEVA---AHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIR  208 (255)
T ss_pred             ----------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHH
Confidence                      5566778999999999999999999987   67999999999999999754321100        000  


Q ss_pred             -HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          291 -AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       291 -~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                       ......+.+.+.+++|+|+++++++... ...+|++|..++|..
T Consensus       209 ~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       209 EVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence             0001112235789999999999776553 355788888877654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-30  Score=264.84  Aligned_cols=217  Identities=26%  Similarity=0.334  Sum_probs=185.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...  +.++.++.+|++|.++++++++++.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888888887654  45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccccCC--CCC--CHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATS--SRL--TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~--~~~--~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                            .++++|++|||||+....  .+.  +.+++++++++|+.|++.+++.++|.|++++ .|+||++||.++.    
T Consensus       445 ------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~----  513 (657)
T PRK07201        445 ------EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQ----  513 (657)
T ss_pred             ------hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhc----
Confidence                  678999999999975321  122  2578999999999999999999999998776 6899999999887    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.+..+.|++||+++++++++++.|+.   +.+|+|++|+||+|+|++.......        
T Consensus       514 ----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~pg~v~T~~~~~~~~~--------  566 (657)
T PRK07201        514 ----------------TNAPRFSAYVASKAALDAFSDVAASETL---SDGITFTTIHMPLVRTPMIAPTKRY--------  566 (657)
T ss_pred             ----------------CCCCCcchHHHHHHHHHHHHHHHHHHHH---hhCCcEEEEECCcCcccccCccccc--------
Confidence                            5667788999999999999999999997   7899999999999999997642110        


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~  317 (369)
                        ......+|+++|+.++..+..
T Consensus       567 --~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        567 --NNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             --cCCCCCCHHHHHHHHHHHHHh
Confidence              011356999999999976654

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-30  Score=232.66  Aligned_cols=202  Identities=22%  Similarity=0.311  Sum_probs=168.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++++||||++|||++++++|+++|++|++++|++++++++.+.      ..++.++++|+++.++++++++++.      
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~------   69 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKAALSQLP------   69 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHHHHHhcc------
Confidence            6899999999999999999999999999999998766554432      2467889999999999999888653      


Q ss_pred             CCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                         ..+|++|||||...  +..+.+.+.+++++++|+.|++++++.+.|.|.+   .++||++||..+.           
T Consensus        70 ---~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~-----------  132 (240)
T PRK06101         70 ---FIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASE-----------  132 (240)
T ss_pred             ---cCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhc-----------
Confidence               24799999999653  2335688999999999999999999999999854   3689999998877           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                               .+.++...|++||+++++++++++.|+.   ..+|++++++||+++|++.......           ....
T Consensus       133 ---------~~~~~~~~Y~asK~a~~~~~~~l~~e~~---~~gi~v~~v~pg~i~t~~~~~~~~~-----------~~~~  189 (240)
T PRK06101        133 ---------LALPRAEAYGASKAAVAYFARTLQLDLR---PKGIEVVTVFPGFVATPLTDKNTFA-----------MPMI  189 (240)
T ss_pred             ---------cCCCCCchhhHHHHHHHHHHHHHHHHHH---hcCceEEEEeCCcCCCCCcCCCCCC-----------CCcc
Confidence                     6667788999999999999999999997   7899999999999999987643211           0123


Q ss_pred             CCHHHHHHHHHHHhcC
Q 017580          302 QSPEKGINSVLDAALA  317 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~  317 (369)
                      .+|+++|+.++..+..
T Consensus       190 ~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        190 ITVEQASQEIRAQLAR  205 (240)
T ss_pred             cCHHHHHHHHHHHHhc
Confidence            5999999999976544

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.1e-30  Score=226.95  Aligned_cols=218  Identities=21%  Similarity=0.260  Sum_probs=175.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||++|||.+++++|+++|++|++++|+++..+++. +      ..++.++.+|++|+++++++++.+.+     
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~------~~~~~~~~~D~~d~~~~~~~~~~~~~-----   69 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-A------LPGVHIEKLDMNDPASLDQLLQRLQG-----   69 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-h------ccccceEEcCCCCHHHHHHHHHHhhc-----
Confidence            68999999999999999999999999999999987655432 1      12567889999999999999887753     


Q ss_pred             CCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          144 DMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         +++|++|||||+..    +..+.+.+++++.+++|+.+++.+++.++|.+++.  .++|+++||..+....      
T Consensus        70 ---~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~------  138 (225)
T PRK08177         70 ---QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVEL------  138 (225)
T ss_pred             ---CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCcccccc------
Confidence               57999999999863    23467889999999999999999999999999754  3799999997765210      


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+......|++||++++.++++++.|+.   +++|+|++|+||+++|++.+...               
T Consensus       139 -----------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~i~v~~i~PG~i~t~~~~~~~---------------  189 (225)
T PRK08177        139 -----------PDGGEMPLYKASKAALNSMTRSFVAELG---EPTLTVLSMHPGWVKTDMGGDNA---------------  189 (225)
T ss_pred             -----------CCCCCccchHHHHHHHHHHHHHHHHHhh---cCCeEEEEEcCCceecCCCCCCC---------------
Confidence                       2233456799999999999999999998   78999999999999999975421               


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          300 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                       ..++++.++.++..+.......|..++...|+++
T Consensus       190 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (225)
T PRK08177        190 -PLDVETSVKGLVEQIEAASGKGGHRFIDYQGETL  223 (225)
T ss_pred             -CCCHHHHHHHHHHHHHhCCccCCCceeCcCCcCC
Confidence             1377888888887765555545555555555544

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=226.24  Aligned_cols=231  Identities=24%  Similarity=0.256  Sum_probs=191.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.++.++..+++..    ..+..+.+|++|.+++.++++++.+ 
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEVNR-   78 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHHHH-
Confidence            36789999999999999999999999999999999998877666655543    2456788999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++||+||...  +..+.+.+.+++.+++|+.+++.++++++|.+.+++ .++||++||..+.       
T Consensus        79 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~-------  145 (239)
T PRK12828         79 -----QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAAL-------  145 (239)
T ss_pred             -----HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhc-------
Confidence                 5688999999999753  234568899999999999999999999999998765 6899999998877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.+....|+++|+++..++++++.++.   ..+|+++.+.||++.|++.+.....         ..
T Consensus       146 -------------~~~~~~~~y~~sk~a~~~~~~~~a~~~~---~~~i~~~~i~pg~v~~~~~~~~~~~---------~~  200 (239)
T PRK12828        146 -------------KAGPGMGAYAAAKAGVARLTEALAAELL---DRGITVNAVLPSIIDTPPNRADMPD---------AD  200 (239)
T ss_pred             -------------cCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcccCcchhhcCCc---------hh
Confidence                         5566778999999999999999999986   7899999999999999965432111         11


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~  333 (369)
                      +..+.+++|+|+.+++++.... ..+|+.+..++|..
T Consensus       201 ~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        201 FSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             hhcCCCHHHHHHHHHHHhCcccccccceEEEecCCEe
Confidence            2346789999999997665432 45789998887753

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5e-29  Score=223.36  Aligned_cols=216  Identities=29%  Similarity=0.418  Sum_probs=182.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.+++++||||+|+||.+++++|+++|++|++++|+++++++..+++...   .+++++++|+++.+++.++++++.+  
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~--   78 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVA--   78 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHH--
Confidence            56899999999999999999999999999999999998888777776542   4688999999999999999999887  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|++|||||...  +..+.+.+.+++++++|+.+++.+++++++.|++.  .++||++||..+.        
T Consensus        79 ----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~--------  144 (237)
T PRK07326         79 ----AFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG--GGYIINISSLAGT--------  144 (237)
T ss_pred             ----HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC--CeEEEEECChhhc--------
Confidence                5678999999999763  34567889999999999999999999999998443  4899999998876        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.+....|++||+++.++++.++.+++   ..++++++++||++.|++....+...          .
T Consensus       145 ------------~~~~~~~~y~~sk~a~~~~~~~~~~~~~---~~gi~v~~v~pg~~~t~~~~~~~~~~----------~  199 (237)
T PRK07326        145 ------------NFFAGGAAYNASKFGLVGFSEAAMLDLR---QYGIKVSTIMPGSVATHFNGHTPSEK----------D  199 (237)
T ss_pred             ------------cCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeeccccCcccccccchh----------h
Confidence                        4556677899999999999999999997   78999999999999999865533211          0


Q ss_pred             hCCCCHHHHHHHHHHHhcCCCC
Q 017580          299 GLLQSPEKGINSVLDAALAPPE  320 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~~  320 (369)
                      ....+++|+|+.+++++..+..
T Consensus       200 ~~~~~~~d~a~~~~~~l~~~~~  221 (237)
T PRK07326        200 AWKIQPEDIAQLVLDLLKMPPR  221 (237)
T ss_pred             hccCCHHHHHHHHHHHHhCCcc
Confidence            1236999999999987766653

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=220.89  Aligned_cols=194  Identities=16%  Similarity=0.188  Sum_probs=160.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||++|||++++++|+++ ++|++++|+..                   .+++|+++++++++++++         
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~---------   52 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK---------   52 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh---------
Confidence            6999999999999999999999 99999999753                   368999999999888763         


Q ss_pred             CCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          145 MHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                       .+++|++|||||...  +..+.+.+++++.+++|+.+++++++.+.|+|++   .|+|+++||..+.            
T Consensus        53 -~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~------------  116 (199)
T PRK07578         53 -VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSD------------  116 (199)
T ss_pred             -cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccC------------
Confidence             367999999999753  3446788999999999999999999999999975   3799999998887            


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCC
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ  302 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  302 (369)
                              .+.++...|++||+++++|+++++.|+    +.+|+|++|+||+++|++.....          ..+.....
T Consensus       117 --------~~~~~~~~Y~~sK~a~~~~~~~la~e~----~~gi~v~~i~Pg~v~t~~~~~~~----------~~~~~~~~  174 (199)
T PRK07578        117 --------EPIPGGASAATVNGALEGFVKAAALEL----PRGIRINVVSPTVLTESLEKYGP----------FFPGFEPV  174 (199)
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHHc----cCCeEEEEEcCCcccCchhhhhh----------cCCCCCCC
Confidence                    667888899999999999999999998    46899999999999998742110          01122457


Q ss_pred             CHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          303 SPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       303 ~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      +|+|+|+.++.++  ....+|+.+.
T Consensus       175 ~~~~~a~~~~~~~--~~~~~g~~~~  197 (199)
T PRK07578        175 PAARVALAYVRSV--EGAQTGEVYK  197 (199)
T ss_pred             CHHHHHHHHHHHh--ccceeeEEec
Confidence            9999999988554  2345565553

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=5.8e-29  Score=222.99  Aligned_cols=233  Identities=27%  Similarity=0.378  Sum_probs=187.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      ++|||++++||.+++++|+++|++|++++|+. +..+...+.++..  +.+++++.+|++++++++++++++.+      
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~------   72 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEE------   72 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH------
Confidence            58999999999999999999999999999875 4555555555443  45688999999999999999999887      


Q ss_pred             CCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          145 MHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                      ..+++|++|||||....  ..+.+.+.+++.+++|+.+++.+++.+.+.+.+.+ .+++|++||.++.            
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~------------  139 (239)
T TIGR01830        73 ELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGL------------  139 (239)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCcccc------------
Confidence            56889999999998643  34567889999999999999999999999987654 5799999998877            


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCC
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ  302 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  302 (369)
                              .+.+....|+++|++++.++++++.++.   ..++++++++||+++|++....+... ........+.++..
T Consensus       140 --------~g~~~~~~y~~~k~a~~~~~~~l~~~~~---~~g~~~~~i~pg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  207 (239)
T TIGR01830       140 --------MGNAGQANYAASKAGVIGFTKSLAKELA---SRNITVNAVAPGFIDTDMTDKLSEKV-KKKILSQIPLGRFG  207 (239)
T ss_pred             --------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEECCCCChhhhhcChHH-HHHHHhcCCcCCCc
Confidence                    5567778999999999999999999987   78999999999999998865543211 11112223445678


Q ss_pred             CHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017580          303 SPEKGINSVLDAALAPP-ETSGVYFFGGKG  331 (369)
Q Consensus       303 ~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g  331 (369)
                      +++|+|+.++.++.... ..+|+++..+.|
T Consensus       208 ~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       208 TPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             CHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            99999999996553322 457888877654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-28  Score=222.38  Aligned_cols=215  Identities=20%  Similarity=0.237  Sum_probs=172.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||+||||++++++|+++|++|++++|+.+..+++.+.....  +.++.++.+|++|++++.++.+        
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--------   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE--------   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc--------
Confidence            578999999999999999999999999999999987777766655443  3468899999999988766432        


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                          +++|++|||||...  +..+.+.+.++..+++|+.+++.+++.++|.+.+++ .++||++||..+.          
T Consensus        72 ----~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~----------  136 (257)
T PRK09291         72 ----WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGL----------  136 (257)
T ss_pred             ----CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhc----------
Confidence                36999999999863  445778999999999999999999999999998776 5899999998876          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-H----H---HHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-S----L---MAF  292 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-~----~---~~~  292 (369)
                                .+.++...|++||++++.++++++.++.   +.+|++++|+||++.|++........ .    .   ...
T Consensus       137 ----------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  203 (257)
T PRK09291        137 ----------ITGPFTGAYCASKHALEAIAEAMHAELK---PFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDP  203 (257)
T ss_pred             ----------cCCCCcchhHHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhh
Confidence                      5556678999999999999999999987   78999999999999998865322110 0    0   000


Q ss_pred             H-HHHHhhCCCCHHHHHHHHHHHhc
Q 017580          293 T-VLKLLGLLQSPEKGINSVLDAAL  316 (369)
Q Consensus       293 ~-~~~~~~~~~~~~e~A~~v~~~~l  316 (369)
                      . ...+. ...+++++++.++..+.
T Consensus       204 ~~~~~~~-~~~~~~~~~~~~~~~l~  227 (257)
T PRK09291        204 EDLAFPL-EQFDPQEMIDAMVEVIP  227 (257)
T ss_pred             hhhhccc-cCCCHHHHHHHHHHHhc
Confidence            0 01111 23689999999887654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=2.1e-29  Score=213.60  Aligned_cols=161  Identities=32%  Similarity=0.489  Sum_probs=145.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC--cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS--SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~--~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      |+++||||++|||+++|++|+++|. +|++++|+  .+..+++.+++...  +.++.++++|++++++++++++++.+  
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--   76 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIK--   76 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccc--
Confidence            6899999999999999999999976 78999999  67788888888754  58999999999999999999999997  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|++|||||+..  +..+.+.+.++++|++|+.+++++.+.++|   +.  .|+||++||.++.        
T Consensus        77 ----~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~--~g~iv~~sS~~~~--------  139 (167)
T PF00106_consen   77 ----RFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---QG--GGKIVNISSIAGV--------  139 (167)
T ss_dssp             ----HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---HT--TEEEEEEEEGGGT--------
T ss_pred             ----ccccccccccccccccccccccccchhhhhccccccceeeeeeehhee---cc--ccceEEecchhhc--------
Confidence                5688999999999874  334678899999999999999999999999   22  5899999999998        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL  257 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el  257 (369)
                                  .+.+.+..|++||+|+.+|+++|++|+
T Consensus       140 ------------~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  140 ------------RGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             ------------SSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------cCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence                        888999999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.8e-28  Score=217.78  Aligned_cols=231  Identities=21%  Similarity=0.209  Sum_probs=184.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||++|||.++++.|+++|++|++++|++++.+++.+++..   ..+++++++|+++++++.++++++..  
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~--   77 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK---YGNIHYVVGDVSSTESARNVIEKAAK--   77 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHHHHHH--
Confidence            5689999999999999999999999999999999998877766555543   23688999999999999999998877  


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                          .++++|.+|+|+|........+.+.+++.+++|+.+++.+++.++|.+.+   .+++|++||..+..         
T Consensus        78 ----~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~---------  141 (238)
T PRK05786         78 ----VLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIY---------  141 (238)
T ss_pred             ----HhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcc---------
Confidence                45789999999997543333345888999999999999999999999864   37999999977641         


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh-h
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-G  299 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~  299 (369)
                                .+.+....|++||+++..++++++.++.   ..+|++++++||++.|++......       ...... .
T Consensus       142 ----------~~~~~~~~Y~~sK~~~~~~~~~~~~~~~---~~gi~v~~i~pg~v~~~~~~~~~~-------~~~~~~~~  201 (238)
T PRK05786        142 ----------KASPDQLSYAVAKAGLAKAVEILASELL---GRGIRVNGIAPTTISGDFEPERNW-------KKLRKLGD  201 (238)
T ss_pred             ----------cCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCccCCCCCchhhh-------hhhccccC
Confidence                      2345567899999999999999999997   789999999999999987532110       001111 2


Q ss_pred             CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          300 LLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      ...+++++|+.+++++.... ..+|.++..++|.
T Consensus       202 ~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~~  235 (238)
T PRK05786        202 DMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGGA  235 (238)
T ss_pred             CCCCHHHHHHHHHHHhcccccCccCCEEEECCcc
Confidence            35799999999998765433 3578887766554

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=5.5e-28  Score=216.82  Aligned_cols=201  Identities=27%  Similarity=0.382  Sum_probs=171.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++++++||||+||||+++|++|+++|+ +|++++|+.+++++         .+.++.++.+|+++.++++++++.   
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~---   70 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA---   70 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh---
Confidence            35689999999999999999999999999 99999999775443         145789999999999998877663   


Q ss_pred             HHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                             .+++|++|||||..   .+..+.+.+.+++.+++|+.+++.+++++.|.++..+ .+++|++||..+.     
T Consensus        71 -------~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~-----  137 (238)
T PRK08264         71 -------ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSW-----  137 (238)
T ss_pred             -------cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhc-----
Confidence                   35799999999983   2345678999999999999999999999999998765 6899999998877     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|+.||++++.+++.++.++.   +.++++++++||.++|++......          
T Consensus       138 ---------------~~~~~~~~y~~sK~a~~~~~~~l~~~~~---~~~i~~~~v~pg~v~t~~~~~~~~----------  189 (238)
T PRK08264        138 ---------------VNFPNLGTYSASKAAAWSLTQALRAELA---PQGTRVLGVHPGPIDTDMAAGLDA----------  189 (238)
T ss_pred             ---------------cCCCCchHhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeCCcccccccccCCc----------
Confidence                           6667788999999999999999999997   789999999999999998654321          


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcC
Q 017580          296 KLLGLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~  317 (369)
                          ...+++++|+.++..+..
T Consensus       190 ----~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        190 ----PKASPADVARQILDALEA  207 (238)
T ss_pred             ----CCCCHHHHHHHHHHHHhC
Confidence                246899999999976654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.1e-28  Score=217.76  Aligned_cols=200  Identities=22%  Similarity=0.204  Sum_probs=149.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.....+  ..  ..  . ....+.+|+++.+++.+       
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~--~~--~-~~~~~~~D~~~~~~~~~-------   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SN--DE--S-PNEWIKWECGKEESLDK-------   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hh--cc--C-CCeEEEeeCCCHHHHHH-------
Confidence            45789999999999999999999999999999999998632111  11  11  1 12678999999887652       


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~~~~~~~  216 (369)
                            ..+++|++|||||+.. ..+.+.+++++++++|+.|++++++.++|.|++++  .++.+++.||.++.      
T Consensus        76 ------~~~~iDilVnnAG~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~------  142 (245)
T PRK12367         76 ------QLASLDVLILNHGINP-GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEI------  142 (245)
T ss_pred             ------hcCCCCEEEECCccCC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccccc------
Confidence                  2467999999999753 34568899999999999999999999999997632  12345455555443      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCC-CCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~-~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                    .+ +....|++||+|+..+. +|++++..+ ...+++|+.++||+++|++...             
T Consensus       143 --------------~~-~~~~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~-------------  193 (245)
T PRK12367        143 --------------QP-ALSPSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSELNPI-------------  193 (245)
T ss_pred             --------------CC-CCCchhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCcccccCcc-------------
Confidence                          22 34567999999986554 555544211 2789999999999999997311             


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                          ...+|+|+|+.+++++...
T Consensus       194 ----~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        194 ----GIMSADFVAKQILDQANLG  212 (245)
T ss_pred             ----CCCCHHHHHHHHHHHHhcC
Confidence                2459999999999876443

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=1.2e-27  Score=216.92  Aligned_cols=217  Identities=26%  Similarity=0.297  Sum_probs=174.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||+||||.+++++|+++|++|++++|+.++++.+.    .    ..++.+++|+++.+++.++++++.+.    
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~i~~~----   70 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S----LGFTGILLDLDDPESVERAADEVIAL----   70 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h----CCCeEEEeecCCHHHHHHHHHHHHHh----
Confidence            68999999999999999999999999999999987665432    1    13678899999999999999888762    


Q ss_pred             CCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                       ..+++|.+|||||...  +..+.+.+.+++.+++|+.|++.+++.++|.|++.+ .++||++||..+.           
T Consensus        71 -~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~-----------  137 (256)
T PRK08017         71 -TDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGL-----------  137 (256)
T ss_pred             -cCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccc-----------
Confidence             2367999999999753  445678899999999999999999999999998776 6899999998876           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH-HHHHHHhhC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-FTVLKLLGL  300 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~  300 (369)
                               .+.+....|++||++++.++++++.++.   ..++++++++||.+.|++............ .........
T Consensus       138 ---------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  205 (256)
T PRK08017        138 ---------ISTPGRGAYAASKYALEAWSDALRMELR---HSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF  205 (256)
T ss_pred             ---------cCCCCccHHHHHHHHHHHHHHHHHHHHh---hcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhc
Confidence                     5566778899999999999999999987   789999999999999998765322110000 000011123


Q ss_pred             CCCHHHHHHHHHHHhcC
Q 017580          301 LQSPEKGINSVLDAALA  317 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~  317 (369)
                      +.+|+|+|+.+..++..
T Consensus       206 ~~~~~d~a~~~~~~~~~  222 (256)
T PRK08017        206 TLGPEAVVPKLRHALES  222 (256)
T ss_pred             CCCHHHHHHHHHHHHhC
Confidence            57999999999976533

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-27  Score=210.61  Aligned_cols=208  Identities=21%  Similarity=0.295  Sum_probs=165.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||++|||++++++|+++|++|++++|+.+..+++.    ..    .+.++.+|+++.++++++++++.      
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~----~~~~~~~D~~~~~~v~~~~~~~~------   67 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL----GAEALALDVADPASVAGLAWKLD------   67 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc----cceEEEecCCCHHHHHHHHHHhc------
Confidence            57999999999999999999999999999999977654432    11    35688999999999998877653      


Q ss_pred             CCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          144 DMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                        .+++|++|||||...    +..+.+.+++++++++|+.+++.+++++.|.|.+.  .|++|++||..+....      
T Consensus        68 --~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~------  137 (222)
T PRK06953         68 --GEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGD------  137 (222)
T ss_pred             --CCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCccccccc------
Confidence              257999999999862    23356899999999999999999999999998664  4899999998765210      


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+......|++||++++.+++.++.++     .++++++|+||+++|++.++.                
T Consensus       138 -----------~~~~~~~~Y~~sK~a~~~~~~~~~~~~-----~~i~v~~v~Pg~i~t~~~~~~----------------  185 (222)
T PRK06953        138 -----------ATGTTGWLYRASKAALNDALRAASLQA-----RHATCIALHPGWVRTDMGGAQ----------------  185 (222)
T ss_pred             -----------ccCCCccccHHhHHHHHHHHHHHhhhc-----cCcEEEEECCCeeecCCCCCC----------------
Confidence                       111112369999999999999999875     379999999999999997541                


Q ss_pred             CCCCHHHHHHHHHHHhcCCC-CCcccEEe
Q 017580          300 LLQSPEKGINSVLDAALAPP-ETSGVYFF  327 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~-~~sG~~~~  327 (369)
                      ...++++.++.+..++...+ ..+|.||-
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (222)
T PRK06953        186 AALDPAQSVAGMRRVIAQATRRDNGRFFQ  214 (222)
T ss_pred             CCCCHHHHHHHHHHHHHhcCcccCceEEe
Confidence            23488999999987654433 56677774

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.96  E-value=5.3e-27  Score=198.62  Aligned_cols=241  Identities=15%  Similarity=0.152  Sum_probs=203.7

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++||+++|+|-.  +.|+..+|+.|.++|+++..+..++ ++++-.+++.+..  ....+++||+++.++|++++++++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHHHH
Confidence            4789999999986  7999999999999999999999987 5665556655543  235789999999999999999999


Q ss_pred             HHHhccCCCCCccEEEeccccc------cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      +      +.+++|.|||+-|..      +++.+.+.|++...+++..++...+++++.|.|..   +|.||.+|-..+. 
T Consensus        80 ~------~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~-  149 (259)
T COG0623          80 K------KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSE-  149 (259)
T ss_pred             H------hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEeccce-
Confidence            9      678999999999975      34557889999999999999999999999999976   4899999987776 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  291 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~  291 (369)
                                         +..|.+...+.+|++++.-+|.||.+++   +.|||||+|+-|+++|=....+........
T Consensus       150 -------------------r~vPnYNvMGvAKAaLEasvRyLA~dlG---~~gIRVNaISAGPIrTLAasgI~~f~~~l~  207 (259)
T COG0623         150 -------------------RVVPNYNVMGVAKAALEASVRYLAADLG---KEGIRVNAISAGPIRTLAASGIGDFRKMLK  207 (259)
T ss_pred             -------------------eecCCCchhHHHHHHHHHHHHHHHHHhC---ccCeEEeeecccchHHHHhhccccHHHHHH
Confidence                               6778888999999999999999999998   899999999999999988777766554443


Q ss_pred             -HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          292 -FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 -~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                       .....|++|..++|||+++.++++..- ...+|+..++|.|-.+.
T Consensus       208 ~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~i~  253 (259)
T COG0623         208 ENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHIM  253 (259)
T ss_pred             HHHhhCCccCCCCHHHhhhhHHHHhcchhcccccceEEEcCCceee
Confidence             344468899999999999999544322 25689999888887654

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.96  E-value=1.1e-27  Score=204.80  Aligned_cols=237  Identities=26%  Similarity=0.375  Sum_probs=192.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-----CEEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREG-----FHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G-----~~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      ..|+++|||++||||.+++.+|++..     .+|+++||+.++++++.+.+.+.+|  ..++.++.+|+++..++.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            36899999999999999999998875     3688899999999999999999988  5678999999999999999999


Q ss_pred             HHHHHHhccCCCCCccEEEeccccccC-----------------------C------CCCCHHhHHHhhhhhhHHHHHHH
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILAT-----------------------S------SRLTPEGYDQMMSTNYIGAFFLT  185 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~~-----------------------~------~~~~~~~~~~~~~vN~~~~~~l~  185 (369)
                      ++++      .+.++|.+..|||++..                       .      ...+.|++...|+.|++|+|.+.
T Consensus        82 di~~------rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli  155 (341)
T KOG1478|consen   82 DIKQ------RFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLI  155 (341)
T ss_pred             HHHH------HhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhH
Confidence            9999      67899999999997521                       0      12467899999999999999999


Q ss_pred             HHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCe
Q 017580          186 KLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  265 (369)
Q Consensus       186 ~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i  265 (369)
                      +.+.|.+..+. ...+|++||..+.   +.+++.+++.        -..+..+|..||.+++.+.-++.+.+.   +.|+
T Consensus       156 ~~l~pll~~~~-~~~lvwtSS~~a~---kk~lsleD~q--------~~kg~~pY~sSKrl~DlLh~A~~~~~~---~~g~  220 (341)
T KOG1478|consen  156 RELEPLLCHSD-NPQLVWTSSRMAR---KKNLSLEDFQ--------HSKGKEPYSSSKRLTDLLHVALNRNFK---PLGI  220 (341)
T ss_pred             hhhhhHhhcCC-CCeEEEEeecccc---cccCCHHHHh--------hhcCCCCcchhHHHHHHHHHHHhcccc---ccch
Confidence            99999998876 4599999998776   3344444332        234556799999999999999999887   8899


Q ss_pred             EEEEecCCcccCCccccchhHHHHHH----HHHHHHhhC---CCCHHHHHHHHHHHhcCCC
Q 017580          266 SVIAADPGVVKTNIMREVPSFLSLMA----FTVLKLLGL---LQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       266 ~v~~v~PG~v~T~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~e~A~~v~~~~l~~~  319 (369)
                      ..++++||...|++........-...    +.....++.   -.+|-.+|++.+|.++..+
T Consensus       221 ~qyvv~pg~~tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l~~p  281 (341)
T KOG1478|consen  221 NQYVVQPGIFTTNSFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTLANP  281 (341)
T ss_pred             hhhcccCceeecchhhhhhhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhhhcCc
Confidence            99999999999999877544333222    222222221   2588899999999998765

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=6.2e-28  Score=204.06  Aligned_cols=232  Identities=22%  Similarity=0.251  Sum_probs=180.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .++++|+||+|.|||..++..+..++-.....+++....+  .+.++...+ ........|++...-...+.+..++   
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~---   78 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRK---   78 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhh---
Confidence            4789999999999999999988888764433333322222  222222222 3344455677776666777777776   


Q ss_pred             ccCCCCCccEEEeccccccCC-----CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          142 DSDMHSSIQLLINNAGILATS-----SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                         +++..|++|||||..++.     ...+.+.|++.+++|+++.+.+.+.++|.+++++-.+.||||||.++.      
T Consensus        79 ---k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav------  149 (253)
T KOG1204|consen   79 ---KGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV------  149 (253)
T ss_pred             ---cCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh------
Confidence               788999999999987653     245789999999999999999999999999988435899999999999      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMA  291 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-----~~~~~~  291 (369)
                                    .|++.+++||+||+|.++|++.|+.|=    +.++++.++.||.|+|+|......     ......
T Consensus       150 --------------~p~~~wa~yc~~KaAr~m~f~~lA~EE----p~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~  211 (253)
T KOG1204|consen  150 --------------RPFSSWAAYCSSKAARNMYFMVLASEE----PFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKM  211 (253)
T ss_pred             --------------ccccHHHHhhhhHHHHHHHHHHHhhcC----ccceeEEEccCCcccchhHHHHhhccCCCHHHHHH
Confidence                          999999999999999999999999883    469999999999999999765432     223334


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF  326 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~  326 (369)
                      +......+++.+|..-|+.+..++......+|+|+
T Consensus       212 f~el~~~~~ll~~~~~a~~l~~L~e~~~f~sG~~v  246 (253)
T KOG1204|consen  212 FKELKESGQLLDPQVTAKVLAKLLEKGDFVSGQHV  246 (253)
T ss_pred             HHHHHhcCCcCChhhHHHHHHHHHHhcCccccccc
Confidence            55556667889999999999987777767788876

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.95  E-value=6.1e-27  Score=210.62  Aligned_cols=221  Identities=23%  Similarity=0.235  Sum_probs=160.0

Q ss_pred             HHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecccc
Q 017580           79 AAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus        79 ~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~  158 (369)
                      +|++|+++|++|++++|+.++.+             ...++++|++|.++++++++++.         +++|+||||||+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~---------~~iD~li~nAG~   58 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALP---------GRIDALFNIAGV   58 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhc---------CCCeEEEECCCC
Confidence            47899999999999999976532             12467899999999999888652         579999999997


Q ss_pred             ccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCC-----Ccccc-cccccccC
Q 017580          159 LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVN-----NETIT-GKFFLRSK  231 (369)
Q Consensus       159 ~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~-----~~~~~-~~~~~~~~  231 (369)
                      ..      .+.+++++++|+.+++.+++.++|.|.+   .|+||++||.++...... +..     ..... ...+....
T Consensus        59 ~~------~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (241)
T PRK12428         59 PG------TAPVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAH  129 (241)
T ss_pred             CC------CCCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhcc
Confidence            52      2457899999999999999999999864   379999999987632110 000     00000 00000013


Q ss_pred             CCchhhhhhhhHHHHHHHHHHHH-HHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHHHhhCCCCHHHHHH
Q 017580          232 CYPCARIYEYSKLCLLIFSYELH-RNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGIN  309 (369)
Q Consensus       232 ~~~~~~~Y~~SK~a~~~~~~~la-~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~A~  309 (369)
                      +.++...|++||+++.++++.++ .|++   +.||+||+|+||+++|+|.++...... ........+++++.+|+|+|+
T Consensus       130 ~~~~~~~Y~~sK~a~~~~~~~la~~e~~---~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~  206 (241)
T PRK12428        130 PVALATGYQLSKEALILWTMRQAQPWFG---ARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAA  206 (241)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHhhh---ccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHH
Confidence            55677899999999999999999 9997   789999999999999999765322111 000112246678889999999


Q ss_pred             HHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          310 SVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       310 ~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .+++++... ...+|+.+..++|..
T Consensus       207 ~~~~l~s~~~~~~~G~~i~vdgg~~  231 (241)
T PRK12428        207 VLVFLCSDAARWINGVNLPVDGGLA  231 (241)
T ss_pred             HHHHHcChhhcCccCcEEEecCchH
Confidence            999654321 246788887777643

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.3e-25  Score=199.64  Aligned_cols=207  Identities=26%  Similarity=0.330  Sum_probs=166.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .|+++||||+|+||++++++|+++ ++|++++|+.++.++..++.      ..++++++|++|++++++++++       
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~-------   68 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQ-------   68 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHh-------
Confidence            478999999999999999999999 99999999977655443322      2478899999999998887763       


Q ss_pred             cCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                         .+++|++||+||....  ..+.+.+.+++.+++|+.+++.+++.+++.++++.  +++|++||..+.          
T Consensus        69 ---~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~----------  133 (227)
T PRK08219         69 ---LGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGL----------  133 (227)
T ss_pred             ---cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhc----------
Confidence               3479999999998643  34567899999999999999999999999998764  799999998876          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhC
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  300 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  300 (369)
                                .+.++...|+.+|++++.+++.++.++.   .. +++++++||.+.|++.........     ...+.++
T Consensus       134 ----------~~~~~~~~y~~~K~a~~~~~~~~~~~~~---~~-i~~~~i~pg~~~~~~~~~~~~~~~-----~~~~~~~  194 (227)
T PRK08219        134 ----------RANPGWGSYAASKFALRALADALREEEP---GN-VRVTSVHPGRTDTDMQRGLVAQEG-----GEYDPER  194 (227)
T ss_pred             ----------CcCCCCchHHHHHHHHHHHHHHHHHHhc---CC-ceEEEEecCCccchHhhhhhhhhc-----cccCCCC
Confidence                      5566678899999999999999998875   44 999999999999887544322110     0112245


Q ss_pred             CCCHHHHHHHHHHHhcC
Q 017580          301 LQSPEKGINSVLDAALA  317 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~  317 (369)
                      +.+++|+|+.++.++..
T Consensus       195 ~~~~~dva~~~~~~l~~  211 (227)
T PRK08219        195 YLRPETVAKAVRFAVDA  211 (227)
T ss_pred             CCCHHHHHHHHHHHHcC
Confidence            68999999999976543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=1.8e-25  Score=212.93  Aligned_cols=196  Identities=22%  Similarity=0.223  Sum_probs=149.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++||+++||||+||||++++++|+++|++|++++|+.+++++..   ...  ...+..+.+|++|++++.+.       
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~--~~~v~~v~~Dvsd~~~v~~~-------  242 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE--DLPVKTLHWQVGQEAALAEL-------  242 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc--CCCeEEEEeeCCCHHHHHHH-------
Confidence            457899999999999999999999999999999999876554322   111  23467889999998876542       


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC---CCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV---PSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~---~g~IV~vsS~~~~~~~~~~  216 (369)
                            .+++|++|||||+.. ..+.+.+++++++++|+.|++.++++++|.|++++.   .+.+|++|| ++.      
T Consensus       243 ------l~~IDiLInnAGi~~-~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~------  308 (406)
T PRK07424        243 ------LEKVDILIINHGINV-HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV------  308 (406)
T ss_pred             ------hCCCCEEEECCCcCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc------
Confidence                  246999999999753 346788999999999999999999999999987642   234666654 322      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                     ..+..+.|++||+|+..++. ++++.     .++.+..+.||+++|++...              
T Consensus       309 ---------------~~~~~~~Y~ASKaAl~~l~~-l~~~~-----~~~~I~~i~~gp~~t~~~~~--------------  353 (406)
T PRK07424        309 ---------------NPAFSPLYELSKRALGDLVT-LRRLD-----APCVVRKLILGPFKSNLNPI--------------  353 (406)
T ss_pred             ---------------cCCCchHHHHHHHHHHHHHH-HHHhC-----CCCceEEEEeCCCcCCCCcC--------------
Confidence                           22345689999999999974 44432     35677778899999987421              


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCC
Q 017580          297 LLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                         ...+||++|+.+++++..+.
T Consensus       354 ---~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        354 ---GVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             ---CCCCHHHHHHHHHHHHHCCC
Confidence               23599999999998764443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.91  E-value=7.6e-23  Score=228.43  Aligned_cols=181  Identities=22%  Similarity=0.197  Sum_probs=152.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcc------------------------------------------
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSH------------------------------------------   98 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~------------------------------------------   98 (369)
                      +++++|||||++|||.++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 699999999820                                          


Q ss_pred             -----hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHH
Q 017580           99 -----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYD  171 (369)
Q Consensus        99 -----~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~  171 (369)
                           ...+..+++++  .+.++.++.||++|.++++++++++.+      . ++||+||||||+..  ...+.+.++|+
T Consensus      2076 ~~~~~ei~~~la~l~~--~G~~v~y~~~DVtD~~av~~av~~v~~------~-g~IDgVVhnAGv~~~~~i~~~t~e~f~ 2146 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKA--AGASAEYASADVTNSVSVAATVQPLNK------T-LQITGIIHGAGVLADKHIQDKTLEEFN 2146 (2582)
T ss_pred             cchhHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHH------h-CCCcEEEECCccCCCCCcccCCHHHHH
Confidence                 01111222222  256789999999999999999999876      4 57999999999863  44578999999


Q ss_pred             HhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHH
Q 017580          172 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSY  251 (369)
Q Consensus       172 ~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  251 (369)
                      +.|++|+.|.+++++++.+.+     .++||++||.++.                    .+.++...|+++|++++.+++
T Consensus      2147 ~v~~~nv~G~~~Ll~al~~~~-----~~~IV~~SSvag~--------------------~G~~gqs~YaaAkaaL~~la~ 2201 (2582)
T TIGR02813      2147 AVYGTKVDGLLSLLAALNAEN-----IKLLALFSSAAGF--------------------YGNTGQSDYAMSNDILNKAAL 2201 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHHhC-----CCeEEEEechhhc--------------------CCCCCcHHHHHHHHHHHHHHH
Confidence            999999999999999987654     2589999999998                    777888999999999999999


Q ss_pred             HHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017580          252 ELHRNLGLDKSRHVSVIAADPGVVKTNIMR  281 (369)
Q Consensus       252 ~la~el~~~~~~~i~v~~v~PG~v~T~~~~  281 (369)
                      .++.++.     +++|++|+||+++|+|..
T Consensus      2202 ~la~~~~-----~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2202 QLKALNP-----SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHcC-----CcEEEEEECCeecCCccc
Confidence            9999863     589999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.89  E-value=4.4e-22  Score=169.37  Aligned_cols=173  Identities=21%  Similarity=0.260  Sum_probs=142.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHH---HHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETM---ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~---~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++||||++|||++++++|+++|+ .|++++|+++..+...   ++++..  +.++.++.+|+++++++.++++++.+ 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   77 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPA-   77 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            4799999999999999999999997 6888899866544332   334332  45788999999999999999998887 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.+.+++++++++|+.+++.+++.+.+    .+ .+++|++||..+.       
T Consensus        78 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~ii~~ss~~~~-------  140 (180)
T smart00822       78 -----RLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP-LDFFVLFSSVAGV-------  140 (180)
T ss_pred             -----HcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC-cceEEEEccHHHh-------
Confidence                 5689999999999763  345678899999999999999999998833    22 5799999998877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  276 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~  276 (369)
                                   .+.++...|+++|+++..+++.++       ..++++.+++||+++
T Consensus       141 -------------~~~~~~~~y~~sk~~~~~~~~~~~-------~~~~~~~~~~~g~~~  179 (180)
T smart00822      141 -------------LGNPGQANYAAANAFLDALAAHRR-------ARGLPATSINWGAWA  179 (180)
T ss_pred             -------------cCCCCchhhHHHHHHHHHHHHHHH-------hcCCceEEEeecccc
Confidence                         566778899999999999997765       456779999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.88  E-value=1.8e-21  Score=189.81  Aligned_cols=220  Identities=15%  Similarity=0.088  Sum_probs=157.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhh-----c--CCCcEEEEEecCCChHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR-----N--KDARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~-----~--~~~~v~~~~~Dls~~~~i~~~~  133 (369)
                      .+||+++||||+||||++++++|+++|++|++++|+.++++.+.+++.+.     +  ...++.++.+|+++.+++.+. 
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence            46899999999999999999999999999999999998887776665431     1  123688999999998876542 


Q ss_pred             HHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          134 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       134 ~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                                  .+++|+||||+|....    ...++...+++|+.|+.++++++.+.    + .+|||++||.++..  
T Consensus       157 ------------LggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g-VgRIV~VSSiga~~--  213 (576)
T PLN03209        157 ------------LGNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA----K-VNHFILVTSLGTNK--  213 (576)
T ss_pred             ------------hcCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh----C-CCEEEEEccchhcc--
Confidence                        2569999999997531    11246778999999999999987543    2 47999999987530  


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       .+.+.. .|. +|.++..+.+.+..++.   ..||++++|+||++.|++.+.... .......
T Consensus       214 -----------------~g~p~~-~~~-sk~~~~~~KraaE~~L~---~sGIrvTIVRPG~L~tp~d~~~~t-~~v~~~~  270 (576)
T PLN03209        214 -----------------VGFPAA-ILN-LFWGVLCWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKET-HNLTLSE  270 (576)
T ss_pred             -----------------cCcccc-chh-hHHHHHHHHHHHHHHHH---HcCCCEEEEECCeecCCccccccc-cceeecc
Confidence                             111111 243 77777777788888887   789999999999999886542100 0000001


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      ...+.++..+.+|+|+.+++++...+...+..+.
T Consensus       271 ~d~~~gr~isreDVA~vVvfLasd~~as~~kvve  304 (576)
T PLN03209        271 EDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVE  304 (576)
T ss_pred             ccccCCCccCHHHHHHHHHHHHcCchhccceEEE
Confidence            1134456789999999999655544445565553

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=8.2e-21  Score=178.18  Aligned_cols=215  Identities=18%  Similarity=0.138  Sum_probs=152.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++||+++||||+|+||++++++|+++|  ++|++.+|+......+.+.+    ...++.++.+|++|.+++.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence            458999999999999999999999987  68999999866544333332    13468899999999988776543    


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                               ++|++||+||.....  ......++.+++|+.|+.++++++.+.    + .++||++||....        
T Consensus        74 ---------~iD~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~aa~~~----~-~~~iV~~SS~~~~--------  129 (324)
T TIGR03589        74 ---------GVDYVVHAAALKQVP--AAEYNPFECIRTNINGAQNVIDAAIDN----G-VKRVVALSTDKAA--------  129 (324)
T ss_pred             ---------cCCEEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeCCCCC--------
Confidence                     389999999975321  112233578999999999999998753    2 3699999996433        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-HHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-LKL  297 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~  297 (369)
                                     .+...|++||++.+.++++++.+.+   ..++++++++||.+..+-..-.+.......... ..+
T Consensus       130 ---------------~p~~~Y~~sK~~~E~l~~~~~~~~~---~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~  191 (324)
T TIGR03589       130 ---------------NPINLYGATKLASDKLFVAANNISG---SKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELP  191 (324)
T ss_pred             ---------------CCCCHHHHHHHHHHHHHHHHHhhcc---ccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCee
Confidence                           2245799999999999999888776   789999999999998764221111111110000 011


Q ss_pred             h------hCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          298 L------GLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       298 ~------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      .      +.+.+++|+|++++.++...  ..|..|.
T Consensus       192 i~~~~~~r~~i~v~D~a~a~~~al~~~--~~~~~~~  225 (324)
T TIGR03589       192 ITDPRMTRFWITLEQGVNFVLKSLERM--LGGEIFV  225 (324)
T ss_pred             eCCCCceEeeEEHHHHHHHHHHHHhhC--CCCCEEc
Confidence            1      12578999999999766432  2345553

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.88  E-value=1.7e-20  Score=176.11  Aligned_cols=240  Identities=16%  Similarity=0.179  Sum_probs=157.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+..+.............++.++.+|+++.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            3789999999999999999999999999999999877654443222211113468899999999988776553       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC-CCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV-NNE  220 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~-~~~  220 (369)
                            ++|++|||||....  ..+.+.+.+.+++|+.+++++++++.+.+.    .++||++||.+++....... +..
T Consensus        77 ------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~----~~~iv~~SS~~~~~~~~~~~~~~~  144 (325)
T PLN02989         77 ------GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVSS----VKRVILTSSMAAVLAPETKLGPND  144 (325)
T ss_pred             ------CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcCC----ceEEEEecchhheecCCccCCCCC
Confidence                  38999999996532  334456788999999999999999877531    36999999987654321100 000


Q ss_pred             cccccccc-ccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHH--HHH
Q 017580          221 TITGKFFL-RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFT--VLK  296 (369)
Q Consensus       221 ~~~~~~~~-~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~--~~~  296 (369)
                      ........ ..........|+.||.+.+.+++.++++      .++.++.+.|+.+..|........ .......  ...
T Consensus       145 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~  218 (325)
T PLN02989        145 VVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD------NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKN  218 (325)
T ss_pred             ccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH------cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCC
Confidence            00000000 0000012357999999999999888764      368899999999988764321110 0111000  001


Q ss_pred             Hh----hCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          297 LL----GLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       297 ~~----~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      +.    +.+..++|+|++++.++... ...|.|..
T Consensus       219 ~~~~~~r~~i~v~Dva~a~~~~l~~~-~~~~~~ni  252 (325)
T PLN02989        219 PFNTTHHRFVDVRDVALAHVKALETP-SANGRYII  252 (325)
T ss_pred             CCCCcCcCeeEHHHHHHHHHHHhcCc-ccCceEEE
Confidence            11    23566899999999665443 33455544

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.87  E-value=7.6e-20  Score=169.92  Aligned_cols=253  Identities=14%  Similarity=0.074  Sum_probs=169.6

Q ss_pred             CCCEEEEeCCCCchHHH--HHHHHHHCCCEEEEEeCCcchHH------------HHHHHHHhhcCCCcEEEEEecCCChH
Q 017580           62 KRPVCIVTGATSGLGAA--AAYALSREGFHVVLVGRSSHLLS------------ETMADITSRNKDARLEAFQVDLSSFQ  127 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~--~a~~La~~G~~Vvl~~r~~~~~~------------~~~~~~~~~~~~~~v~~~~~Dls~~~  127 (369)
                      .+|++||||+++|||.+  +|+.| +.|++|+++++..+..+            .+.+.+.+.  +..+..+.||+++.+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~E  116 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence            47999999999999999  89999 99999988886432211            233333332  446788999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCccEEEeccccccCCC------------------------------------CCCHHhHH
Q 017580          128 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS------------------------------------RLTPEGYD  171 (369)
Q Consensus       128 ~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~------------------------------------~~~~~~~~  171 (369)
                      +++++++++.+      .+|+||+||||+|......                                    ..++++++
T Consensus       117 ~v~~lie~I~e------~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~  190 (398)
T PRK13656        117 IKQKVIELIKQ------DLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIA  190 (398)
T ss_pred             HHHHHHHHHHH------hcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHH
Confidence            99999999998      6789999999999652110                                    12333444


Q ss_pred             HhhhhhhHHH-----HHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchh--hhhhhhHH
Q 017580          172 QMMSTNYIGA-----FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKL  244 (369)
Q Consensus       172 ~~~~vN~~~~-----~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~SK~  244 (369)
                      .+  ++++|.     +.=.+...+.|.+   ++++|..|+....                    ..+|.+  ..-+.+|+
T Consensus       191 ~T--v~vMggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~--------------------~t~p~Y~~g~mG~AKa  245 (398)
T PRK13656        191 DT--VKVMGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPE--------------------LTHPIYWDGTIGKAKK  245 (398)
T ss_pred             HH--HHhhccchHHHHHHHHHhcccccC---CcEEEEEecCCcc--------------------eeecccCCchHHHHHH
Confidence            43  344444     2223444555533   5899999998776                    444544  47799999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCccc
Q 017580          245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV  324 (369)
Q Consensus       245 a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~  324 (369)
                      +++.-++.|+.+|+   +.||++|++.+|.+.|.....+|.......... ..|+--.+-|...+.+..+|...-...|.
T Consensus       246 ~LE~~~r~La~~L~---~~giran~i~~g~~~T~Ass~Ip~~~ly~~~l~-kvmk~~g~he~~ieq~~rl~~~~ly~~~~  321 (398)
T PRK13656        246 DLDRTALALNEKLA---AKGGDAYVSVLKAVVTQASSAIPVMPLYISLLF-KVMKEKGTHEGCIEQIYRLFSERLYRDGA  321 (398)
T ss_pred             HHHHHHHHHHHHhh---hcCCEEEEEecCcccchhhhcCCCcHHHHHHHH-HHHHhcCCCCChHHHHHHHHHHhcccCCC
Confidence            99999999999998   889999999999999999888876554443222 22333335566666666665433111111


Q ss_pred             EEeCCCCccccCCcccCCHHHHH---HHHHH
Q 017580          325 YFFGGKGRTVNSSALSFNSKLAG---ELWTT  352 (369)
Q Consensus       325 ~~~~~~g~~~~~~~~~~d~~~~~---~lw~~  352 (369)
                      --..|+...+...+...+++.|.   ++|+.
T Consensus       322 ~~~~d~~~r~r~d~~el~~~vq~~v~~~~~~  352 (398)
T PRK13656        322 IPEVDEEGRLRLDDWELRPDVQAAVRELWPQ  352 (398)
T ss_pred             CCCcCCcCCcccchhhcCHHHHHHHHHHHHH
Confidence            11122223444455555666664   45543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=2.6e-20  Score=176.05  Aligned_cols=250  Identities=13%  Similarity=0.074  Sum_probs=158.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHH-HHHHHHHh-h-cCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITS-R-NKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~-~~~~~~~~-~-~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.++++|+||||+|+||.+++++|+++|++|++++|+.+... ...+.+.. . ..+.++.++.+|++|.+++.++++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            567899999999999999999999999999999998754311 11122211 1 11346889999999999988877642


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                                 .+|+|||+||....  ....+..+..+++|+.++..+++++.+...+++...++|++||...+.....+
T Consensus        83 -----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~  149 (340)
T PLN02653         83 -----------KPDEVYNLAAQSHV--AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPP  149 (340)
T ss_pred             -----------CCCEEEECCcccch--hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCC
Confidence                       38999999997532  12234457788999999999999998876543211378899987554322111


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-H
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-L  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~  295 (369)
                      ...          ..+..+...|+.||.+.+.++++++.++......++.++.+.||...+.+...+........... .
T Consensus       150 ~~E----------~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~  219 (340)
T PLN02653        150 QSE----------TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQK  219 (340)
T ss_pred             CCC----------CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCC
Confidence            111          13444567899999999999999988764211134455666676433221111110000000000 0


Q ss_pred             -------HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          296 -------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       296 -------~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                             ...+-+...+|+|++++.++...  ..|. |+...|+++.
T Consensus       220 ~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~--~~~~-yni~~g~~~s  263 (340)
T PLN02653        220 KLFLGNLDASRDWGFAGDYVEAMWLMLQQE--KPDD-YVVATEESHT  263 (340)
T ss_pred             ceEeCCCcceecceeHHHHHHHHHHHHhcC--CCCc-EEecCCCcee
Confidence                   00123568999999999655432  2344 4555565554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.85  E-value=2.9e-19  Score=169.47  Aligned_cols=191  Identities=15%  Similarity=0.046  Sum_probs=140.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||+++||||+|+||.+++++|+++|++|++++|+..........+..   ..++.++.+|+++.+++.+++++     
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~-----   73 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAE-----   73 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhh-----
Confidence            3578999999999999999999999999999999987654433332321   33677899999999988887764     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                            .++|++||+||...  ...+.++....+++|+.+++.+++++.+.   .. .+++|++||...+........  
T Consensus        74 ------~~~d~vih~A~~~~--~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~-~~~iv~~SS~~vyg~~~~~~~--  139 (349)
T TIGR02622        74 ------FKPEIVFHLAAQPL--VRKSYADPLETFETNVMGTVNLLEAIRAI---GS-VKAVVNVTSDKCYRNDEWVWG--  139 (349)
T ss_pred             ------cCCCEEEECCcccc--cccchhCHHHHHHHhHHHHHHHHHHHHhc---CC-CCEEEEEechhhhCCCCCCCC--
Confidence                  24899999999642  23445667788999999999999987432   11 369999999765532110000  


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCC-CCCCeEEEEecCCcccCCc
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~-~~~~i~v~~v~PG~v~T~~  279 (369)
                            ..+..+..+...|+.||++.+.+++.++.++... ..++++++++.|+.+..|-
T Consensus       140 ------~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       140 ------YRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             ------CccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence                  0011233456789999999999999999887410 0048999999999998764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=3e-19  Score=165.62  Aligned_cols=237  Identities=12%  Similarity=0.097  Sum_probs=151.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch--HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL--LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+|+|+||||+|+||++++++|+++|++|+++.|+.+.  ..+....+...  +.++.++.+|++|.+++.+++.     
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc-----
Confidence            46899999999999999999999999999999996432  22222222211  3468889999999988754332     


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc-cccCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF-NAQVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~-~~~~~  218 (369)
                              ..|.++|.++....   .+ ..+++++++|+.|++++++++.+.+.    .+|||++||.++.... .....
T Consensus        78 --------~~d~v~~~~~~~~~---~~-~~~~~~~~~nv~gt~~ll~aa~~~~~----v~riV~~SS~~a~~~~~~~~~~  141 (297)
T PLN02583         78 --------GCSGLFCCFDPPSD---YP-SYDEKMVDVEVRAAHNVLEACAQTDT----IEKVVFTSSLTAVIWRDDNIST  141 (297)
T ss_pred             --------CCCEEEEeCccCCc---cc-ccHHHHHHHHHHHHHHHHHHHHhcCC----ccEEEEecchHheecccccCCC
Confidence                    37788887654321   11 24578999999999999999877641    3699999998765311 10000


Q ss_pred             Ccccccccccc-cCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHHH
Q 017580          219 NETITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLK  296 (369)
Q Consensus       219 ~~~~~~~~~~~-~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~  296 (369)
                      ....+...+.. ....+....|+.||...+.+++.++++      .++++++++|+.|.+|........... ..... .
T Consensus       142 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~------~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~-~  214 (297)
T PLN02583        142 QKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD------RGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYE-N  214 (297)
T ss_pred             CCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH------hCCcEEEEcCCcccCCCCCCchhhhcCCcccCc-c
Confidence            00011100000 000011126999999999999888654      478999999999988764321110000 00000 0


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017580          297 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  329 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~  329 (369)
                      ....+.+++|+|++.+.++ ..+...|.|+...
T Consensus       215 ~~~~~v~V~Dva~a~~~al-~~~~~~~r~~~~~  246 (297)
T PLN02583        215 GVLVTVDVNFLVDAHIRAF-EDVSSYGRYLCFN  246 (297)
T ss_pred             cCcceEEHHHHHHHHHHHh-cCcccCCcEEEec
Confidence            0113678999999999555 3445667776643

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=1.6e-18  Score=162.63  Aligned_cols=239  Identities=15%  Similarity=0.191  Sum_probs=153.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +|++++||||+|+||.+++++|+++|++|+++.|+.+..+...+.........++.++.+|+++.+++.++++       
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   76 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------   76 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------
Confidence            5789999999999999999999999999999999877654443322212123468899999999887766554       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc-
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE-  220 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~-  220 (369)
                            .+|++||+||.....   ..+..++.+++|+.|+.++++++...    .+-+|||++||.++..........+ 
T Consensus        77 ------~~d~vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~~~~~~~~  143 (322)
T PLN02986         77 ------GCDAVFHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQPPIEAND  143 (322)
T ss_pred             ------CCCEEEEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCCccCCCCC
Confidence                  389999999974321   11233567999999999999886432    1136999999987542111110000 


Q ss_pred             ccccccccc-cCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHH-HHHHHH-
Q 017580          221 TITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLM-AFTVLK-  296 (369)
Q Consensus       221 ~~~~~~~~~-~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~-~~~~~~-  296 (369)
                      ......+.. .........|+.||.+.+.+++.+.++      .++++++++|+.+.+|....... ..... ...... 
T Consensus       144 ~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~------~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~  217 (322)
T PLN02986        144 VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD------NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN  217 (322)
T ss_pred             CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH------hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC
Confidence            000000000 000012467999999999988887664      36899999999999886432110 00101 000000 


Q ss_pred             ----HhhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          297 ----LLGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       297 ----~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                          ....+.+++|+|++++.++..+ ...|.|..
T Consensus       218 ~~~~~~~~~v~v~Dva~a~~~al~~~-~~~~~yni  251 (322)
T PLN02986        218 LFNNRFYRFVDVRDVALAHIKALETP-SANGRYII  251 (322)
T ss_pred             CCCCcCcceeEHHHHHHHHHHHhcCc-ccCCcEEE
Confidence                0123678999999999766544 33466554

>PLN02650 dihydroflavonol-4-reductase

Probab=99.82  E-value=3.1e-18  Score=162.63  Aligned_cols=236  Identities=16%  Similarity=0.138  Sum_probs=153.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+|++|||||+|.||.+++++|+++|++|++++|+.+................++.++..|+++.+++.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            3578999999999999999999999999999999876655443322211112368889999999887766543       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc---CC
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ---VN  218 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~---~~  218 (369)
                            .+|++||+|+.... .  ..+..+..+++|+.++.++++++.+...    .++||++||..........   .+
T Consensus        77 ------~~d~ViH~A~~~~~-~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~----~~r~v~~SS~~~~~~~~~~~~~~~  143 (351)
T PLN02650         77 ------GCTGVFHVATPMDF-E--SKDPENEVIKPTVNGMLSIMKACAKAKT----VRRIVFTSSAGTVNVEEHQKPVYD  143 (351)
T ss_pred             ------CCCEEEEeCCCCCC-C--CCCchhhhhhHHHHHHHHHHHHHHhcCC----ceEEEEecchhhcccCCCCCCccC
Confidence                  27999999986431 1  1223357899999999999999876421    2599999998554321111   11


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hh-HHHHHHHHHH-
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PS-FLSLMAFTVL-  295 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~-~~~~~~~~~~-  295 (369)
                      +.......+.. ....+...|+.||.+.+.+++.++++      .+++++.+.|+.+.+|..... +. .......... 
T Consensus       144 E~~~~~~~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~------~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~  216 (351)
T PLN02650        144 EDCWSDLDFCR-RKKMTGWMYFVSKTLAEKAAWKYAAE------NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN  216 (351)
T ss_pred             cccCCchhhhh-ccccccchHHHHHHHHHHHHHHHHHH------cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCC
Confidence            11000000000 11123357999999999999888764      478999999999988864321 11 1110000000 


Q ss_pred             ------HHhhCCCCHHHHHHHHHHHhcCCCCCcccE
Q 017580          296 ------KLLGLLQSPEKGINSVLDAALAPPETSGVY  325 (369)
Q Consensus       296 ------~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~  325 (369)
                            ...+.+..++|+|++++.++.. +...|.|
T Consensus       217 ~~~~~~~~~r~~v~V~Dva~a~~~~l~~-~~~~~~~  251 (351)
T PLN02650        217 EAHYSIIKQGQFVHLDDLCNAHIFLFEH-PAAEGRY  251 (351)
T ss_pred             ccccCcCCCcceeeHHHHHHHHHHHhcC-cCcCceE
Confidence                  0113567999999999965543 3334555

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.82  E-value=1.7e-18  Score=163.93  Aligned_cols=244  Identities=14%  Similarity=0.102  Sum_probs=149.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHH-HHHHHHHh---hcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITS---RNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~-~~~~~~~~---~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      |+++||||+|+||.+++++|+++|++|++++|+.+... +....+..   ...+.++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            58999999999999999999999999999999864211 11111111   111246889999999999887777642   


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~  218 (369)
                              ++|++||+|+.....  .+.+.....+++|+.|+..+++++.+.-...  ..++|++||...+..... +..
T Consensus        78 --------~~d~ViH~Aa~~~~~--~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~--~~~~v~~SS~~vyg~~~~~~~~  145 (343)
T TIGR01472        78 --------KPTEIYNLAAQSHVK--VSFEIPEYTADVDGIGTLRLLEAVRTLGLIK--SVKFYQASTSELYGKVQEIPQN  145 (343)
T ss_pred             --------CCCEEEECCcccccc--hhhhChHHHHHHHHHHHHHHHHHHHHhCCCc--CeeEEEeccHHhhCCCCCCCCC
Confidence                    489999999975431  1223345678899999999999987642111  148999999765532111 111


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH---H-
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT---V-  294 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~---~-  294 (369)
                                +..+..+.+.|+.||.+.+.+++.+++++.......+.++...||.-.+.+..............   . 
T Consensus       146 ----------E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (343)
T TIGR01472       146 ----------ETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKL  215 (343)
T ss_pred             ----------CCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCce
Confidence                      11344556789999999999999998876421112233344555532111111111100000000   0 


Q ss_pred             ----HHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          295 ----LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       295 ----~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                          ......+...+|+|++++.++.. + ..|. |+...|+++.
T Consensus       216 ~~g~g~~~rd~i~V~D~a~a~~~~~~~-~-~~~~-yni~~g~~~s  257 (343)
T TIGR01472       216 YLGNLDAKRDWGHAKDYVEAMWLMLQQ-D-KPDD-YVIATGETHS  257 (343)
T ss_pred             eeCCCccccCceeHHHHHHHHHHHHhc-C-CCcc-EEecCCCcee
Confidence                00112457899999999855433 2 2344 5555566654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.82  E-value=3.3e-18  Score=155.33  Aligned_cols=236  Identities=17%  Similarity=0.140  Sum_probs=164.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH--HHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET--MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~--~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+||||||.||.+++++|+++|++|..+.|++++.+.+  ..+++  +.+.+...+..|+++++++.++++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~--~a~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLE--GAKERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcc--cCcccceEEeccccccchHHHHHh-----
Confidence            578999999999999999999999999999999999874443  33333  224569999999999999877665     


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc---
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ---  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~---  216 (369)
                              +.|+++|.|........   +.-.+.++.++.|+.++++++...- .   =.|||++||.++.......   
T Consensus        78 --------gcdgVfH~Asp~~~~~~---~~e~~li~pav~Gt~nVL~ac~~~~-s---VkrvV~TSS~aAv~~~~~~~~~  142 (327)
T KOG1502|consen   78 --------GCDGVFHTASPVDFDLE---DPEKELIDPAVKGTKNVLEACKKTK-S---VKRVVYTSSTAAVRYNGPNIGE  142 (327)
T ss_pred             --------CCCEEEEeCccCCCCCC---CcHHhhhhHHHHHHHHHHHHHhccC-C---cceEEEeccHHHhccCCcCCCC
Confidence                    38999999987533111   1223689999999999999986552 1   2599999999988654222   


Q ss_pred             ---CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          217 ---VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       217 ---~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                         ++.+.+.+..+..    .....|+.||...+.-+..++.|      .++...+|+||.|-.|.....+.........
T Consensus       143 ~~vvdE~~wsd~~~~~----~~~~~Y~~sK~lAEkaAw~fa~e------~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~  212 (327)
T KOG1502|consen  143 NSVVDEESWSDLDFCR----CKKLWYALSKTLAEKAAWEFAKE------NGLDLVTINPGLVFGPGLQPSLNSSLNALLK  212 (327)
T ss_pred             CcccccccCCcHHHHH----hhHHHHHHHHHHHHHHHHHHHHh------CCccEEEecCCceECCCcccccchhHHHHHH
Confidence               2222222222211    11256999998777777666664      4789999999999988876632221111111


Q ss_pred             HHHH--------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017580          294 VLKL--------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  330 (369)
Q Consensus       294 ~~~~--------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~  330 (369)
                      ...-        ...+.+.+|+|.+-+. ++..+..+|+|+..+.
T Consensus       213 ~i~G~~~~~~n~~~~~VdVrDVA~AHv~-a~E~~~a~GRyic~~~  256 (327)
T KOG1502|consen  213 LIKGLAETYPNFWLAFVDVRDVALAHVL-ALEKPSAKGRYICVGE  256 (327)
T ss_pred             HHhcccccCCCCceeeEeHHHHHHHHHH-HHcCcccCceEEEecC
Confidence            1100        0135799999999884 4566677799997553

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.81  E-value=7.4e-19  Score=150.91  Aligned_cols=171  Identities=23%  Similarity=0.329  Sum_probs=132.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc---chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++|||||.+|||..+++.|+++|. +|++++|+.   ...++..+++++.  +.++.++.||++|+++++++++++.+  
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~--   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQ--   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHT--
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHh--
Confidence            789999999999999999999986 899999993   2445667777665  67999999999999999999999887  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .+++|+.+||+||..  .+..+.+++.++.++...+.|..++.+.+.+.    + ...+|..||+++.        
T Consensus        78 ----~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~----~-l~~~i~~SSis~~--------  140 (181)
T PF08659_consen   78 ----RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR----P-LDFFILFSSISSL--------  140 (181)
T ss_dssp             ----TSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT----T-TSEEEEEEEHHHH--------
T ss_pred             ----ccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC----C-CCeEEEECChhHh--------
Confidence                678999999999987  34567899999999999999999999987652    1 4699999999998        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  275 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v  275 (369)
                                  .+.++.+.|+++.+.++.+++..+.       .+..+.+|+-|..
T Consensus       141 ------------~G~~gq~~YaaAN~~lda~a~~~~~-------~g~~~~sI~wg~W  178 (181)
T PF08659_consen  141 ------------LGGPGQSAYAAANAFLDALARQRRS-------RGLPAVSINWGAW  178 (181)
T ss_dssp             ------------TT-TTBHHHHHHHHHHHHHHHHHHH-------TTSEEEEEEE-EB
T ss_pred             ------------ccCcchHhHHHHHHHHHHHHHHHHh-------CCCCEEEEEcccc
Confidence                        7888999999999999999987664       2445777766543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.81  E-value=5.9e-18  Score=160.89  Aligned_cols=242  Identities=12%  Similarity=0.077  Sum_probs=154.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEE-EEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVV-LVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vv-l~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ++++||||+|+||.+++++|.++|++++ +++|.... ... ..+.......++.++.+|++|.++++++++.       
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTE-------   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhh-------
Confidence            4799999999999999999999998754 45554321 111 1111111234678889999999988777663       


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhc---C-CCCCeEEEEcCCcccccccccCC
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN---S-PVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~-~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++|+|||+||....  ..+.+..+..+++|+.++..+++++.+.|..   . ++..++|++||.+.+...... .
T Consensus        73 ----~~~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-~  145 (355)
T PRK10217         73 ----HQPDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHST-D  145 (355)
T ss_pred             ----cCCCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCC-C
Confidence                259999999997532  2334567889999999999999999876421   1 112589999997654211000 0


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-H--
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-L--  295 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~--  295 (369)
                      .      ...+..+..+.+.|+.||.+.+.+++.+++++      ++++..+.|+.+-.|-............... .  
T Consensus       146 ~------~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~------~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~  213 (355)
T PRK10217        146 D------FFTETTPYAPSSPYSASKASSDHLVRAWLRTY------GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKP  213 (355)
T ss_pred             C------CcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCC
Confidence            0      00111344456789999999999999998765      4667778888877654321110000100000 0  


Q ss_pred             HH-------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          296 KL-------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       296 ~~-------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      .+       ...+..++|+|++++.++. .+ ..|..|+..+++++.
T Consensus       214 ~~~~g~g~~~~~~i~v~D~a~a~~~~~~-~~-~~~~~yni~~~~~~s  258 (355)
T PRK10217        214 LPVYGNGQQIRDWLYVEDHARALYCVAT-TG-KVGETYNIGGHNERK  258 (355)
T ss_pred             ceEeCCCCeeeCcCcHHHHHHHHHHHHh-cC-CCCCeEEeCCCCccc
Confidence            01       1135789999999886553 33 345666666666654

>PRK06720 hypothetical protein; Provisional

Probab=99.81  E-value=1.5e-18  Score=146.70  Aligned_cols=140  Identities=18%  Similarity=0.174  Sum_probs=113.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|+++||||++|||.++++.|+++|++|++++|+.+.++++.+++.+.  +.++.++.+|+++.++++++++++.+ 
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~-   89 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN-   89 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            367999999999999999999999999999999999988887777777643  34577889999999999999999887 


Q ss_pred             HhccCCCCCccEEEeccccccC---CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC------CCCeEEEEcCCccc
Q 017580          140 LLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP------VPSRIVNVTSFTHR  210 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~------~~g~IV~vsS~~~~  210 (369)
                           .++++|++|||||+...   ..+.+++. ++  .+|+.+++..++.+.+.|.+++      ..||+..|||.+..
T Consensus        90 -----~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         90 -----AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence                 67899999999998642   22223333 33  6677788889999999887664      36899999986653

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.80  E-value=1.5e-17  Score=155.99  Aligned_cols=240  Identities=14%  Similarity=0.127  Sum_probs=150.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++++||||+|+||++++++|+++|++|++++|+..................++.++.+|+++++++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            3689999999999999999999999999999999876543322211111112478899999999887665543       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc-ccccccCCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR-NVFNAQVNNE  220 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~-~~~~~~~~~~  220 (369)
                            .+|++||+|+......   .+..+..+++|+.++..+++++....   + ..+||++||.++. .......+..
T Consensus        76 ------~~d~Vih~A~~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~---~-~~~~v~~SS~~~~~y~~~~~~~~~  142 (322)
T PLN02662         76 ------GCEGVFHTASPFYHDV---TDPQAELIDPAVKGTLNVLRSCAKVP---S-VKRVVVTSSMAAVAYNGKPLTPDV  142 (322)
T ss_pred             ------CCCEEEEeCCcccCCC---CChHHHHHHHHHHHHHHHHHHHHhCC---C-CCEEEEccCHHHhcCCCcCCCCCC
Confidence                  3799999999753211   12225789999999999999875432   1 3599999997642 1110000000


Q ss_pred             cccccccc-ccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHH-HHHHH--
Q 017580          221 TITGKFFL-RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLM-AFTVL--  295 (369)
Q Consensus       221 ~~~~~~~~-~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~~~~-~~~~~--  295 (369)
                      ........ ..........|+.||.+.+.+++.+.++      .+++++.++|+.+.+|...... ...... .....  
T Consensus       143 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~  216 (322)
T PLN02662        143 VVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE------NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ  216 (322)
T ss_pred             cCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc
Confidence            00000000 0000111247999999999988877654      4688999999999988643211 110110 00000  


Q ss_pred             -HH--hhCCCCHHHHHHHHHHHhcCCCCCcccEEeC
Q 017580          296 -KL--LGLLQSPEKGINSVLDAALAPPETSGVYFFG  328 (369)
Q Consensus       296 -~~--~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~  328 (369)
                       .+  ...+..++|+|++++.++.. +...|.|+..
T Consensus       217 ~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~~  251 (322)
T PLN02662        217 TFPNASYRWVDVRDVANAHIQAFEI-PSASGRYCLV  251 (322)
T ss_pred             cCCCCCcCeEEHHHHHHHHHHHhcC-cCcCCcEEEe
Confidence             00  12357899999999965544 3335666553

>PLN02214 cinnamoyl-CoA reductase

Probab=99.79  E-value=1.6e-17  Score=157.03  Aligned_cols=230  Identities=16%  Similarity=0.168  Sum_probs=152.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH-HHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET-MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~-~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++++++||||+|+||++++++|+++|++|++++|+.+..... ..++..  ...++.++.+|+++.+++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence            4678999999999999999999999999999999987643221 222221  12468889999999888766543     


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc----
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA----  215 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~----  215 (369)
                              ++|++||+||...       +..++.+++|+.++..+++++.+.    + -+|||++||.++......    
T Consensus        81 --------~~d~Vih~A~~~~-------~~~~~~~~~nv~gt~~ll~aa~~~----~-v~r~V~~SS~~avyg~~~~~~~  140 (342)
T PLN02214         81 --------GCDGVFHTASPVT-------DDPEQMVEPAVNGAKFVINAAAEA----K-VKRVVITSSIGAVYMDPNRDPE  140 (342)
T ss_pred             --------cCCEEEEecCCCC-------CCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeccceeeeccCCCCCC
Confidence                    3899999999641       235678999999999999987543    2 359999999765432111    


Q ss_pred             -cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hh-HHHHHHH
Q 017580          216 -QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PS-FLSLMAF  292 (369)
Q Consensus       216 -~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~-~~~~~~~  292 (369)
                       .++++.....    ..+..+...|+.||.+.+.+++.++++.      ++++.+++|+.|-.|-.... .. .......
T Consensus       141 ~~~~E~~~~~~----~~~~~p~~~Y~~sK~~aE~~~~~~~~~~------g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~  210 (342)
T PLN02214        141 AVVDESCWSDL----DFCKNTKNWYCYGKMVAEQAAWETAKEK------GVDLVVLNPVLVLGPPLQPTINASLYHVLKY  210 (342)
T ss_pred             cccCcccCCCh----hhccccccHHHHHHHHHHHHHHHHHHHc------CCcEEEEeCCceECCCCCCCCCchHHHHHHH
Confidence             1111110000    0122245689999999999998887653      68899999999987753211 11 0000000


Q ss_pred             HHH-HH-----hhCCCCHHHHHHHHHHHhcCCCCCcccEEeC
Q 017580          293 TVL-KL-----LGLLQSPEKGINSVLDAALAPPETSGVYFFG  328 (369)
Q Consensus       293 ~~~-~~-----~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~  328 (369)
                      ... .+     ...+..++|+|++++.++. .+...|.|...
T Consensus       211 ~~g~~~~~~~~~~~~i~V~Dva~a~~~al~-~~~~~g~yn~~  251 (342)
T PLN02214        211 LTGSAKTYANLTQAYVDVRDVALAHVLVYE-APSASGRYLLA  251 (342)
T ss_pred             HcCCcccCCCCCcCeeEHHHHHHHHHHHHh-CcccCCcEEEe
Confidence            000 00     1135689999999996553 33445777653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.79  E-value=8e-17  Score=152.91  Aligned_cols=183  Identities=16%  Similarity=0.151  Sum_probs=127.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++++++||||+|+||.+++++|+++|++|++++|...........+....  ...++.++.+|+++++++.+++++  
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--   79 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS--   79 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh--
Confidence            3568999999999999999999999999999999876443322222222211  134678899999999988777653  


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-cc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQ  216 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~  216 (369)
                               ..+|++||+||....  ..+.+..++.+++|+.++..+++++.    +.+ .+++|++||...+.... ..
T Consensus        80 ---------~~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~vyg~~~~~~  143 (352)
T PLN02240         80 ---------TRFDAVIHFAGLKAV--GESVAKPLLYYDNNLVGTINLLEVMA----KHG-CKKLVFSSSATVYGQPEEVP  143 (352)
T ss_pred             ---------CCCCEEEEccccCCc--cccccCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEccHHHhCCCCCCC
Confidence                     258999999997532  12335667899999999999988653    222 36999999965442111 11


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  275 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v  275 (369)
                      ++          +..+..+...|+.||.+.+.+++.++.+.     .++.+..+.|+.+
T Consensus       144 ~~----------E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~~R~~~v  187 (352)
T PLN02240        144 CT----------EEFPLSATNPYGRTKLFIEEICRDIHASD-----PEWKIILLRYFNP  187 (352)
T ss_pred             CC----------CCCCCCCCCHHHHHHHHHHHHHHHHHHhc-----CCCCEEEEeecCc
Confidence            11          11344456789999999999999887542     3456666665443

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.78  E-value=4e-17  Score=154.22  Aligned_cols=237  Identities=17%  Similarity=0.144  Sum_probs=151.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++++||||+|+||++++++|+++|++|++++|+.+....... +.......++.++.+|++|.+++.++++      
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence            457899999999999999999999999999999988654433221 1111101358889999999887766443      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-----c
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-----A  215 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-----~  215 (369)
                             ++|++||+|+... .  ...+.....+++|+.++..+++++.+..   + .++||++||.+.+....     .
T Consensus        80 -------~~d~vih~A~~~~-~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~---~-~~~~v~~SS~~~~g~~~~~~~~~  145 (338)
T PLN00198         80 -------GCDLVFHVATPVN-F--ASEDPENDMIKPAIQGVHNVLKACAKAK---S-VKRVILTSSAAAVSINKLSGTGL  145 (338)
T ss_pred             -------cCCEEEEeCCCCc-c--CCCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeecceeeeccCCCCCCc
Confidence                   3799999998532 1  1123345678999999999999976531   1 36999999987664221     1


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHH-HHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLM-AFT  293 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~-~~~  293 (369)
                      ..+++......+.. ...++...|+.||.+.+.+++.++.+      .++.++++.|+.|..|-... .+...... ...
T Consensus       146 ~~~E~~~~~~~~~~-~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~  218 (338)
T PLN00198        146 VMNEKNWTDVEFLT-SEKPPTWGYPASKTLAEKAAWKFAEE------NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLI  218 (338)
T ss_pred             eeccccCCchhhhh-hcCCccchhHHHHHHHHHHHHHHHHh------cCceEEEEeCCceECCCccCCCCCcHHHHHHHH
Confidence            11111110000000 12345668999999999999888764      46889999999998775321 11111000 000


Q ss_pred             H---H-------HH----hhCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017580          294 V---L-------KL----LGLLQSPEKGINSVLDAALAPPETSGVYF  326 (369)
Q Consensus       294 ~---~-------~~----~~~~~~~~e~A~~v~~~~l~~~~~sG~~~  326 (369)
                      .   .       .+    ...+..++|+|++++.++.. +...|.|+
T Consensus       219 ~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~-~~~~~~~~  264 (338)
T PLN00198        219 TGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK-ESASGRYI  264 (338)
T ss_pred             cCCccccccccccccccCCcceeEHHHHHHHHHHHhhC-cCcCCcEE
Confidence            0   0       00    02467899999999855433 33345553

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.78  E-value=8.3e-17  Score=152.96  Aligned_cols=237  Identities=17%  Similarity=0.137  Sum_probs=153.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      -.+++++||||+|+||.+++++|+++|++|++++|+.+....+...+..   +.++.++.+|+++.+++.++++      
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc------
Confidence            3577999999999999999999999999999999987665554444321   3568899999999888766543      


Q ss_pred             hccCCCCCccEEEeccccccCCC---CCCHHhH--HHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSS---RLTPEGY--DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~---~~~~~~~--~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                             .+|++||+|+......   ..+++.+  ..++++|+.++..+++++.+..   . .++||++||.+.+...+.
T Consensus        79 -------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~-~~~~v~~SS~~vyg~~~~  147 (353)
T PLN02896         79 -------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T-VKRVVFTSSISTLTAKDS  147 (353)
T ss_pred             -------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C-ccEEEEEechhhcccccc
Confidence                   3899999999764322   1223332  3466778899999999876542   1 369999999876643211


Q ss_pred             ------cCCCcccccccccc-cCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHH
Q 017580          216 ------QVNNETITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFL  287 (369)
Q Consensus       216 ------~~~~~~~~~~~~~~-~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~~~  287 (369)
                            .++++....  ... ..+.++...|+.||.+.+.+++.++++      .++++.++.|+.|-.|.... .+...
T Consensus       148 ~~~~~~~~~E~~~~p--~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~lR~~~vyGp~~~~~~~~~~  219 (353)
T PLN02896        148 NGRWRAVVDETCQTP--IDHVWNTKASGWVYVLSKLLTEEAAFKYAKE------NGIDLVSVITTTVAGPFLTPSVPSSI  219 (353)
T ss_pred             CCCCCCccCcccCCc--HHHhhccCCCCccHHHHHHHHHHHHHHHHHH------cCCeEEEEcCCcccCCCcCCCCCchH
Confidence                  111110000  000 001223457999999999999888764      36899999999888775432 22111


Q ss_pred             HHHHHH-----HHHH----------hhCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017580          288 SLMAFT-----VLKL----------LGLLQSPEKGINSVLDAALAPPETSGVYF  326 (369)
Q Consensus       288 ~~~~~~-----~~~~----------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~  326 (369)
                      ......     ...+          .+-+..++|+|++++.++.. +...|.|+
T Consensus       220 ~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~-~~~~~~~~  272 (353)
T PLN02896        220 QVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ-TKAEGRYI  272 (353)
T ss_pred             HHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhC-CCcCccEE
Confidence            111000     0000          01256899999999976543 32345553

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=2.2e-17  Score=157.88  Aligned_cols=230  Identities=13%  Similarity=0.137  Sum_probs=181.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++||+++||||+|.||.++++++++.+. ++++.+|++-+.-....+++..++..++.++-+|+.|.+.+.++++.   
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~---  323 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG---  323 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc---
Confidence            47899999999999999999999999996 89999999999999999999988888999999999999988877764   


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                              -++|+++|+|+.-+  -.+-+....+.+.+|++|+.++++++...-     -.++|.+|+--+.        
T Consensus       324 --------~kvd~VfHAAA~KH--VPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-----V~~~V~iSTDKAV--------  380 (588)
T COG1086         324 --------HKVDIVFHAAALKH--VPLVEYNPEEAIKTNVLGTENVAEAAIKNG-----VKKFVLISTDKAV--------  380 (588)
T ss_pred             --------CCCceEEEhhhhcc--CcchhcCHHHHHHHhhHhHHHHHHHHHHhC-----CCEEEEEecCccc--------
Confidence                    45999999998642  123345667789999999999999986552     3599999996555        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH---
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL---  295 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~---  295 (369)
                                     .+-+.||+||...+.++.+++.+..   ..+-++.+|.=|.|-..-..-.|-+........-   
T Consensus       381 ---------------~PtNvmGaTKr~aE~~~~a~~~~~~---~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTv  442 (588)
T COG1086         381 ---------------NPTNVMGATKRLAEKLFQAANRNVS---GTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTV  442 (588)
T ss_pred             ---------------CCchHhhHHHHHHHHHHHHHhhccC---CCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccc
Confidence                           4556899999999999999998765   4478899999998876544434443332221100   


Q ss_pred             ---HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          296 ---KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       296 ---~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                         ...+.+.|..|+++.++.++..  ..+|..|.-+-|+|+.
T Consensus       443 Tdp~mtRyfMTI~EAv~LVlqA~a~--~~gGeifvldMGepvk  483 (588)
T COG1086         443 TDPDMTRFFMTIPEAVQLVLQAGAI--AKGGEIFVLDMGEPVK  483 (588)
T ss_pred             cCCCceeEEEEHHHHHHHHHHHHhh--cCCCcEEEEcCCCCeE
Confidence               0113457999999999976544  4568888888888886

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.77  E-value=9.3e-17  Score=156.46  Aligned_cols=200  Identities=16%  Similarity=0.101  Sum_probs=135.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc---h----H---------HHHHHHHHhhcCCCcEEEEEe
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH---L----L---------SETMADITSRNKDARLEAFQV  121 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~---~----~---------~~~~~~~~~~~~~~~v~~~~~  121 (369)
                      ...+++++|+||||+|+||++++++|+++|++|++++|...   .    .         .+-.+.+... .+.++.++.+
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~  120 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVG  120 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEEC
Confidence            34678899999999999999999999999999999874321   1    0         0001111111 1346889999


Q ss_pred             cCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccccccC-CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCe
Q 017580          122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR  200 (369)
Q Consensus       122 Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~  200 (369)
                      |++|.+++.++++.           .++|+|||+|+.... ....+++..+..+++|+.|+.++++++...-  .  ..+
T Consensus       121 Dl~d~~~v~~~l~~-----------~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--v--~~~  185 (442)
T PLN02572        121 DICDFEFLSEAFKS-----------FEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--P--DCH  185 (442)
T ss_pred             CCCCHHHHHHHHHh-----------CCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC--C--Ccc
Confidence            99999988877764           248999999976432 2234556677889999999999999875531  1  248


Q ss_pred             EEEEcCCcccccccccCCCcccccc-cc-cc--cCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc
Q 017580          201 IVNVTSFTHRNVFNAQVNNETITGK-FF-LR--SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  276 (369)
Q Consensus       201 IV~vsS~~~~~~~~~~~~~~~~~~~-~~-~~--~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~  276 (369)
                      +|++||...+.....+++++.+... .. ..  ..+..+...|+.||.+.+.+++..++.      .++.+.++.|+.+.
T Consensus       186 ~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~------~gl~~v~lR~~~vy  259 (442)
T PLN02572        186 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA------WGIRATDLNQGVVY  259 (442)
T ss_pred             EEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh------cCCCEEEEeccccc
Confidence            9999998766432211111111000 00 00  013334568999999999988887754      47889999999987


Q ss_pred             CCc
Q 017580          277 TNI  279 (369)
Q Consensus       277 T~~  279 (369)
                      .+.
T Consensus       260 Gp~  262 (442)
T PLN02572        260 GVR  262 (442)
T ss_pred             CCC
Confidence            764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.77  E-value=7.8e-17  Score=150.36  Aligned_cols=232  Identities=13%  Similarity=0.079  Sum_probs=149.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcch-HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++||||+|+||.+++++|++.|  .+|++.+|.... ..+..+.+.   ...++.++.+|++|++++.++++.      
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~------   71 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTE------   71 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhh------
Confidence            38999999999999999999987  689888764321 111111221   124678899999999998877653      


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc--cCCC
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA--QVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~--~~~~  219 (369)
                           .++|++||+|+....  ..+.+..+..+++|+.++..+++++.+.+.    ..++|++||...+.....  ...+
T Consensus        72 -----~~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v~g~~~~~~~~~e  140 (317)
T TIGR01181        72 -----HQPDAVVHFAAESHV--DRSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEVYGDLEKGDAFTE  140 (317)
T ss_pred             -----cCCCEEEEcccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccceeCCCCCCCCcCC
Confidence                 248999999997532  223455678899999999999988765432    258999999664422111  1111


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-HHHh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-LKLL  298 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~  298 (369)
                                ..+..+...|+.+|.+.+.+++.++.+.      ++++.++.|+.+..+................ ..+.
T Consensus       141 ----------~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~  204 (317)
T TIGR01181       141 ----------TTPLAPSSPYSASKAASDHLVRAYHRTY------GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPL  204 (317)
T ss_pred             ----------CCCCCCCCchHHHHHHHHHHHHHHHHHh------CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCc
Confidence                      1233445689999999999999987754      5788999999887664321110000000000 0000


Q ss_pred             ---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          299 ---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       299 ---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                               .-+..++|+|+++..++.. + ..|..|...++.++
T Consensus       205 ~~~~~g~~~~~~i~v~D~a~~~~~~~~~-~-~~~~~~~~~~~~~~  247 (317)
T TIGR01181       205 PVYGDGQQVRDWLYVEDHCRAIYLVLEK-G-RVGETYNIGGGNER  247 (317)
T ss_pred             eEeCCCceEEeeEEHHHHHHHHHHHHcC-C-CCCceEEeCCCCce
Confidence                     1235689999999866532 2 34455555544444

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.75  E-value=2.9e-16  Score=149.08  Aligned_cols=245  Identities=12%  Similarity=0.042  Sum_probs=150.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFH-VVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++||||+|+||.+++++|+++|.+ |+.+++..  ...+..    ....++.+++++.+|++|.+++.+++++      
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------   71 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL----ADVSDSERYVFEHADICDRAELDRIFAQ------   71 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH----HhcccCCceEEEEecCCCHHHHHHHHHh------
Confidence            5899999999999999999999986 55555532  112211    1111234678899999999998887763      


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC----CCCCeEEEEcCCcccccccccC
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS----PVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~----~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++|++||+||....  ..+.+..++.+++|+.|+..+++++.+.|...    ++..++|++||...+.....+.
T Consensus        72 -----~~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  144 (352)
T PRK10084         72 -----HQPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPD  144 (352)
T ss_pred             -----cCCCEEEECCcccCC--cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccc
Confidence                 259999999997532  11223457789999999999999998876422    1124899999976553211000


Q ss_pred             CCccccc-ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH-HHHH
Q 017580          218 NNETITG-KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-FTVL  295 (369)
Q Consensus       218 ~~~~~~~-~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~  295 (369)
                      +..+... ..+.+..+..+...|+.||.+.+.+++.+++++      ++.+..+.|+.|-.|-............ ....
T Consensus       145 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~  218 (352)
T PRK10084        145 EVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY------GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG  218 (352)
T ss_pred             cccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEeccceeCCCcCccchHHHHHHHHhcC
Confidence            0000000 001112344556789999999999999988765      3556667777776554211100000000 0000


Q ss_pred             H--H-------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          296 K--L-------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       296 ~--~-------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      .  +       ...+..++|+|++++.++. .+ ..|..|...++.+.
T Consensus       219 ~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~-~~-~~~~~yni~~~~~~  264 (352)
T PRK10084        219 KPLPIYGKGDQIRDWLYVEDHARALYKVVT-EG-KAGETYNIGGHNEK  264 (352)
T ss_pred             CCeEEeCCCCeEEeeEEHHHHHHHHHHHHh-cC-CCCceEEeCCCCcC
Confidence            0  1       1124689999999985543 33 23555555555544

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.75  E-value=1.3e-16  Score=146.20  Aligned_cols=236  Identities=17%  Similarity=0.105  Sum_probs=155.9

Q ss_pred             EEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           67 IVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        67 lITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      |||||+|.||.+++++|+++|  ++|.+++++......  .....   -....++.+|++|.+++.++++          
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~----------   65 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALE----------   65 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhc----------
Confidence            699999999999999999999  689888887653221  11111   1223399999999998877655          


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc--cccCCCccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF--NAQVNNETI  222 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~--~~~~~~~~~  222 (369)
                         ..|++||.|++.....   ....+..+++|+.|+-++++++...    + -.|+|++||.+.....  ..++...+.
T Consensus        66 ---g~d~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~----~-VkrlVytSS~~vv~~~~~~~~~~~~dE  134 (280)
T PF01073_consen   66 ---GVDVVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKA----G-VKRLVYTSSISVVFDNYKGDPIINGDE  134 (280)
T ss_pred             ---CCceEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcCcceeEeccCCCCcccCCc
Confidence               3799999999764332   3446789999999999999987643    2 4699999999877541  111111000


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHH-HhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHH-HHHHh-
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHR-NLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFT-VLKLL-  298 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~-el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~-~~~~~-  298 (369)
                      .     ...+......|+.||+..+.++..... ++.  ....++..+++|..|-.|-...... ........ ..... 
T Consensus       135 ~-----~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~--~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g  207 (280)
T PF01073_consen  135 D-----TPYPSSPLDPYAESKALAEKAVLEANGSELK--NGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIG  207 (280)
T ss_pred             C-----CcccccccCchHHHHHHHHHHHHhhcccccc--cccceeEEEEeccEEeCcccccccchhhHHHHhcccceeec
Confidence            0     012233566899999999998877654 222  1346899999999998775443322 11111111 00111 


Q ss_pred             -----hCCCCHHHHHHHHHHHh---cCC---CCCcccEEeCCCCcccc
Q 017580          299 -----GLLQSPEKGINSVLDAA---LAP---PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 -----~~~~~~~e~A~~v~~~~---l~~---~~~sG~~~~~~~g~~~~  335 (369)
                           ..+..++++|.+.+-+.   +.+   +...|+.|+..+++|+.
T Consensus       208 ~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  208 DGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             CCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence                 12456999999887443   222   35678888888888774

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02686 cinnamoyl-CoA reductase

Probab=99.75  E-value=3.1e-16  Score=149.58  Aligned_cols=228  Identities=13%  Similarity=0.063  Sum_probs=145.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc----CCCcEEEEEecCCChHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      .+.++|+|+||||+|+||.+++++|+++|++|+++.|+.+..+.+ +++....    ....+.++.+|++|.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            357799999999999999999999999999999999987655444 2222110    11357889999999998877665


Q ss_pred             HHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc-cccc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH-RNVF  213 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~-~~~~  213 (369)
                      .             +|.++|.|+...+.....  ..+...++|+.++..+++++...   .+ -.++|++||.++ ....
T Consensus       128 ~-------------~d~V~hlA~~~~~~~~~~--~~~~~~~~nv~gt~~llea~~~~---~~-v~r~V~~SS~~~~vyg~  188 (367)
T PLN02686        128 G-------------CAGVFHTSAFVDPAGLSG--YTKSMAELEAKASENVIEACVRT---ES-VRKCVFTSSLLACVWRQ  188 (367)
T ss_pred             h-------------ccEEEecCeeeccccccc--ccchhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccHHHhcccc
Confidence            2             678888888753322111  11345678999999888886432   11 359999999742 1111


Q ss_pred             --ccc----CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhH
Q 017580          214 --NAQ----VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSF  286 (369)
Q Consensus       214 --~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~~  286 (369)
                        ...    ++.....    ....+..+...|+.||.+.+.+++.++++      .++++++++|+.|.+|-... .+..
T Consensus       189 ~~~~~~~~~i~E~~~~----~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~gl~~v~lRp~~vyGp~~~~~~~~~  258 (367)
T PLN02686        189 NYPHDLPPVIDEESWS----DESFCRDNKLWYALGKLKAEKAAWRAARG------KGLKLATICPALVTGPGFFRRNSTA  258 (367)
T ss_pred             cCCCCCCcccCCCCCC----ChhhcccccchHHHHHHHHHHHHHHHHHh------cCceEEEEcCCceECCCCCCCCChh
Confidence              000    1111000    00122334567999999999999887764      47999999999999885322 1111


Q ss_pred             HHHHHHHHHHHh--h--CCCCHHHHHHHHHHHhc
Q 017580          287 LSLMAFTVLKLL--G--LLQSPEKGINSVLDAAL  316 (369)
Q Consensus       287 ~~~~~~~~~~~~--~--~~~~~~e~A~~v~~~~l  316 (369)
                      ............  +  .+.+++|+|++++.++.
T Consensus       259 ~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        259 TIAYLKGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             HHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            100000000011  1  25789999999986554

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.74  E-value=1.4e-15  Score=143.58  Aligned_cols=179  Identities=15%  Similarity=0.076  Sum_probs=122.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||++++++|+++|++|++++|...........+.+. .+.++.++.+|++|.+++.++++.         
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~---------   71 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILHD---------   71 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHhc---------
Confidence            5899999999999999999999999999887543333322223221 234577889999999887776542         


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCcccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNETIT  223 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~~~~  223 (369)
                        .++|++||+||......  ..+...+.+++|+.++..+++++.    +.+ .+++|++||...+.... .+++++   
T Consensus        72 --~~~d~vvh~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~yg~~~~~~~~E~---  139 (338)
T PRK10675         72 --HAIDTVIHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMR----AAN-VKNLIFSSSATVYGDQPKIPYVES---  139 (338)
T ss_pred             --CCCCEEEECCccccccc--hhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEeccHHhhCCCCCCccccc---
Confidence              35999999999753211  223345688999999999887653    333 46899999976542211 111111   


Q ss_pred             cccccccCCC-chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccC
Q 017580          224 GKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  277 (369)
Q Consensus       224 ~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T  277 (369)
                             .+. .+...|+.||.+.+.+++.++++.     .++++..+.|+.+..
T Consensus       140 -------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~ilR~~~v~g  182 (338)
T PRK10675        140 -------FPTGTPQSPYGKSKLMVEQILTDLQKAQ-----PDWSIALLRYFNPVG  182 (338)
T ss_pred             -------cCCCCCCChhHHHHHHHHHHHHHHHHhc-----CCCcEEEEEeeeecC
Confidence                   221 345689999999999999987653     356677777655443

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.74  E-value=8e-16  Score=145.88  Aligned_cols=239  Identities=12%  Similarity=0.036  Sum_probs=154.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc---CCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN---KDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~---~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +++++|+||||+|.||.+++++|+++|++|++++|................   ...++.++.+|++|.+++.++++   
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence            457899999999999999999999999999999986543322222221111   11357889999999876655443   


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-cc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQ  216 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~  216 (369)
                                .+|++||.|+......  +.++....+++|+.|+..+++.+..    .+ -.++|++||...+.... .+
T Consensus        90 ----------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~----~~-~~~~v~~SS~~vyg~~~~~~  152 (348)
T PRK15181         90 ----------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARD----AH-VSSFTYAASSSTYGDHPDLP  152 (348)
T ss_pred             ----------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeechHhhCCCCCCC
Confidence                      3899999999753221  2233456799999999999987643    22 35999999976553211 11


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFLSL  289 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-------~~~~~~  289 (369)
                      ..+          +.+..+...|+.||.+.+.+++..+.+      .++++..+.|+.+-.|-....       +.....
T Consensus       153 ~~e----------~~~~~p~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~  216 (348)
T PRK15181        153 KIE----------ERIGRPLSPYAVTKYVNELYADVFARS------YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILS  216 (348)
T ss_pred             CCC----------CCCCCCCChhhHHHHHHHHHHHHHHHH------hCCCEEEEEecceeCcCCCCCCccccCHHHHHHH
Confidence            111          122234468999999999998887654      368899999999877643211       111111


Q ss_pred             HHH-HHHHHh------hCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017580          290 MAF-TVLKLL------GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  335 (369)
Q Consensus       290 ~~~-~~~~~~------~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~~  335 (369)
                      ... ......      +-+...+|+|++++.++..++ ...|..|+...|+...
T Consensus       217 ~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s  270 (348)
T PRK15181        217 LLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTS  270 (348)
T ss_pred             HHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEe
Confidence            000 000001      124679999999986554433 2346667777666654

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.73  E-value=5.1e-16  Score=145.71  Aligned_cols=226  Identities=18%  Similarity=0.096  Sum_probs=146.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||.+++++|+++|++|++++|+.+.....        ....+.++.+|+++.+++.++++          
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~----------   63 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL--------EGLDVEIVEGDLRDPASLRKAVA----------   63 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc--------ccCCceEEEeeCCCHHHHHHHHh----------
Confidence            699999999999999999999999999999987653221        12357889999999987766543          


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                         .+|++||+|+....    ..+..+..+++|+.++..+++++...    + .+++|++||...+..........+...
T Consensus        64 ---~~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~e~~~  131 (328)
T TIGR03466        64 ---GCRALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALEA----G-VERVVYTSSVATLGVRGDGTPADETTP  131 (328)
T ss_pred             ---CCCEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHHh----C-CCeEEEEechhhcCcCCCCCCcCccCC
Confidence               37999999986421    12345678999999999998886542    2 369999999876532111111010000


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH--HHHh----
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV--LKLL----  298 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~----  298 (369)
                           ..+......|+.+|.+.+.+++.++.+      .++++..++|+.+..+-...............  ..+.    
T Consensus       132 -----~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (328)
T TIGR03466       132 -----SSLDDMIGHYKRSKFLAEQAALEMAAE------KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDT  200 (328)
T ss_pred             -----CCcccccChHHHHHHHHHHHHHHHHHh------cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCC
Confidence                 011122457999999999999888754      36789999999887654321111111100000  0000    


Q ss_pred             -hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          299 -GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       299 -~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                       ..+..++|+|++++.++..  ...|.+|..+ +.++
T Consensus       201 ~~~~i~v~D~a~a~~~~~~~--~~~~~~~~~~-~~~~  234 (328)
T TIGR03466       201 GLNLVHVDDVAEGHLLALER--GRIGERYILG-GENL  234 (328)
T ss_pred             CcceEEHHHHHHHHHHHHhC--CCCCceEEec-CCCc
Confidence             1245799999998866543  2346666544 4433

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.72  E-value=3e-16  Score=141.97  Aligned_cols=208  Identities=16%  Similarity=0.147  Sum_probs=131.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +.++++++||||+|+||++++++|+++|++|+++.|+.++......    .  +.++.++.+|+++..  ..+.+.+.  
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~Dl~d~~--~~l~~~~~--   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q--DPSLQIVRADVTEGS--DKLVEAIG--   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c--CCceEEEEeeCCCCH--HHHHHHhh--
Confidence            4567899999999999999999999999999999999765433211    1  236889999999831  12222211  


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                             .++|++|+|+|...+...      ...+++|+.++..+++++.    +.+ .++||++||...+...      
T Consensus        84 -------~~~d~vi~~~g~~~~~~~------~~~~~~n~~~~~~ll~a~~----~~~-~~~iV~iSS~~v~g~~------  139 (251)
T PLN00141         84 -------DDSDAVICATGFRRSFDP------FAPWKVDNFGTVNLVEACR----KAG-VTRFILVSSILVNGAA------  139 (251)
T ss_pred             -------cCCCEEEECCCCCcCCCC------CCceeeehHHHHHHHHHHH----HcC-CCEEEEEccccccCCC------
Confidence                   259999999986422111      1235789999988888863    333 4799999998644110      


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHH--hCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN--LGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e--l~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                 .+.+....|...|.+...+...+..|  +.   ..++++++++||++.++..........     ....
T Consensus       140 -----------~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~gi~~~iirpg~~~~~~~~~~~~~~~-----~~~~  200 (251)
T PLN00141        140 -----------MGQILNPAYIFLNLFGLTLVAKLQAEKYIR---KSGINYTIVRPGGLTNDPPTGNIVMEP-----EDTL  200 (251)
T ss_pred             -----------cccccCcchhHHHHHHHHHHHHHHHHHHHH---hcCCcEEEEECCCccCCCCCceEEECC-----CCcc
Confidence                       11112234555554333322222222  33   568999999999998765322100000     0001


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCCC
Q 017580          298 LGLLQSPEKGINSVLDAALAPPE  320 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~~  320 (369)
                      .....+++|+|+.+++++..++.
T Consensus       201 ~~~~i~~~dvA~~~~~~~~~~~~  223 (251)
T PLN00141        201 YEGSISRDQVAEVAVEALLCPES  223 (251)
T ss_pred             ccCcccHHHHHHHHHHHhcChhh
Confidence            11346999999999988776553

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.72  E-value=1.9e-15  Score=141.67  Aligned_cols=178  Identities=16%  Similarity=0.121  Sum_probs=126.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||.+++++|+++|++|++++|...........+..   ..++..+.+|+++.+++.++++.         
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~---------   68 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE---------   68 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh---------
Confidence            379999999999999999999999999887654332222222211   12578889999999988877652         


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCcccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETIT  223 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~~~~  223 (369)
                        .++|++|||||......  +.+...+.+++|+.++..+++++..    .+ .+++|++||...+..... ...+    
T Consensus        69 --~~~d~vv~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~ss~~~~g~~~~~~~~e----  135 (328)
T TIGR01179        69 --HKIDAVIHFAGLIAVGE--SVQDPLKYYRNNVVNTLNLLEAMQQ----TG-VKKFIFSSSAAVYGEPSSIPISE----  135 (328)
T ss_pred             --CCCcEEEECccccCcch--hhcCchhhhhhhHHHHHHHHHHHHh----cC-CCEEEEecchhhcCCCCCCCccc----
Confidence              46999999999753221  2334557789999999999887533    22 369999998655421111 1111    


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                            ..+..+...|+.+|++.+.+++.++++.     .++++..+.|+.+..+
T Consensus       136 ------~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       136 ------DSPLGPINPYGRSKLMSERILRDLSKAD-----PGLSYVILRYFNVAGA  179 (328)
T ss_pred             ------cCCCCCCCchHHHHHHHHHHHHHHHHhc-----cCCCEEEEecCcccCC
Confidence                  1233355689999999999999987652     4788999999887665

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.72  E-value=1.2e-17  Score=150.42  Aligned_cols=225  Identities=17%  Similarity=0.165  Sum_probs=151.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcE----EEEEecCCChHHHHHHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARL----EAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v----~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ||||||+|.||.+++++|++.+. +|++++|++..+-.+..++.+..++.++    ..+.+|+.|.+.+.+++++     
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence            79999999999999999999995 8999999999999999998766555444    3457899999888877663     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                            .++|+++|.|+.-+-  .+-++...+.+++|++|+.++++++..+-     -.++|+||+--+.          
T Consensus        76 ------~~pdiVfHaAA~KhV--pl~E~~p~eav~tNv~GT~nv~~aa~~~~-----v~~~v~ISTDKAv----------  132 (293)
T PF02719_consen   76 ------YKPDIVFHAAALKHV--PLMEDNPFEAVKTNVLGTQNVAEAAIEHG-----VERFVFISTDKAV----------  132 (293)
T ss_dssp             -------T-SEEEE------H--HHHCCCHHHHHHHHCHHHHHHHHHHHHTT------SEEEEEEECGCS----------
T ss_pred             ------cCCCEEEEChhcCCC--ChHHhCHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEccccccC----------
Confidence                  369999999987421  11124557789999999999999987652     3599999996544          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh--
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL--  298 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--  298 (369)
                                   .+.+.||+||...+.++.+.+....   ..+.++.+|.=|.|-..-..-.|-+......  ..|+  
T Consensus       133 -------------~PtnvmGatKrlaE~l~~~~~~~~~---~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~--g~PlTv  194 (293)
T PF02719_consen  133 -------------NPTNVMGATKRLAEKLVQAANQYSG---NSDTKFSSVRFGNVLGSRGSVIPLFKKQIKN--GGPLTV  194 (293)
T ss_dssp             -------------S--SHHHHHHHHHHHHHHHHCCTSS---SS--EEEEEEE-EETTGTTSCHHHHHHHHHT--TSSEEE
T ss_pred             -------------CCCcHHHHHHHHHHHHHHHHhhhCC---CCCcEEEEEEecceecCCCcHHHHHHHHHHc--CCccee
Confidence                         5567899999999999999987765   5678999999998864332223332222111  1111  


Q ss_pred             ------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCc
Q 017580          299 ------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSA  338 (369)
Q Consensus       299 ------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~  338 (369)
                            +.+.|++|+++.++.++....  +|..|.-+-|+++...+
T Consensus       195 T~p~mtRffmti~EAv~Lvl~a~~~~~--~geifvl~mg~~v~I~d  238 (293)
T PF02719_consen  195 TDPDMTRFFMTIEEAVQLVLQAAALAK--GGEIFVLDMGEPVKILD  238 (293)
T ss_dssp             CETT-EEEEE-HHHHHHHHHHHHHH----TTEEEEE---TCEECCC
T ss_pred             CCCCcEEEEecHHHHHHHHHHHHhhCC--CCcEEEecCCCCcCHHH
Confidence                  345799999999997765543  57787777788876444

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.71  E-value=1.7e-15  Score=133.86  Aligned_cols=254  Identities=16%  Similarity=0.122  Sum_probs=173.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +.+|||||.|.||.++++.+.++.-  +|+.++.=.  ...+.+ +.+   ..+.+..+++.|++|.+.+.+++++    
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~---~~~~~~~fv~~DI~D~~~v~~~~~~----   72 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADV---EDSPRYRFVQGDICDRELVDRLFKE----   72 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhh---hcCCCceEEeccccCHHHHHHHHHh----
Confidence            3689999999999999999999874  466665421  112222 222   2256899999999999988888774    


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                             -.+|++||-|+=.+  .+-+.++.+..+++|++|++.++.++..+..+    -|++.||.-.-+...      
T Consensus        73 -------~~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l------  133 (340)
T COG1088          73 -------YQPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDL------  133 (340)
T ss_pred             -------cCCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccc------
Confidence                   25999999997532  35566777888999999999999998777532    489999985544221      


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh-
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-  298 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-  298 (369)
                       ...+..|.+..++.+.++|++|||+..+++++..+.+      |+.++..++.---.|..-  +... .......... 
T Consensus       134 -~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY------glp~~ItrcSNNYGPyqf--pEKl-IP~~I~nal~g  203 (340)
T COG1088         134 -GLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY------GLPATITRCSNNYGPYQF--PEKL-IPLMIINALLG  203 (340)
T ss_pred             -cCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc------CCceEEecCCCCcCCCcC--chhh-hHHHHHHHHcC
Confidence             1112245556899999999999999999999999866      567777777665555432  1111 0001111111 


Q ss_pred             ------------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhccCCcccc
Q 017580          299 ------------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRD  366 (369)
Q Consensus       299 ------------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~~~~~~~  366 (369)
                                  +.+.-++|=++++-..+ .... .|+.|.++++....          --.+-+.+++++++..+..+|
T Consensus       204 ~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl-~kg~-~GE~YNIgg~~E~~----------Nlevv~~i~~~l~~~~~~~~~  271 (340)
T COG1088         204 KPLPVYGDGLQIRDWLYVEDHCRAIDLVL-TKGK-IGETYNIGGGNERT----------NLEVVKTICELLGKDKPDYRD  271 (340)
T ss_pred             CCCceecCCcceeeeEEeHhHHHHHHHHH-hcCc-CCceEEeCCCccch----------HHHHHHHHHHHhCccccchhh
Confidence                        12356889999888433 3333 38899888766553          344667788888877775443

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.69  E-value=1.3e-14  Score=137.94  Aligned_cols=237  Identities=17%  Similarity=0.153  Sum_probs=143.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchH---HHHHHHHHhhcC-----C-CcEEEEEecCCChHH-H-HH
Q 017580           65 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLL---SETMADITSRNK-----D-ARLEAFQVDLSSFQS-V-LK  131 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~---~~~~~~~~~~~~-----~-~~v~~~~~Dls~~~~-i-~~  131 (369)
                      +|+||||||+||.+++++|+++|  ++|+++.|+.+..   +.+.+.+.....     . .++.++.+|++++.- + ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7899999987632   222222222110     1 478999999987531 0 01


Q ss_pred             HHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          132 FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       132 ~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      ....+.         ..+|++||||+.....     ..++..+++|+.++..+++.+...    + ..++|++||.....
T Consensus        81 ~~~~~~---------~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~~a~~~----~-~~~~v~iSS~~v~~  141 (367)
T TIGR01746        81 EWERLA---------ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLRLAASG----R-AKPLHYVSTISVLA  141 (367)
T ss_pred             HHHHHH---------hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHHHHhhC----C-CceEEEEccccccC
Confidence            112221         3599999999976421     235667889999999988876432    2 34699999987663


Q ss_pred             ccccc-CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-ch--hHH
Q 017580          212 VFNAQ-VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VP--SFL  287 (369)
Q Consensus       212 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~--~~~  287 (369)
                      ..... ...+   .. . ..........|+.||.+.+.+++..+       ..+++++++.||.+.++.... ..  ...
T Consensus       142 ~~~~~~~~~~---~~-~-~~~~~~~~~~Y~~sK~~~E~~~~~~~-------~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~  209 (367)
T TIGR01746       142 AIDLSTVTED---DA-I-VTPPPGLAGGYAQSKWVAELLVREAS-------DRGLPVTIVRPGRILGNSYTGAINSSDIL  209 (367)
T ss_pred             CcCCCCcccc---cc-c-cccccccCCChHHHHHHHHHHHHHHH-------hcCCCEEEECCCceeecCCCCCCCchhHH
Confidence            32111 0000   00 0 00111234579999999998887654       347899999999998752211 11  111


Q ss_pred             -HHHHHH-H--HHHh-----hCCCCHHHHHHHHHHHhcCCCC-CcccEEeCCCCc
Q 017580          288 -SLMAFT-V--LKLL-----GLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKGR  332 (369)
Q Consensus       288 -~~~~~~-~--~~~~-----~~~~~~~e~A~~v~~~~l~~~~-~sG~~~~~~~g~  332 (369)
                       ...... .  ..|.     ..+..++++|++++.++..... ..|..|...++.
T Consensus       210 ~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~  264 (367)
T TIGR01746       210 WRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPE  264 (367)
T ss_pred             HHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCC
Confidence             110000 0  0010     1156789999999976654432 225666555443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.69  E-value=5.4e-15  Score=142.23  Aligned_cols=243  Identities=15%  Similarity=0.113  Sum_probs=147.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+.++|+||||+|.||.+++++|+++ |++|++++|+.++......... .....++.++.+|++|.+.+.++++     
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDT-VPWSGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccc-ccCCCCeEEEEcCCCChHHHHHHhh-----
Confidence            44568999999999999999999998 5899999988655433221100 0012368999999999887765543     


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~  218 (369)
                              .+|++||+|+...+.. .. +...+.+..|+.++..+++++..    .+  .++|++||...+..... ..+
T Consensus        86 --------~~d~ViHlAa~~~~~~-~~-~~~~~~~~~n~~gt~~ll~aa~~----~~--~r~v~~SS~~vYg~~~~~~~~  149 (386)
T PLN02427         86 --------MADLTINLAAICTPAD-YN-TRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLP  149 (386)
T ss_pred             --------cCCEEEEcccccChhh-hh-hChHHHHHHHHHHHHHHHHHHHh----cC--CEEEEEeeeeeeCCCcCCCCC
Confidence                    2799999999754321 11 12234567899999988877632    22  59999999765432111 111


Q ss_pred             Cc-ccccc-c---cccc-CC------CchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc----
Q 017580          219 NE-TITGK-F---FLRS-KC------YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE----  282 (369)
Q Consensus       219 ~~-~~~~~-~---~~~~-~~------~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~----  282 (369)
                      .+ ..... .   ..+. .+      ..+...|+.||.+.+.+++..++      ..++.+..+.|+.|..+-...    
T Consensus       150 e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~g~~~~ilR~~~vyGp~~~~~~~~  223 (386)
T PLN02427        150 KDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGA------ENGLEFTIVRPFNWIGPRMDFIPGI  223 (386)
T ss_pred             cccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHh------hcCCceEEecccceeCCCCCccccc
Confidence            00 00000 0   0000 00      01235799999999998877654      357889999999998764211    


Q ss_pred             ------chhHHHHHHHHH--HHHh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017580          283 ------VPSFLSLMAFTV--LKLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  331 (369)
Q Consensus       283 ------~~~~~~~~~~~~--~~~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g  331 (369)
                            .+..........  ..+.         .-+...+|+|++++.++..+....|..|+..++
T Consensus       224 ~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~  289 (386)
T PLN02427        224 DGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNP  289 (386)
T ss_pred             cccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCC
Confidence                  011110000000  0010         125789999999996554333345666666554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.65  E-value=8.1e-15  Score=140.76  Aligned_cols=212  Identities=15%  Similarity=0.065  Sum_probs=139.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHH--HHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE--TMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++++||||+|+||++++++|+++|++|++++|+.++...  ...+....  ..++.++.+|++|.+++.++++.+  
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh--
Confidence            457799999999999999999999999999999998765321  11112111  236789999999999998877642  


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                             ..++|++|||+|.....       ....+++|+.++..+++++.    +.+ -+++|++||....        
T Consensus       134 -------~~~~D~Vi~~aa~~~~~-------~~~~~~vn~~~~~~ll~aa~----~~g-v~r~V~iSS~~v~--------  186 (390)
T PLN02657        134 -------GDPVDVVVSCLASRTGG-------VKDSWKIDYQATKNSLDAGR----EVG-AKHFVLLSAICVQ--------  186 (390)
T ss_pred             -------CCCCcEEEECCccCCCC-------CccchhhHHHHHHHHHHHHH----HcC-CCEEEEEeecccc--------
Confidence                   12699999999853211       12346788888888877753    332 4699999997643        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .   +...|..+|...+...+.     .   ..+++...+.|+.+-.++......   ..........
T Consensus       187 ------------~---p~~~~~~sK~~~E~~l~~-----~---~~gl~~tIlRp~~~~~~~~~~~~~---~~~g~~~~~~  240 (390)
T PLN02657        187 ------------K---PLLEFQRAKLKFEAELQA-----L---DSDFTYSIVRPTAFFKSLGGQVEI---VKDGGPYVMF  240 (390)
T ss_pred             ------------C---cchHHHHHHHHHHHHHHh-----c---cCCCCEEEEccHHHhcccHHHHHh---hccCCceEEe
Confidence                        1   234578899888776543     1   468899999998765433211000   0000000000


Q ss_pred             h-------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017580          299 G-------LLQSPEKGINSVLDAALAPPETSGVYFFGGK  330 (369)
Q Consensus       299 ~-------~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~  330 (369)
                      +       .+.+.+|+|+.++.++..+. ..|+.|...+
T Consensus       241 GdG~~~~~~~I~v~DlA~~i~~~~~~~~-~~~~~~~Igg  278 (390)
T PLN02657        241 GDGKLCACKPISEADLASFIADCVLDES-KINKVLPIGG  278 (390)
T ss_pred             cCCcccccCceeHHHHHHHHHHHHhCcc-ccCCEEEcCC
Confidence            0       13678999999997665433 3355665543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.65  E-value=1.4e-14  Score=129.28  Aligned_cols=221  Identities=17%  Similarity=0.108  Sum_probs=150.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      |+||||+|.||.+++++|.++|..|+.+.|+.........+       .++.++.+|+.|.++++++++..         
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~---------   64 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA---------   64 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH---------
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc---------
Confidence            79999999999999999999999998888876654332222       17899999999999998888863         


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  225 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  225 (369)
                        .+|.+||.|+...  ...+.+.....++.|+.++..+++.+...    + ..++|++||...+... ...        
T Consensus        65 --~~d~vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~i~~sS~~~y~~~-~~~--------  126 (236)
T PF01370_consen   65 --NIDVVIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAAREA----G-VKRFIFLSSASVYGDP-DGE--------  126 (236)
T ss_dssp             --TESEEEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHHH----T-TSEEEEEEEGGGGTSS-SSS--------
T ss_pred             --CceEEEEeecccc--ccccccccccccccccccccccccccccc----c-cccccccccccccccc-ccc--------
Confidence              4999999999753  11223556778889999888888877544    2 2599999996554222 100        


Q ss_pred             cccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc---cccchhHHHHHHHHH-HHHh---
Q 017580          226 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI---MREVPSFLSLMAFTV-LKLL---  298 (369)
Q Consensus       226 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~---~~~~~~~~~~~~~~~-~~~~---  298 (369)
                      .+.+..+..+...|+.+|...+.+++.+.++.      ++++..+.|+.+-.+.   ............... ..+.   
T Consensus       127 ~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~------~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (236)
T PF01370_consen  127 PIDEDSPINPLSPYGASKRAAEELLRDYAKKY------GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIP  200 (236)
T ss_dssp             SBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH------TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEE
T ss_pred             cccccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccchhhHHhhcCCccccc
Confidence            01112334566679999999999999988754      6899999999998776   111111111111110 0000   


Q ss_pred             ------hCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          299 ------GLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       299 ------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                            ..+...+|+|++++.++..+. ..|..|+
T Consensus       201 ~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~yN  234 (236)
T PF01370_consen  201 GDGSQVRDFIHVDDLAEAIVAALENPK-AAGGIYN  234 (236)
T ss_dssp             STSSCEEEEEEHHHHHHHHHHHHHHSC-TTTEEEE
T ss_pred             CCCCCccceEEHHHHHHHHHHHHhCCC-CCCCEEE
Confidence                  113568999999997776666 3344443

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.62  E-value=6.4e-14  Score=130.72  Aligned_cols=226  Identities=15%  Similarity=0.052  Sum_probs=138.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      |+||||+|.||.+++++|.++|+ .|++++|..... .. .++     .  ...+..|+++.+.++.+.+.         
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~-----~--~~~~~~d~~~~~~~~~~~~~---------   62 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL-----A--DLVIADYIDKEDFLDRLEKG---------   62 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh-----h--heeeeccCcchhHHHHHHhh---------
Confidence            68999999999999999999998 788887764321 11 111     1  13466788887666554442         


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                      ...++|++||+|+....    +.++.+..+++|+.++..+++++..    .+  .++|++||...+.........+    
T Consensus        63 ~~~~~D~vvh~A~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~----~~--~~~v~~SS~~vy~~~~~~~~e~----  128 (314)
T TIGR02197        63 AFGKIEAIFHQGACSDT----TETDGEYMMENNYQYSKRLLDWCAE----KG--IPFIYASSAATYGDGEAGFREG----  128 (314)
T ss_pred             ccCCCCEEEECccccCc----cccchHHHHHHHHHHHHHHHHHHHH----hC--CcEEEEccHHhcCCCCCCcccc----
Confidence            13579999999997432    2334577899999999999988643    22  4899999976553221111111    


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc---chh-HHHHHHHHHH---HH
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE---VPS-FLSLMAFTVL---KL  297 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~---~~~-~~~~~~~~~~---~~  297 (369)
                           ..+..+...|+.||.+.+.+++....+.    ..++.+..+.|+.+..+-...   ... ..........   ..
T Consensus       129 -----~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (314)
T TIGR02197       129 -----RELERPLNVYGYSKFLFDQYVRRRVLPE----ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVK  199 (314)
T ss_pred             -----cCcCCCCCHHHHHHHHHHHHHHHHhHhh----ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeE
Confidence                 0112245689999999999987643222    235678888888776553211   101 0000000000   00


Q ss_pred             -------------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          298 -------------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 -------------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                                   ...+...+|+|++++.++..  . .+..|...++.+..
T Consensus       200 ~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~--~-~~~~yni~~~~~~s  247 (314)
T TIGR02197       200 LFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN--G-VSGIFNLGTGRARS  247 (314)
T ss_pred             EecCccccCCCCceeeeEEHHHHHHHHHHHHhc--c-cCceEEcCCCCCcc
Confidence                         01356799999999976654  2 33455555555553

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.62  E-value=7.9e-14  Score=143.33  Aligned_cols=239  Identities=13%  Similarity=0.064  Sum_probs=147.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHC--CCEEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~--G~~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+.++|+||||+|.||++++++|+++  |++|++++|..  +....    +.......++.++.+|++|.+.+..++.  
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   77 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKN----LNPSKSSPNFKFVKGDIASADLVNYLLI--   77 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhh----hhhcccCCCeEEEECCCCChHHHHHHHh--
Confidence            35689999999999999999999998  67899888753  22211    1111113468899999999887655432  


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                               ..++|++||+|+.....  .+.+...+.+++|+.++..+++++...    +.-.++|++||...+......
T Consensus        78 ---------~~~~D~ViHlAa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~vkr~I~~SS~~vyg~~~~~  142 (668)
T PLN02260         78 ---------TEGIDTIMHFAAQTHVD--NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDED  142 (668)
T ss_pred             ---------hcCCCEEEECCCccCch--hhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEcchHHhCCCccc
Confidence                     13599999999975321  122334567899999999998876432    113599999997655322111


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-H
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-L  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~  295 (369)
                      .....      .+..+..+...|+.||.+.+.+++...++.      ++.+.++.|+.|-.+-.........+..... .
T Consensus       143 ~~~~~------~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~------~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g  210 (668)
T PLN02260        143 ADVGN------HEASQLLPTNPYSATKAGAEMLVMAYGRSY------GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQG  210 (668)
T ss_pred             cccCc------cccCCCCCCCCcHHHHHHHHHHHHHHHHHc------CCCEEEECcccccCcCCCcccHHHHHHHHHhCC
Confidence            00000      001223345679999999999998887653      5778899999887654321100000000000 0


Q ss_pred             HHh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          296 KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       296 ~~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      .++         ..+...+|+|++++.++ .... .|..|+..+++..
T Consensus       211 ~~i~i~g~g~~~r~~ihV~Dva~a~~~~l-~~~~-~~~vyni~~~~~~  256 (668)
T PLN02260        211 KPLPIHGDGSNVRSYLYCEDVAEAFEVVL-HKGE-VGHVYNIGTKKER  256 (668)
T ss_pred             CCeEEecCCCceEeeEEHHHHHHHHHHHH-hcCC-CCCEEEECCCCee
Confidence            000         12467999999998544 3222 3445555544544

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.62  E-value=7.7e-14  Score=130.02  Aligned_cols=226  Identities=15%  Similarity=0.084  Sum_probs=137.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      |+||||+|.||++++++|+++|++++++.|+.......            .....+|+.|..+...+.+++.+.    ..
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~----~~   65 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAG----DD   65 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcc----cc
Confidence            79999999999999999999999777766654332110            012345777665555555544320    02


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  225 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  225 (369)
                      ++++|++||+||..... ..+   .+..+++|+.++..+++++..    .+  .++|++||...+.........      
T Consensus        66 ~~~~d~Vih~A~~~~~~-~~~---~~~~~~~n~~~t~~ll~~~~~----~~--~~~i~~SS~~vyg~~~~~~~~------  129 (308)
T PRK11150         66 FGDIEAIFHEGACSSTT-EWD---GKYMMDNNYQYSKELLHYCLE----RE--IPFLYASSAATYGGRTDDFIE------  129 (308)
T ss_pred             cCCccEEEECceecCCc-CCC---hHHHHHHHHHHHHHHHHHHHH----cC--CcEEEEcchHHhCcCCCCCCc------
Confidence            35799999999864332 222   245789999999999888643    23  479999998755321111000      


Q ss_pred             cccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc---chhHHHHHHHHHH---HH--
Q 017580          226 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE---VPSFLSLMAFTVL---KL--  297 (369)
Q Consensus       226 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~---~~--  297 (369)
                         +..+..+...|+.||.+.+.+++.++.+      .++.+..+.|+.+-.+-...   .+...........   .+  
T Consensus       130 ---E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i  200 (308)
T PRK11150        130 ---EREYEKPLNVYGYSKFLFDEYVRQILPE------ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKL  200 (308)
T ss_pred             ---cCCCCCCCCHHHHHHHHHHHHHHHHHHH------cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEE
Confidence               1123334567999999999988877653      36788899998887654321   1111100000000   00  


Q ss_pred             -------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          298 -------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 -------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                             .+-+...+|+|++++.++- .+ .+| .|+..+++...
T Consensus       201 ~~g~~~~~r~~i~v~D~a~a~~~~~~-~~-~~~-~yni~~~~~~s  242 (308)
T PRK11150        201 FEGSENFKRDFVYVGDVAAVNLWFWE-NG-VSG-IFNCGTGRAES  242 (308)
T ss_pred             ecCCCceeeeeeeHHHHHHHHHHHHh-cC-CCC-eEEcCCCCcee
Confidence                   1124689999999885543 22 234 66666666554

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.62  E-value=6.3e-14  Score=129.14  Aligned_cols=221  Identities=15%  Similarity=0.091  Sum_probs=140.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      ++||||+|.||.+++++|.++|++|++++|+                       .+|+.+.++++++++.          
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~----------   48 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRA----------   48 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHh----------
Confidence            7999999999999999999999999999884                       4799999888777653          


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCccccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNETITG  224 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~~~~~  224 (369)
                       ..+|++||+||.....  ......+..+++|+.++..+++++..    .+  .++|++||...+.... .++..+    
T Consensus        49 -~~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~E~----  115 (287)
T TIGR01214        49 -IRPDAVVNTAAYTDVD--GAESDPEKAFAVNALAPQNLARAAAR----HG--ARLVHISTDYVFDGEGKRPYRED----  115 (287)
T ss_pred             -CCCCEEEECCcccccc--ccccCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEeeeeeecCCCCCCCCCC----
Confidence             2489999999975321  12233567889999999999888643    22  4899999976542211 111111    


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-cchh-HHHHHHHH-HHH----H
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-EVPS-FLSLMAFT-VLK----L  297 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~-~~~~-~~~~~~~~-~~~----~  297 (369)
                            .+..+...|+.+|.+.+.+++.+          +..+..+.|+.+..+... .... ........ ...    .
T Consensus       116 ------~~~~~~~~Y~~~K~~~E~~~~~~----------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (287)
T TIGR01214       116 ------DATNPLNVYGQSKLAGEQAIRAA----------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQ  179 (287)
T ss_pred             ------CCCCCcchhhHHHHHHHHHHHHh----------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCC
Confidence                  22334568999999998877654          235788999998766531 1111 00000000 000    0


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          298 LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      ...+...+|+|++++.++...+..+|.|-.. ++.++.          ..++++...+.++.
T Consensus       180 ~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~-~~~~~s----------~~e~~~~i~~~~~~  230 (287)
T TIGR01214       180 IGSPTYAKDLARVIAALLQRLARARGVYHLA-NSGQCS----------WYEFAQAIFEEAGA  230 (287)
T ss_pred             CcCCcCHHHHHHHHHHHHhhccCCCCeEEEE-CCCCcC----------HHHHHHHHHHHhCc
Confidence            1123568999999997665433444555443 333333          33455555555544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.59  E-value=4.5e-13  Score=127.02  Aligned_cols=230  Identities=9%  Similarity=0.094  Sum_probs=141.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCC-ChHHHHHHHHHHHHHHh
Q 017580           64 PVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS-SFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls-~~~~i~~~~~~i~~~~~  141 (369)
                      ++|+||||+|.||.+++++|+++ |++|++++|+.+....    +   .+...+.++.+|++ +.+.+.+++        
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~---~~~~~~~~~~~Dl~~~~~~~~~~~--------   66 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----L---VNHPRMHFFEGDITINKEWIEYHV--------   66 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----h---ccCCCeEEEeCCCCCCHHHHHHHH--------
Confidence            46999999999999999999986 6999999987543221    1   11345889999998 555443322        


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNE  220 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~  220 (369)
                           .++|++||.|+...+..  ..++.+..+++|+.++.++++++..    .+  .++|++||...+..... .+..+
T Consensus        67 -----~~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~----~~--~~~v~~SS~~vyg~~~~~~~~ee  133 (347)
T PRK11908         67 -----KKCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVK----YG--KHLVFPSTSEVYGMCPDEEFDPE  133 (347)
T ss_pred             -----cCCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHh----cC--CeEEEEecceeeccCCCcCcCcc
Confidence                 24899999999753321  1233457789999999988877642    22  59999999865532111 11111


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hh-HHHHHHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PS-FLSLMAF  292 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-------~~-~~~~~~~  292 (369)
                      . ....+.  ...++...|+.||.+.+.+++.++.+      .++.+..+.|+.+..+-....       .. .......
T Consensus       134 ~-~~~~~~--~~~~p~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~  204 (347)
T PRK11908        134 A-SPLVYG--PINKPRWIYACSKQLMDRVIWAYGME------EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGH  204 (347)
T ss_pred             c-cccccC--cCCCccchHHHHHHHHHHHHHHHHHH------cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHH
Confidence            0 000000  01123457999999999999888754      356788888887765532110       00 0011100


Q ss_pred             HH-HH---------HhhCCCCHHHHHHHHHHHhcCCCC-CcccEEeCCC
Q 017580          293 TV-LK---------LLGLLQSPEKGINSVLDAALAPPE-TSGVYFFGGK  330 (369)
Q Consensus       293 ~~-~~---------~~~~~~~~~e~A~~v~~~~l~~~~-~sG~~~~~~~  330 (369)
                      .. ..         ..+.+...+|+|++++.++...+. ..|..|+...
T Consensus       205 ~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~  253 (347)
T PRK11908        205 IVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGN  253 (347)
T ss_pred             HhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCC
Confidence            00 00         011367899999999976654432 4466665543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.57  E-value=5.7e-13  Score=127.33  Aligned_cols=182  Identities=14%  Similarity=0.059  Sum_probs=122.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++|+||||+|.||.+++++|.++|++|++++|.....      ....  ...+.++.+|+++.+++.++++       
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~--~~~~~~~~~Dl~d~~~~~~~~~-------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED--MFCHEFHLVDLRVMENCLKVTK-------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc--cccceEEECCCCCHHHHHHHHh-------
Confidence            468999999999999999999999999999999864321      0000  1124678899999876654432       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                            .+|++||.|+....... ........+..|+.++.++++++...    + -.++|++||...+...........
T Consensus        85 ------~~D~Vih~Aa~~~~~~~-~~~~~~~~~~~N~~~t~nll~aa~~~----~-vk~~V~~SS~~vYg~~~~~~~~~~  152 (370)
T PLN02695         85 ------GVDHVFNLAADMGGMGF-IQSNHSVIMYNNTMISFNMLEAARIN----G-VKRFFYASSACIYPEFKQLETNVS  152 (370)
T ss_pred             ------CCCEEEEcccccCCccc-cccCchhhHHHHHHHHHHHHHHHHHh----C-CCEEEEeCchhhcCCccccCcCCC
Confidence                  37999999986532111 11123455778999999998876432    2 359999999765532111000000


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                      ...   ....+..+.+.|+.+|.+.+.+++..+..      .++.+..+.|+.+-.|-
T Consensus       153 ~~E---~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~------~g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        153 LKE---SDAWPAEPQDAYGLEKLATEELCKHYTKD------FGIECRIGRFHNIYGPF  201 (370)
T ss_pred             cCc---ccCCCCCCCCHHHHHHHHHHHHHHHHHHH------hCCCEEEEEECCccCCC
Confidence            000   00124455678999999999999887654      46889999999888764

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.56  E-value=7.3e-13  Score=123.42  Aligned_cols=222  Identities=17%  Similarity=0.094  Sum_probs=143.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      |+||||+|.||.+++++|.++|++|+.++|.........         ..+.++.+|+++.+.+.+..+.          
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~----------   63 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKG----------   63 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhc----------
Confidence            999999999999999999999999999999766433221         3568889999998544433331          


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc-cc-cCCCcccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF-NA-QVNNETIT  223 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~-~~-~~~~~~~~  223 (369)
                       .. |++||+|+.......... ..+..+.+|+.++..+++++..    .+ ..++|+.||.+..... .. ..+.+.  
T Consensus        64 -~~-d~vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~----~~-~~~~v~~ss~~~~~~~~~~~~~~E~~--  133 (314)
T COG0451          64 -VP-DAVIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARA----AG-VKRFVFASSVSVVYGDPPPLPIDEDL--  133 (314)
T ss_pred             -CC-CEEEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCCCceECCCCCCCCccccc--
Confidence             11 999999998644333222 4567899999999999998765    22 4689996665544322 11 111110  


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hh--HHHHH-HHHHHHH--
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PS--FLSLM-AFTVLKL--  297 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~--~~~~~-~~~~~~~--  297 (369)
                             .+..+...|+.||.+.+.+++..+.+      .++.+.++.|+.+-.+..... +.  ..... ......+  
T Consensus       134 -------~~~~p~~~Yg~sK~~~E~~~~~~~~~------~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~  200 (314)
T COG0451         134 -------GPPRPLNPYGVSKLAAEQLLRAYARL------YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPII  200 (314)
T ss_pred             -------CCCCCCCHHHHHHHHHHHHHHHHHHH------hCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcc
Confidence                   11222228999999999999988872      468899999998876554332 11  11101 0111111  


Q ss_pred             -hh-------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          298 -LG-------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       298 -~~-------~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                       ..       .+...+|+|++++.++-.+...   .|+...+.
T Consensus       201 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~---~~ni~~~~  240 (314)
T COG0451         201 VIGGDGSQTRDFVYVDDVADALLLALENPDGG---VFNIGSGT  240 (314)
T ss_pred             eEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc---EEEeCCCC
Confidence             10       1456899999999655444332   55555554

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.56  E-value=9.7e-13  Score=134.81  Aligned_cols=236  Identities=11%  Similarity=0.074  Sum_probs=148.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHH-HHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSL  136 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~-i~~~~~~i  136 (369)
                      +-.++++|+||||+|.||.+++++|+++ |++|++++|+.......       ....+++++.+|++|.++ +++++   
T Consensus       311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~-------~~~~~~~~~~gDl~d~~~~l~~~l---  380 (660)
T PRK08125        311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF-------LGHPRFHFVEGDISIHSEWIEYHI---  380 (660)
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh-------cCCCceEEEeccccCcHHHHHHHh---
Confidence            3456789999999999999999999986 79999999976432211       112468889999998654 22221   


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-  215 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-  215 (369)
                                ..+|++||.|+...+...  .+..+..+++|+.++..+++++...    +  .++|++||...+..... 
T Consensus       381 ----------~~~D~ViHlAa~~~~~~~--~~~~~~~~~~Nv~~t~~ll~a~~~~----~--~~~V~~SS~~vyg~~~~~  442 (660)
T PRK08125        381 ----------KKCDVVLPLVAIATPIEY--TRNPLRVFELDFEENLKIIRYCVKY----N--KRIIFPSTSEVYGMCTDK  442 (660)
T ss_pred             ----------cCCCEEEECccccCchhh--ccCHHHHHHhhHHHHHHHHHHHHhc----C--CeEEEEcchhhcCCCCCC
Confidence                      248999999997653211  1233567899999999998887542    2  48999999765532111 


Q ss_pred             cCCCcccccccccccCC-CchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--------hhH
Q 017580          216 QVNNETITGKFFLRSKC-YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--------PSF  286 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~-~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--------~~~  286 (369)
                      .++++....    ...+ ..+...|+.||.+.+.+++..+++      .++++..+.|+.+..|-....        ...
T Consensus       443 ~~~E~~~~~----~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~------~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i  512 (660)
T PRK08125        443 YFDEDTSNL----IVGPINKQRWIYSVSKQLLDRVIWAYGEK------EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAI  512 (660)
T ss_pred             CcCcccccc----ccCCCCCCccchHHHHHHHHHHHHHHHHh------cCCceEEEEEceeeCCCccccccccccccchH
Confidence            111110000    0011 123457999999999999888764      368899999998876643211        000


Q ss_pred             HHHHHHHH-HHH---------hhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          287 LSLMAFTV-LKL---------LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       287 ~~~~~~~~-~~~---------~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      ........ ..+         .+-+...+|+|++++.++...+ ...|..|+..++.
T Consensus       513 ~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        513 TQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             HHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            01000000 001         1125689999999986654432 2346667666553

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.55  E-value=3.4e-12  Score=124.29  Aligned_cols=231  Identities=15%  Similarity=0.051  Sum_probs=141.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++|+||||+|.||.+++++|+++|++|++++|......+   .+.......++.++..|+.+..        +     
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~~~~~~~i~~D~~~~~--------l-----  181 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFSNPNFELIRHDVVEPI--------L-----  181 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhccCCceEEEECCccChh--------h-----
Confidence            46789999999999999999999999999999876432211   1111112346788888987642        1     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                           ..+|+|||.|+...+..  ..+..++.+++|+.++..+++++...    +  .++|++||...+.........++
T Consensus       182 -----~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~~----g--~r~V~~SS~~VYg~~~~~p~~E~  248 (442)
T PLN02206        182 -----LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQVET  248 (442)
T ss_pred             -----cCCCEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHHh----C--CEEEEECChHHhCCCCCCCCCcc
Confidence                 13899999998754321  11234678999999999999886432    2  48999999865532211111111


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHHHHHHHHH-HHH-
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLMAFTV-LKL-  297 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~-~~~-  297 (369)
                      .    .....+......|+.||.+.+.+++.+.++.      ++.+..+.|+.+..+.....  ........... ..+ 
T Consensus       249 ~----~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~------g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i  318 (442)
T PLN02206        249 Y----WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA------NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPL  318 (442)
T ss_pred             c----cccCCCCCccchHHHHHHHHHHHHHHHHHHh------CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCc
Confidence            0    0001233446789999999999888776543      57788888877765532110  00001110000 000 


Q ss_pred             --------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          298 --------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       298 --------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                              ..-+...+|+|++++.++. .+ ..| .|+..++..+
T Consensus       319 ~i~g~G~~~rdfi~V~Dva~ai~~a~e-~~-~~g-~yNIgs~~~~  360 (442)
T PLN02206        319 TVYGDGKQTRSFQFVSDLVEGLMRLME-GE-HVG-PFNLGNPGEF  360 (442)
T ss_pred             EEeCCCCEEEeEEeHHHHHHHHHHHHh-cC-CCc-eEEEcCCCce
Confidence                    0124679999999986553 22 334 4555545544

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.52  E-value=6.4e-13  Score=118.15  Aligned_cols=158  Identities=13%  Similarity=0.140  Sum_probs=118.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      ++|||||.|-||.+++.+|++.|++|++++.-...-.+.....       ...+++.|+.|.+-+++++++         
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~---------   65 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEE---------   65 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHh---------
Confidence            6999999999999999999999999999998655444443322       168999999999988887775         


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCcccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNETIT  223 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~~~~  223 (369)
                        .++|.+||-||...-  ..|.+..-+.++-|+.|+..|++++...    + -.+|||-||.+-+..+. .++.++   
T Consensus        66 --~~idaViHFAa~~~V--gESv~~Pl~Yy~NNv~gTl~Ll~am~~~----g-v~~~vFSStAavYG~p~~~PI~E~---  133 (329)
T COG1087          66 --NKIDAVVHFAASISV--GESVQNPLKYYDNNVVGTLNLIEAMLQT----G-VKKFIFSSTAAVYGEPTTSPISET---  133 (329)
T ss_pred             --cCCCEEEECcccccc--chhhhCHHHHHhhchHhHHHHHHHHHHh----C-CCEEEEecchhhcCCCCCcccCCC---
Confidence              469999999996421  1234555677999999999999886544    2 35777777765553322 122222   


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHh
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL  257 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el  257 (369)
                             .+..+..+|+.||.+.+.+.+.+++-.
T Consensus       134 -------~~~~p~NPYG~sKlm~E~iL~d~~~a~  160 (329)
T COG1087         134 -------SPLAPINPYGRSKLMSEEILRDAAKAN  160 (329)
T ss_pred             -------CCCCCCCcchhHHHHHHHHHHHHHHhC
Confidence                   555677799999999999999998754

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.51  E-value=4.1e-12  Score=123.53  Aligned_cols=230  Identities=14%  Similarity=0.045  Sum_probs=141.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ..+|+||||+|.||.+++++|+++|++|++++|...........+   ....++.++..|+.+..        +      
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~--------~------  182 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI--------L------  182 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc--------c------
Confidence            457999999999999999999999999999998643211111111   11346778888886532        1      


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCcc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNET  221 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~~  221 (369)
                          .++|+|||.|+...+...  ....+..+++|+.++..+++++...    +  .++|++||...+..... +...+.
T Consensus       183 ----~~~D~ViHlAa~~~~~~~--~~~p~~~~~~Nv~gT~nLleaa~~~----g--~r~V~~SS~~VYg~~~~~p~~E~~  250 (436)
T PLN02166        183 ----LEVDQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLEHPQKETY  250 (436)
T ss_pred             ----cCCCEEEECceeccchhh--ccCHHHHHHHHHHHHHHHHHHHHHh----C--CEEEEECcHHHhCCCCCCCCCccc
Confidence                248999999987543221  1234678999999999998886532    2  48999999765532211 111110


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chh-HHHHHHHHH-HHH-
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPS-FLSLMAFTV-LKL-  297 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~-~~~~~~~~~-~~~-  297 (369)
                      .     ....+..+...|+.||.+.+.+++...+.      .++.+..+.|+.+-.+-... ... ...+..... ..+ 
T Consensus       251 ~-----~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~------~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i  319 (436)
T PLN02166        251 W-----GNVNPIGERSCYDEGKRTAETLAMDYHRG------AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPM  319 (436)
T ss_pred             c-----ccCCCCCCCCchHHHHHHHHHHHHHHHHH------hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCc
Confidence            0     00123344568999999999999887654      35778888888776653211 000 000100000 000 


Q ss_pred             --------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          298 --------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 --------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                              ..-+...+|+|++++.++. .+ ..| .|+.+.+..+.
T Consensus       320 ~v~g~g~~~rdfi~V~Dva~ai~~~~~-~~-~~g-iyNIgs~~~~S  362 (436)
T PLN02166        320 TVYGDGKQTRSFQYVSDLVDGLVALME-GE-HVG-PFNLGNPGEFT  362 (436)
T ss_pred             EEeCCCCeEEeeEEHHHHHHHHHHHHh-cC-CCc-eEEeCCCCcEe
Confidence                    1125689999999986553 22 335 45555555443

>PLN02996 fatty acyl-CoA reductase

Probab=99.50  E-value=2.6e-12  Score=126.76  Aligned_cols=244  Identities=15%  Similarity=0.184  Sum_probs=144.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC---CEEEEEeCCcch---HHHHHHHH---------HhhcC-------CCcEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSHL---LSETMADI---------TSRNK-------DARLEA  118 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G---~~Vvl~~r~~~~---~~~~~~~~---------~~~~~-------~~~v~~  118 (369)
                      ++||+|+||||||.||+.++++|++.+   .+|++..|....   .+.+..++         .+..+       ..++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            468999999999999999999999865   268898886532   22221121         11111       157899


Q ss_pred             EEecCCChH----HHHHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhc
Q 017580          119 FQVDLSSFQ----SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN  194 (369)
Q Consensus       119 ~~~Dls~~~----~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~  194 (369)
                      +..|+++++    + ....+++.         ..+|++||+|+.....     +..+..+++|+.|+..+++.+...-  
T Consensus        89 i~GDl~~~~LGLs~-~~~~~~l~---------~~vD~ViH~AA~v~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~--  151 (491)
T PLN02996         89 VPGDISYDDLGVKD-SNLREEMW---------KEIDIVVNLAATTNFD-----ERYDVALGINTLGALNVLNFAKKCV--  151 (491)
T ss_pred             EecccCCcCCCCCh-HHHHHHHH---------hCCCEEEECccccCCc-----CCHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            999998432    1 11122222         2489999999976421     3457789999999999988764421  


Q ss_pred             CCCCCeEEEEcCCcccccccccC-----CCcc---------cc-------------------ccc---------ccccCC
Q 017580          195 SPVPSRIVNVTSFTHRNVFNAQV-----NNET---------IT-------------------GKF---------FLRSKC  232 (369)
Q Consensus       195 ~~~~g~IV~vsS~~~~~~~~~~~-----~~~~---------~~-------------------~~~---------~~~~~~  232 (369)
                       + -.++|++||...+......+     +.+.         .+                   ...         ..+...
T Consensus       152 -~-~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        152 -K-VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             -C-CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence             1 35899999977653321111     1000         00                   000         000001


Q ss_pred             CchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH----HH----HHHHH-------
Q 017580          233 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM----AF----TVLKL-------  297 (369)
Q Consensus       233 ~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~----~~----~~~~~-------  297 (369)
                      ...-..|+.||++.+.+++..+        .++.+.++.|..|-.+.....+.+....    ..    .....       
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~~--------~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg  301 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNFK--------ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADP  301 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHhc--------CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCC
Confidence            1112369999999999886432        3688999999999776654433322111    00    00000       


Q ss_pred             --hhCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCC
Q 017580          298 --LGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKG  331 (369)
Q Consensus       298 --~~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~~~g  331 (369)
                        ..-+..+++++++++-++...  ....+..|+.+.|
T Consensus       302 ~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        302 NSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             CeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence              112467899999988554432  1224566766655

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.49  E-value=2.3e-12  Score=119.66  Aligned_cols=156  Identities=13%  Similarity=0.030  Sum_probs=110.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      ++|||||+|.||.+++++|+++| +|+.++|...                   .+..|++|.+++.++++.         
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~---------   52 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRK---------   52 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHh---------
Confidence            59999999999999999999999 7888887521                   235799999988776663         


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCcccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETIT  223 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~~~~  223 (369)
                        .++|++||+|+.....  ...+..+..+++|+.++..+++++...      +.++|++||...+..... +...    
T Consensus        53 --~~~D~Vih~Aa~~~~~--~~~~~~~~~~~~N~~~~~~l~~aa~~~------g~~~v~~Ss~~Vy~~~~~~p~~E----  118 (299)
T PRK09987         53 --IRPDVIVNAAAHTAVD--KAESEPEFAQLLNATSVEAIAKAANEV------GAWVVHYSTDYVFPGTGDIPWQE----  118 (299)
T ss_pred             --cCCCEEEECCccCCcc--hhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEccceEECCCCCCCcCC----
Confidence              2489999999976431  122334667889999999998876432      258999999765432211 1111    


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                            ..+..+...|+.||.+.+.+++...       .   ....+.|+++-.|-
T Consensus       119 ------~~~~~P~~~Yg~sK~~~E~~~~~~~-------~---~~~ilR~~~vyGp~  158 (299)
T PRK09987        119 ------TDATAPLNVYGETKLAGEKALQEHC-------A---KHLIFRTSWVYAGK  158 (299)
T ss_pred             ------CCCCCCCCHHHHHHHHHHHHHHHhC-------C---CEEEEecceecCCC
Confidence                  1344456689999999988876542       1   23667787777653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.49  E-value=2.4e-12  Score=119.66  Aligned_cols=216  Identities=13%  Similarity=0.058  Sum_probs=134.1

Q ss_pred             EEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCCC
Q 017580           67 IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH  146 (369)
Q Consensus        67 lITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~~  146 (369)
                      +||||+|.||.++++.|+++|++|+++.+.                      ..+|+++.+++.++++.           
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~-----------   47 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAK-----------   47 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhc-----------
Confidence            699999999999999999999987765432                      14899998887776553           


Q ss_pred             CCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCcccccc
Q 017580          147 SSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNETITGK  225 (369)
Q Consensus       147 ~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~~~~~~  225 (369)
                      .++|++||+|+....... ..+..+..+++|+.++..+++.+...    + -.++|++||..-+.... .+.+.+.... 
T Consensus        48 ~~~d~Vih~A~~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~-  120 (306)
T PLN02725         48 EKPTYVILAAAKVGGIHA-NMTYPADFIRENLQIQTNVIDAAYRH----G-VKKLLFLGSSCIYPKFAPQPIPETALLT-  120 (306)
T ss_pred             cCCCEEEEeeeeecccch-hhhCcHHHHHHHhHHHHHHHHHHHHc----C-CCeEEEeCceeecCCCCCCCCCHHHhcc-
Confidence            247999999997532111 11233467889999999998887543    2 35999999976442211 1111111000 


Q ss_pred             cccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-------chhHHHHH-HHH-HH-
Q 017580          226 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-------VPSFLSLM-AFT-VL-  295 (369)
Q Consensus       226 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-------~~~~~~~~-~~~-~~-  295 (369)
                          ....|....|+.||.+.+.+++.+.++.      ++++.++.|+.+-.+-...       .+...... ... .. 
T Consensus       121 ----~~~~p~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~  190 (306)
T PLN02725        121 ----GPPEPTNEWYAIAKIAGIKMCQAYRIQY------GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGA  190 (306)
T ss_pred             ----CCCCCCcchHHHHHHHHHHHHHHHHHHh------CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCC
Confidence                0111223459999999999888876543      6789999999887664210       11111100 000 00 


Q ss_pred             ---------HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          296 ---------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       296 ---------~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                               .....+..++|++++++.++... ...+.| +..++...
T Consensus       191 ~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~-~~~~~~-ni~~~~~~  236 (306)
T PLN02725        191 PEVVVWGSGSPLREFLHVDDLADAVVFLMRRY-SGAEHV-NVGSGDEV  236 (306)
T ss_pred             CeEEEcCCCCeeeccccHHHHHHHHHHHHhcc-ccCcce-EeCCCCcc
Confidence                     00124578999999999665432 223444 54544444

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.48  E-value=1.1e-12  Score=122.88  Aligned_cols=201  Identities=12%  Similarity=0.021  Sum_probs=128.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||||.||++++++|+++|++|++++|+.++...    +.    ...+.++.+|++|++++.++++          
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~----~~~v~~v~~Dl~d~~~l~~al~----------   63 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK----EWGAELVYGDLSLPETLPPSFK----------   63 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh----hcCCEEEECCCCCHHHHHHHHC----------
Confidence            59999999999999999999999999999998654322    11    2257899999999988765443          


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                         ++|++||.++...       .+.....++|+.++.++++++..    .+ -.|+|++||..+..             
T Consensus        64 ---g~d~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~----~g-vkr~I~~Ss~~~~~-------------  115 (317)
T CHL00194         64 ---GVTAIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKA----AK-IKRFIFFSILNAEQ-------------  115 (317)
T ss_pred             ---CCCEEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHH----cC-CCEEEEeccccccc-------------
Confidence               3899999876431       12234677898888888777643    22 35999999854320             


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH------HHh
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL------KLL  298 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~------~~~  298 (369)
                            .   +...|..+|...+.+.+          ..++.++.+.|+.+..++......  ........      .+ 
T Consensus       116 ------~---~~~~~~~~K~~~e~~l~----------~~~l~~tilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-  173 (317)
T CHL00194        116 ------Y---PYIPLMKLKSDIEQKLK----------KSGIPYTIFRLAGFFQGLISQYAI--PILEKQPIWITNESTP-  173 (317)
T ss_pred             ------c---CCChHHHHHHHHHHHHH----------HcCCCeEEEeecHHhhhhhhhhhh--hhccCCceEecCCCCc-
Confidence                  1   12357788887765542          246778889998653322111000  00000000      00 


Q ss_pred             hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          299 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      ..+.+.+|+|+.++.++..+ ...|+.|...++++.
T Consensus       174 ~~~i~v~Dva~~~~~~l~~~-~~~~~~~ni~g~~~~  208 (317)
T CHL00194        174 ISYIDTQDAAKFCLKSLSLP-ETKNKTFPLVGPKSW  208 (317)
T ss_pred             cCccCHHHHHHHHHHHhcCc-cccCcEEEecCCCcc
Confidence            02356799999998665443 334666666655544

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2e-11  Score=125.59  Aligned_cols=232  Identities=14%  Similarity=0.061  Sum_probs=139.9

Q ss_pred             EEEEeCCCCchHHHHHHHHH--HCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHH--HHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALS--REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSV--LKFKDSLQQWL  140 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La--~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i--~~~~~~i~~~~  140 (369)
                      +|+||||+|.||.+++++|+  .+|++|++++|+... ... ..+.......++.++..|+++++..  ....+++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRL-EALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHH-HHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            59999999999999999999  589999999997532 222 1222222225789999999985421  1111111    


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                            ..+|++||+||.....     ...+...++|+.++..+++.+..    .+ ..++|++||...+........++
T Consensus        76 ------~~~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~----~~-~~~~v~~SS~~v~g~~~~~~~e~  139 (657)
T PRK07201         76 ------GDIDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAER----LQ-AATFHHVSSIAVAGDYEGVFRED  139 (657)
T ss_pred             ------cCCCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHHh----cC-CCeEEEEeccccccCccCccccc
Confidence                  3589999999975321     12355678999999888877543    22 36999999987653222211111


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc----cchhHHH---HHHHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR----EVPSFLS---LMAFT  293 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~----~~~~~~~---~~~~~  293 (369)
                      ...       .+......|+.||.+.+.+++.         ..++.+..+.|+.|..+-..    .......   .....
T Consensus       140 ~~~-------~~~~~~~~Y~~sK~~~E~~~~~---------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~  203 (657)
T PRK07201        140 DFD-------EGQGLPTPYHRTKFEAEKLVRE---------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKL  203 (657)
T ss_pred             cch-------hhcCCCCchHHHHHHHHHHHHH---------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHh
Confidence            100       1122335799999999887742         24688999999998654211    1111000   00000


Q ss_pred             HH----HHh-------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          294 VL----KLL-------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       294 ~~----~~~-------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      ..    .+.       ..+...+|+|+++..++. .+...|+.|+..+++++.
T Consensus       204 ~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~-~~~~~g~~~ni~~~~~~s  255 (657)
T PRK07201        204 AKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH-KDGRDGQTFHLTDPKPQR  255 (657)
T ss_pred             ccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc-CcCCCCCEEEeCCCCCCc
Confidence            00    000       023568999999986543 334456666655555443

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.43  E-value=1.7e-12  Score=117.34  Aligned_cols=182  Identities=18%  Similarity=0.158  Sum_probs=102.2

Q ss_pred             EeCCCCchHHHHHHHHHHCCC--EEEEEeCCcch---HHHHHHHHHhhc--------CCCcEEEEEecCCChH-HH-HHH
Q 017580           68 VTGATSGLGAAAAYALSREGF--HVVLVGRSSHL---LSETMADITSRN--------KDARLEAFQVDLSSFQ-SV-LKF  132 (369)
Q Consensus        68 ITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~---~~~~~~~~~~~~--------~~~~v~~~~~Dls~~~-~i-~~~  132 (369)
                      ||||||.||.++.++|++++.  +|++..|..+.   .+.+.+.+.+..        ...+++++..|++++. .+ .+-
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  99999997643   222222222111        1568999999999864 11 111


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      .+++.+         .+|++||||+......     .+++..++|+.|+..+++.+..    .+ ..++++||| +....
T Consensus        81 ~~~L~~---------~v~~IiH~Aa~v~~~~-----~~~~~~~~NV~gt~~ll~la~~----~~-~~~~~~iST-a~v~~  140 (249)
T PF07993_consen   81 YQELAE---------EVDVIIHCAASVNFNA-----PYSELRAVNVDGTRNLLRLAAQ----GK-RKRFHYIST-AYVAG  140 (249)
T ss_dssp             HHHHHH---------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTS----SS----EEEEEE-GGGTT
T ss_pred             hhcccc---------ccceeeecchhhhhcc-----cchhhhhhHHHHHHHHHHHHHh----cc-CcceEEecc-ccccC
Confidence            222322         3899999999764322     3456889999999999988752    22 349999999 33322


Q ss_pred             c-cccCCCcc--cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccC
Q 017580          213 F-NAQVNNET--ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  277 (369)
Q Consensus       213 ~-~~~~~~~~--~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T  277 (369)
                      . ........  ......  .........|..||...+.+++..+.+.      |+.+..+.||.|-.
T Consensus       141 ~~~~~~~~~~~~~~~~~~--~~~~~~~~gY~~SK~~aE~~l~~a~~~~------g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDL--DPPQGFPNGYEQSKWVAERLLREAAQRH------GLPVTIYRPGIIVG  200 (249)
T ss_dssp             S-TTT--SSS-HHH--EE--E--TTSEE-HHHHHHHHHHHHHHHHHHH---------EEEEEE-EEE-
T ss_pred             CCCCcccccccccccccc--hhhccCCccHHHHHHHHHHHHHHHHhcC------CceEEEEecCcccc
Confidence            2 11111100  001011  1222334589999999999999888753      57799999999865

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.41  E-value=2e-11  Score=113.50  Aligned_cols=237  Identities=18%  Similarity=0.137  Sum_probs=147.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++.+++||||+|.+|++++.+|.++|  .+|.+++..+....- .++.... ....+.++.+|+.+..++...++     
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~-~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNL-PAELTGF-RSGRVTVILGDLLDANSISNAFQ-----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccccc-chhhhcc-cCCceeEEecchhhhhhhhhhcc-----
Confidence            46899999999999999999999999  689999887642111 1111111 25688999999999887766544     


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                              +. .+||+|....  +..-..+-+..+++|+.|+-+++..+...    + -.++|++||..-......-.+.
T Consensus        76 --------~~-~Vvh~aa~~~--~~~~~~~~~~~~~vNV~gT~nvi~~c~~~----~-v~~lIYtSs~~Vvf~g~~~~n~  139 (361)
T KOG1430|consen   76 --------GA-VVVHCAASPV--PDFVENDRDLAMRVNVNGTLNVIEACKEL----G-VKRLIYTSSAYVVFGGEPIING  139 (361)
T ss_pred             --------Cc-eEEEeccccC--ccccccchhhheeecchhHHHHHHHHHHh----C-CCEEEEecCceEEeCCeecccC
Confidence                    34 4555554321  12223356788999999988888776444    2 3599999997654322111111


Q ss_pred             cccccccccccCCCch--hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          220 ETITGKFFLRSKCYPC--ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~--~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                      +        +..++|.  ...|+.||+-.+.+++..+.      ..+....++.|-.|-.|-.+...+............
T Consensus       140 ~--------E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~------~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~  205 (361)
T KOG1430|consen  140 D--------ESLPYPLKHIDPYGESKALAEKLVLEANG------SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFL  205 (361)
T ss_pred             C--------CCCCCccccccccchHHHHHHHHHHHhcC------CCCeeEEEEccccccCCCCccccHHHHHHHHccCce
Confidence            1        1133333  35899999999888877663      356889999998887776555432221111000000


Q ss_pred             --------hhCCCCHHHHHHHHH---HHhc-CCCCCcccEEeCCCCcccc
Q 017580          298 --------LGLLQSPEKGINSVL---DAAL-APPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 --------~~~~~~~~e~A~~v~---~~~l-~~~~~sG~~~~~~~g~~~~  335 (369)
                              +..+...+.+|.+-+   ..+. .++..+|+.|+..+++++.
T Consensus       206 f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  206 FKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             EEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence                    001112232333222   1222 4557889999999999986

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.39  E-value=2.6e-11  Score=108.96  Aligned_cols=203  Identities=18%  Similarity=0.150  Sum_probs=136.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      +||||++|-+|.++.+.|. .+.+|+.++|..                       +|++|.+.+.+++.+.         
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~---------   49 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET---------   49 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh---------
Confidence            8999999999999999999 678999888752                       9999999999988864         


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  225 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  225 (369)
                        ++|++||+|++..  .+..+.+-+..+.+|..|+.++.++.-..      +.++|++|+-.-..+....         
T Consensus        50 --~PDvVIn~AAyt~--vD~aE~~~e~A~~vNa~~~~~lA~aa~~~------ga~lVhiSTDyVFDG~~~~---------  110 (281)
T COG1091          50 --RPDVVINAAAYTA--VDKAESEPELAFAVNATGAENLARAAAEV------GARLVHISTDYVFDGEKGG---------  110 (281)
T ss_pred             --CCCEEEECccccc--cccccCCHHHHHHhHHHHHHHHHHHHHHh------CCeEEEeecceEecCCCCC---------
Confidence              5999999999853  23334456789999999999999987443      5799999996654332211         


Q ss_pred             cccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH-------h
Q 017580          226 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-------L  298 (369)
Q Consensus       226 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-------~  298 (369)
                      .+.+.....+...||.||.+-+..++....          +...+...|+-..-..++......... ...+       .
T Consensus       111 ~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~----------~~~I~Rtswv~g~~g~nFv~tml~la~-~~~~l~vv~Dq~  179 (281)
T COG1091         111 PYKETDTPNPLNVYGRSKLAGEEAVRAAGP----------RHLILRTSWVYGEYGNNFVKTMLRLAK-EGKELKVVDDQY  179 (281)
T ss_pred             CCCCCCCCCChhhhhHHHHHHHHHHHHhCC----------CEEEEEeeeeecCCCCCHHHHHHHHhh-cCCceEEECCee
Confidence            111224556677999999999888766541          233445555554433332211100000 0000       1


Q ss_pred             hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          299 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                      +.....+++|+.+..++... ...|-|-..+.|.
T Consensus       180 gsPt~~~dlA~~i~~ll~~~-~~~~~yH~~~~g~  212 (281)
T COG1091         180 GSPTYTEDLADAILELLEKE-KEGGVYHLVNSGE  212 (281)
T ss_pred             eCCccHHHHHHHHHHHHhcc-ccCcEEEEeCCCc
Confidence            23568899999999655443 3334566655555

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.39  E-value=6e-12  Score=108.02  Aligned_cols=182  Identities=21%  Similarity=0.100  Sum_probs=122.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      |+|+||||.+|+.++++|+++|++|++++|++++.++          ..+++++++|+.|++++.+.++           
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-----------   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-----------   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-----------
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-----------
Confidence            6899999999999999999999999999999987655          4588999999999987766544           


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  225 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  225 (369)
                        +.|++|+++|....      +             ...++.++..+++.+ -.++|++||............       
T Consensus        60 --~~d~vi~~~~~~~~------~-------------~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~-------  110 (183)
T PF13460_consen   60 --GADAVIHAAGPPPK------D-------------VDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFS-------  110 (183)
T ss_dssp             --TSSEEEECCHSTTT------H-------------HHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEE-------
T ss_pred             --hcchhhhhhhhhcc------c-------------ccccccccccccccc-cccceeeeccccCCCCCcccc-------
Confidence              48999999976422      1             444555666666655 569999999775521111000       


Q ss_pred             cccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCCHH
Q 017580          226 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPE  305 (369)
Q Consensus       226 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (369)
                          ....+....|...|...+.+.    +      ..+++...++||++..+..........     .........+.+
T Consensus       111 ----~~~~~~~~~~~~~~~~~e~~~----~------~~~~~~~ivrp~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~  171 (183)
T PF13460_consen  111 ----DEDKPIFPEYARDKREAEEAL----R------ESGLNWTIVRPGWIYGNPSRSYRLIKE-----GGPQGVNFISRE  171 (183)
T ss_dssp             ----GGTCGGGHHHHHHHHHHHHHH----H------HSTSEEEEEEESEEEBTTSSSEEEESS-----TSTTSHCEEEHH
T ss_pred             ----cccccchhhhHHHHHHHHHHH----H------hcCCCEEEEECcEeEeCCCcceeEEec-----cCCCCcCcCCHH
Confidence                011122346677776554333    1      347899999999987665332111000     000011457899


Q ss_pred             HHHHHHHHHhc
Q 017580          306 KGINSVLDAAL  316 (369)
Q Consensus       306 e~A~~v~~~~l  316 (369)
                      |+|+.+++++.
T Consensus       172 DvA~~~~~~l~  182 (183)
T PF13460_consen  172 DVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhC
Confidence            99999997653

...

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.38  E-value=2.5e-11  Score=109.96  Aligned_cols=188  Identities=18%  Similarity=0.226  Sum_probs=148.3

Q ss_pred             CCEEEEeCC-CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGA-TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGa-s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .++|+|.|. +.-|++.+|..|-++|+-|++++.+.++.+.+.++-     ...+.....|..++.++...+.++.+.+.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-----~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-----RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-----CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            468999995 799999999999999999999999877654443332     34588999999999999888888888775


Q ss_pred             cc--------CCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEc-CCc
Q 017580          142 DS--------DMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVT-SFT  208 (369)
Q Consensus       142 ~~--------~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vs-S~~  208 (369)
                      ..        .+...+..+|......   +|...++.+.|.+.++.|++.++.+++.++|+++.+. ...+||.++ |+.
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence            31        1122566666555543   4556889999999999999999999999999998822 135666655 554


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                      +.                    ...|..+.-.....++.+|+..|++|++   +.+|.|..++.|.++-.
T Consensus       158 ss--------------------l~~PfhspE~~~~~al~~~~~~LrrEl~---~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  158 SS--------------------LNPPFHSPESIVSSALSSFFTSLRRELR---PHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hc--------------------cCCCccCHHHHHHHHHHHHHHHHHHHhh---hcCCceEEEEeeeeccc
Confidence            44                    5567777888899999999999999998   89999999999988744

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.38  E-value=9.1e-12  Score=111.96  Aligned_cols=168  Identities=15%  Similarity=0.163  Sum_probs=121.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc-CCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++||||||.|-||.+++.+|.++|+.|++++.=....-...+.+++.. ...++.+++.|++|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            5789999999999999999999999999999763332223333333322 2468999999999999998888853     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                            .+|.++|-|+...-.+  +.+...+..+.|+.|++.++..+..+    + -..+|+.||..-+..+ ..++   
T Consensus        77 ------~fd~V~Hfa~~~~vge--S~~~p~~Y~~nNi~gtlnlLe~~~~~----~-~~~~V~sssatvYG~p-~~ip---  139 (343)
T KOG1371|consen   77 ------KFDAVMHFAALAAVGE--SMENPLSYYHNNIAGTLNLLEVMKAH----N-VKALVFSSSATVYGLP-TKVP---  139 (343)
T ss_pred             ------CCceEEeehhhhccch--hhhCchhheehhhhhHHHHHHHHHHc----C-CceEEEecceeeecCc-ceee---
Confidence                  3999999999753222  23334678899999999998876444    2 3589999987765332 1111   


Q ss_pred             cccccccccCCCc-hhhhhhhhHHHHHHHHHHHHHHh
Q 017580          222 ITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNL  257 (369)
Q Consensus       222 ~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~el  257 (369)
                           +.++.+.. +.+.|+.+|.+++...+...+-+
T Consensus       140 -----~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~  171 (343)
T KOG1371|consen  140 -----ITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAY  171 (343)
T ss_pred             -----ccCcCCCCCCCCcchhhhHHHHHHHHhhhccc
Confidence                 11223333 67899999999999999888765

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.37  E-value=4.8e-11  Score=110.03  Aligned_cols=215  Identities=14%  Similarity=0.032  Sum_probs=117.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      |+||||+|.||.+++++|+++|++|++++|+.+......        .  ..  ..|+.. +.       ..+      .
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~--~~~~~~-~~-------~~~------~   54 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EG--YKPWAP-LA-------ESE------A   54 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--ee--eecccc-cc-------hhh------h
Confidence            689999999999999999999999999999876532211        0  01  112221 11       111      2


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCC-CeEEEEcCCccccccc-ccCCCcccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFTHRNVFN-AQVNNETIT  223 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~-g~IV~vsS~~~~~~~~-~~~~~~~~~  223 (369)
                      ...+|++||+||........+.+..+..+++|+.++..+++++...    +.. .++|+.||...+.... ..+..+   
T Consensus        55 ~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~~i~~S~~~~yg~~~~~~~~E~---  127 (292)
T TIGR01777        55 LEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA----EQKPKVFISASAVGYYGTSEDRVFTEE---  127 (292)
T ss_pred             cCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc----CCCceEEEEeeeEEEeCCCCCCCcCcc---
Confidence            3469999999997533223345566778899999998888876432    211 2344444432221111 111111   


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh-----
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-----  298 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-----  298 (369)
                             .+..+...|+..+...+...+    .+.   ..++.+..+.|+.+-.+-.................+.     
T Consensus       128 -------~~~~~~~~~~~~~~~~e~~~~----~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~  193 (292)
T TIGR01777       128 -------DSPAGDDFLAELCRDWEEAAQ----AAE---DLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQ  193 (292)
T ss_pred             -------cCCCCCChHHHHHHHHHHHhh----hch---hcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCc
Confidence                   111122234434433333322    222   3578999999999976632111111000000000011     


Q ss_pred             -hCCCCHHHHHHHHHHHhcCCCCCcccEEeC
Q 017580          299 -GLLQSPEKGINSVLDAALAPPETSGVYFFG  328 (369)
Q Consensus       299 -~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~  328 (369)
                       ..+...+|+|+.++.++..+. ..|.|...
T Consensus       194 ~~~~i~v~Dva~~i~~~l~~~~-~~g~~~~~  223 (292)
T TIGR01777       194 WFSWIHIEDLVQLILFALENAS-ISGPVNAT  223 (292)
T ss_pred             ccccEeHHHHHHHHHHHhcCcc-cCCceEec
Confidence             235789999999997765433 34655543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.36  E-value=6.3e-11  Score=109.09  Aligned_cols=189  Identities=20%  Similarity=0.162  Sum_probs=122.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcc---hHHHHHHHHH-----hhcCCCcEEEEEecCCChHH--HHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSH---LLSETMADIT-----SRNKDARLEAFQVDLSSFQS--VLKF  132 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~---~~~~~~~~~~-----~~~~~~~v~~~~~Dls~~~~--i~~~  132 (369)
                      +++++|||||.+|..+.++|+.+- ++|++..|-.+   ..+.+.+.+.     ++....+++++..|++.++-  =+.-
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999998876 59999988544   2333333333     12235789999999994320  0111


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      .+++         ...+|.++|||+..+-.     ..+.+....|+.|+..+++...     +++...+.+|||++....
T Consensus        81 ~~~L---------a~~vD~I~H~gA~Vn~v-----~pYs~L~~~NVlGT~evlrLa~-----~gk~Kp~~yVSsisv~~~  141 (382)
T COG3320          81 WQEL---------AENVDLIIHNAALVNHV-----FPYSELRGANVLGTAEVLRLAA-----TGKPKPLHYVSSISVGET  141 (382)
T ss_pred             HHHH---------hhhcceEEecchhhccc-----CcHHHhcCcchHhHHHHHHHHh-----cCCCceeEEEeeeeeccc
Confidence            1222         23599999999976432     2246778899999998888752     221335999999876533


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                      ....--........-...........|+.||.+.+.+++...       ..|+++.++.||+|-.+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~-------~rGLpv~I~Rpg~I~gd  200 (382)
T COG3320         142 EYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG-------DRGLPVTIFRPGYITGD  200 (382)
T ss_pred             cccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh-------hcCCCeEEEecCeeecc
Confidence            211111111110000111233445679999999999887766       45889999999999544

>PLN02778 3,5-epimerase/4-reductase

Probab=99.31  E-value=2.3e-10  Score=106.05  Aligned_cols=145  Identities=12%  Similarity=0.041  Sum_probs=91.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .+++|||||+|.||.+++++|+++|++|+...                          .|+++.+.+...++   .    
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~---~----   55 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADID---A----   55 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHH---h----
Confidence            46799999999999999999999999987432                          23344444433332   1    


Q ss_pred             cCCCCCccEEEeccccccCCC-CCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCc
Q 017580          143 SDMHSSIQLLINNAGILATSS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~  220 (369)
                          .++|++||+||...... +...+...+.+++|+.++..+++++...    +  .+.+++||...+.... .+....
T Consensus        56 ----~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g--v~~v~~sS~~vy~~~~~~p~~~~  125 (298)
T PLN02778         56 ----VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER----G--LVLTNYATGCIFEYDDAHPLGSG  125 (298)
T ss_pred             ----cCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----C--CCEEEEecceEeCCCCCCCcccC
Confidence                25899999999864321 2233455778999999999999987543    2  2445565543221100 000000


Q ss_pred             ccccccccc-cCCCchhhhhhhhHHHHHHHHHHHH
Q 017580          221 TITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELH  254 (369)
Q Consensus       221 ~~~~~~~~~-~~~~~~~~~Y~~SK~a~~~~~~~la  254 (369)
                          ..+.+ ..+.+..+.|+.||.+.+.+++..+
T Consensus       126 ----~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        126 ----IGFKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             ----CCCCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence                00010 1233344689999999999988765

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.29  E-value=1.5e-11  Score=113.24  Aligned_cols=202  Identities=17%  Similarity=0.132  Sum_probs=122.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      ++|||||+|-||.++++.|.++|++|+.++|+                       .+|++|.+++.+++++.        
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~--------   50 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF--------   50 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh--------
Confidence            58999999999999999999999999999876                       68999999988888764        


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                         ++|++||+||+..+  +..++..+..+.+|+.++..+++.+...      +.++|++||..-..+....        
T Consensus        51 ---~pd~Vin~aa~~~~--~~ce~~p~~a~~iN~~~~~~la~~~~~~------~~~li~~STd~VFdG~~~~--------  111 (286)
T PF04321_consen   51 ---KPDVVINCAAYTNV--DACEKNPEEAYAINVDATKNLAEACKER------GARLIHISTDYVFDGDKGG--------  111 (286)
T ss_dssp             -----SEEEE------H--HHHHHSHHHHHHHHTHHHHHHHHHHHHC------T-EEEEEEEGGGS-SSTSS--------
T ss_pred             ---CCCeEeccceeecH--HhhhhChhhhHHHhhHHHHHHHHHHHHc------CCcEEEeeccEEEcCCccc--------
Confidence               38999999997521  2223456778999999999999887433      4799999997654332111        


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-HH------
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-KL------  297 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~------  297 (369)
                       .+.+..+..+.+.||.+|+..+...+...        +  ....+.++++-.+-.+++...  ....... .+      
T Consensus       112 -~y~E~d~~~P~~~YG~~K~~~E~~v~~~~--------~--~~~IlR~~~~~g~~~~~~~~~--~~~~~~~~~~i~~~~d  178 (286)
T PF04321_consen  112 -PYTEDDPPNPLNVYGRSKLEGEQAVRAAC--------P--NALILRTSWVYGPSGRNFLRW--LLRRLRQGEPIKLFDD  178 (286)
T ss_dssp             -SB-TTS----SSHHHHHHHHHHHHHHHH---------S--SEEEEEE-SEESSSSSSHHHH--HHHHHHCTSEEEEESS
T ss_pred             -ccccCCCCCCCCHHHHHHHHHHHHHHHhc--------C--CEEEEecceecccCCCchhhh--HHHHHhcCCeeEeeCC
Confidence             11122445667899999999988776632        2  466678888876622221111  1110000 00      


Q ss_pred             -hhCCCCHHHHHHHHHHHhcCCC---CCcccEEeCC
Q 017580          298 -LGLLQSPEKGINSVLDAALAPP---ETSGVYFFGG  329 (369)
Q Consensus       298 -~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~  329 (369)
                       .+.....+|+|+.++.++-...   ...|-|-+.+
T Consensus       179 ~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~  214 (286)
T PF04321_consen  179 QYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSG  214 (286)
T ss_dssp             CEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---
T ss_pred             ceeCCEEHHHHHHHHHHHHHhcccccccceeEEEec
Confidence             0123568899999997654432   1235554433

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK05865 hypothetical protein; Provisional

Probab=99.26  E-value=9.1e-11  Score=120.98  Aligned_cols=181  Identities=15%  Similarity=0.066  Sum_probs=120.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||.+++++|+++|++|++++|+....      .     ..++.++.+|++|.+++.++++          
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~----------   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT----------   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh----------
Confidence            599999999999999999999999999999975321      1     1257889999999988766543          


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                         .+|++||+|+...+           .+++|+.++.++++++    ++.+ .++||++||..                
T Consensus        61 ---~vD~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa----~~~g-vkr~V~iSS~~----------------  105 (854)
T PRK05865         61 ---GADVVAHCAWVRGR-----------NDHINIDGTANVLKAM----AETG-TGRIVFTSSGH----------------  105 (854)
T ss_pred             ---CCCEEEECCCcccc-----------hHHHHHHHHHHHHHHH----HHcC-CCeEEEECCcH----------------
Confidence               38999999986421           4688999998877664    3333 46999999821                


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh-----
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-----  299 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-----  299 (369)
                                        |.+.+.+++          ..++.+..+.|+.+..+-...   ...........+.+     
T Consensus       106 ------------------K~aaE~ll~----------~~gl~~vILRp~~VYGP~~~~---~i~~ll~~~v~~~G~~~~~  154 (854)
T PRK05865        106 ------------------QPRVEQMLA----------DCGLEWVAVRCALIFGRNVDN---WVQRLFALPVLPAGYADRV  154 (854)
T ss_pred             ------------------HHHHHHHHH----------HcCCCEEEEEeceEeCCChHH---HHHHHhcCceeccCCCCce
Confidence                              766665442          236788999999887663211   11100000001111     


Q ss_pred             -CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017580          300 -LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  333 (369)
Q Consensus       300 -~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~  333 (369)
                       .+...+|+|++++.++.......|. |+..++..
T Consensus       155 ~dfIhVdDVA~Ai~~aL~~~~~~ggv-yNIgsg~~  188 (854)
T PRK05865        155 VQVVHSDDAQRLLVRALLDTVIDSGP-VNLAAPGE  188 (854)
T ss_pred             EeeeeHHHHHHHHHHHHhCCCcCCCe-EEEECCCc
Confidence             2567899999998655433333344 44444443

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.24  E-value=4.7e-10  Score=98.87  Aligned_cols=252  Identities=13%  Similarity=0.073  Sum_probs=161.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeC---CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREG--FHVVLVGR---SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r---~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+.++||||.|.||...+..++..-  ++.+.++.   ...     .+.+++.....+..+++.|+.+...+...+.   
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-----~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~---   77 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-----LKNLEPVRNSPNYKFVEGDIADADLVLYLFE---   77 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-----cchhhhhccCCCceEeeccccchHHHHhhhc---
Confidence            3789999999999999999999873  45554432   111     1222222225678999999999887766554   


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                              ..++|.++|-|...+.  +.+.-+--+....|++++..|++...-...    -.++|+||+-.-+.......
T Consensus        78 --------~~~id~vihfaa~t~v--d~s~~~~~~~~~nnil~t~~Lle~~~~sg~----i~~fvhvSTdeVYGds~~~~  143 (331)
T KOG0747|consen   78 --------TEEIDTVIHFAAQTHV--DRSFGDSFEFTKNNILSTHVLLEAVRVSGN----IRRFVHVSTDEVYGDSDEDA  143 (331)
T ss_pred             --------cCchhhhhhhHhhhhh--hhhcCchHHHhcCCchhhhhHHHHHHhccC----eeEEEEecccceecCccccc
Confidence                    2579999999986532  111111224567899999999988765531    35899999976653321111


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc---hhHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV---PSFLSLMAFTV  294 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~  294 (369)
                      ...        +.....+-..|++||+|.+++.+++.+.+      ++.+..+.-+.|-.|-.-..   |.+........
T Consensus       144 ~~~--------E~s~~nPtnpyAasKaAaE~~v~Sy~~sy------~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~  209 (331)
T KOG0747|consen  144 VVG--------EASLLNPTNPYAASKAAAEMLVRSYGRSY------GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGK  209 (331)
T ss_pred             ccc--------ccccCCCCCchHHHHHHHHHHHHHHhhcc------CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCC
Confidence            110        12445566789999999999999999866      57788888888877754332   21111111100


Q ss_pred             HHH-------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhccCC
Q 017580          295 LKL-------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQL  362 (369)
Q Consensus       295 ~~~-------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~~~  362 (369)
                      ..+       .+...-.+|+++++--  ...+...|+.|..+.          +|+.....|-+.++++++..-+
T Consensus       210 ~~~i~g~g~~~rs~l~veD~~ea~~~--v~~Kg~~geIYNIgt----------d~e~~~~~l~k~i~eli~~~~~  272 (331)
T KOG0747|consen  210 EYPIHGDGLQTRSYLYVEDVSEAFKA--VLEKGELGEIYNIGT----------DDEMRVIDLAKDICELFEKRLP  272 (331)
T ss_pred             CcceecCcccceeeEeHHHHHHHHHH--HHhcCCccceeeccC----------cchhhHHHHHHHHHHHHHHhcc
Confidence            001       1123569999999883  333355688987553          3455566777888888766433

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.23  E-value=3.4e-10  Score=113.09  Aligned_cols=245  Identities=13%  Similarity=0.153  Sum_probs=144.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC---EEEEEeCCcch---HHHHHHHH---------HhhcC-------CCcEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF---HVVLVGRSSHL---LSETMADI---------TSRNK-------DARLEA  118 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~---~Vvl~~r~~~~---~~~~~~~~---------~~~~~-------~~~v~~  118 (369)
                      +++|+|+||||||.||+.++++|++.+.   +|++..|....   .+.+.+++         ++..+       ..++++
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4789999999999999999999998753   78999886432   22222222         22222       247999


Q ss_pred             EEecCCChH-HH-HHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC
Q 017580          119 FQVDLSSFQ-SV-LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP  196 (369)
Q Consensus       119 ~~~Dls~~~-~i-~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~  196 (369)
                      +..|+++++ .+ .+..+.+.         ..+|++||+|+....     .+..+..+++|+.|+..+++.+...    +
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~---------~~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~----~  258 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA---------KEVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKC----K  258 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH---------hcCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHc----C
Confidence            999999873 00 01112222         239999999997642     1346778999999999998876543    1


Q ss_pred             CCCeEEEEcCCcccccccccCCCcccc-----------------------c-----------c------c---------c
Q 017580          197 VPSRIVNVTSFTHRNVFNAQVNNETIT-----------------------G-----------K------F---------F  227 (369)
Q Consensus       197 ~~g~IV~vsS~~~~~~~~~~~~~~~~~-----------------------~-----------~------~---------~  227 (369)
                      ...++|++||...+......+.+....                       -           .      .         .
T Consensus       259 ~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~  338 (605)
T PLN02503        259 KLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGL  338 (605)
T ss_pred             CCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhccc
Confidence            125899999966543321111110000                       0           0      0         0


Q ss_pred             cccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH--HHH--HHHHhh----
Q 017580          228 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM--AFT--VLKLLG----  299 (369)
Q Consensus       228 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~--~~~--~~~~~~----  299 (369)
                      .+..-.+.-..|.-||+..+.+++..+        .++.+.++.|+.|.+.....++.+....  ...  .....+    
T Consensus       339 ~~~~~~~~pNtYt~TK~lAE~lV~~~~--------~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~  410 (605)
T PLN02503        339 ERAKLYGWQDTYVFTKAMGEMVINSMR--------GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTG  410 (605)
T ss_pred             chhhhCCCCChHHHHHHHHHHHHHHhc--------CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeE
Confidence            000111222579999999888876332        3678999999999776655555433321  000  000011    


Q ss_pred             ---------CCCCHHHHHHHHHHHhcC-C-C-CCcccEEeCCCC
Q 017580          300 ---------LLQSPEKGINSVLDAALA-P-P-ETSGVYFFGGKG  331 (369)
Q Consensus       300 ---------~~~~~~e~A~~v~~~~l~-~-~-~~sG~~~~~~~g  331 (369)
                               -...+|.++++++-+... . . ...+..|....+
T Consensus       411 ~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        411 FLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             EEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence                     125678888888844111 1 1 224677766554

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.22  E-value=4.3e-09  Score=85.18  Aligned_cols=214  Identities=14%  Similarity=0.041  Sum_probs=148.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ..|+|-|+-+.+|.+++..|-.+++-|.-++..+..  +          ...-+.+..|-+-.++-+.+.+++-+.+   
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe--~----------Ad~sI~V~~~~swtEQe~~v~~~vg~sL---   68 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE--Q----------ADSSILVDGNKSWTEQEQSVLEQVGSSL---   68 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc--c----------ccceEEecCCcchhHHHHHHHHHHHHhh---
Confidence            569999999999999999999999988777765431  0          1122445555555566666777776666   


Q ss_pred             CCCCCccEEEeccccccCCCCCCH---HhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTP---EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~---~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                       ...++|.++|-||-......-+.   .+.+-++.-.++....-.+....+++.   +|-.-..+.-++.          
T Consensus        69 -~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl----------  134 (236)
T KOG4022|consen   69 -QGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAAL----------  134 (236)
T ss_pred             -cccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---Cceeeeccccccc----------
Confidence             34789999999997643222222   333456666666666666666666654   3566666665566          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhC
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  300 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  300 (369)
                                .+.|++..|+++|+|+.+++++|+.+-.- .+.|--+.+|-|-..+|||.|++.+...+.         .
T Consensus       135 ----------~gTPgMIGYGMAKaAVHqLt~SLaak~SG-lP~gsaa~~ilPVTLDTPMNRKwMP~ADfs---------s  194 (236)
T KOG4022|consen  135 ----------GGTPGMIGYGMAKAAVHQLTSSLAAKDSG-LPDGSAALTILPVTLDTPMNRKWMPNADFS---------S  194 (236)
T ss_pred             ----------CCCCcccchhHHHHHHHHHHHHhcccccC-CCCCceeEEEeeeeccCccccccCCCCccc---------C
Confidence                      78899999999999999999999966331 267788899999999999999875433221         2


Q ss_pred             CCCHHHHHHHHHHHhcCCC-CCcccEE
Q 017580          301 LQSPEKGINSVLDAALAPP-ETSGVYF  326 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~~-~~sG~~~  326 (369)
                      +...+.+++..+.-..... ..+|..+
T Consensus       195 WTPL~fi~e~flkWtt~~~RPssGsLl  221 (236)
T KOG4022|consen  195 WTPLSFISEHFLKWTTETSRPSSGSLL  221 (236)
T ss_pred             cccHHHHHHHHHHHhccCCCCCCCceE
Confidence            3456778887776544433 4456554

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.21  E-value=4.1e-09  Score=117.29  Aligned_cols=243  Identities=19%  Similarity=0.103  Sum_probs=140.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC----CEEEEEeCCcchHHH---HHHHHHhhc-----CCCcEEEEEecCCChHHH-
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREG----FHVVLVGRSSHLLSE---TMADITSRN-----KDARLEAFQVDLSSFQSV-  129 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G----~~Vvl~~r~~~~~~~---~~~~~~~~~-----~~~~v~~~~~Dls~~~~i-  129 (369)
                      .++|+||||+|.||.+++++|+++|    .+|++..|+....+.   ..+.....+     ...++.++..|++++.-- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999987    789999998654322   212111110     023789999999865210 


Q ss_pred             -HHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          130 -LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       130 -~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                       ....+++.         ..+|++||||+.....     ..++.....|+.|+..+++.+..    .+ ..+++++||.+
T Consensus      1051 ~~~~~~~l~---------~~~d~iiH~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~----~~-~~~~v~vSS~~ 1111 (1389)
T TIGR03443      1051 SDEKWSDLT---------NEVDVIIHNGALVHWV-----YPYSKLRDANVIGTINVLNLCAE----GK-AKQFSFVSSTS 1111 (1389)
T ss_pred             CHHHHHHHH---------hcCCEEEECCcEecCc-----cCHHHHHHhHHHHHHHHHHHHHh----CC-CceEEEEeCee
Confidence             11122222         3589999999976421     12334456799999999887643    22 35899999986


Q ss_pred             ccccccc-cCCC-------cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017580          209 HRNVFNA-QVNN-------ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  280 (369)
Q Consensus       209 ~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~  280 (369)
                      .+..... ....       ..+................|+.||.+.+.+++..+       ..++.+.++.||.|..+-.
T Consensus      1112 v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~-------~~g~~~~i~Rpg~v~G~~~ 1184 (1389)
T TIGR03443      1112 ALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG-------KRGLRGCIVRPGYVTGDSK 1184 (1389)
T ss_pred             ecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH-------hCCCCEEEECCCccccCCC
Confidence            6532100 0000       00000000000112223569999999998887653       3478999999999975532


Q ss_pred             ccc---hhHHHHHHHHH--H--HHh----hCCCCHHHHHHHHHHHhcCCCC-CcccEEeCCCC
Q 017580          281 REV---PSFLSLMAFTV--L--KLL----GLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKG  331 (369)
Q Consensus       281 ~~~---~~~~~~~~~~~--~--~~~----~~~~~~~e~A~~v~~~~l~~~~-~sG~~~~~~~g  331 (369)
                      ...   ...........  .  .|.    .-+...+++|++++.++..... ..+..|...++
T Consensus      1185 ~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~ 1247 (1389)
T TIGR03443      1185 TGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH 1247 (1389)
T ss_pred             cCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC
Confidence            221   11111110000  0  010    1245789999999977654432 23345544433

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.20  E-value=3.3e-10  Score=104.33  Aligned_cols=189  Identities=12%  Similarity=-0.015  Sum_probs=113.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||||.||++++++|+++|++|.+++|++++..           ...+..+.+|+.|++++.++++...       
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~~-------   62 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSDD-------   62 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhccc-------
Confidence            3899999999999999999999999999999987431           1245567899999999988776432       


Q ss_pred             CCCC-ccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          145 MHSS-IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       145 ~~~~-id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                      ...+ +|.++++++...       +..+            ..+.+++.+++.+ -.+||++||....             
T Consensus        63 ~~~g~~d~v~~~~~~~~-------~~~~------------~~~~~i~aa~~~g-v~~~V~~Ss~~~~-------------  109 (285)
T TIGR03649        63 GMEPEISAVYLVAPPIP-------DLAP------------PMIKFIDFARSKG-VRRFVLLSASIIE-------------  109 (285)
T ss_pred             CcCCceeEEEEeCCCCC-------ChhH------------HHHHHHHHHHHcC-CCEEEEeeccccC-------------
Confidence            2344 899998876421       1101            1123444455554 4699999985433             


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHHHHHHHHHH--HHhh
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLMAFTVL--KLLG  299 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~--~~~~  299 (369)
                             .+.+       ++...+.+.    ++     ..++..+.+.|+++..++....  ............  ....
T Consensus       110 -------~~~~-------~~~~~~~~l----~~-----~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~  166 (285)
T TIGR03649       110 -------KGGP-------AMGQVHAHL----DS-----LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKI  166 (285)
T ss_pred             -------CCCc-------hHHHHHHHH----Hh-----ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCcc
Confidence                   1111       122122111    11     2378899999998765542211  000000000000  0001


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          300 LLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      .+.+++|+|+.+..++..+....+.|..
T Consensus       167 ~~v~~~Dva~~~~~~l~~~~~~~~~~~l  194 (285)
T TIGR03649       167 PFVSADDIARVAYRALTDKVAPNTDYVV  194 (285)
T ss_pred             CcccHHHHHHHHHHHhcCCCcCCCeEEe
Confidence            3679999999999776654444444544

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.18  E-value=1e-10  Score=102.99  Aligned_cols=185  Identities=17%  Similarity=0.161  Sum_probs=134.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhh--cCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +|++||||-+|-=|..+|+.|+++|+.|..+.|..+......-.+...  ..+.+++.+.+|++|..++.+++++++   
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~---   78 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ---   78 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC---
Confidence            689999999999999999999999999999988744322211022111  124569999999999999998888754   


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc-ccccCCC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV-FNAQVNN  219 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~-~~~~~~~  219 (369)
                              +|-+.|-|+..  +...+.+..+.+.+++.+|+..++.++.-.-  . ..-|+..-||..-+.. ...+...
T Consensus        79 --------PdEIYNLaAQS--~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~-~~~rfYQAStSE~fG~v~~~pq~E  145 (345)
T COG1089          79 --------PDEIYNLAAQS--HVGVSFEQPEYTADVDAIGTLRLLEAIRILG--E-KKTRFYQASTSELYGLVQEIPQKE  145 (345)
T ss_pred             --------chhheeccccc--cccccccCcceeeeechhHHHHHHHHHHHhC--C-cccEEEecccHHhhcCcccCcccc
Confidence                    78888888753  3345667778899999999999988764432  1 1357777777543311 1112222


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  273 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG  273 (369)
                                ..|+.+.++|+++|......+...+..+..-...||-+|.=+|.
T Consensus       146 ----------~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         146 ----------TTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             ----------CCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence                      27888999999999999888888877665434578888877775

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.11  E-value=5.2e-09  Score=107.85  Aligned_cols=156  Identities=13%  Similarity=0.058  Sum_probs=101.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      .++|||||+|.||+++++.|.++|++|...                          ..|++|.+.+.+.+++        
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~--------  426 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRN--------  426 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHh--------
Confidence            479999999999999999999999887311                          1357777777665543        


Q ss_pred             CCCCCccEEEeccccccCC-CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          144 DMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                         .++|++||+|+..... .+...+..+..+++|+.++..+++++...      +.+.|++||...+.........   
T Consensus       427 ---~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~------g~~~v~~Ss~~v~~~~~~~~~~---  494 (668)
T PLN02260        427 ---VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN------GLLMMNFATGCIFEYDAKHPEG---  494 (668)
T ss_pred             ---hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc------CCeEEEEcccceecCCcccccc---
Confidence               2489999999986432 23334566788999999999999987543      2456777664432110000000   


Q ss_pred             ccccccc-cCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEec
Q 017580          223 TGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  271 (369)
Q Consensus       223 ~~~~~~~-~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~  271 (369)
                      .+..+.+ ..+.+..+.|+.||.+.+.+++....      ...+++..+.
T Consensus       495 ~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~------~~~~r~~~~~  538 (668)
T PLN02260        495 SGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN------VCTLRVRMPI  538 (668)
T ss_pred             cCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh------heEEEEEEec
Confidence            0000011 12333447899999999999877642      2456666555

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.10  E-value=2.2e-10  Score=101.49  Aligned_cols=100  Identities=14%  Similarity=0.203  Sum_probs=74.7

Q ss_pred             CEEEEeCC-CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGA-TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGa-s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .+=.||.. |||||+++|++|+++|++|+++++...        +..   ..   ...+|+++.+++.++++.+.+    
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~---~~---~~~~Dv~d~~s~~~l~~~v~~----   76 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP---EP---HPNLSIREIETTKDLLITLKE----   76 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc---cc---CCcceeecHHHHHHHHHHHHH----
Confidence            45566766 578999999999999999999886311        110   00   245899999999999999888    


Q ss_pred             cCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHH
Q 017580          143 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTK  186 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~  186 (369)
                        .++++|++|||||+.  .+..+.+.+.|++++.   .+.+++.+
T Consensus        77 --~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        77 --LVQEHDILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             --HcCCCCEEEECCEeccccchhhCCHHHHhhhcc---hhhhhccc
Confidence              567899999999976  3455678888887644   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN00016 RNA-binding protein; Provisional

Probab=99.08  E-value=1.6e-08  Score=97.07  Aligned_cols=210  Identities=12%  Similarity=0.063  Sum_probs=120.2

Q ss_pred             CCCCEEEEe----CCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH-------HHHHhhcCCCcEEEEEecCCChHHH
Q 017580           61 IKRPVCIVT----GATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM-------ADITSRNKDARLEAFQVDLSSFQSV  129 (369)
Q Consensus        61 ~~~k~vlIT----Gas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~-------~~~~~~~~~~~v~~~~~Dls~~~~i  129 (369)
                      ...++|+||    ||+|.||.+++++|+++|++|++++|+........       .++.    ...++++..|+.|   +
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d---~  122 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD---V  122 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH---H
Confidence            345789999    99999999999999999999999999876432211       1111    1247888999876   2


Q ss_pred             HHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          130 LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       130 ~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      .+++.           ...+|++||++|..                  ..++    +.++..+++.+ -.++|++||...
T Consensus       123 ~~~~~-----------~~~~d~Vi~~~~~~------------------~~~~----~~ll~aa~~~g-vkr~V~~SS~~v  168 (378)
T PLN00016        123 KSKVA-----------GAGFDVVYDNNGKD------------------LDEV----EPVADWAKSPG-LKQFLFCSSAGV  168 (378)
T ss_pred             Hhhhc-----------cCCccEEEeCCCCC------------------HHHH----HHHHHHHHHcC-CCEEEEEccHhh
Confidence            22221           13589999987631                  1122    23344444443 469999999765


Q ss_pred             cccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hH-H
Q 017580          210 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SF-L  287 (369)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~-~  287 (369)
                      +.........+         ..+..+   +. +|...+.+.+          ..++.++.+.|+.+..+...... .. .
T Consensus       169 yg~~~~~p~~E---------~~~~~p---~~-sK~~~E~~l~----------~~~l~~~ilRp~~vyG~~~~~~~~~~~~  225 (378)
T PLN00016        169 YKKSDEPPHVE---------GDAVKP---KA-GHLEVEAYLQ----------KLGVNWTSFRPQYIYGPGNNKDCEEWFF  225 (378)
T ss_pred             cCCCCCCCCCC---------CCcCCC---cc-hHHHHHHHHH----------HcCCCeEEEeceeEECCCCCCchHHHHH
Confidence            42211100000         011111   11 7887776542          23678999999999876533211 11 0


Q ss_pred             HHHHHH-HH-HH-----hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          288 SLMAFT-VL-KL-----LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       288 ~~~~~~-~~-~~-----~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      ...... .. .+     ...+...+|+|+.++.++..+ ...|..|...+++.+.
T Consensus       226 ~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~~~~~~yni~~~~~~s  279 (378)
T PLN00016        226 DRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNP-KAAGQIFNIVSDRAVT  279 (378)
T ss_pred             HHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCc-cccCCEEEecCCCccC
Confidence            000000 00 00     012457999999999655443 3345666655555543

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.99  E-value=4.2e-09  Score=89.64  Aligned_cols=84  Identities=18%  Similarity=0.240  Sum_probs=70.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+ |+|.+++++|+++|++|++++|+.++.+.+...+..   ..++.++.+|++|++++.++++.+.+      
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~------   71 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIE------   71 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHH------
Confidence            58999998 788889999999999999999998776666554432   34788999999999999999999877      


Q ss_pred             CCCCccEEEecccc
Q 017580          145 MHSSIQLLINNAGI  158 (369)
Q Consensus       145 ~~~~id~lv~nAG~  158 (369)
                      ..+++|++|+.+-.
T Consensus        72 ~~g~id~lv~~vh~   85 (177)
T PRK08309         72 KNGPFDLAVAWIHS   85 (177)
T ss_pred             HcCCCeEEEEeccc
Confidence            56889999977654

>PRK12320 hypothetical protein; Provisional

Probab=98.97  E-value=6.7e-08  Score=98.05  Aligned_cols=186  Identities=14%  Similarity=0.084  Sum_probs=114.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|.||.+++++|.++|++|++++|+....           ....+.++.+|+++.. +.+    +.       
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-----------~~~~ve~v~~Dl~d~~-l~~----al-------   58 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-----------LDPRVDYVCASLRNPV-LQE----LA-------   58 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-----------ccCCceEEEccCCCHH-HHH----Hh-------
Confidence            599999999999999999999999999999875321           1235788999999873 222    11       


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                        ..+|++||.|+....          ....+|+.++.++++++.    +.+  .++|++||..+.              
T Consensus        59 --~~~D~VIHLAa~~~~----------~~~~vNv~Gt~nLleAA~----~~G--vRiV~~SS~~G~--------------  106 (699)
T PRK12320         59 --GEADAVIHLAPVDTS----------APGGVGITGLAHVANAAA----RAG--ARLLFVSQAAGR--------------  106 (699)
T ss_pred             --cCCCEEEEcCccCcc----------chhhHHHHHHHHHHHHHH----HcC--CeEEEEECCCCC--------------
Confidence              248999999986321          112579999998888763    333  489999986432              


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH-hhC---
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-LGL---  300 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~---  300 (369)
                            ..     .|.    .    ++.+..      ..++.+..+.|+.+..+-.....  ........... .+.   
T Consensus       107 ------~~-----~~~----~----aE~ll~------~~~~p~~ILR~~nVYGp~~~~~~--~r~I~~~l~~~~~~~pI~  159 (699)
T PRK12320        107 ------PE-----LYR----Q----AETLVS------TGWAPSLVIRIAPPVGRQLDWMV--CRTVATLLRSKVSARPIR  159 (699)
T ss_pred             ------Cc-----ccc----H----HHHHHH------hcCCCEEEEeCceecCCCCcccH--hHHHHHHHHHHHcCCceE
Confidence                  00     122    1    222222      22466788888888776322110  01111111111 112   


Q ss_pred             CCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          301 LQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      +...+|++++++.++..  ..+| .|+.++++...
T Consensus       160 vIyVdDvv~alv~al~~--~~~G-iyNIG~~~~~S  191 (699)
T PRK12320        160 VLHLDDLVRFLVLALNT--DRNG-VVDLATPDTTN  191 (699)
T ss_pred             EEEHHHHHHHHHHHHhC--CCCC-EEEEeCCCeeE
Confidence            23789999999865532  2245 66666666554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.97  E-value=6e-09  Score=92.04  Aligned_cols=209  Identities=18%  Similarity=0.153  Sum_probs=114.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      ++||||||-||++++.+|.+.|++|++++|++++.+...        ...+.       ..+    ..++..        
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~v~-------~~~----~~~~~~--------   53 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPNVT-------LWE----GLADAL--------   53 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Ccccc-------ccc----hhhhcc--------
Confidence            589999999999999999999999999999987543321        11111       001    111111        


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  225 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  225 (369)
                      ..++|++||-||..-.....+++.=+..++    |-+..++.+.....+...+.++..-+|..|+..........     
T Consensus        54 ~~~~DavINLAG~~I~~rrWt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~t-----  124 (297)
T COG1090          54 TLGIDAVINLAGEPIAERRWTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVT-----  124 (297)
T ss_pred             cCCCCEEEECCCCccccccCCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeee-----
Confidence            137999999999753223345555455555    44455555555555433245565556666664432211111     


Q ss_pred             cccccCCCchhhhhhhhHHHHHHHHHH---HHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh---
Q 017580          226 FFLRSKCYPCARIYEYSKLCLLIFSYE---LHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG---  299 (369)
Q Consensus       226 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~---la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---  299 (369)
                         +..+ ++.       -.+..+|+.   .+....   ..|+||..+.-|.|-.+-..-++.....+......+++   
T Consensus       125 ---E~~~-~g~-------~Fla~lc~~WE~~a~~a~---~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGr  190 (297)
T COG1090         125 ---EESP-PGD-------DFLAQLCQDWEEEALQAQ---QLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGR  190 (297)
T ss_pred             ---cCCC-CCC-------ChHHHHHHHHHHHHhhhh---hcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCC
Confidence               0011 111       112222222   222222   56999999999999764332222211111111111221   


Q ss_pred             ---CCCCHHHHHHHHHHHhcCCCCCcccE
Q 017580          300 ---LLQSPEKGINSVLDAALAPPETSGVY  325 (369)
Q Consensus       300 ---~~~~~~e~A~~v~~~~l~~~~~sG~~  325 (369)
                         .+...||..+.+++++-.+ ..+|.|
T Consensus       191 Q~~SWIhieD~v~~I~fll~~~-~lsGp~  218 (297)
T COG1090         191 QWFSWIHIEDLVNAILFLLENE-QLSGPF  218 (297)
T ss_pred             ceeeeeeHHHHHHHHHHHHhCc-CCCCcc
Confidence               2578999999999765443 345655

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.81  E-value=4.4e-07  Score=87.97  Aligned_cols=232  Identities=17%  Similarity=0.072  Sum_probs=145.3

Q ss_pred             CCCCCCCCEEEEeCCC-CchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHH
Q 017580           57 PITGIKRPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        57 ~~~~~~~k~vlITGas-~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~  132 (369)
                      ......+++++||||+ +.||.+++.+|+..|++||++..+- ++-.+..+.+-.++  ++..+.++..++.+..+|+.+
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            3445678999999999 7899999999999999999986654 33445555554443  466788999999999999999


Q ss_pred             HHHHHHHHhcc--------CCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCe
Q 017580          133 KDSLQQWLLDS--------DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSR  200 (369)
Q Consensus       133 ~~~i~~~~~~~--------~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~  200 (369)
                      ++.|-..-.+.        .....++.++--|.+.  +...+..+. -|-.+++-+.+...++-.+.+.-..++  ..-+
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence            98776532110        0112356666555543  222222221 244566666666666666555433322  1235


Q ss_pred             EEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc-CCc
Q 017580          201 IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK-TNI  279 (369)
Q Consensus       201 IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~-T~~  279 (369)
                      ||.=.|...                     ..+.+..+|+-||++++..+.-...|-..  ...+.+....-||++ |.+
T Consensus       549 VVLPgSPNr---------------------G~FGgDGaYgEsK~aldav~~RW~sEs~W--a~~vsl~~A~IGWtrGTGL  605 (866)
T COG4982         549 VVLPGSPNR---------------------GMFGGDGAYGESKLALDAVVNRWHSESSW--AARVSLAHALIGWTRGTGL  605 (866)
T ss_pred             EEecCCCCC---------------------CccCCCcchhhHHHHHHHHHHHhhccchh--hHHHHHhhhheeeeccccc
Confidence            666566442                     23456678999999999887766655321  234555556679997 776


Q ss_pred             cccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhc
Q 017580          280 MREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL  316 (369)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l  316 (369)
                      +....-.........    =+.-+++|.|..++.++.
T Consensus       606 Mg~Ndiiv~aiEk~G----V~tyS~~EmA~~LLgL~s  638 (866)
T COG4982         606 MGHNDIIVAAIEKAG----VRTYSTDEMAFNLLGLAS  638 (866)
T ss_pred             cCCcchhHHHHHHhC----ceecCHHHHHHHHHhhcc
Confidence            655432221111110    144589999999986543

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.79  E-value=1.2e-07  Score=83.80  Aligned_cols=179  Identities=13%  Similarity=0.096  Sum_probs=118.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ..+.+++||||.|.||.+++++|..+|..|++++---..-.+....+   ....++..+..|+..+     ++.+     
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p-----l~~e-----   91 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP-----LLKE-----   91 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH-----HHHH-----
Confidence            45689999999999999999999999999999876433322222222   1244677777777654     2322     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                              +|.++|-|...+|..-.  ...-+++.+|+.++.+++..+.+.      ..|++..|+..-+.-   +..-+
T Consensus        92 --------vD~IyhLAapasp~~y~--~npvktIktN~igtln~lglakrv------~aR~l~aSTseVYgd---p~~hp  152 (350)
T KOG1429|consen   92 --------VDQIYHLAAPASPPHYK--YNPVKTIKTNVIGTLNMLGLAKRV------GARFLLASTSEVYGD---PLVHP  152 (350)
T ss_pred             --------hhhhhhhccCCCCcccc--cCccceeeecchhhHHHHHHHHHh------CceEEEeecccccCC---cccCC
Confidence                    67788888876543211  122467889999999998876444      368888888665532   11111


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                      ..+. .+..-.+....+.|...|.+.+.++.+..++      .||.|....+--+..|
T Consensus       153 q~e~-ywg~vnpigpr~cydegKr~aE~L~~~y~k~------~giE~rIaRifNtyGP  203 (350)
T KOG1429|consen  153 QVET-YWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ------EGIEVRIARIFNTYGP  203 (350)
T ss_pred             Cccc-cccccCcCCchhhhhHHHHHHHHHHHHhhcc------cCcEEEEEeeecccCC
Confidence            1111 1222356667889999999999998888765      4677766666544444

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.77  E-value=3.1e-07  Score=90.26  Aligned_cols=123  Identities=17%  Similarity=0.159  Sum_probs=84.5

Q ss_pred             EeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCCCC
Q 017580           68 VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHS  147 (369)
Q Consensus        68 ITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~~~  147 (369)
                      |+||++|+|.++++.|...|++|+.+.+.+.+.        ......++..+.+|.+..+.                   
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~--------~~~~~~~~~~~~~d~~~~~~-------------------   95 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW--------AAGWGDRFGALVFDATGITD-------------------   95 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc--------ccCcCCcccEEEEECCCCCC-------------------
Confidence            788889999999999999999999887654311        00001122222333332221                   


Q ss_pred             CccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccc
Q 017580          148 SIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF  227 (369)
Q Consensus       148 ~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  227 (369)
                                         .++        +.+.+.+++..++.|..   .||||+++|..+.                 
T Consensus        96 -------------------~~~--------l~~~~~~~~~~l~~l~~---~griv~i~s~~~~-----------------  128 (450)
T PRK08261         96 -------------------PAD--------LKALYEFFHPVLRSLAP---CGRVVVLGRPPEA-----------------  128 (450)
T ss_pred             -------------------HHH--------HHHHHHHHHHHHHhccC---CCEEEEEcccccc-----------------
Confidence                               122        12334566777777753   4799999997654                 


Q ss_pred             cccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCc
Q 017580          228 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  274 (369)
Q Consensus       228 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~  274 (369)
                            .....|+.+|+++.++++++++|+    ..+++++.+.|+.
T Consensus       129 ------~~~~~~~~akaal~gl~rsla~E~----~~gi~v~~i~~~~  165 (450)
T PRK08261        129 ------AADPAAAAAQRALEGFTRSLGKEL----RRGATAQLVYVAP  165 (450)
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHh----hcCCEEEEEecCC
Confidence                  123469999999999999999999    4689999999885

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.75  E-value=3.7e-08  Score=94.21  Aligned_cols=79  Identities=25%  Similarity=0.314  Sum_probs=61.6

Q ss_pred             CCCCCEEEEeCC---------------CCc-hHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecC
Q 017580           60 GIKRPVCIVTGA---------------TSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL  123 (369)
Q Consensus        60 ~~~~k~vlITGa---------------s~g-IG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl  123 (369)
                      +++||+++||||               |+| +|.++|++|+++|++|++++++.+ ..         . ..  ....+|+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~-~~--~~~~~dv  251 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------T-PA--GVKRIDV  251 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------C-CC--CcEEEcc
Confidence            478999999999               555 999999999999999999998753 11         0 11  1346899


Q ss_pred             CChHHHHHHHHHHHHHHhccCCCCCccEEEecccccc
Q 017580          124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA  160 (369)
Q Consensus       124 s~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~  160 (369)
                      ++.+++.+.+.   +      .++++|++|||||+..
T Consensus       252 ~~~~~~~~~v~---~------~~~~~DilI~~Aav~d  279 (399)
T PRK05579        252 ESAQEMLDAVL---A------ALPQADIFIMAAAVAD  279 (399)
T ss_pred             CCHHHHHHHHH---H------hcCCCCEEEEcccccc
Confidence            99888776665   3      4578999999999863

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.65  E-value=1.5e-07  Score=84.05  Aligned_cols=218  Identities=16%  Similarity=0.139  Sum_probs=121.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      |+||||+|.+|+.+++.|++.|++|.+..|+...  ...++++..    .++++..|+.|.+++.++++           
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-----------   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL----GAEVVEADYDDPESLVAALK-----------   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT----TTEEEES-TT-HHHHHHHHT-----------
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc----cceEeecccCCHHHHHHHHc-----------
Confidence            6899999999999999999999999999999832  223334332    34677999999988776554           


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  225 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  225 (369)
                        ++|.++++.+...      +..        .-....+++++...    + =.++| .||......         .   
T Consensus        64 --g~d~v~~~~~~~~------~~~--------~~~~~~li~Aa~~a----g-Vk~~v-~ss~~~~~~---------~---  109 (233)
T PF05368_consen   64 --GVDAVFSVTPPSH------PSE--------LEQQKNLIDAAKAA----G-VKHFV-PSSFGADYD---------E---  109 (233)
T ss_dssp             --TCSEEEEESSCSC------CCH--------HHHHHHHHHHHHHH----T--SEEE-ESEESSGTT---------T---
T ss_pred             --CCceEEeecCcch------hhh--------hhhhhhHHHhhhcc----c-cceEE-EEEeccccc---------c---
Confidence              4899998887542      111        11222334444332    2 24776 455443310         0   


Q ss_pred             cccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH----HHHHHHh---
Q 017580          226 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA----FTVLKLL---  298 (369)
Q Consensus       226 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~----~~~~~~~---  298 (369)
                         .....|....| ..|..++.+.+.          .++..+.+.||+....+............    .....+.   
T Consensus       110 ---~~~~~p~~~~~-~~k~~ie~~l~~----------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (233)
T PF05368_consen  110 ---SSGSEPEIPHF-DQKAEIEEYLRE----------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQK  175 (233)
T ss_dssp             ---TTTSTTHHHHH-HHHHHHHHHHHH----------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSE
T ss_pred             ---cccccccchhh-hhhhhhhhhhhh----------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCcc
Confidence               00112223233 467766554432          36788899999775443322111000000    0000000   


Q ss_pred             hCC-CCHHHHHHHHHHHhcCCCCC-cccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          299 GLL-QSPEKGINSVLDAALAPPET-SGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       299 ~~~-~~~~e~A~~v~~~~l~~~~~-sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      ..+ .+.+|+|+.+..++..++.. .|.++...+ ..+.          .+++-+..++.+|+
T Consensus       176 ~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t----------~~eia~~~s~~~G~  227 (233)
T PF05368_consen  176 AVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLT----------YNEIAAILSKVLGK  227 (233)
T ss_dssp             EEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEE----------HHHHHHHHHHHHTS
T ss_pred             ccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCC----------HHHHHHHHHHHHCC
Confidence            022 38899999999988886655 677776543 3333          34455555555554

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.64  E-value=1.3e-07  Score=87.10  Aligned_cols=84  Identities=17%  Similarity=0.146  Sum_probs=64.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCc---chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ++++|+++|||| ||+|++++..|++.|++ |++++|+.   ++++++.+++.+.+  ..+....+|+++.+++.+.++ 
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~-  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA-  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc-
Confidence            356899999999 69999999999999995 99999997   67777777775443  245566788887766544222 


Q ss_pred             HHHHHhccCCCCCccEEEeccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                                  ..|+||||..+.
T Consensus       199 ------------~~DilINaTp~G  210 (289)
T PRK12548        199 ------------SSDILVNATLVG  210 (289)
T ss_pred             ------------cCCEEEEeCCCC
Confidence                        369999998664

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.55  E-value=1.1e-06  Score=77.88  Aligned_cols=208  Identities=15%  Similarity=0.076  Sum_probs=132.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|-++-|.||||.+|+.++.+|++.|-+|++-.|-.+.-   ..+++-.+.-.++.++..|+.|+++|++++++   
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~---~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~---  130 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD---PRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH---  130 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc---hhheeecccccceeeeccCCCCHHHHHHHHHh---
Confidence            457788999999999999999999999999999999865421   12222233346899999999999999998774   


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                                -+++||-.|.-.+....+      .-+||+.++-.+++.+-..    + --|.|.+|+..+.        
T Consensus       131 ----------sNVVINLIGrd~eTknf~------f~Dvn~~~aerlAricke~----G-VerfIhvS~Lgan--------  181 (391)
T KOG2865|consen  131 ----------SNVVINLIGRDYETKNFS------FEDVNVHIAERLARICKEA----G-VERFIHVSCLGAN--------  181 (391)
T ss_pred             ----------CcEEEEeeccccccCCcc------cccccchHHHHHHHHHHhh----C-hhheeehhhcccc--------
Confidence                      578999988643322222      2457887877776665332    2 3489999997643        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                    ...-+-|--||++-+.-++.   ++     +  ..+.|.|..+.....+-+..+..+-......|+
T Consensus       182 --------------v~s~Sr~LrsK~~gE~aVrd---af-----P--eAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL  237 (391)
T KOG2865|consen  182 --------------VKSPSRMLRSKAAGEEAVRD---AF-----P--EATIIRPADIYGTEDRFLNYYASFWRKFGFLPL  237 (391)
T ss_pred             --------------ccChHHHHHhhhhhHHHHHh---hC-----C--cceeechhhhcccchhHHHHHHHHHHhcCceee
Confidence                          22334577788877654432   22     2  256678887754432222111111000011111


Q ss_pred             h--------CCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017580          299 G--------LLQSPEKGINSVLDAALAPPETSGVYF  326 (369)
Q Consensus       299 ~--------~~~~~~e~A~~v~~~~l~~~~~sG~~~  326 (369)
                      .        ...-+.|+|.+|+.++-.+ .+.|..|
T Consensus       238 ~~~GekT~K~PVyV~DVaa~IvnAvkDp-~s~Gkty  272 (391)
T KOG2865|consen  238 IGKGEKTVKQPVYVVDVAAAIVNAVKDP-DSMGKTY  272 (391)
T ss_pred             ecCCcceeeccEEEehHHHHHHHhccCc-cccCcee
Confidence            1        1233579999999766554 5556666

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.55  E-value=6e-07  Score=86.16  Aligned_cols=201  Identities=15%  Similarity=0.207  Sum_probs=122.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC---CEEEEEeCCcc---hHHHHH--------HHHHhhcCC--CcEEEEEecCC
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSH---LLSETM--------ADITSRNKD--ARLEAFQVDLS  124 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G---~~Vvl~~r~~~---~~~~~~--------~~~~~~~~~--~~v~~~~~Dls  124 (369)
                      +++|+++||||||.+|+-+.++|++.-   -++++.-|...   .-+.+.        +.+.+..|+  .++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            468999999999999999999999874   27788777432   112222        222333333  57888889998


Q ss_pred             ChHHHHHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEE
Q 017580          125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV  204 (369)
Q Consensus       125 ~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~v  204 (369)
                      +++---+-.+.- .      ....+|++||.|+...-     .|.++....+|.+|+..+++.+....+-    ...|.|
T Consensus        90 ~~~LGis~~D~~-~------l~~eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~lak~~~~l----~~~vhV  153 (467)
T KOG1221|consen   90 EPDLGISESDLR-T------LADEVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQLAKEMVKL----KALVHV  153 (467)
T ss_pred             CcccCCChHHHH-H------HHhcCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHHHHHHhhhh----heEEEe
Confidence            765211111100 1      12459999999986532     3556788999999999999887665432    478888


Q ss_pred             cCCccccccc----ccCCCcc-------------cccccc---cc--cCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCC
Q 017580          205 TSFTHRNVFN----AQVNNET-------------ITGKFF---LR--SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  262 (369)
Q Consensus       205 sS~~~~~~~~----~~~~~~~-------------~~~~~~---~~--~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~  262 (369)
                      |+.-......    .....+.             .+....   .+  ..++|  ..|.-+|+..+++...-+        
T Consensus       154 STAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~P--NTYtfTKal~E~~i~~~~--------  223 (467)
T KOG1221|consen  154 STAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWP--NTYTFTKALAEMVIQKEA--------  223 (467)
T ss_pred             ehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCC--CceeehHhhHHHHHHhhc--------
Confidence            8865542110    0000000             000000   00  12233  358888887776654433        


Q ss_pred             CCeEEEEecCCcccCCccccchhHH
Q 017580          263 RHVSVIAADPGVVKTNIMREVPSFL  287 (369)
Q Consensus       263 ~~i~v~~v~PG~v~T~~~~~~~~~~  287 (369)
                      .++.+..++|..|-+......+++.
T Consensus       224 ~~lPivIiRPsiI~st~~EP~pGWi  248 (467)
T KOG1221|consen  224 ENLPLVIIRPSIITSTYKEPFPGWI  248 (467)
T ss_pred             cCCCeEEEcCCceeccccCCCCCcc
Confidence            4566888899888777666665543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.53  E-value=7.1e-07  Score=77.39  Aligned_cols=83  Identities=24%  Similarity=0.266  Sum_probs=65.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++++|+||+|++|+.+++.|++.|++|++++|+.++++++.+++.+..   ......+|..+.+++.+.++     
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~-----   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK-----   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh-----
Confidence            4678999999999999999999999999999999999988888887775432   23455678888777655443     


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                              ..|++|++...
T Consensus        97 --------~~diVi~at~~  107 (194)
T cd01078          97 --------GADVVFAAGAA  107 (194)
T ss_pred             --------cCCEEEECCCC
Confidence                    27888886653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.47  E-value=5.3e-07  Score=86.00  Aligned_cols=108  Identities=15%  Similarity=0.196  Sum_probs=72.5

Q ss_pred             CCCCCEEEEeCC---------------CCc-hHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecC
Q 017580           60 GIKRPVCIVTGA---------------TSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL  123 (369)
Q Consensus        60 ~~~~k~vlITGa---------------s~g-IG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl  123 (369)
                      +++||+++||||               ||| +|.++|++|+.+|++|+++.++....          . ...  ...+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~--~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPG--VKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCC--cEEEEe
Confidence            478999999999               677 99999999999999999988765421          1 122  256899


Q ss_pred             CChHHH-HHHHHHHHHHHhccCCCCCccEEEeccccccCCC-CCCHHhHH---HhhhhhhHHHHHHHHHHh
Q 017580          124 SSFQSV-LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTPEGYD---QMMSTNYIGAFFLTKLLL  189 (369)
Q Consensus       124 s~~~~i-~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~-~~~~~~~~---~~~~vN~~~~~~l~~~~~  189 (369)
                      ++.+++ +.+.++         ..+.+|++|+|||+..... +.....+.   ..+.+|+..+--+++.+.
T Consensus       249 ~~~~~~~~~~~~~---------~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       249 STAEEMLEAALNE---------LAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             ccHHHHHHHHHHh---------hcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence            998888 444433         2357999999999963221 11111122   234566666655555543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.40  E-value=1.6e-06  Score=76.99  Aligned_cols=98  Identities=17%  Similarity=0.212  Sum_probs=65.5

Q ss_pred             CEEEEeCCCCc-hHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~g-IG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .+-.||+.|+| ||.++|++|+++|++|++++|+...        . ..+...+.++.++     +..++.+.+.+    
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~-~~~~~~v~~i~v~-----s~~~m~~~l~~----   77 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------K-PEPHPNLSIIEIE-----NVDDLLETLEP----   77 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------c-CCCCCCeEEEEEe-----cHHHHHHHHHH----
Confidence            46788887766 9999999999999999999876421        0 0012245555542     22333333433    


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHH
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGA  181 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~  181 (369)
                        ..+.+|++|||||+..  +....+.+.+.+++++|.+..
T Consensus        78 --~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         78 --LVKDHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             --HhcCCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence              2346899999999864  333457788888888876554

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.33  E-value=2.7e-06  Score=73.83  Aligned_cols=187  Identities=13%  Similarity=0.108  Sum_probs=120.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH-HHHHh---hcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM-ADITS---RNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~-~~~~~---~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .|++||||-+|-=|..+|.-|+.+|+.|..+-|..+...... +.+-.   .+.+.....+-.|++|...+.+++..++ 
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik-  106 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK-  106 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC-
Confidence            579999999999999999999999999999888665544332 22211   2235678889999999999998888764 


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                                ++=+.|-|...+  ...+.|-.+.+-+|...|+..++.++-..-...+  -|+---|+.. ..++...++
T Consensus       107 ----------PtEiYnLaAQSH--VkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~--VrfYQAstSE-lyGkv~e~P  171 (376)
T KOG1372|consen  107 ----------PTEVYNLAAQSH--VKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK--VRFYQASTSE-LYGKVQEIP  171 (376)
T ss_pred             ----------chhhhhhhhhcc--eEEEeecccceeeccchhhhhHHHHHHhcCcccc--eeEEecccHh-hcccccCCC
Confidence                      455666665432  2234444566788889999999888765433322  3444334322 212111111


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  273 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG  273 (369)
                      .        ++..|+.+.++|+++|.+-..++-..+..+..-.-.||-+|.=+|-
T Consensus       172 Q--------sE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPR  218 (376)
T KOG1372|consen  172 Q--------SETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPR  218 (376)
T ss_pred             c--------ccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence            1        1126778889999999776544333332221111578888887774

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.32  E-value=1e-05  Score=76.55  Aligned_cols=130  Identities=20%  Similarity=0.191  Sum_probs=84.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ..+-.+|+|+||+|++|+-+++.|.++|+.|.++.|+.++.+.... +  ...+.....+..|.....++.....+..  
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~--~~~d~~~~~v~~~~~~~~d~~~~~~~~~--  150 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-V--FFVDLGLQNVEADVVTAIDILKKLVEAV--  150 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-c--cccccccceeeeccccccchhhhhhhhc--
Confidence            4456789999999999999999999999999999999887776654 1  1113344555566555444433322221  


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                            .....+++.++|-.....     +...-..|-+.|+.+++.++...    + -.|+|++||+.+.
T Consensus       151 ------~~~~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~a----G-vk~~vlv~si~~~  205 (411)
T KOG1203|consen  151 ------PKGVVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKA----G-VKRVVLVGSIGGT  205 (411)
T ss_pred             ------cccceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHh----C-CceEEEEEeecCc
Confidence                  123556666666543222     22333456677777777776222    1 3599999998876

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.30  E-value=5.8e-06  Score=85.31  Aligned_cols=171  Identities=13%  Similarity=0.162  Sum_probs=129.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHH---HHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLS---ETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~---~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .|..+|+||-||.|.++|..|..+|+ .+|+++|+.-+.-   ......+..  +.++.+-..|++..+..++++++.. 
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s~- 1844 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEESN- 1844 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHhh-
Confidence            57899999999999999999999999 6999999864321   122333333  6677777789998888888887765 


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            +.+++..++|-|.+.  +-.++.+++.+++.-+-.+.|+.++-+.-.+.-..   -.-+|..||...-      
T Consensus      1845 ------kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~---LdyFv~FSSvscG------ 1909 (2376)
T KOG1202|consen 1845 ------KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE---LDYFVVFSSVSCG------ 1909 (2376)
T ss_pred             ------hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc---cceEEEEEeeccc------
Confidence                  468999999999886  34567789999999999999998876654333322   2478888887755      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  269 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~  269 (369)
                                    .+..+.+.|+-+..+++-+++.-+.+-    -+|+-+.-
T Consensus      1910 --------------RGN~GQtNYG~aNS~MERiceqRr~~G----fPG~AiQW 1944 (2376)
T KOG1202|consen 1910 --------------RGNAGQTNYGLANSAMERICEQRRHEG----FPGTAIQW 1944 (2376)
T ss_pred             --------------CCCCcccccchhhHHHHHHHHHhhhcC----CCcceeee
Confidence                          666788899999999999998765442    45655543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.24  E-value=5.3e-05  Score=68.91  Aligned_cols=185  Identities=13%  Similarity=0.009  Sum_probs=111.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      .++||||||.+|.+++++|.++|++|++..|+.++.....         ..+.+...|+.+++++...++          
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~----------   62 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK----------   62 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc----------
Confidence            5899999999999999999999999999999988765543         467899999999988766544          


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                         +++.+++..+... ...       ......+.+.....+...    .  ...+++.+|+..+.              
T Consensus        63 ---G~~~~~~i~~~~~-~~~-------~~~~~~~~~~~~~a~~a~----~--~~~~~~~~s~~~~~--------------  111 (275)
T COG0702          63 ---GVDGVLLISGLLD-GSD-------AFRAVQVTAVVRAAEAAG----A--GVKHGVSLSVLGAD--------------  111 (275)
T ss_pred             ---cccEEEEEecccc-ccc-------chhHHHHHHHHHHHHHhc----C--CceEEEEeccCCCC--------------
Confidence               4677777776543 111       122233334444444432    1  13477778776644              


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEec-CCcccCCccccchhHHHHHHHHHHHHh----h
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD-PGVVKTNIMREVPSFLSLMAFTVLKLL----G  299 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~-PG~v~T~~~~~~~~~~~~~~~~~~~~~----~  299 (369)
                              ......|..+|...+...++.          ++.-..+. |+++........ . ..........+.    -
T Consensus       112 --------~~~~~~~~~~~~~~e~~l~~s----------g~~~t~lr~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~  171 (275)
T COG0702         112 --------AASPSALARAKAAVEAALRSS----------GIPYTTLRRAAFYLGAGAAFI-E-AAEAAGLPVIPRGIGRL  171 (275)
T ss_pred             --------CCCccHHHHHHHHHHHHHHhc----------CCCeEEEecCeeeeccchhHH-H-HHHhhCCceecCCCCce
Confidence                    123457888998887665443          44433344 444433221100 0 000000000000    1


Q ss_pred             CCCCHHHHHHHHHHHhcCCC
Q 017580          300 LLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~  319 (369)
                      .....+|++..+...+..+.
T Consensus       172 ~~i~~~d~a~~~~~~l~~~~  191 (275)
T COG0702         172 SPIAVDDVAEALAAALDAPA  191 (275)
T ss_pred             eeeEHHHHHHHHHHHhcCCc
Confidence            24678999998886655544

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.14  E-value=7.3e-06  Score=70.39  Aligned_cols=148  Identities=16%  Similarity=0.159  Sum_probs=90.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC---EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF---HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~---~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++++|||++|=+|+++.+.+.+.|.   +.++.+..                       .+|+++.++.++++++.    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------------d~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------------DADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------------cccccchHHHHHHHhcc----
Confidence            5799999999999999999999876   44443321                       38999999999998853    


Q ss_pred             hccCCCCCccEEEeccccccCC---CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc-ccc
Q 017580          141 LDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF-NAQ  216 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~-~~~  216 (369)
                             ++..+|+.|+..+..   .....+-+...+++|    -++++.+..+    + -.++|+..|..-..-+ +.+
T Consensus        55 -------kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in----dNVlhsa~e~----g-v~K~vsclStCIfPdkt~yP  118 (315)
T KOG1431|consen   55 -------KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN----DNVLHSAHEH----G-VKKVVSCLSTCIFPDKTSYP  118 (315)
T ss_pred             -------CCceeeehHhhhcchhhcCCCchHHHhhcceec----hhHHHHHHHh----c-hhhhhhhcceeecCCCCCCC
Confidence                   366788888654322   223444444433332    2222222222    1 1345555554433211 122


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCC
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  259 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~  259 (369)
                      ++..-+..     ..+-|.+..|+-+|..+.-..++.+.+++.
T Consensus       119 IdEtmvh~-----gpphpsN~gYsyAKr~idv~n~aY~~qhg~  156 (315)
T KOG1431|consen  119 IDETMVHN-----GPPHPSNFGYSYAKRMIDVQNQAYRQQHGR  156 (315)
T ss_pred             CCHHHhcc-----CCCCCCchHHHHHHHHHHHHHHHHHHHhCC
Confidence            33222222     255677788999998887777888888764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.11  E-value=1.3e-05  Score=75.66  Aligned_cols=76  Identities=28%  Similarity=0.394  Sum_probs=64.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +.++|.|| |+||+.+|+.|+++| .+|++++|+.+++.++.+..     ..++.+.++|+.+.+.+.+++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence            46899999 999999999999999 79999999999888877664     34899999999998887766552       


Q ss_pred             cCCCCCccEEEecccc
Q 017580          143 SDMHSSIQLLINNAGI  158 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~  158 (369)
                            .|++||++..
T Consensus        69 ------~d~VIn~~p~   78 (389)
T COG1748          69 ------FDLVINAAPP   78 (389)
T ss_pred             ------CCEEEEeCCc
Confidence                  3899999874

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.08  E-value=2.9e-05  Score=63.10  Aligned_cols=78  Identities=22%  Similarity=0.331  Sum_probs=59.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++++++|.|+ ||.|++++..|++.|+ +|+++.|+.++++++.+++    ++..+.++..  .+..      +.+  
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~~--~~~~------~~~--   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIPL--EDLE------EAL--   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEEG--GGHC------HHH--
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----CccccceeeH--HHHH------HHH--
Confidence            678999999998 8999999999999998 5999999999998888887    2334444444  2322      111  


Q ss_pred             HHhccCCCCCccEEEecccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA  160 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~  160 (369)
                              ...|++||+.+...
T Consensus        74 --------~~~DivI~aT~~~~   87 (135)
T PF01488_consen   74 --------QEADIVINATPSGM   87 (135)
T ss_dssp             --------HTESEEEE-SSTTS
T ss_pred             --------hhCCeEEEecCCCC
Confidence                    24899999988753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.06  E-value=1.5e-05  Score=72.93  Aligned_cols=82  Identities=16%  Similarity=0.248  Sum_probs=71.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----CCCEEEEEeCCcchHHHHHHHHHhhcCC--CcEEEEEecCCChHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSR----EGFHVVLVGRSSHLLSETMADITSRNKD--ARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~----~G~~Vvl~~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      -++|-||||.-|..+++++.+    .|..+.+.+||+++++++.+++.+..+.  .+..++.||.+|++++.+++.+   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            589999999999999999999    7889999999999999999999776543  2334889999999999988775   


Q ss_pred             HHhccCCCCCccEEEeccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~  159 (369)
                                -.++|||+|..
T Consensus        84 ----------~~vivN~vGPy   94 (423)
T KOG2733|consen   84 ----------ARVIVNCVGPY   94 (423)
T ss_pred             ----------hEEEEeccccc
Confidence                      45899999965

>PLN00106 malate dehydrogenase

Probab=97.96  E-value=8.5e-05  Score=69.23  Aligned_cols=167  Identities=16%  Similarity=0.165  Sum_probs=100.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .+.|.|||++|.||..+|..|+.+|.  +++++++++.  +....++.....  ..  ...|+++.+++.+         
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~--~~--~i~~~~~~~d~~~---------   82 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINT--PA--QVRGFLGDDQLGD---------   82 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCc--Cc--eEEEEeCCCCHHH---------
Confidence            46899999999999999999998875  7999999872  222223332211  11  2224333332222         


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC-Ccc----cccccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS-FTH----RNVFNA  215 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS-~~~----~~~~~~  215 (369)
                          .....|++|+.||..... .   ...++.+..|+-....+.+.+    .+.. +.+||+++| ..-    ...   
T Consensus        83 ----~l~~aDiVVitAG~~~~~-g---~~R~dll~~N~~i~~~i~~~i----~~~~-p~aivivvSNPvD~~~~i~t---  146 (323)
T PLN00106         83 ----ALKGADLVIIPAGVPRKP-G---MTRDDLFNINAGIVKTLCEAV----AKHC-PNALVNIISNPVNSTVPIAA---  146 (323)
T ss_pred             ----HcCCCCEEEEeCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHH----HHHC-CCeEEEEeCCCccccHHHHH---
Confidence                234599999999985321 2   235667888877765555554    4443 334555554 331    100   


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEe
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  270 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v  270 (369)
                               ....+..++|+...|+.++.-...+...++.++..+ ...|+..++
T Consensus       147 ---------~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~-~~~V~~~Vi  191 (323)
T PLN00106        147 ---------EVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLD-PADVDVPVV  191 (323)
T ss_pred             ---------HHHHHcCCCCcceEEEEecchHHHHHHHHHHHhCCC-hhheEEEEE
Confidence                     001122556777889999877778888899888753 334444333

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.92  E-value=0.00027  Score=59.14  Aligned_cols=198  Identities=15%  Similarity=0.060  Sum_probs=115.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      .+-|.||||-.|..++++..++|+.|+++.||+.+....          ..+.+++.|+.|++++.+.+           
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l-----------   60 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDL-----------   60 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhh-----------
Confidence            477899999999999999999999999999998765432          35678899999998764322           


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                        .+.|++|..-|...+.    .+.  ..-        .-.++++..++... ..|++.|+...+....+. .       
T Consensus        61 --~g~DaVIsA~~~~~~~----~~~--~~~--------k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g-~-------  115 (211)
T COG2910          61 --AGHDAVISAFGAGASD----NDE--LHS--------KSIEALIEALKGAG-VPRLLVVGGAGSLEIDEG-T-------  115 (211)
T ss_pred             --cCCceEEEeccCCCCC----hhH--HHH--------HHHHHHHHHHhhcC-CeeEEEEcCccceEEcCC-c-------
Confidence              3589999888865321    111  111        11455555666544 579999987666522111 0       


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc--chhHHHHHHHHHHHHhh-CC
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE--VPSFLSLMAFTVLKLLG-LL  301 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~-~~  301 (369)
                       .+. ..|.-+...|..+++.- -+.+.|+.+      .++.-+-++|...-.|-.+.  +.-.....   ....-+ -.
T Consensus       116 -rLv-D~p~fP~ey~~~A~~~a-e~L~~Lr~~------~~l~WTfvSPaa~f~PGerTg~yrlggD~l---l~n~~G~Sr  183 (211)
T COG2910         116 -RLV-DTPDFPAEYKPEALAQA-EFLDSLRAE------KSLDWTFVSPAAFFEPGERTGNYRLGGDQL---LVNAKGESR  183 (211)
T ss_pred             -eee-cCCCCchhHHHHHHHHH-HHHHHHhhc------cCcceEEeCcHHhcCCccccCceEeccceE---EEcCCCcee
Confidence             000 12222233344444433 333555543      34778888887665442221  10000000   000000 13


Q ss_pred             CCHHHHHHHHHHHhcCCCC
Q 017580          302 QSPEKGINSVLDAALAPPE  320 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~~~~  320 (369)
                      .+-+|.|-++++-+..+.+
T Consensus       184 IS~aDYAiA~lDe~E~~~h  202 (211)
T COG2910         184 ISYADYAIAVLDELEKPQH  202 (211)
T ss_pred             eeHHHHHHHHHHHHhcccc
Confidence            5788999988876655543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.91  E-value=3.2e-05  Score=74.45  Aligned_cols=76  Identities=29%  Similarity=0.398  Sum_probs=59.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           66 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+|.|| |.+|+.+++.|++++-  +|++.+|+.++++++.+++    ...++...++|+.|.+++.++++         
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~---------   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR---------   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT---------
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh---------
Confidence            689999 9999999999999984  8999999999988887665    26689999999999998776654         


Q ss_pred             CCCCCccEEEeccccc
Q 017580          144 DMHSSIQLLINNAGIL  159 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~  159 (369)
                          ..|++||++|..
T Consensus        67 ----~~dvVin~~gp~   78 (386)
T PF03435_consen   67 ----GCDVVINCAGPF   78 (386)
T ss_dssp             ----TSSEEEE-SSGG
T ss_pred             ----cCCEEEECCccc
Confidence                259999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=97.87  E-value=2.4e-05  Score=69.35  Aligned_cols=36  Identities=22%  Similarity=0.319  Sum_probs=32.3

Q ss_pred             CCCCEEEEeCCC----------------CchHHHHHHHHHHCCCEEEEEeCC
Q 017580           61 IKRPVCIVTGAT----------------SGLGAAAAYALSREGFHVVLVGRS   96 (369)
Q Consensus        61 ~~~k~vlITGas----------------~gIG~~~a~~La~~G~~Vvl~~r~   96 (369)
                      ++||.|+||+|.                |.||.++|++|+++|++|+++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            468999999885                999999999999999999988764

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.87  E-value=0.00035  Score=65.10  Aligned_cols=172  Identities=17%  Similarity=0.166  Sum_probs=98.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++.+.+.|||+.|.||..+|..|+.+|  .++++++++.  .+....++.....  .  ....+.+++.++.+       
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~--~--~~v~~~td~~~~~~-------   72 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT--P--AKVTGYADGELWEK-------   72 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc--C--ceEEEecCCCchHH-------
Confidence            345689999999999999999999776  4899999932  2222233333221  2  23345555433211       


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                            .....|++|++||..... .   +...+.+..|+...-.+++.+    ++.+ ..++|+++|.-.....+... 
T Consensus        73 ------~l~gaDvVVitaG~~~~~-~---~tR~dll~~N~~i~~~i~~~i----~~~~-~~~iviv~SNPvdv~~~~~~-  136 (321)
T PTZ00325         73 ------ALRGADLVLICAGVPRKP-G---MTRDDLFNTNAPIVRDLVAAV----ASSA-PKAIVGIVSNPVNSTVPIAA-  136 (321)
T ss_pred             ------HhCCCCEEEECCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHH----HHHC-CCeEEEEecCcHHHHHHHHH-
Confidence                  124589999999974221 1   235567888887766655554    4443 45777777743321100000 


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  268 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~  268 (369)
                            .......++|....|+.+-.=-.-|-..+++.+..+ +..|+..
T Consensus       137 ------~~~~~~sg~p~~~viG~g~LDs~R~r~~la~~l~v~-~~~V~~~  179 (321)
T PTZ00325        137 ------ETLKKAGVYDPRKLFGVTTLDVVRARKFVAEALGMN-PYDVNVP  179 (321)
T ss_pred             ------hhhhhccCCChhheeechhHHHHHHHHHHHHHhCcC-hhheEEE
Confidence                  000112556777788887333335566677776532 3444433

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.84  E-value=5.9e-05  Score=74.17  Aligned_cols=77  Identities=21%  Similarity=0.298  Sum_probs=58.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++.+.    .+.++..|..+.            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~------------   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPEE------------   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcchh------------
Confidence            46789999999888 99999999999999999999985 3444444444322    356777777751            


Q ss_pred             HHhccCCCCCccEEEeccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~  159 (369)
                            ..+..|++|+++|+.
T Consensus        65 ------~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 ------FLEGVDLVVVSPGVP   79 (450)
T ss_pred             ------HhhcCCEEEECCCCC
Confidence                  124589999999974

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.81  E-value=0.00045  Score=57.33  Aligned_cols=157  Identities=18%  Similarity=0.087  Sum_probs=99.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++.++|.||||-.|..+.+++++.+-  +|+++.|.+....++         +..+.....|++..++..   .    
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~~~a---~----   79 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLSQLA---T----   79 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHHHHH---h----
Confidence            5578899999999999999999999984  899999975321111         446777788987766432   2    


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                            ....+|+++++-|..-..     .+.+....|.+--.+.+.+.    .++.+ -..++.+||..+.        
T Consensus        80 ------~~qg~dV~FcaLgTTRgk-----aGadgfykvDhDyvl~~A~~----AKe~G-ck~fvLvSS~GAd--------  135 (238)
T KOG4039|consen   80 ------NEQGPDVLFCALGTTRGK-----AGADGFYKVDHDYVLQLAQA----AKEKG-CKTFVLVSSAGAD--------  135 (238)
T ss_pred             ------hhcCCceEEEeecccccc-----cccCceEeechHHHHHHHHH----HHhCC-CeEEEEEeccCCC--------
Confidence                  235699999998865111     11222233332222222232    23332 4689999997765        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  280 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~  280 (369)
                                    ......|-..|.-++.=+..|.-         =++..+.||++..+-.
T Consensus       136 --------------~sSrFlY~k~KGEvE~~v~eL~F---------~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  136 --------------PSSRFLYMKMKGEVERDVIELDF---------KHIIILRPGPLLGERT  174 (238)
T ss_pred             --------------cccceeeeeccchhhhhhhhccc---------cEEEEecCcceecccc
Confidence                          12344677788777654433321         1577889999965443

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.77  E-value=0.00035  Score=64.79  Aligned_cols=145  Identities=13%  Similarity=0.099  Sum_probs=84.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|+|+++++|.++++.+...|++|+++++++++.+.+. ++     +..   ..+|..+.+..+.+.+.    . 
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~~~~~----~-  209 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GAD---AVFNYRAEDLADRILAA----T-  209 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCcCHHHHHHHH----c-
Confidence            3789999999999999999999999999999999877655542 22     221   22455554443333221    1 


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                         ...++|++++++|..         ..+..               ...+ ..  .|+++.+++....    ..++...
T Consensus       210 ---~~~~~d~vi~~~~~~---------~~~~~---------------~~~l-~~--~g~~v~~~~~~~~----~~~~~~~  255 (325)
T cd08253         210 ---AGQGVDVIIEVLANV---------NLAKD---------------LDVL-AP--GGRIVVYGSGGLR----GTIPINP  255 (325)
T ss_pred             ---CCCceEEEEECCchH---------HHHHH---------------HHhh-CC--CCEEEEEeecCCc----CCCChhH
Confidence               224699999998731         01111               1122 22  4899999875411    1111111


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  258 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~  258 (369)
                      +    +...........|..+|.....+.+.+...+.
T Consensus       256 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
T cd08253         256 L----MAKEASIRGVLLYTATPEERAAAAEAIAAGLA  288 (325)
T ss_pred             H----HhcCceEEeeehhhcCHHHHHHHHHHHHHHHH
Confidence            0    00012223333677778777777777766654

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.75  E-value=0.0001  Score=68.82  Aligned_cols=48  Identities=29%  Similarity=0.464  Sum_probs=41.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-C-CEEEEEeCCcchHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSRE-G-FHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~-G-~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++++|+|+||||+|.||..++++|+++ | .+|+++.|+.+++.++.+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            578999999999999999999999865 6 48999999988877766554

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.61  E-value=0.00098  Score=62.36  Aligned_cols=80  Identities=20%  Similarity=0.299  Sum_probs=56.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+. .+     +..   ..+|..+.+..+.+.+..     
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----~~~---~~~~~~~~~~~~~~~~~~-----  231 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-EL-----GAD---YVIDYRKEDFVREVRELT-----  231 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---eEEecCChHHHHHHHHHh-----
Confidence            4689999999999999999999999999999999887655432 21     211   224665555444443322     


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ...++|++++++|.
T Consensus       232 ---~~~~~d~~i~~~g~  245 (342)
T cd08266         232 ---GKRGVDVVVEHVGA  245 (342)
T ss_pred             ---CCCCCcEEEECCcH
Confidence               22469999999983

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.60  E-value=0.0003  Score=64.58  Aligned_cols=48  Identities=21%  Similarity=0.248  Sum_probs=42.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADIT  108 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~  108 (369)
                      ++++++++|+|+ ||+|+++++.|+..| .+|++++|+.++.+++.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            466899999997 899999999999999 699999999988888877764

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.57  E-value=0.00065  Score=63.63  Aligned_cols=118  Identities=9%  Similarity=0.098  Sum_probs=67.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC-------CEEEEEeCCcc--hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREG-------FHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G-------~~Vvl~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      .++||||+|.+|..++..|+..|       .+|+++++++.  .++....++....     .....|+....+.      
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~-----~~~~~~~~~~~~~------   72 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA-----FPLLKSVVATTDP------   72 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc-----ccccCCceecCCH------
Confidence            58999999999999999999855       48999999653  1222111111100     0001122221111      


Q ss_pred             HHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFT  208 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~  208 (369)
                       .+      .....|++|+.||..... ..+   -.+.++.|+.    +++.+.+.+.+.. ..+.++.+|...
T Consensus        73 -~~------~l~~aDiVI~tAG~~~~~-~~~---R~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPv  131 (325)
T cd01336          73 -EE------AFKDVDVAILVGAMPRKE-GME---RKDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGNPA  131 (325)
T ss_pred             -HH------HhCCCCEEEEeCCcCCCC-CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecCcH
Confidence             11      234599999999986332 222   2445666654    4455555555542 257788888633

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.52  E-value=0.00037  Score=57.79  Aligned_cols=75  Identities=21%  Similarity=0.335  Sum_probs=54.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++++++|+|+ |++|.++++.|++.| .+|++++|+.++.++..+++....       +..+.++.++.          
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~----------   78 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecchhhc----------
Confidence            45789999998 899999999999996 789999999888877776653321       22333433321          


Q ss_pred             HhccCCCCCccEEEeccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~  159 (369)
                            ....|++|++.+..
T Consensus        79 ------~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 ------LAEADLIINTTPVG   92 (155)
T ss_pred             ------cccCCEEEeCcCCC
Confidence                  13589999999764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.48  E-value=0.00052  Score=59.51  Aligned_cols=162  Identities=15%  Similarity=0.161  Sum_probs=104.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSRE-GF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~-G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +-+...++|||+-|-+|..+|..|-.+ |- +|++.+.-.+..     .....  +   -++-.|+.|..++++++-   
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-----~V~~~--G---PyIy~DILD~K~L~eIVV---  107 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-----NVTDV--G---PYIYLDILDQKSLEEIVV---  107 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-----hhccc--C---CchhhhhhccccHHHhhc---
Confidence            345678999999999999999988665 54 688766543321     11111  1   256678888777666543   


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                              ..+||-+||-.+.....   .+.+..-..+||..|..++++....+      .-+|..=|.+.+........
T Consensus       108 --------n~RIdWL~HfSALLSAv---GE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRN  170 (366)
T KOG2774|consen  108 --------NKRIDWLVHFSALLSAV---GETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRN  170 (366)
T ss_pred             --------ccccceeeeHHHHHHHh---cccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCC
Confidence                    36899999987764322   22334456889999999998876444      23444444455443322322


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCC
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  259 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~  259 (369)
                      +.+++        .-..+...|+.||.-.+.+-+.+..+++.
T Consensus       171 PTPdl--------tIQRPRTIYGVSKVHAEL~GEy~~hrFg~  204 (366)
T KOG2774|consen  171 PTPDL--------TIQRPRTIYGVSKVHAELLGEYFNHRFGV  204 (366)
T ss_pred             CCCCe--------eeecCceeechhHHHHHHHHHHHHhhcCc
Confidence            22222        12245678999999999999988887653

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.43  E-value=0.001  Score=62.59  Aligned_cols=83  Identities=20%  Similarity=0.355  Sum_probs=64.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc---------------------chHHHHHHHHHhhcCCCcEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---------------------HLLSETMADITSRNKDARLE  117 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~---------------------~~~~~~~~~~~~~~~~~~v~  117 (369)
                      .+++++|+|.|+ ||+|..+|+.|+..|. ++++++++.                     .+.+.+.+.+++.+++.+++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            467889999998 6899999999999998 899999863                     46677778888888888899


Q ss_pred             EEEecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          118 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       118 ~~~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      .+..|++. +.+.+++             ...|++|.+..
T Consensus       100 ~~~~~~~~-~~~~~~~-------------~~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVTV-EELEELV-------------KEVDLIIDATD  125 (338)
T ss_pred             EEeccCCH-HHHHHHh-------------cCCCEEEEcCC
Confidence            99888863 3333321             24788887653

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.41  E-value=0.0043  Score=55.09  Aligned_cols=83  Identities=18%  Similarity=0.277  Sum_probs=59.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++.+|+|.|+ ||+|.++++.|++.|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            45678999987 5899999999999998 899987532                   35566677777778878888777


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      ..++. ++...++            ....|++|.+..
T Consensus        88 ~~i~~-~~~~~l~------------~~~~D~VvdaiD  111 (231)
T cd00755          88 EFLTP-DNSEDLL------------GGDPDFVVDAID  111 (231)
T ss_pred             eecCH-hHHHHHh------------cCCCCEEEEcCC
Confidence            66663 3322222            134888887753

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.41  E-value=0.00083  Score=61.36  Aligned_cols=48  Identities=19%  Similarity=0.274  Sum_probs=42.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHh
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  109 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~  109 (369)
                      .++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            35789999999 6999999999999999999999999888888777643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.37  E-value=0.0005  Score=58.82  Aligned_cols=77  Identities=22%  Similarity=0.360  Sum_probs=46.7

Q ss_pred             CCCCEEEEeCC----------------CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCC
Q 017580           61 IKRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS  124 (369)
Q Consensus        61 ~~~k~vlITGa----------------s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls  124 (369)
                      ++||.||||+|                ||-.|.++|++++.+|++|+++..... ..          +...+..+.  +.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~----------~p~~~~~i~--v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP----------PPPGVKVIR--VE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE---S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc----------ccccceEEE--ec
Confidence            46899999988                688999999999999999999987642 11          022444444  44


Q ss_pred             ChHHHHHHHHHHHHHHhccCCCCCccEEEeccccc
Q 017580          125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       125 ~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                      +.++   +.+.+.+.+      ..-|++|++|.+.
T Consensus        68 sa~e---m~~~~~~~~------~~~Di~I~aAAVs   93 (185)
T PF04127_consen   68 SAEE---MLEAVKELL------PSADIIIMAAAVS   93 (185)
T ss_dssp             SHHH---HHHHHHHHG------GGGSEEEE-SB--
T ss_pred             chhh---hhhhhcccc------CcceeEEEecchh
Confidence            4444   444444433      2359999999986

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.36  E-value=0.0083  Score=49.02  Aligned_cols=115  Identities=13%  Similarity=0.231  Sum_probs=75.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.|+||+|.+|..+|..|+..|.  ++++.++++++++....++.....  ........   .+.+.            
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~------------   66 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA------------   66 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG------------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc------------
Confidence            488999999999999999999985  799999999888888877765322  22333333   33332            


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                           ...-|++|..||.... +..+   -.+.++.|..-.    +.+.+.+.+....+.++.+|..
T Consensus        67 -----~~~aDivvitag~~~~-~g~s---R~~ll~~N~~i~----~~~~~~i~~~~p~~~vivvtNP  120 (141)
T PF00056_consen   67 -----LKDADIVVITAGVPRK-PGMS---RLDLLEANAKIV----KEIAKKIAKYAPDAIVIVVTNP  120 (141)
T ss_dssp             -----GTTESEEEETTSTSSS-TTSS---HHHHHHHHHHHH----HHHHHHHHHHSTTSEEEE-SSS
T ss_pred             -----cccccEEEEecccccc-cccc---HHHHHHHhHhHH----HHHHHHHHHhCCccEEEEeCCc
Confidence                 2458999999997522 2222   334456665444    4444444444335778877753

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.33  E-value=0.0028  Score=59.02  Aligned_cols=116  Identities=16%  Similarity=0.231  Sum_probs=75.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .+.|.|+ |++|..+|..|+.+|  .+|++++|++++++....++.....  ...+....   .+.+       .+    
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~-------~l----   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS-------DC----   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH-------Hh----
Confidence            5788896 899999999999999  4899999999998888887765421  12222222   2221       11    


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                            ...|++|+++|..... ..+.   .+.++.|.    -+++.+.+.+.+....+.|+++|...-
T Consensus        67 ------~~aDIVIitag~~~~~-g~~R---~dll~~N~----~i~~~~~~~i~~~~~~~~vivvsNP~d  121 (306)
T cd05291          67 ------KDADIVVITAGAPQKP-GETR---LDLLEKNA----KIMKSIVPKIKASGFDGIFLVASNPVD  121 (306)
T ss_pred             ------CCCCEEEEccCCCCCC-CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecChHH
Confidence                  3489999999975221 2222   23455554    445555565655544678888886543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.32  E-value=0.0056  Score=55.45  Aligned_cols=83  Identities=20%  Similarity=0.318  Sum_probs=54.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++..|+|.|+ ||+|.++|+.|++.|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            56778999987 5899999999999995 899988642                   23345556666666666666653


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                       +.-+++.+.+++.            ...|++|.+.+
T Consensus       107 -~~i~~e~~~~ll~------------~~~D~VIdaiD  130 (268)
T PRK15116        107 -DFITPDNVAEYMS------------AGFSYVIDAID  130 (268)
T ss_pred             -cccChhhHHHHhc------------CCCCEEEEcCC
Confidence             2223343333221            34788877765

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.24  E-value=0.0022  Score=55.90  Aligned_cols=83  Identities=18%  Similarity=0.357  Sum_probs=62.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++++|+|.|+ ||+|.++|+.|+..|. ++++++.+                   ..+.+.+.+.+++.++..++..+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            467788999995 6899999999999998 89999886                   45677777888888888788777


Q ss_pred             EecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       120 ~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      ..++.+ +++.+++             ...|++|.+..
T Consensus        97 ~~~i~~-~~~~~~~-------------~~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA-ENLELLI-------------NNVDLVLDCTD  120 (202)
T ss_pred             hhcCCH-HHHHHHH-------------hCCCEEEECCC
Confidence            766654 2332221             24788887754

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.24  E-value=0.011  Score=55.18  Aligned_cols=114  Identities=13%  Similarity=0.134  Sum_probs=61.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHH-CC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSR-EG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~-~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .++|.||+|+||.+++..|.. .+  ..+++.+|++.. +...-++...  +....+..++-.+   +.   +       
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~--~~~~~i~~~~~~d---~~---~-------   65 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHI--PTAVKIKGFSGED---PT---P-------   65 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcC--CCCceEEEeCCCC---HH---H-------
Confidence            589999999999999998865 33  478899988542 1111122211  1111111122222   11   1       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                         .....|++|.++|...... .+   -.+.+..|....-.+++    .|.+.. ..++|.+.|
T Consensus        66 ---~l~~~DiVIitaG~~~~~~-~~---R~dll~~N~~i~~~ii~----~i~~~~-~~~ivivvs  118 (312)
T PRK05086         66 ---ALEGADVVLISAGVARKPG-MD---RSDLFNVNAGIVKNLVE----KVAKTC-PKACIGIIT  118 (312)
T ss_pred             ---HcCCCCEEEEcCCCCCCCC-CC---HHHHHHHHHHHHHHHHH----HHHHhC-CCeEEEEcc
Confidence               1234999999999853321 22   23456667655544444    444443 334544444

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.24  E-value=0.0059  Score=57.01  Aligned_cols=119  Identities=13%  Similarity=0.213  Sum_probs=79.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCC-CcEEEEEecCCChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++.+.|+|+ |++|..+|..|+.+|.  ++++.++++++++....++....+- .++....   .+.+       .   
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~~-------~---   70 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDYS-------D---   70 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCHH-------H---
Confidence            4678999998 9999999999999996  7999999999988888888764321 1222222   1211       1   


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                             ...-|++|..||.... +..+.   .+.++.|.-    +++.+.+.+.+....+.++++|-...
T Consensus        71 -------~~~adivIitag~~~k-~g~~R---~dll~~N~~----i~~~i~~~i~~~~~~~~vivvsNP~d  126 (315)
T PRK00066         71 -------CKDADLVVITAGAPQK-PGETR---LDLVEKNLK----IFKSIVGEVMASGFDGIFLVASNPVD  126 (315)
T ss_pred             -------hCCCCEEEEecCCCCC-CCCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCcHH
Confidence                   2358999999998522 22332   234555543    44555555555443678888886443

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.22  E-value=0.00056  Score=67.23  Aligned_cols=48  Identities=19%  Similarity=0.187  Sum_probs=38.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHh
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  109 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~  109 (369)
                      ++||+++|||+++ +|.++|+.|+++|++|++.+++........+++..
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~   50 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE   50 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence            5689999999986 99999999999999999999876544444444543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.20  E-value=0.00096  Score=60.89  Aligned_cols=76  Identities=28%  Similarity=0.336  Sum_probs=62.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ...+|-||+|..|.-+|++|+++|.+-++.+||..++..+.+.+     +.+...+.++.  ++.+++.++         
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~~---------   70 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMAS---------   70 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHHh---------
Confidence            57899999999999999999999999999999999999998888     55555566655  444444333         


Q ss_pred             CCCCCccEEEeccccc
Q 017580          144 DMHSSIQLLINNAGIL  159 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~  159 (369)
                          +.++|+||+|.+
T Consensus        71 ----~~~VVlncvGPy   82 (382)
T COG3268          71 ----RTQVVLNCVGPY   82 (382)
T ss_pred             ----cceEEEeccccc
Confidence                478999999975

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.17  E-value=0.0056  Score=57.48  Aligned_cols=79  Identities=22%  Similarity=0.318  Sum_probs=52.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |+++||+||+||+|...+.-....|++++++..+.++.+ ...++     +..   +..|..+.+    +.+++++..  
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd---~vi~y~~~~----~~~~v~~~t--  207 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GAD---HVINYREED----FVEQVRELT--  207 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCC---EEEcCCccc----HHHHHHHHc--
Confidence            899999999999999999999999987777766665544 33332     221   122333333    444444432  


Q ss_pred             cCCCCCccEEEecccc
Q 017580          143 SDMHSSIQLLINNAGI  158 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~  158 (369)
                        ...++|+++...|.
T Consensus       208 --~g~gvDvv~D~vG~  221 (326)
T COG0604         208 --GGKGVDVVLDTVGG  221 (326)
T ss_pred             --CCCCceEEEECCCH
Confidence              12369999998884

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.13  E-value=0.0024  Score=58.74  Aligned_cols=51  Identities=22%  Similarity=0.244  Sum_probs=44.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN  111 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~  111 (369)
                      +++++.|+|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+++....
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            356789999998 6799999999999998 89999999999999888886554

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.13  E-value=0.0034  Score=59.18  Aligned_cols=82  Identities=24%  Similarity=0.413  Sum_probs=62.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc---------------------chHHHHHHHHHhhcCCCcEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---------------------HLLSETMADITSRNKDARLE  117 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~---------------------~~~~~~~~~~~~~~~~~~v~  117 (369)
                      .+++++|+|.|+ ||+|..+|+.|+..|. +|++++.+.                     .+.+.+.+.+++.++..++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            466788999999 7999999999999998 999999863                     45666677777777788888


Q ss_pred             EEEecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecc
Q 017580          118 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       118 ~~~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nA  156 (369)
                      .+..|++. +.+.+++             ...|++|.+.
T Consensus       100 ~~~~~~~~-~~~~~~~-------------~~~DlVid~~  124 (339)
T PRK07688        100 AIVQDVTA-EELEELV-------------TGVDLIIDAT  124 (339)
T ss_pred             EEeccCCH-HHHHHHH-------------cCCCEEEEcC
Confidence            88888864 3333321             2378888774

>cd00704 MDH Malate dehydrogenase

Probab=97.11  E-value=0.004  Score=58.26  Aligned_cols=113  Identities=12%  Similarity=0.134  Sum_probs=69.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHH--H--H
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSV--L--K  131 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i--~--~  131 (369)
                      .|.||||+|.+|..++..|+..|.       ++++.++++  +.+                .....|+.+....  .  .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~----------------~g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL----------------EGVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc----------------ceeeeehhhhcccccCCcE
Confidence            489999999999999999998773       499999986  433                2334444433100  0  0


Q ss_pred             HHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-CCCCeEEEEcCC
Q 017580          132 FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTSF  207 (369)
Q Consensus       132 ~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~~g~IV~vsS~  207 (369)
                      +.....+      .....|++|+.||..... ..+   -.+.+..|+    -+++.+.+.+.+. +..+.++.+|-.
T Consensus        66 i~~~~~~------~~~~aDiVVitAG~~~~~-g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNP  128 (323)
T cd00704          66 ITTDPEE------AFKDVDVAILVGAFPRKP-GME---RADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGNP  128 (323)
T ss_pred             EecChHH------HhCCCCEEEEeCCCCCCc-CCc---HHHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence            0001111      235699999999985322 222   233455554    4556666666665 246788888753

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.11  E-value=0.0054  Score=49.67  Aligned_cols=80  Identities=19%  Similarity=0.367  Sum_probs=61.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeC-------------------CcchHHHHHHHHHhhcCCCcEEEEEec
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGR-------------------SSHLLSETMADITSRNKDARLEAFQVD  122 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~D  122 (369)
                      .++|+|.|+ ||+|.++++.|+..|. ++++++.                   ...+.+.+++.+++.+|..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467888887 6799999999999998 8999874                   235677888888888999999999999


Q ss_pred             CCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       123 ls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      +++ +...++++             ..|++|.+..
T Consensus        81 ~~~-~~~~~~~~-------------~~d~vi~~~d  101 (135)
T PF00899_consen   81 IDE-ENIEELLK-------------DYDIVIDCVD  101 (135)
T ss_dssp             CSH-HHHHHHHH-------------TSSEEEEESS
T ss_pred             ccc-cccccccc-------------CCCEEEEecC
Confidence            843 33443331             3788988754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.10  E-value=0.0009  Score=66.92  Aligned_cols=47  Identities=28%  Similarity=0.427  Sum_probs=41.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            467899999999 69999999999999999999999988877776654

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.09  E-value=0.0052  Score=55.21  Aligned_cols=83  Identities=20%  Similarity=0.321  Sum_probs=61.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++++++.+                   ..+.+.+.+.+.+.+|..++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            467789999999 8999999999999997 88888653                   24566667778888888888888


Q ss_pred             EecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       120 ~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      ...++. +.+.+++             ...|++|.+..
T Consensus       108 ~~~i~~-~~~~~~~-------------~~~DiVi~~~D  131 (245)
T PRK05690        108 NARLDD-DELAALI-------------AGHDLVLDCTD  131 (245)
T ss_pred             eccCCH-HHHHHHH-------------hcCCEEEecCC
Confidence            777753 2222221             24788987763

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.08  E-value=0.011  Score=68.96  Aligned_cols=178  Identities=13%  Similarity=0.128  Sum_probs=110.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+.++.++|++.+++++.+++.+|.++|+.|+.+..... .......     .+..+..+.+.-.+..++...++.+.. 
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1824 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASP-----LASAIASVTLGTIDDTSIEAVIKDIEE- 1824 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-ccccccc-----cccccccccccccchHHHHHHHHhhhc-
Confidence            345788888888999999999999999999877642211 0000000     022333445555566777777777765 


Q ss_pred             HhccCCCCCccEEEeccccccCCC-CCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                           ..+.++.+||-.+...... ..+.......-...+...|.+.|.+.+.+...+ .+.++.||...|..+      
T Consensus      1825 -----~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~~vsr~~G~~g------ 1892 (2582)
T TIGR02813      1825 -----KTAQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA-RASFVTVSRIDGGFG------ 1892 (2582)
T ss_pred             -----cccccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccCC-CeEEEEEEecCCccc------
Confidence                 5678999998777542211 111001111122334456888888777665443 578999998776522      


Q ss_pred             CcccccccccccCCCchhhh--------hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC
Q 017580          219 NETITGKFFLRSKCYPCARI--------YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  273 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~--------Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG  273 (369)
                                    +.....        -....+++.+++|++++|+.   .-.++...+.|.
T Consensus      1893 --------------~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P---~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1893 --------------YSNGDADSGTQQVKAELNQAALAGLTKTLNHEWN---AVFCRALDLAPK 1938 (2582)
T ss_pred             --------------cCCccccccccccccchhhhhHHHHHHhHHHHCC---CCeEEEEeCCCC
Confidence                          111100        12347899999999999996   666777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.08  E-value=0.0035  Score=60.09  Aligned_cols=82  Identities=22%  Similarity=0.383  Sum_probs=62.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++++                   ..+.+.+.+.+.+.++..++..+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            56778888876 7899999999999998 89999987                   567788888888887777777776


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      ..+++ +.+.+++             ...|++|++..
T Consensus       212 ~~~~~-~~~~~~~-------------~~~D~Vv~~~d  234 (376)
T PRK08762        212 ERVTS-DNVEALL-------------QDVDVVVDGAD  234 (376)
T ss_pred             ccCCh-HHHHHHH-------------hCCCEEEECCC
Confidence            66653 2332222             23789988864

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.05  E-value=0.011  Score=55.31  Aligned_cols=163  Identities=10%  Similarity=0.067  Sum_probs=101.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCcc--hHHHHHHHHHhhc-CC-CcEEEEEecCCChHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSH--LLSETMADITSRN-KD-ARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~~--~~~~~~~~~~~~~-~~-~~v~~~~~Dls~~~~i~~~  132 (369)
                      +.|.|+||+|.+|..+|..|+.+|.       ++++.+.++.  +++....++.... +- .++++.   -.+.+     
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~---~~~~~-----   74 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT---DDPNV-----   74 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe---cCcHH-----
Confidence            4689999999999999999999885       6999999543  3555444444321 10 112211   11111     


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCcccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRN  211 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~~~~  211 (369)
                                  ....-|++|..||.... +..+.   .+.+..|+    -+++.+.+.+.+.. ..+.|+++|...-..
T Consensus        75 ------------~~~daDivvitaG~~~k-~g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~  134 (322)
T cd01338          75 ------------AFKDADWALLVGAKPRG-PGMER---ADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTN  134 (322)
T ss_pred             ------------HhCCCCEEEEeCCCCCC-CCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHH
Confidence                        22458999999998522 22232   23455554    45566666666654 267888887533211


Q ss_pred             cccccCCCcccccccccccC-CCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017580          212 VFNAQVNNETITGKFFLRSK-CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  267 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v  267 (369)
                      .+            ...+.. ++|....|+.++.--..+...+++.+..+ ...|+.
T Consensus       135 t~------------~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~-~~~v~~  178 (322)
T cd01338         135 AL------------IAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVP-VTDVKN  178 (322)
T ss_pred             HH------------HHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcC-hhHeEE
Confidence            10            001113 36778899999999999999999998743 445664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.03  E-value=0.0042  Score=58.12  Aligned_cols=116  Identities=16%  Similarity=0.122  Sum_probs=71.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHH--H--H
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLK--F--K  133 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~--~--~  133 (369)
                      +|.|+||+|.+|..++..|+..|.       .++++++++..              ........|+.+......  .  .
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence            378999999999999999998764       59999997542              123344556655441110  0  0


Q ss_pred             HHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-CCCCeEEEEcCCc
Q 017580          134 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTSFT  208 (369)
Q Consensus       134 ~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~~g~IV~vsS~~  208 (369)
                      ....+      .....|++|+.||..... .   +...+.+..|+    .+++.+.+.+.+. +..+.|+++|...
T Consensus        67 ~~~~~------~~~~aDiVVitAG~~~~~-~---~tr~~ll~~N~----~i~k~i~~~i~~~~~~~~iiivvsNPv  128 (324)
T TIGR01758        67 HDPAV------AFTDVDVAILVGAFPRKE-G---MERRDLLSKNV----KIFKEQGRALDKLAKKDCKVLVVGNPA  128 (324)
T ss_pred             CChHH------HhCCCCEEEEcCCCCCCC-C---CcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence            01011      235699999999985321 1   22455566564    4556666666665 2367888888643

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.02  E-value=0.00078  Score=58.57  Aligned_cols=47  Identities=15%  Similarity=0.193  Sum_probs=40.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  106 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~  106 (369)
                      .+++||+++|+|.+ .+|..+|+.|.+.|++|++.+++++++++..++
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            35789999999996 899999999999999999999998776666544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.02  E-value=0.0029  Score=58.04  Aligned_cols=49  Identities=24%  Similarity=0.329  Sum_probs=43.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhh
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR  110 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~  110 (369)
                      .++|+++|.|| ||-|++++..|++.|+ +|+++.|+.++.+++.+.+...
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~  174 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence            45789999998 8899999999999997 7999999999998888777544

>PRK14968 putative methyltransferase; Provisional

Probab=97.02  E-value=0.016  Score=49.42  Aligned_cols=122  Identities=19%  Similarity=0.163  Sum_probs=72.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCc-EEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR-LEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~-v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++.++-.|++.|.   ++..++++|.+|+.++++++..+.+.+.+.......+ +.++.+|+.+.         ..   
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~---   87 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FR---   87 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------cc---
Confidence            36789999988776   5666666789999999999888888777765432222 78888887542         11   


Q ss_pred             hccCCCCCccEEEeccccccCCCCCC-HHhHHHhhhhhhHH---HHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLT-PEGYDQMMSTNYIG---AFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~-~~~~~~~~~vN~~~---~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                           ...+|+++.|........... .+.+...+..+..+   .-.+++.+.+.|+.   +|.++++.+
T Consensus        88 -----~~~~d~vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~---gG~~~~~~~  149 (188)
T PRK14968         88 -----GDKFDVILFNPPYLPTEEEEEWDDWLNYALSGGKDGREVIDRFLDEVGRYLKP---GGRILLLQS  149 (188)
T ss_pred             -----ccCceEEEECCCcCCCCchhhhhhhhhhhhccCcChHHHHHHHHHHHHHhcCC---CeEEEEEEc
Confidence                 136999999987643211111 11122222222222   22345666666654   466665543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.97  E-value=0.006  Score=53.50  Aligned_cols=81  Identities=20%  Similarity=0.302  Sum_probs=60.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc------------------chHHHHHHHHHhhcCCCcEEEEEe
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS------------------HLLSETMADITSRNKDARLEAFQV  121 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~~  121 (369)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++.+.                  .+.+.+.+.+++.++..++..+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            56788999996 7999999999999998 699998862                  456667777777777788888877


Q ss_pred             cCCChHHHHHHHHHHHHHHhccCCCCCccEEEecc
Q 017580          122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       122 Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nA  156 (369)
                      .+++. .+.++             ....|++|.+.
T Consensus       105 ~i~~~-~~~~~-------------~~~~DvVI~a~  125 (212)
T PRK08644        105 KIDED-NIEEL-------------FKDCDIVVEAF  125 (212)
T ss_pred             ecCHH-HHHHH-------------HcCCCEEEECC
Confidence            77652 22222             13478888774

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.96  E-value=0.0042  Score=57.36  Aligned_cols=80  Identities=15%  Similarity=0.219  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+ +++     +..   ..+|..+.+....    +.+.. 
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~----~~~~~-  204 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEE----VKEAT-  204 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHH----HHHHh-
Confidence            368999999999999999999999999999999987765554 222     221   2234443332222    22211 


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+++|++++++|.
T Consensus       205 ---~~~~~d~vi~~~g~  218 (323)
T cd05276         205 ---GGRGVDVILDMVGG  218 (323)
T ss_pred             ---CCCCeEEEEECCch
Confidence               23579999999983

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.95  E-value=0.0035  Score=59.05  Aligned_cols=44  Identities=18%  Similarity=0.135  Sum_probs=37.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA  105 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~  105 (369)
                      .|++++|+||+|++|..++......|++|+.+++++++.+.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            37899999999999999998888889999999998877665544

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.94  E-value=0.0069  Score=53.80  Aligned_cols=83  Identities=23%  Similarity=0.368  Sum_probs=61.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeC-------------------CcchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGR-------------------SSHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++++|+|.|+ ||+|.++|+.|+..|. ++++++.                   ...+.+.+.+.+++.+|..++..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            356788999995 6899999999999998 7888753                   234677778888888888888888


Q ss_pred             EecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       120 ~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      ..+++. +.+.+++             ...|++|.+..
T Consensus        97 ~~~i~~-~~~~~~~-------------~~~DvVi~~~d  120 (228)
T cd00757          97 NERLDA-ENAEELI-------------AGYDLVLDCTD  120 (228)
T ss_pred             cceeCH-HHHHHHH-------------hCCCEEEEcCC
Confidence            877743 3332222             23899998765

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.92  E-value=0.014  Score=52.56  Aligned_cols=103  Identities=21%  Similarity=0.207  Sum_probs=66.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+++++|+|+++ +|.++++.+...|.+|+++++++++.+.+. ++     +..   ..+|..+.+....+.   ..   
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~~~---~~---  197 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-EL-----GAD---HVIDYKEEDLEEELR---LT---  197 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-Hh-----CCc---eeccCCcCCHHHHHH---Hh---
Confidence            478999999999 999999999999999999999876554432 22     111   123443333333322   11   


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                         ..+++|++++++|..                       ...+..++.++.   .|+++.++....
T Consensus       198 ---~~~~~d~vi~~~~~~-----------------------~~~~~~~~~l~~---~G~~v~~~~~~~  236 (271)
T cd05188         198 ---GGGGADVVIDAVGGP-----------------------ETLAQALRLLRP---GGRIVVVGGTSG  236 (271)
T ss_pred             ---cCCCCCEEEECCCCH-----------------------HHHHHHHHhccc---CCEEEEEccCCC
Confidence               346799999998742                       122333344433   589999987654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.88  E-value=0.0031  Score=57.90  Aligned_cols=47  Identities=28%  Similarity=0.348  Sum_probs=41.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADIT  108 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~  108 (369)
                      ++++.++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+++.
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            56889999987 8999999999999997 79999999998888877764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.88  E-value=0.0041  Score=58.22  Aligned_cols=80  Identities=13%  Similarity=0.122  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|.+++|+||+|++|..++......|++|+.+++++++.+.+. ++     +.. .  ..|..+.+...+.....     
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~l-----Ga~-~--vi~~~~~~~~~~~~~~~-----  203 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KL-----GFD-V--AFNYKTVKSLEETLKKA-----  203 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC-E--EEeccccccHHHHHHHh-----
Confidence            3789999999999999999888888999999999877655542 22     222 1  22333322333322222     


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+++|+++.+.|.
T Consensus       204 ---~~~gvdvv~d~~G~  217 (325)
T TIGR02825       204 ---SPDGYDCYFDNVGG  217 (325)
T ss_pred             ---CCCCeEEEEECCCH
Confidence               12469999988873

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.87  E-value=0.0043  Score=58.82  Aligned_cols=80  Identities=18%  Similarity=0.210  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|+||+|++|..++......|++|+.+++++++.+.+.+++     +.. .  ..|-.+.++..+.   +.+.  
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~-~--vi~~~~~~~~~~~---i~~~--  224 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD-E--AFNYKEEPDLDAA---LKRY--  224 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCC-E--EEECCCcccHHHH---HHHH--
Confidence            3789999999999999999888888999999998887765544333     222 1  1233222222222   2221  


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ..+++|+++.+.|
T Consensus       225 ---~~~gvD~v~d~vG  237 (348)
T PLN03154        225 ---FPEGIDIYFDNVG  237 (348)
T ss_pred             ---CCCCcEEEEECCC
Confidence               1246999999887

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.87  E-value=0.0037  Score=57.03  Aligned_cols=51  Identities=22%  Similarity=0.324  Sum_probs=44.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN  111 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~  111 (369)
                      +.+|+.++|.|| ||-+++++..|++.|+ +|+++.|+.++++++.+.+.+.+
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~  174 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG  174 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence            346899999998 6799999999999996 89999999999999998886653

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.86  E-value=0.0075  Score=57.26  Aligned_cols=65  Identities=20%  Similarity=0.297  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++.+|+|.|+ ||+|.++++.|+..|. ++++++.+.                   .+.+.+++.+++.+|..+++.+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            467789999998 7999999999999998 899988643                   5677888888888888888888


Q ss_pred             EecCCC
Q 017580          120 QVDLSS  125 (369)
Q Consensus       120 ~~Dls~  125 (369)
                      ..+++.
T Consensus       104 ~~~i~~  109 (355)
T PRK05597        104 VRRLTW  109 (355)
T ss_pred             EeecCH
Confidence            777764

>PRK06849 hypothetical protein; Provisional

Probab=96.85  E-value=0.0073  Score=58.22  Aligned_cols=39  Identities=21%  Similarity=0.271  Sum_probs=35.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLL  100 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~  100 (369)
                      +.++|||||++.++|..+|+.|.+.|++|++++.++...
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~   41 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL   41 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence            358999999999999999999999999999999886544

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.82  E-value=0.0072  Score=53.56  Aligned_cols=74  Identities=24%  Similarity=0.314  Sum_probs=58.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      .++|.|++ -+|..+|+.|.++|++|++++++++..++..++      ....+.+..|-++++.++++            
T Consensus         2 ~iiIiG~G-~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~a------------   62 (225)
T COG0569           2 KIIIIGAG-RVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEA------------   62 (225)
T ss_pred             EEEEECCc-HHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhc------------
Confidence            56777775 599999999999999999999999887775442      23678999999998866554            


Q ss_pred             CCCCccEEEeccc
Q 017580          145 MHSSIQLLINNAG  157 (369)
Q Consensus       145 ~~~~id~lv~nAG  157 (369)
                      .....|++|...|
T Consensus        63 gi~~aD~vva~t~   75 (225)
T COG0569          63 GIDDADAVVAATG   75 (225)
T ss_pred             CCCcCCEEEEeeC
Confidence            2356788887666

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.80  E-value=0.0075  Score=56.86  Aligned_cols=79  Identities=18%  Similarity=0.236  Sum_probs=52.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |++++|+||+|++|..++......|+ +|+.+++++++.+.+.+++     +... +  .|..+ +++.   +.+++.  
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-v--i~~~~-~~~~---~~i~~~--  220 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-A--INYKT-DNVA---ERLREL--  220 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-E--EECCC-CCHH---HHHHHH--
Confidence            48999999999999999888888898 8999999887766555443     2221 1  23222 2222   222221  


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+++|++++++|.
T Consensus       221 ---~~~gvd~vid~~g~  234 (345)
T cd08293         221 ---CPEGVDVYFDNVGG  234 (345)
T ss_pred             ---CCCCceEEEECCCc
Confidence               12569999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.77  E-value=0.01  Score=50.32  Aligned_cols=59  Identities=24%  Similarity=0.371  Sum_probs=46.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc------------------chHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSS------------------HLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      |+|.|+ ||+|.++++.|++.|. ++++++.+.                  .+.+.+.+.+++.++..++..+...++.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            678886 8999999999999998 799998865                  4555666677777777777777766654

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.76  E-value=0.025  Score=55.98  Aligned_cols=116  Identities=17%  Similarity=0.191  Sum_probs=70.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHH-----H----HH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-----V----LK  131 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~-----i----~~  131 (369)
                      ..+.+|+|+|+ |.+|...+..+...|++|+++++++++++.+.+ +     +.+  ++..|..+.+.     +    ..
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~--~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAE--FLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCe--EEEeccccccccccchhhhcchh
Confidence            35789999998 579999999999999999999999887765543 2     333  23333322110     0    11


Q ss_pred             HHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          132 FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       132 ~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                      +.+...+.+.+  ..+..|++|.++|+.+...                 +..+++..+..|+.   +|+||.++..
T Consensus       234 ~~~~~~~~~~~--~~~gaDVVIetag~pg~~a-----------------P~lit~~~v~~mkp---GgvIVdvg~~  287 (509)
T PRK09424        234 FIKAEMALFAE--QAKEVDIIITTALIPGKPA-----------------PKLITAEMVASMKP---GSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHHh--ccCCCCEEEECCCCCcccC-----------------cchHHHHHHHhcCC---CCEEEEEccC
Confidence            11111111111  2256999999999853211                 22223455666653   5799999874

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.74  E-value=0.0051  Score=59.51  Aligned_cols=47  Identities=13%  Similarity=0.170  Sum_probs=41.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++++++++|.|+ ||+|+.+++.|+..|+ +++++.|+.++.+.+.+++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            467899999999 9999999999999996 7999999988877776654

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.73  E-value=0.02  Score=53.42  Aligned_cols=43  Identities=16%  Similarity=0.135  Sum_probs=37.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~  187 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV  187 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            3689999999999999999999999999999998877655543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.71  E-value=0.015  Score=47.45  Aligned_cols=77  Identities=18%  Similarity=0.312  Sum_probs=57.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      ++|.|+ ||+|.++++.|+..|. ++++++.+                   ..+.+.+++.+++.+|..++..+..++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            788887 8999999999999998 78888753                   24566677777777777888888777765


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       126 ~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      ...        .+      ...+.|++|.+..
T Consensus        81 ~~~--------~~------~~~~~diVi~~~d   98 (143)
T cd01483          81 DNL--------DD------FLDGVDLVIDAID   98 (143)
T ss_pred             hhH--------HH------HhcCCCEEEECCC
Confidence            322        11      1245888887764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.65  E-value=0.0063  Score=54.88  Aligned_cols=74  Identities=16%  Similarity=0.147  Sum_probs=54.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      .++|+|||+- |+.++++|.++|++|+.+.+++...+...        ......+..+..+.+++.+++.+         
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~--------~~g~~~v~~g~l~~~~l~~~l~~---------   63 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP--------IHQALTVHTGALDPQELREFLKR---------   63 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc--------ccCCceEEECCCCHHHHHHHHHh---------
Confidence            5999999998 99999999999999999999876433322        11123455666677766555542         


Q ss_pred             CCCCccEEEecccc
Q 017580          145 MHSSIQLLINNAGI  158 (369)
Q Consensus       145 ~~~~id~lv~nAG~  158 (369)
                        .++|++|+.+..
T Consensus        64 --~~i~~VIDAtHP   75 (256)
T TIGR00715        64 --HSIDILVDATHP   75 (256)
T ss_pred             --cCCCEEEEcCCH
Confidence              569999998864

This enzyme was found to be a monomer by gel filtration.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.63  E-value=0.018  Score=55.01  Aligned_cols=77  Identities=18%  Similarity=0.185  Sum_probs=53.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.++.++|.|+ |.+|+..++.+...|++|++++|++++++.+....     +..   +..+..+.+.+.+.   +    
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~~~l~~~---l----  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGR---IHTRYSNAYEIEDA---V----  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cce---eEeccCCHHHHHHH---H----
Confidence            45677999988 78999999999999999999999987766554433     221   22344454443322   2    


Q ss_pred             hccCCCCCccEEEeccccc
Q 017580          141 LDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~  159 (369)
                            ...|++|+++++.
T Consensus       229 ------~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 ------KRADLLIGAVLIP  241 (370)
T ss_pred             ------ccCCEEEEccccC
Confidence                  2379999998763

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08328 hypothetical protein; Provisional

Probab=96.62  E-value=0.019  Score=51.14  Aligned_cols=64  Identities=27%  Similarity=0.429  Sum_probs=45.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcc--------------------hHHHHHHHHHhhcCCCcEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH--------------------LLSETMADITSRNKDARLEA  118 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~--------------------~~~~~~~~~~~~~~~~~v~~  118 (369)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++++++.+.-                    +.+.+.+.+++.+++.++..
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~  102 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET  102 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence            356788999988 5899999999999997 8989875421                    22223344555566677777


Q ss_pred             EEecCC
Q 017580          119 FQVDLS  124 (369)
Q Consensus       119 ~~~Dls  124 (369)
                      +...++
T Consensus       103 ~~~~~~  108 (231)
T PRK08328        103 FVGRLS  108 (231)
T ss_pred             EeccCC
Confidence            666554

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.62  E-value=0.018  Score=51.47  Aligned_cols=83  Identities=16%  Similarity=0.308  Sum_probs=58.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++++++.+                   ..+.+.+.+.+.+.+|..++..+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            466788999987 5899999999999997 88888753                   23556667777777777777777


Q ss_pred             EecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       120 ~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      ...++. +.+.+++             ...|++|.+..
T Consensus       100 ~~~i~~-~~~~~~~-------------~~~DlVvd~~D  123 (240)
T TIGR02355       100 NAKLDD-AELAALI-------------AEHDIVVDCTD  123 (240)
T ss_pred             eccCCH-HHHHHHh-------------hcCCEEEEcCC
Confidence            665543 2232222             23788887654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.62  E-value=0.011  Score=55.07  Aligned_cols=41  Identities=32%  Similarity=0.336  Sum_probs=36.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      +.+++|+||++++|.++++.+...|++|+.+++++++.+.+
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            67999999999999999999999999999999887655443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08223 hypothetical protein; Validated

Probab=96.59  E-value=0.014  Score=53.26  Aligned_cols=65  Identities=14%  Similarity=0.256  Sum_probs=50.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++.+|+|.|+ ||+|..++..|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..+++.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            356788999988 5899999999999998 88888752                   23556666777777777788877


Q ss_pred             EecCCC
Q 017580          120 QVDLSS  125 (369)
Q Consensus       120 ~~Dls~  125 (369)
                      ...++.
T Consensus       103 ~~~l~~  108 (287)
T PRK08223        103 PEGIGK  108 (287)
T ss_pred             ecccCc
Confidence            777764

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.57  E-value=0.013  Score=54.23  Aligned_cols=60  Identities=18%  Similarity=0.344  Sum_probs=47.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      |+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+++.+++.++..++..+..++++
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~   80 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD   80 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            788887 8999999999999998 78888742                   24566667777777778888888888876


Q ss_pred             h
Q 017580          126 F  126 (369)
Q Consensus       126 ~  126 (369)
                      .
T Consensus        81 ~   81 (312)
T cd01489          81 P   81 (312)
T ss_pred             c
Confidence            3

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.56  E-value=0.013  Score=57.36  Aligned_cols=77  Identities=16%  Similarity=0.201  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecC
Q 017580           60 GIKRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL  123 (369)
Q Consensus        60 ~~~~k~vlITGa----------------s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl  123 (369)
                      +++||.||||+|                ||-.|.++|+.++.+|++|++++-...        +  . +...+.++.+  
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~--~-~p~~v~~i~V--  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------L--A-DPQGVKVIHV--  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------C--C-CCCCceEEEe--
Confidence            478999999998                678999999999999999999875432        0  0 1233444443  


Q ss_pred             CChHHHHHHHHHHHHHHhccCCCCCccEEEeccccc
Q 017580          124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       124 s~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                         ++.+++.+.+.+.      .. .|++|++|.+.
T Consensus       320 ---~ta~eM~~av~~~------~~-~Di~I~aAAVa  345 (475)
T PRK13982        320 ---ESARQMLAAVEAA------LP-ADIAIFAAAVA  345 (475)
T ss_pred             ---cCHHHHHHHHHhh------CC-CCEEEEecccc
Confidence               2344555555552      22 69999999986

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.55  E-value=0.021  Score=49.54  Aligned_cols=63  Identities=19%  Similarity=0.292  Sum_probs=48.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc---------------------chHHHHHHHHHhhcCCCcEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---------------------HLLSETMADITSRNKDARLEA  118 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~---------------------~~~~~~~~~~~~~~~~~~v~~  118 (369)
                      +++.+|+|.|+++ +|.++++.|+..|. ++++++.+.                     .+.+.+.+.+++.+|..+++.
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            5567899998865 99999999999998 688887531                     244556677777888888888


Q ss_pred             EEecCC
Q 017580          119 FQVDLS  124 (369)
Q Consensus       119 ~~~Dls  124 (369)
                      +..++.
T Consensus        96 ~~~~~~  101 (198)
T cd01485          96 VEEDSL  101 (198)
T ss_pred             Eecccc
Confidence            777765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.53  E-value=0.017  Score=53.18  Aligned_cols=48  Identities=21%  Similarity=0.258  Sum_probs=39.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcc---hHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH---LLSETMADIT  108 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~---~~~~~~~~~~  108 (369)
                      ++++|+++|.|| ||-+++++..|+..|+ +|+++.|+.+   +.+++.+++.
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            356899999998 6669999999999997 8999999954   6666666554

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.51  E-value=0.044  Score=51.26  Aligned_cols=120  Identities=15%  Similarity=0.197  Sum_probs=74.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++.+.|.|| |.+|..++..++..| .+|++.+++++.++....++.....  +....+..  -++.+.          
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~--~~d~~~----------   70 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG--TNNYED----------   70 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe--CCCHHH----------
Confidence            4568999998 889999999999999 6999999998765543333322110  11111111  112221          


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                             ...-|++|.++|..... ..+   -.+.+..|.    -+.+.+.+.+.+...++.++++|....
T Consensus        71 -------l~~ADiVVitag~~~~~-g~~---r~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~d  126 (319)
T PTZ00117         71 -------IKDSDVVVITAGVQRKE-EMT---REDLLTING----KIMKSVAESVKKYCPNAFVICVTNPLD  126 (319)
T ss_pred             -------hCCCCEEEECCCCCCCC-CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChHH
Confidence                   13479999999975221 222   234555665    456667776666554567888876553

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.51  E-value=0.02  Score=54.69  Aligned_cols=64  Identities=22%  Similarity=0.389  Sum_probs=52.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++++++.+                   ..+.+.+.+.+.+.++..+++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            466788999988 5899999999999997 89998874                   34667777778888888888888


Q ss_pred             EecCC
Q 017580          120 QVDLS  124 (369)
Q Consensus       120 ~~Dls  124 (369)
                      ...++
T Consensus       117 ~~~i~  121 (370)
T PRK05600        117 RERLT  121 (370)
T ss_pred             eeecC
Confidence            77775

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.50  E-value=0.019  Score=49.81  Aligned_cols=64  Identities=22%  Similarity=0.416  Sum_probs=46.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC---cc---------------hHHHHHHHHHhhcCCCcEEEEEe
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS---SH---------------LLSETMADITSRNKDARLEAFQV  121 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~---~~---------------~~~~~~~~~~~~~~~~~v~~~~~  121 (369)
                      ++.++|+|.|+ ||+|..+|..|++.|. +|++++++   .+               +.+.+.+.+.+.++..++..+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            56788999999 6899999999999998 79999886   21               23333444555566666777666


Q ss_pred             cCCC
Q 017580          122 DLSS  125 (369)
Q Consensus       122 Dls~  125 (369)
                      +++.
T Consensus        98 ~i~~  101 (200)
T TIGR02354        98 KITE  101 (200)
T ss_pred             eCCH
Confidence            6653

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.49  E-value=0.019  Score=49.72  Aligned_cols=63  Identities=17%  Similarity=0.314  Sum_probs=49.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+++.+++.+|..+++.+.
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            55678999986 5599999999999998 78888743                   235666777788888888888877


Q ss_pred             ecCC
Q 017580          121 VDLS  124 (369)
Q Consensus       121 ~Dls  124 (369)
                      ..++
T Consensus        98 ~~~~  101 (197)
T cd01492          98 DDIS  101 (197)
T ss_pred             cCcc
Confidence            6665

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.47  E-value=0.014  Score=53.95  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=36.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE  102 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~  102 (369)
                      .|++++|+|+++++|.+++..+...|++|+++++++++.+.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAA  179 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            36899999999999999999999999999999998776543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.44  E-value=0.027  Score=52.46  Aligned_cols=117  Identities=18%  Similarity=0.230  Sum_probs=69.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCc--chHHHHHHHHHhhcC--CCcEEEEEecCC-ChHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSS--HLLSETMADITSRNK--DARLEAFQVDLS-SFQSVLKFKDSLQ  137 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~--~~~~~~~~~~~~~~~--~~~v~~~~~Dls-~~~~i~~~~~~i~  137 (369)
                      .+.|+|++|.+|..++..|+..|.  +|++++|++  ++++....++.....  +...   .+..+ +.+       .+ 
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d~~-------~l-   70 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSDLS-------DV-   70 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCCHH-------Hh-
Confidence            589999999999999999999996  599999965  555554444433210  1111   11111 111       11 


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                               ..-|++|.++|.... +..+.   .+.++.|+--.....+.    +.+....+.||++++..-
T Consensus        71 ---------~~aDiViitag~p~~-~~~~r---~dl~~~n~~i~~~~~~~----i~~~~~~~~viv~~npvd  125 (309)
T cd05294          71 ---------AGSDIVIITAGVPRK-EGMSR---LDLAKKNAKIVKKYAKQ----IAEFAPDTKILVVTNPVD  125 (309)
T ss_pred             ---------CCCCEEEEecCCCCC-CCCCH---HHHHHHHHHHHHHHHHH----HHHHCCCeEEEEeCCchH
Confidence                     358999999997422 22221   23445555444444444    433333578999887543

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PLN02602 lactate dehydrogenase

Probab=96.41  E-value=0.078  Score=50.17  Aligned_cols=118  Identities=17%  Similarity=0.221  Sum_probs=76.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCC-CcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.|.|+|+ |.+|..+|..|+.+|.  ++++++.++++++....++....+- ....+.. + .+.+       .     
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~-~dy~-------~-----  102 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-S-TDYA-------V-----  102 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-C-CCHH-------H-----
Confidence            58999997 8999999999999985  7999999998888777777654211 1122221 1 1211       1     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                           ...-|++|..||.... +..+.   .+.+..|    .-+++.+.+.+.+....+.++++|-..-
T Consensus       103 -----~~daDiVVitAG~~~k-~g~tR---~dll~~N----~~I~~~i~~~I~~~~p~~ivivvtNPvd  158 (350)
T PLN02602        103 -----TAGSDLCIVTAGARQI-PGESR---LNLLQRN----VALFRKIIPELAKYSPDTILLIVSNPVD  158 (350)
T ss_pred             -----hCCCCEEEECCCCCCC-cCCCH---HHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecCchH
Confidence                 1358999999998522 22232   2334444    3455566666655544688888886543

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.39  E-value=0.0045  Score=43.88  Aligned_cols=34  Identities=26%  Similarity=0.345  Sum_probs=22.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHH-HCCCEEEEEeCCc
Q 017580           64 PVCIVTGATSGLGAAAAYALS-REGFHVVLVGRSS   97 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La-~~G~~Vvl~~r~~   97 (369)
                      |+|||+|+|+|.|++-...++ ..|++.+.++...
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk   74 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEK   74 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence            899999999999999444444 6778888877653

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.38  E-value=0.021  Score=53.32  Aligned_cols=43  Identities=16%  Similarity=0.193  Sum_probs=36.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      .|.+++|+||+|++|..++......|++|+.+++++++.+.+.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~  185 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK  185 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            3789999999999999998888889999999998887655543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.36  E-value=0.1  Score=48.59  Aligned_cols=118  Identities=16%  Similarity=0.173  Sum_probs=76.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCC-cEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ..|.|+|+ |.+|..+|..|+..|.  ++++++.++++++....++....+-. ...+...  .|.+       .     
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-------~-----   68 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-------V-----   68 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-------H-----
Confidence            46899997 9999999999999985  79999999988887777776543111 1122211  1222       1     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                           ...-|++|..||.... +..+.   .+.+..|.    -+++.+.+.+.+....+.++++|....
T Consensus        69 -----~~~adivvitaG~~~k-~g~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvsNP~d  124 (312)
T cd05293          69 -----TANSKVVIVTAGARQN-EGESR---LDLVQRNV----DIFKGIIPKLVKYSPNAILLVVSNPVD  124 (312)
T ss_pred             -----hCCCCEEEECCCCCCC-CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCcEEEEccChHH
Confidence                 1348999999997532 22332   23455553    445556666655554688888886553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.34  E-value=0.073  Score=49.46  Aligned_cols=117  Identities=16%  Similarity=0.157  Sum_probs=70.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .+.|+|++|.+|..+|..|+.+|.  ++++++.+  +++...-++.......+  ...+.- + +++   .+        
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~--i~~~~~-~-~~~---y~--------   64 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAK--VTGYLG-P-EEL---KK--------   64 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcce--EEEecC-C-Cch---HH--------
Confidence            478999999999999999999984  89999998  44444444433221111  111100 0 000   11        


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                        ....-|++|..||.... +..+   -.+.++.|.--.    +.+.+.+.+....+.|+++|...
T Consensus        65 --~~~daDivvitaG~~~k-~g~t---R~dll~~N~~i~----~~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          65 --ALKGADVVVIPAGVPRK-PGMT---RDDLFNINAGIV----RDLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             --hcCCCCEEEEeCCCCCC-CCCC---HHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCch
Confidence              23568999999998522 1222   234566665544    44444444443368899988765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK04148 hypothetical protein; Provisional

Probab=96.25  E-value=0.013  Score=47.09  Aligned_cols=56  Identities=21%  Similarity=0.233  Sum_probs=45.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ  127 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~  127 (369)
                      +++.+++.|.+  -|.++|..|++.|++|++++.++...+.+.+.        .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCCC
Confidence            35789999998  77889999999999999999998865555322        4678899999765

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.23  E-value=0.0094  Score=58.93  Aligned_cols=47  Identities=19%  Similarity=0.297  Sum_probs=40.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++++++++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            356899999996 79999999999999999999999987776665443

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.22  E-value=0.024  Score=53.55  Aligned_cols=80  Identities=20%  Similarity=0.282  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +|+.+||.||+||+|.+.++-....|+..++++++.+..+ ..+++     +.   -...|..+++-+    +++++.  
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l-----GA---d~vvdy~~~~~~----e~~kk~--  221 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL-----GA---DEVVDYKDENVV----ELIKKY--  221 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc-----CC---cEeecCCCHHHH----HHHHhh--
Confidence            5889999999999999999988888955555555544432 22232     22   234677774433    233321  


Q ss_pred             ccCCCCCccEEEeccccc
Q 017580          142 DSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~  159 (369)
                         ..+++|+++-+.|-.
T Consensus       222 ---~~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  222 ---TGKGVDVVLDCVGGS  236 (347)
T ss_pred             ---cCCCccEEEECCCCC
Confidence               247899999999863

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.22  E-value=0.045  Score=50.61  Aligned_cols=41  Identities=27%  Similarity=0.266  Sum_probs=35.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS  101 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~  101 (369)
                      ++.+++++|.|+ |++|+.++..|...|++|++++|+.++.+
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            456899999998 67999999999999999999999976543

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.22  E-value=0.042  Score=54.29  Aligned_cols=114  Identities=18%  Similarity=0.186  Sum_probs=71.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-------------hH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-------------FQ  127 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-------------~~  127 (369)
                      ..+.+++|.|+ |.+|...+..+...|++|++++++.++++.+.+ +     +.  .++..|..+             .+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l-----Ga--~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M-----GA--EFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CC--eEEeccccccccccccceeecCHH
Confidence            44679999997 889999999999999999999999887554432 2     22  344444321             23


Q ss_pred             HHHHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          128 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       128 ~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                      ..+...+.+.+      .....|++|+++-+.+..                 ++.++++..+..|+.   ++.||-+++.
T Consensus       233 ~~~~~~~~~~e------~~~~~DIVI~TalipG~~-----------------aP~Lit~emv~~MKp---GsvIVDlA~d  286 (511)
T TIGR00561       233 FIAAEMELFAA------QAKEVDIIITTALIPGKP-----------------APKLITEEMVDSMKA---GSVIVDLAAE  286 (511)
T ss_pred             HHHHHHHHHHH------HhCCCCEEEECcccCCCC-----------------CCeeehHHHHhhCCC---CCEEEEeeeC
Confidence            23333333333      345699999999443211                 112233444555554   4688889886


Q ss_pred             cc
Q 017580          208 TH  209 (369)
Q Consensus       208 ~~  209 (369)
                      .|
T Consensus       287 ~G  288 (511)
T TIGR00561       287 QG  288 (511)
T ss_pred             CC
Confidence            54

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.22  E-value=0.082  Score=48.07  Aligned_cols=106  Identities=18%  Similarity=0.232  Sum_probs=72.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|+|++|+||+|+.|.-...----+|++||.++-.+++..-+.+++.-   + .    ..|-..+ ++   .+.+++.  
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf---D-~----~idyk~~-d~---~~~L~~a--  215 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF---D-A----GIDYKAE-DF---AQALKEA--  215 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC---c-e----eeecCcc-cH---HHHHHHH--
Confidence            489999999999999865554445799999999998887777665511   1 1    1233332 22   3333332  


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                         ....||+.+-|.|--                        +..++++.|..   .+||+..+-++++.
T Consensus       216 ---~P~GIDvyfeNVGg~------------------------v~DAv~~~ln~---~aRi~~CG~IS~YN  255 (340)
T COG2130         216 ---CPKGIDVYFENVGGE------------------------VLDAVLPLLNL---FARIPVCGAISQYN  255 (340)
T ss_pred             ---CCCCeEEEEEcCCch------------------------HHHHHHHhhcc---ccceeeeeehhhcC
Confidence               347899999999841                        12346666655   37999999988873

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.19  E-value=0.013  Score=49.24  Aligned_cols=41  Identities=17%  Similarity=0.188  Sum_probs=35.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLL  100 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~  100 (369)
                      +++||.++|.|++.-+|..+++.|.++|++|+++.|+.+.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l   81 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNL   81 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhH
Confidence            57899999999976679999999999999999999985433

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.19  E-value=0.024  Score=52.51  Aligned_cols=42  Identities=24%  Similarity=0.254  Sum_probs=36.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      ++++++|+|+++++|.+++..+...|++|+.++++.++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            367999999999999999999999999999999987665544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.18  E-value=0.062  Score=48.81  Aligned_cols=119  Identities=15%  Similarity=0.166  Sum_probs=73.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCC----CEEEEEeCCcchHHHHHHHHHhhcCCC-cEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREG----FHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G----~~Vvl~~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.|.||+|.+|..++..|+..|    .+|++.++++++++....+++...... ...+..  -+|+.      +      
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~--~~d~~------~------   66 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI--TDDPY------E------   66 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE--CCchH------H------
Confidence            4689998899999999999999    689999999988888887776542111 111111  11211      1      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                          ....-|++|..+|..... ..+  . ...+..|    .-+.+.+.+.+.+....+.++++|-....
T Consensus        67 ----~~~~aDiVv~t~~~~~~~-g~~--r-~~~~~~n----~~i~~~i~~~i~~~~p~a~~i~~tNP~d~  124 (263)
T cd00650          67 ----AFKDADVVIITAGVGRKP-GMG--R-LDLLKRN----VPIVKEIGDNIEKYSPDAWIIVVSNPVDI  124 (263)
T ss_pred             ----HhCCCCEEEECCCCCCCc-CCC--H-HHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecCcHHH
Confidence                123589999999975322 111  1 1223333    34445555555554446788888765443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.15  E-value=0.096  Score=50.94  Aligned_cols=116  Identities=9%  Similarity=0.069  Sum_probs=78.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-------CC--EEEEEeCCcchHHHHHHHHHhhc-CC-CcEEEEEecCCChHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSRE-------GF--HVVLVGRSSHLLSETMADITSRN-KD-ARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~-------G~--~Vvl~~r~~~~~~~~~~~~~~~~-~~-~~v~~~~~Dls~~~~i~~~~  133 (369)
                      .|.|+|++|.+|.++|..|+..       |.  +++++++++++++...-+++... +- .++.+. .  .+.+      
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~ye------  172 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DPYE------  172 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CCHH------
Confidence            6999999999999999999998       75  89999999999998888887643 11 122211 1  1222      


Q ss_pred             HHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhc-CCCCCeEEEEcCCc
Q 017580          134 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN-SPVPSRIVNVTSFT  208 (369)
Q Consensus       134 ~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~~~~g~IV~vsS~~  208 (369)
                                 ....-|++|..||.... +..+   -.+.++.|.    -+++.+.+.+.+ ....+.||.+|...
T Consensus       173 -----------~~kdaDiVVitAG~prk-pG~t---R~dLl~~N~----~I~k~i~~~I~~~a~p~~ivIVVsNPv  229 (444)
T PLN00112        173 -----------VFQDAEWALLIGAKPRG-PGME---RADLLDING----QIFAEQGKALNEVASRNVKVIVVGNPC  229 (444)
T ss_pred             -----------HhCcCCEEEECCCCCCC-CCCC---HHHHHHHHH----HHHHHHHHHHHHhcCCCeEEEEcCCcH
Confidence                       23458999999997422 2222   233455554    455666666666 34467888888643

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.14  E-value=0.043  Score=51.03  Aligned_cols=116  Identities=16%  Similarity=0.208  Sum_probs=70.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           66 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |.|+||+|.+|..+|..|+.+|.  +++++++++  .+....++....  ....+..+.-.+  +.       .+     
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~--~~~~i~~~~~~~--~~-------~~-----   63 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP--TAASVKGFSGEE--GL-------EN-----   63 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC--cCceEEEecCCC--ch-------HH-----
Confidence            78999999999999999999985  799999986  222222232211  111111111000  00       01     


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                       ....-|++|..||.... +..+   -.+.+..|+-    +++.+.+.+.+....+.|+++|...
T Consensus        64 -~~~daDivvitaG~~~~-~g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        64 -ALKGADVVVIPAGVPRK-PGMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             -HcCCCCEEEEeCCCCCC-CCcc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence             23568999999997422 2222   2345666665    6666666666655467888888765

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.11  E-value=0.14  Score=47.58  Aligned_cols=116  Identities=15%  Similarity=0.161  Sum_probs=76.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC--C-CcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--D-ARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~--~-~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      |.|.|+ |.+|..+|..|+.+|.  ++++++.++++++....++.....  . .++.+..-|   .+       .     
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~---y~-------~-----   65 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD---YD-------D-----   65 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC---HH-------H-----
Confidence            678898 9999999999999985  799999999888877777765322  1 234444322   22       1     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                           ...-|++|..||.... +..+.+ -.+.++.|    ..+++.+.|.+.+....+.++.+|-..
T Consensus        66 -----~~~aDivvitaG~~~k-pg~tr~-R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvsNPv  122 (307)
T cd05290          66 -----CADADIIVITAGPSID-PGNTDD-RLDLAQTN----AKIIREIMGNITKVTKEAVIILITNPL  122 (307)
T ss_pred             -----hCCCCEEEECCCCCCC-CCCCch-HHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEecCcH
Confidence                 2458999999998522 223311 12334444    456677777777766467777777643

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.11  E-value=0.14  Score=48.03  Aligned_cols=125  Identities=15%  Similarity=0.205  Sum_probs=74.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhh--cCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ++.+.+.|.|| |.+|..+|..++..|. +|++++++++.++....++...  ..+....+...  +|.+       .  
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~~-------~--   71 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNYE-------D--   71 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCHH-------H--
Confidence            34568999995 7799999999999995 9999999988654322222221  11112222211  2211       1  


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCC--CCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSR--LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                              ...-|++|+.+|.......  .+.+ -.+.+..|+    .+.+.+.+.+.+...++.++++|.....
T Consensus        72 --------l~~aDiVI~tag~~~~~~~~~~~~~-r~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~di  133 (321)
T PTZ00082         72 --------IAGSDVVIVTAGLTKRPGKSDKEWN-RDDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPLDV  133 (321)
T ss_pred             --------hCCCCEEEECCCCCCCCCCCcCCCC-HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcHHH
Confidence                    1358999999998532211  1111 133445553    4567777777665545688888875543

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.01  E-value=0.13  Score=47.71  Aligned_cols=117  Identities=19%  Similarity=0.205  Sum_probs=74.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCC-CcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           66 CIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +.|.|+ |++|..+|..|+..|  .+++++++++++++....++...... ........  .+.+       .       
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~-------~-------   63 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA-------D-------   63 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH-------H-------
Confidence            357787 679999999999999  58999999999888888887664322 11222211  1111       1       


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                         ...-|++|.+||.... ...+.   .+.+..|    .-+++.+.+.+++....+.|+++|.....
T Consensus        64 ---l~~aDiVIitag~p~~-~~~~R---~~l~~~n----~~i~~~~~~~i~~~~p~~~viv~sNP~d~  120 (300)
T cd00300          64 ---AADADIVVITAGAPRK-PGETR---LDLINRN----APILRSVITNLKKYGPDAIILVVSNPVDI  120 (300)
T ss_pred             ---hCCCCEEEEcCCCCCC-CCCCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEccChHHH
Confidence               2458999999997522 12222   2334444    34555566666655446888888875543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.99  E-value=0.03  Score=54.60  Aligned_cols=47  Identities=19%  Similarity=0.340  Sum_probs=40.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++.+++++|.|+ |++|..+++.|...|+ +|++++|+.++.+...+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            367899999987 9999999999999997 8999999988776666554

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.96  E-value=0.0057  Score=53.24  Aligned_cols=39  Identities=15%  Similarity=0.346  Sum_probs=34.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      .-+++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            34688999999999 7899999999999999999998754

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.95  E-value=0.016  Score=50.53  Aligned_cols=39  Identities=13%  Similarity=0.264  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      -+++||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3578999999998 46899999999999999999987654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.94  E-value=0.043  Score=51.80  Aligned_cols=76  Identities=16%  Similarity=0.149  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ |++|...+.-+...|+ +|+++++++++++.+. ++     +..   ...|..+. ++.    ++.+  
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l-----Ga~---~vi~~~~~-~~~----~~~~--  231 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM-----GAD---KLVNPQND-DLD----HYKA--  231 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc-----CCc---EEecCCcc-cHH----HHhc--
Confidence            4789999996 8999999988888898 6889999887765443 23     322   12344332 222    2222  


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+.+|+++.++|.
T Consensus       232 ----~~g~~D~vid~~G~  245 (343)
T PRK09880        232 ----EKGYFDVSFEVSGH  245 (343)
T ss_pred             ----cCCCCCEEEECCCC
Confidence                22469999999884

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.93  E-value=0.035  Score=55.91  Aligned_cols=62  Identities=15%  Similarity=0.193  Sum_probs=50.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC----------------------cchHHHHHHHHHhhcCCCcEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS----------------------SHLLSETMADITSRNKDARLE  117 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~----------------------~~~~~~~~~~~~~~~~~~~v~  117 (369)
                      +++.+|+|.|| ||+|..+|+.|+..|. ++++++.+                      ..+.+.+++.+++.+|+.+++
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~  414 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT  414 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence            56788999998 6899999999999998 89998741                      345667778888888888888


Q ss_pred             EEEecC
Q 017580          118 AFQVDL  123 (369)
Q Consensus       118 ~~~~Dl  123 (369)
                      .+...+
T Consensus       415 ~~~~~I  420 (664)
T TIGR01381       415 GHRLTV  420 (664)
T ss_pred             Eeeeee
Confidence            887764

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.89  E-value=0.056  Score=50.46  Aligned_cols=44  Identities=27%  Similarity=0.228  Sum_probs=37.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  106 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~  106 (369)
                      .|++++|+|++ |+|...++.....|++|++++|++++++.+.+.
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l  209 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL  209 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh
Confidence            48999999999 999988887777999999999999887665533

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.89  E-value=0.027  Score=44.00  Aligned_cols=71  Identities=15%  Similarity=0.207  Sum_probs=51.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++..+++.++        .+.++..|.++++.++++            .
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~--------~~~~i~gd~~~~~~l~~a------------~   59 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE--------GVEVIYGDATDPEVLERA------------G   59 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT--------TSEEEES-TTSHHHHHHT------------T
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc--------ccccccccchhhhHHhhc------------C
Confidence            5677875 799999999999777999999998876555432        267899999998876653            2


Q ss_pred             CCCccEEEeccc
Q 017580          146 HSSIQLLINNAG  157 (369)
Q Consensus       146 ~~~id~lv~nAG  157 (369)
                      ..+.+.+|...+
T Consensus        60 i~~a~~vv~~~~   71 (116)
T PF02254_consen   60 IEKADAVVILTD   71 (116)
T ss_dssp             GGCESEEEEESS
T ss_pred             ccccCEEEEccC
Confidence            235677775554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.88  E-value=0.066  Score=47.64  Aligned_cols=60  Identities=15%  Similarity=0.331  Sum_probs=45.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      |+|.| .||+|.++++.|+..|. ++++++.+                   ..+.+.+.+.+++.+|+.++..+..++++
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            67777 57999999999999998 88888752                   23455556667777778888888877765


Q ss_pred             h
Q 017580          126 F  126 (369)
Q Consensus       126 ~  126 (369)
                      .
T Consensus        81 ~   81 (234)
T cd01484          81 E   81 (234)
T ss_pred             h
Confidence            3

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.84  E-value=0.043  Score=53.39  Aligned_cols=47  Identities=19%  Similarity=0.351  Sum_probs=40.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..+++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            367899999998 999999999999999 68999999988776665544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.83  E-value=0.019  Score=52.78  Aligned_cols=42  Identities=29%  Similarity=0.260  Sum_probs=37.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE  102 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~  102 (369)
                      +++|++++|.|+ |++|+++|+.|...|++|++.+|+.++.+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            578999999999 669999999999999999999999765443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.80  E-value=0.043  Score=50.99  Aligned_cols=78  Identities=19%  Similarity=0.214  Sum_probs=52.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +.+++|+|+++++|.+++..+...|++|+.++++.++.+.+ +++     +..   ...|..+.+..+.    +.+..  
T Consensus       143 ~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~----~~~~~--  207 (324)
T cd08244         143 GDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD---VAVDYTRPDWPDQ----VREAL--  207 (324)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC---EEEecCCccHHHH----HHHHc--
Confidence            67999999999999999999999999999999887765544 332     221   1233333332222    22211  


Q ss_pred             cCCCCCccEEEeccc
Q 017580          143 SDMHSSIQLLINNAG  157 (369)
Q Consensus       143 ~~~~~~id~lv~nAG  157 (369)
                        ...++|+++++.|
T Consensus       208 --~~~~~d~vl~~~g  220 (324)
T cd08244         208 --GGGGVTVVLDGVG  220 (324)
T ss_pred             --CCCCceEEEECCC
Confidence              2246999999877

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.78  E-value=0.074  Score=51.00  Aligned_cols=89  Identities=17%  Similarity=0.315  Sum_probs=63.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++++++|.|| |-+|.-+|++|+++|. +|+++.|+.++++++++++.            .+....+++..   .+  
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------------~~~~~l~el~~---~l--  236 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------------AEAVALEELLE---AL--  236 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC------------CeeecHHHHHH---hh--
Confidence            478999999999 4599999999999995 89999999999998888873            12222222222   22  


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhh
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMST  176 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~v  176 (369)
                              ...|++|.+.|...  +-++.+.+++.+..
T Consensus       237 --------~~~DvVissTsa~~--~ii~~~~ve~a~~~  264 (414)
T COG0373         237 --------AEADVVISSTSAPH--PIITREMVERALKI  264 (414)
T ss_pred             --------hhCCEEEEecCCCc--cccCHHHHHHHHhc
Confidence                    34899998887643  34566666665443

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.74  E-value=0.16  Score=43.06  Aligned_cols=76  Identities=20%  Similarity=0.211  Sum_probs=60.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++|++|+=-||+.|+   ++...+-.|+ +|++++.+++.++-+.+...+  ...++.++.+|+++..           
T Consensus        43 ~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~--l~g~v~f~~~dv~~~~-----------  106 (198)
T COG2263          43 DLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEE--LLGDVEFVVADVSDFR-----------  106 (198)
T ss_pred             CcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHh--hCCceEEEEcchhhcC-----------
Confidence            6789999999999875   3334445685 899999999999888888776  3678999999998743           


Q ss_pred             HHhccCCCCCccEEEeccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~  159 (369)
                              ++.|.+|.|.-..
T Consensus       107 --------~~~dtvimNPPFG  119 (198)
T COG2263         107 --------GKFDTVIMNPPFG  119 (198)
T ss_pred             --------CccceEEECCCCc
Confidence                    6788898887543

>PRK07411 hypothetical protein; Validated

Probab=95.73  E-value=0.069  Score=51.41  Aligned_cols=65  Identities=20%  Similarity=0.327  Sum_probs=52.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .++..+|+|.|+ ||+|..+++.|+..|. ++++++.+                   ..+.+.+++.+++.++..++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            466788999988 5899999999999998 89888752                   24567777888888888888888


Q ss_pred             EecCCC
Q 017580          120 QVDLSS  125 (369)
Q Consensus       120 ~~Dls~  125 (369)
                      ...++.
T Consensus       114 ~~~~~~  119 (390)
T PRK07411        114 ETRLSS  119 (390)
T ss_pred             ecccCH
Confidence            877765

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.72  E-value=0.066  Score=51.16  Aligned_cols=79  Identities=9%  Similarity=0.105  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~  139 (369)
                      .|++++|+|+ |+||...+......|+ +|+.+++++++.+.+. ++     +..   ...|..+ .+++.+.+.++.  
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~-----Ga~---~~i~~~~~~~~~~~~v~~~~--  252 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KL-----GAT---DCVNPNDYDKPIQEVIVEIT--  252 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCC---eEEcccccchhHHHHHHHHh--
Confidence            3789999986 8999999988888898 7999999888766553 22     222   1224332 122322222221  


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                            .+.+|+++.++|.
T Consensus       253 ------~~g~d~vid~~G~  265 (368)
T TIGR02818       253 ------DGGVDYSFECIGN  265 (368)
T ss_pred             ------CCCCCEEEECCCC
Confidence                  2369999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK14851 hypothetical protein; Provisional

Probab=95.71  E-value=0.067  Score=55.01  Aligned_cols=82  Identities=13%  Similarity=0.267  Sum_probs=61.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeC-------------------CcchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGR-------------------SSHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++++++.                   ...|.+.+++.+.+.+|..+++.+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            366889999995 6899999999999998 8888874                   123556667777778888889998


Q ss_pred             EecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecc
Q 017580          120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       120 ~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nA  156 (369)
                      ...++. +++.++++             ..|++|.+.
T Consensus       119 ~~~i~~-~n~~~~l~-------------~~DvVid~~  141 (679)
T PRK14851        119 PAGINA-DNMDAFLD-------------GVDVVLDGL  141 (679)
T ss_pred             ecCCCh-HHHHHHHh-------------CCCEEEECC
Confidence            888864 44444432             377877554

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.67  E-value=0.2  Score=46.60  Aligned_cols=119  Identities=16%  Similarity=0.174  Sum_probs=69.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.+.|.|| |-+|..+|..++..|. +|++.+++++.++....++.....  .....+. . -+|.+       .     
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~-~-~~d~~-------~-----   67 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKIT-G-TNDYE-------D-----   67 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEE-e-CCCHH-------H-----
Confidence            36889999 8899999999999875 999999998876654444433211  1111111 1 01211       1     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                           ...-|++|.++|..... ..+.   .+.+.-|.    -+.+.+.+.+.+...++.+|++|.....
T Consensus        68 -----~~~aDiVii~~~~p~~~-~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~viv~tNP~d~  124 (307)
T PRK06223         68 -----IAGSDVVVITAGVPRKP-GMSR---DDLLGINA----KIMKDVAEGIKKYAPDAIVIVVTNPVDA  124 (307)
T ss_pred             -----HCCCCEEEECCCCCCCc-CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcHHH
Confidence                 13479999999975321 2221   22333343    4445555555544335678888765443

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.67  E-value=0.051  Score=50.71  Aligned_cols=46  Identities=24%  Similarity=0.395  Sum_probs=39.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~  107 (369)
                      +.+++++|.|+ |.+|..+++.|...|. +|++++|++++.+++.+++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            56889999998 9999999999999775 7999999988877776664

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.67  E-value=0.082  Score=50.97  Aligned_cols=64  Identities=20%  Similarity=0.272  Sum_probs=49.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++.+|+|.|+ ||+|..+|+.|+..|. ++++++.+                   ..+.+.+++.+.+.++..++..+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            56778999988 5899999999999998 88888752                   235566677777778778887777


Q ss_pred             ecCCC
Q 017580          121 VDLSS  125 (369)
Q Consensus       121 ~Dls~  125 (369)
                      .+++.
T Consensus       119 ~~i~~  123 (392)
T PRK07878        119 FRLDP  123 (392)
T ss_pred             ccCCh
Confidence            66654

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.66  E-value=0.052  Score=51.03  Aligned_cols=77  Identities=22%  Similarity=0.267  Sum_probs=51.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |++++|+|+ |++|..++..+...|++ |+++++++++.+.+ +++     +..   ..+|..+.+ .+++. ++.    
T Consensus       164 g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~---~~i~~~~~~-~~~~~-~~~----  227 (339)
T cd08239         164 RDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD---FVINSGQDD-VQEIR-ELT----  227 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC---EEEcCCcch-HHHHH-HHh----
Confidence            789999986 89999999998889998 99999888776544 333     221   223444433 22222 111    


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ...++|+++.+.|.
T Consensus       228 ---~~~~~d~vid~~g~  241 (339)
T cd08239         228 ---SGAGADVAIECSGN  241 (339)
T ss_pred             ---CCCCCCEEEECCCC
Confidence               22469999998874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.65  E-value=0.076  Score=42.30  Aligned_cols=76  Identities=25%  Similarity=0.374  Sum_probs=53.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHH-CCCEEEE-EeCCc----------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           65 VCIVTGATSGLGAAAAYALSR-EGFHVVL-VGRSS----------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~-~G~~Vvl-~~r~~----------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      .|.|.|++|-+|+.+++.+.+ .|++++. ++|+.                      ..++++.++     .+     +.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D-----Vv   71 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD-----VV   71 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S-----EE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC-----EE
Confidence            489999999999999999999 6778665 45655                      222222222     12     67


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecccc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~  158 (369)
                      .|+|.++.+.+.++...+        .++.+++-..|.
T Consensus        72 IDfT~p~~~~~~~~~~~~--------~g~~~ViGTTG~  101 (124)
T PF01113_consen   72 IDFTNPDAVYDNLEYALK--------HGVPLVIGTTGF  101 (124)
T ss_dssp             EEES-HHHHHHHHHHHHH--------HT-EEEEE-SSS
T ss_pred             EEcCChHHhHHHHHHHHh--------CCCCEEEECCCC
Confidence            899999999998888877        368888888885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.62  E-value=0.069  Score=49.04  Aligned_cols=60  Identities=17%  Similarity=0.234  Sum_probs=47.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      |+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+++.+++.+|+.++..+..++.+
T Consensus         2 VlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            677875 6999999999999998 78888741                   24566667777788888888888888875


Q ss_pred             h
Q 017580          126 F  126 (369)
Q Consensus       126 ~  126 (369)
                      .
T Consensus        81 ~   81 (291)
T cd01488          81 K   81 (291)
T ss_pred             h
Confidence            3

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.61  E-value=0.061  Score=52.88  Aligned_cols=58  Identities=21%  Similarity=0.158  Sum_probs=44.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVL  130 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~  130 (369)
                      .++|.|+ |.+|.++++.|.++|..|++++++++..+.+.+.       ..+.++..|.++.+.++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~   59 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVLR   59 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHHH
Confidence            5888888 8999999999999999999999998876655431       23556667777655443

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.58  E-value=0.059  Score=49.43  Aligned_cols=57  Identities=18%  Similarity=0.283  Sum_probs=42.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC---------------------cchHHHHHHHHHhhcCCCcEEEEEecC
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRS---------------------SHLLSETMADITSRNKDARLEAFQVDL  123 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~---------------------~~~~~~~~~~~~~~~~~~~v~~~~~Dl  123 (369)
                      |+|.|+ ||+|..+|+.|+..|. ++++++.+                     ..+.+.+++.+++.+|..+++.+...+
T Consensus         2 VLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~I   80 (307)
T cd01486           2 CLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSI   80 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeec
Confidence            677777 5899999999999998 78887641                     134556667777777777777776554

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK07877 hypothetical protein; Provisional

Probab=95.56  E-value=0.062  Score=55.50  Aligned_cols=81  Identities=22%  Similarity=0.257  Sum_probs=61.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCC------------------cchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRS------------------SHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~------------------~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++.+|+|.|+ | +|..+|..|+..|.  ++++++.+                  ..|.+.+++.+.+.++..+++.+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            367889999999 4 99999999999994  89998752                  24566677777888888889999


Q ss_pred             EecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecc
Q 017580          120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       120 ~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nA  156 (369)
                      ...++ .+++.++++             ..|++|.+.
T Consensus       182 ~~~i~-~~n~~~~l~-------------~~DlVvD~~  204 (722)
T PRK07877        182 TDGLT-EDNVDAFLD-------------GLDVVVEEC  204 (722)
T ss_pred             eccCC-HHHHHHHhc-------------CCCEEEECC
Confidence            88887 455554432             367777665

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.52  E-value=0.17  Score=46.85  Aligned_cols=117  Identities=15%  Similarity=0.187  Sum_probs=72.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCc-EEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDAR-LEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~-v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|.|+|| |+||..+|..|+.++.  .+++.++++++++....++........ -..+..| .+.+              
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~--------------   65 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE--------------   65 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh--------------
Confidence            5889999 9999999999988874  799999998777777666654321111 1122222 1111              


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                         ....-|++|-.||+.-. +.++.   .+.++.|..=    .+.+.+.+.+...++.++.+|-..
T Consensus        66 ---~~~~aDiVvitAG~prK-pGmtR---~DLl~~Na~I----~~~i~~~i~~~~~d~ivlVvtNPv  121 (313)
T COG0039          66 ---DLKGADIVVITAGVPRK-PGMTR---LDLLEKNAKI----VKDIAKAIAKYAPDAIVLVVTNPV  121 (313)
T ss_pred             ---hhcCCCEEEEeCCCCCC-CCCCH---HHHHHhhHHH----HHHHHHHHHhhCCCeEEEEecCcH
Confidence               23458999999998522 22333   2345566543    344444444444357787777654

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.51  E-value=0.21  Score=46.77  Aligned_cols=115  Identities=12%  Similarity=0.102  Sum_probs=71.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCc--chHHHHHHHHHhhc-CC-CcEEEEEecCCChHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRN-KD-ARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~--~~~~~~~~~~~~~~-~~-~~v~~~~~Dls~~~~i~~~~  133 (369)
                      .|.|+||+|.+|..+|..|+..|.       ++++.+.++  ++++....++.... +. ..+++. .  .+.       
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~--~~~-------   74 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-T--DPE-------   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-c--ChH-------
Confidence            589999999999999999999884       799999965  44666666665432 11 111111 1  111       


Q ss_pred             HHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC-CCeEEEEcCC
Q 017580          134 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTSF  207 (369)
Q Consensus       134 ~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-~g~IV~vsS~  207 (369)
                      +          ....-|++|..||.... +..+   -.+.++.|+-    +++.+.+.+.+... .+.|+++|-.
T Consensus        75 ~----------~~~daDvVVitAG~~~k-~g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsNP  131 (323)
T TIGR01759        75 E----------AFKDVDAALLVGAFPRK-PGME---RADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVGNP  131 (323)
T ss_pred             H----------HhCCCCEEEEeCCCCCC-CCCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCCc
Confidence            1          12458999999998522 2222   2345666654    44555555555543 5788888753

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN00203 glutamyl-tRNA reductase

Probab=95.50  E-value=0.059  Score=53.68  Aligned_cols=46  Identities=22%  Similarity=0.314  Sum_probs=41.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~  107 (369)
                      +.+++++|.|+ |++|..+++.|...|+ +|+++.|+.++.+.+.+++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            67899999999 9999999999999997 7999999998887776554

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.44  E-value=0.085  Score=50.36  Aligned_cols=79  Identities=10%  Similarity=0.120  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCCh-HHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~i~~~~~~i~~~  139 (369)
                      .|.+++|.|+ ++||..++..+...|+ +|+.+++++++.+.+. ++     +..   ...|..+. +++.+.+.++.  
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~-~l-----Ga~---~~i~~~~~~~~~~~~v~~~~--  253 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK-KF-----GAT---DCVNPKDHDKPIQQVLVEMT--  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hc-----CCC---EEEcccccchHHHHHHHHHh--
Confidence            3789999985 8999999999989999 7999999988766442 32     222   12344332 23333333322  


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                            .+++|+++.+.|.
T Consensus       254 ------~~g~d~vid~~g~  266 (368)
T cd08300         254 ------DGGVDYTFECIGN  266 (368)
T ss_pred             ------CCCCcEEEECCCC
Confidence                  2479999998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=95.44  E-value=0.19  Score=38.64  Aligned_cols=75  Identities=21%  Similarity=0.159  Sum_probs=56.1

Q ss_pred             CCEEEEeCCCCc-hHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecC-CChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL-SSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~g-IG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl-s~~~~i~~~~~~i~~~~  140 (369)
                      +++||-.|++.| +..++++  ...|++|+.++.+++.++.+.+...+.....++.++..|+ .+.+             
T Consensus         2 ~~~vLDlGcG~G~~~~~l~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-------------   66 (112)
T PF12847_consen    2 GGRVLDLGCGTGRLSIALAR--LFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPD-------------   66 (112)
T ss_dssp             TCEEEEETTTTSHHHHHHHH--HHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTT-------------
T ss_pred             CCEEEEEcCcCCHHHHHHHh--cCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcc-------------
Confidence            578898998865 3333333  2378999999999999999888886666678999999999 2211             


Q ss_pred             hccCCCCCccEEEecc
Q 017580          141 LDSDMHSSIQLLINNA  156 (369)
Q Consensus       141 ~~~~~~~~id~lv~nA  156 (369)
                          ...+.|+++.+.
T Consensus        67 ----~~~~~D~v~~~~   78 (112)
T PF12847_consen   67 ----FLEPFDLVICSG   78 (112)
T ss_dssp             ----TSSCEEEEEECS
T ss_pred             ----cCCCCCEEEECC
Confidence                346799999877

...

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.42  E-value=0.1  Score=50.66  Aligned_cols=44  Identities=11%  Similarity=0.072  Sum_probs=35.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC---EEEEEeCCcchHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF---HVVLVGRSSHLLSETMA  105 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~---~Vvl~~r~~~~~~~~~~  105 (369)
                      .|.+++|.|++|++|...+..+...|+   +|+++++++++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            368999999999999998876666553   79999999888776554

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK14967 putative methyltransferase; Provisional

Probab=95.42  E-value=0.37  Score=42.52  Aligned_cols=75  Identities=13%  Similarity=0.102  Sum_probs=51.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +..++-.|+++|.   ++..+++.|+ +|++++.++..++.+.+.+...  +.++.++..|+.+.         +     
T Consensus        37 ~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~--~~~~~~~~~d~~~~---------~-----   97 (223)
T PRK14967         37 GRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLA--GVDVDVRRGDWARA---------V-----   97 (223)
T ss_pred             CCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHh--CCeeEEEECchhhh---------c-----
Confidence            5689999987754   3445556676 9999999998887777666544  23566777776431         1     


Q ss_pred             ccCCCCCccEEEeccccc
Q 017580          142 DSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~  159 (369)
                         ..+..|+++.|....
T Consensus        98 ---~~~~fD~Vi~npPy~  112 (223)
T PRK14967         98 ---EFRPFDVVVSNPPYV  112 (223)
T ss_pred             ---cCCCeeEEEECCCCC
Confidence               125699999998653

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.41  E-value=0.11  Score=47.61  Aligned_cols=42  Identities=17%  Similarity=0.080  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      +|++++|.|+++++|.++++.....|++|+.+++++++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            478999999999999999999999999999999887765544

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.40  E-value=0.052  Score=44.18  Aligned_cols=43  Identities=21%  Similarity=0.258  Sum_probs=37.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE  102 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~  102 (369)
                      +++||.++|.|.|.-+|+.++..|.++|++|.++.++...+++
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            5789999999999999999999999999999999876544433

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.40  E-value=0.085  Score=50.66  Aligned_cols=64  Identities=17%  Similarity=0.326  Sum_probs=43.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEEEe
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQV  121 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~  121 (369)
                      ++-.+||.|| ||||-++.+.|+..|+ +|.+++.+.                   +++.-+++..++-+|+.++..+..
T Consensus        11 ~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~Fnpn~~l~~yha   89 (603)
T KOG2013|consen   11 KSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQFNPNIKLVPYHA   89 (603)
T ss_pred             ccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhhhheeehhhcCchHHHHHHHHHHHhCCCCceEeccc
Confidence            4667999998 6899999999999998 788887543                   233333333344444555555555


Q ss_pred             cCCCh
Q 017580          122 DLSSF  126 (369)
Q Consensus       122 Dls~~  126 (369)
                      |+.++
T Consensus        90 nI~e~   94 (603)
T KOG2013|consen   90 NIKEP   94 (603)
T ss_pred             cccCc
Confidence            55555

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.40  E-value=0.11  Score=51.20  Aligned_cols=63  Identities=17%  Similarity=0.251  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLK  131 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~  131 (369)
                      ..+.++|.|+ |.+|..+++.|.+.|.+|++++++++..+.+.++.      ..+.++..|.++++.+++
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~------~~~~~i~gd~~~~~~L~~  292 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL------PNTLVLHGDGTDQELLEE  292 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC------CCCeEEECCCCCHHHHHh
Confidence            4578999999 89999999999999999999999987766554431      245678899998876543

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.39  E-value=0.066  Score=49.86  Aligned_cols=41  Identities=29%  Similarity=0.397  Sum_probs=36.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      +++++|.|+++++|.+++......|++|+.+++++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            67999999999999999999999999999999988765554

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PLN02740 Alcohol dehydrogenase-like

Probab=95.39  E-value=0.087  Score=50.58  Aligned_cols=79  Identities=11%  Similarity=0.122  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChH-HHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ-SVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~-~i~~~~~~i~~~  139 (369)
                      .|++++|.|+ |+||..++..+...|+ +|+++++++++++.+. ++     +...   ..|..+.+ ...+.+.++.  
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-----Ga~~---~i~~~~~~~~~~~~v~~~~--  265 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-----GITD---FINPKDSDKPVHERIREMT--  265 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-----CCcE---EEecccccchHHHHHHHHh--
Confidence            4789999996 8999999998888999 6999999887766553 22     2221   22433321 2322233222  


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                            .+.+|+++.++|.
T Consensus       266 ------~~g~dvvid~~G~  278 (381)
T PLN02740        266 ------GGGVDYSFECAGN  278 (381)
T ss_pred             ------CCCCCEEEECCCC
Confidence                  1369999999984

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.26  E-value=0.075  Score=48.97  Aligned_cols=42  Identities=26%  Similarity=0.305  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            368999999999999999999999999999999887665444

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.24  E-value=0.095  Score=48.68  Aligned_cols=43  Identities=19%  Similarity=0.169  Sum_probs=37.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      .|.+++|.|+++++|.+++......|++++.+.++.++.+.+.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~  181 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR  181 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH
Confidence            3789999999999999999999999999999988877655443

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.23  E-value=0.1  Score=48.26  Aligned_cols=42  Identities=24%  Similarity=0.188  Sum_probs=36.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      .|.+++|.|+++++|.+++......|++|+.+++++++.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            378999999999999999999999999999999887665444

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.21  E-value=0.11  Score=48.20  Aligned_cols=42  Identities=21%  Similarity=0.183  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      .|.+++|.|+++++|.+++..+...|++|+.+++++++.+.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  179 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL  179 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence            368999999999999999999999999999999887765444

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.19  E-value=0.052  Score=46.32  Aligned_cols=44  Identities=30%  Similarity=0.421  Sum_probs=37.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  109 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~  109 (369)
                      +|.|.|| |-+|..+|..++..|++|++.+++++.++...+.++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            3678888 8899999999999999999999999988887777654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.19  E-value=0.15  Score=48.32  Aligned_cols=41  Identities=27%  Similarity=0.311  Sum_probs=36.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      .|++++|.|+ |++|..++......|++|+++++++++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            3789999999 9999999999888999999999988876654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.19  E-value=0.014  Score=44.95  Aligned_cols=37  Identities=22%  Similarity=0.282  Sum_probs=32.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      +++|+.++|.|+ |.+|..=++.|++.|++|++++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            578999999999 8899999999999999999999886

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.16  E-value=0.13  Score=47.85  Aligned_cols=42  Identities=24%  Similarity=0.188  Sum_probs=36.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      .|.+++|.|+++++|.+++......|++|+.+++++++.+.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            378999999999999999998888999999999887665444

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.15  E-value=0.28  Score=45.06  Aligned_cols=65  Identities=18%  Similarity=0.186  Sum_probs=47.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCC-ChHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS-SFQSVLKFKDS  135 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls-~~~~i~~~~~~  135 (369)
                      .|+++.|+|+.| +|.--++.--..|++|+.+++...+-+++.+.+     ++..   -+|.+ |++.++++.+.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-----GAd~---fv~~~~d~d~~~~~~~~  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-----GADV---FVDSTEDPDIMKAIMKT  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-----Ccce---eEEecCCHHHHHHHHHh
Confidence            499999999988 997666666667999999999987778877776     3322   24556 66666655443

>PRK14852 hypothetical protein; Provisional

Probab=95.09  E-value=0.13  Score=54.39  Aligned_cols=82  Identities=18%  Similarity=0.299  Sum_probs=60.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeC-------------------CcchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGR-------------------SSHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.+++.                   ...|.+.+++.+.+.+|..+++.+
T Consensus       329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            366788999995 6899999999999998 8888764                   224666677778888888888888


Q ss_pred             EecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecc
Q 017580          120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       120 ~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nA  156 (369)
                      ...++. +.+.++++             ..|++|.+.
T Consensus       408 ~~~I~~-en~~~fl~-------------~~DiVVDa~  430 (989)
T PRK14852        408 PEGVAA-ETIDAFLK-------------DVDLLVDGI  430 (989)
T ss_pred             ecCCCH-HHHHHHhh-------------CCCEEEECC
Confidence            877754 44444332             377777654

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.06  E-value=0.34  Score=44.95  Aligned_cols=116  Identities=18%  Similarity=0.239  Sum_probs=66.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +.|.|| |.+|..+|..++.+|. +|++.+++++.++....++.....  .....+. . -+|.+       .+      
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~-~-t~d~~-------~l------   64 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVT-G-TNDYE-------DI------   64 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEE-E-cCCHH-------Hh------
Confidence            458898 8899999999999886 999999998765433333332210  1111111 1 01111       11      


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                          ..-|++|.++|..... ..+..   +.+.-|    .-+.+.+.+.+.+...++.+|++|....
T Consensus        65 ----~dADiVIit~g~p~~~-~~~r~---e~~~~n----~~i~~~i~~~i~~~~p~~~iIv~sNP~d  119 (300)
T cd01339          65 ----AGSDVVVITAGIPRKP-GMSRD---DLLGTN----AKIVKEVAENIKKYAPNAIVIVVTNPLD  119 (300)
T ss_pred             ----CCCCEEEEecCCCCCc-CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence                3479999999975322 22221   223334    3455666666655543567778876543

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>KOG2336 consensus Molybdopterin biosynthesis-related protein [Coenzyme transport and metabolism]

Probab=95.06  E-value=0.59  Score=41.93  Aligned_cols=105  Identities=16%  Similarity=0.328  Sum_probs=78.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc------------------chHHHHHHHHHhhcCCCcEEEEEe
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS------------------HLLSETMADITSRNKDARLEAFQV  121 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~~  121 (369)
                      ++.+.|.|.|- ||+|.-.|.-|-+.|. ++++.+.+.                  .+.+.+.+.+...+|+..++.+..
T Consensus        80 IR~~aVAiVGv-GGVGSV~AeMLTRCGIGkLlLfDYDkVElANMNRLFf~P~QaGlsKv~AA~~TL~~iNPDV~iE~hn~  158 (422)
T KOG2336|consen   80 IREFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPDQAGLSKVDAAVQTLAEINPDVVIEVHNY  158 (422)
T ss_pred             HhhheeEEEec-CchhHHHHHHHHhcCcceEEEeecchhhhhcccccccCcccccchHHHHHHHHHHhcCCCeEEEEeec
Confidence            34577888887 6899999999999997 888887532                  234445555666788889999999


Q ss_pred             cCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhH
Q 017580          122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYI  179 (369)
Q Consensus       122 Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~  179 (369)
                      +++..+..+.|.+.|.+  +......++|.+..|.           |.++.-|.+|..
T Consensus       159 NITTvenFd~F~~~is~--g~~~~gkpvDLVLSCV-----------DNfEARMavN~A  203 (422)
T KOG2336|consen  159 NITTVENFDTFTDRISN--GSLCPGKPVDLVLSCV-----------DNFEARMAVNQA  203 (422)
T ss_pred             ceeeehhHHHHHHHhhc--CCCCCCCcceEEeeeh-----------hhHHHHHHHHHH
Confidence            99999999999999876  3333344688887664           556777777643

>PRK05442 malate dehydrogenase; Provisional

Probab=95.04  E-value=0.12  Score=48.55  Aligned_cols=117  Identities=9%  Similarity=0.045  Sum_probs=70.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCcc--hHHHHHHHHHhhc-CC-CcEEEEEecCCChHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSH--LLSETMADITSRN-KD-ARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~~--~~~~~~~~~~~~~-~~-~~v~~~~~Dls~~~~i~~~  132 (369)
                      ..|.|+||+|.+|..+|..|+..|.       .+++.++++.  +++....++.... +- .++.+. .  .+.      
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~y------   75 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-D--DPN------   75 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-c--ChH------
Confidence            4689999999999999999998774       6999999543  3444444443321 10 112111 1  111      


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFT  208 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~  208 (369)
                       +          ....-|++|..||.... +..+   -.+.++.|.    -+++.+.+.+.+.. ..+.++++|...
T Consensus        76 -~----------~~~daDiVVitaG~~~k-~g~t---R~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsNPv  133 (326)
T PRK05442         76 -V----------AFKDADVALLVGARPRG-PGME---RKDLLEANG----AIFTAQGKALNEVAARDVKVLVVGNPA  133 (326)
T ss_pred             -H----------HhCCCCEEEEeCCCCCC-CCCc---HHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence             1          23458999999997422 1222   234455554    45566666666622 357888888543

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.03  E-value=0.14  Score=48.79  Aligned_cols=79  Identities=13%  Similarity=0.157  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCCh-HHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~i~~~~~~i~~~  139 (369)
                      .|.+|+|.|+ +++|..++......|+ +|+.+++++++.+.+ +++     +..   ...|..+. +++.+.+.++.  
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~---~~i~~~~~~~~~~~~v~~~~--  254 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVT---EFVNPKDHDKPVQEVIAEMT--  254 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc---eEEcccccchhHHHHHHHHh--
Confidence            4789999986 8999999988888898 899999988766544 222     221   11233321 23333333322  


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                            .+.+|+++.+.|.
T Consensus       255 ------~~~~d~vid~~G~  267 (369)
T cd08301         255 ------GGGVDYSFECTGN  267 (369)
T ss_pred             ------CCCCCEEEECCCC
Confidence                  2369999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.98  E-value=0.19  Score=46.96  Aligned_cols=38  Identities=18%  Similarity=0.178  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      .++.||++.|.|- |.||+++|+.+..-|++|+..+|..
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~  181 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPG  181 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            4689999999998 7899999999999999999988753

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.98  E-value=0.2  Score=46.57  Aligned_cols=42  Identities=21%  Similarity=0.287  Sum_probs=36.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      .|.+++|+|+++++|.+++..+...|++++.+.+++++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            368999999999999999999999999988888887665554

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.96  E-value=0.16  Score=48.46  Aligned_cols=78  Identities=18%  Similarity=0.223  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ ++||..++..+...|+ +|+++++++++.+.+. ++     +..   ...|..+.+    +.+++.+. 
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~-~~-----Ga~---~~i~~~~~~----~~~~i~~~-  255 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR-EL-----GAT---ATVNAGDPN----AVEQVREL-  255 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-Hc-----CCc---eEeCCCchh----HHHHHHHH-
Confidence            3789999985 8999999888888899 6999999887765442 22     221   123333322    22223321 


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+++|++|.++|.
T Consensus       256 ----~~~g~d~vid~~G~  269 (371)
T cd08281         256 ----TGGGVDYAFEMAGS  269 (371)
T ss_pred             ----hCCCCCEEEECCCC
Confidence                12369999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=94.95  E-value=0.093  Score=56.28  Aligned_cols=77  Identities=25%  Similarity=0.281  Sum_probs=58.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CE-------------EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREG-FH-------------VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ  127 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G-~~-------------Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~  127 (369)
                      +.|.|+|.|| |.||...|+.|++.+ +.             |++++++.++++++.+..      .++..+++|++|.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------~~~~~v~lDv~D~e  640 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------ENAEAVQLDVSDSE  640 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc------CCCceEEeecCCHH
Confidence            4678999998 899999999999864 33             888898887776665542      24678999999988


Q ss_pred             HHHHHHHHHHHHHhccCCCCCccEEEecccc
Q 017580          128 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       128 ~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~  158 (369)
                      ++.++++             .+|++|++...
T Consensus       641 ~L~~~v~-------------~~DaVIsalP~  658 (1042)
T PLN02819        641 SLLKYVS-------------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHhhc-------------CCCEEEECCCc
Confidence            7655433             38999998864

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.95  E-value=0.52  Score=44.30  Aligned_cols=66  Identities=17%  Similarity=0.192  Sum_probs=47.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH---HHHHhhcCCCcEEEEEecCCC
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM---ADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~---~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      ..++|+++.|.|. |.||+++|+.|...|++|++.+|+++......   ..+.+......+.++.+-.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence            4688999999987 56999999999999999999999875432211   122333335566666666554

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.94  E-value=0.17  Score=48.87  Aligned_cols=42  Identities=24%  Similarity=0.168  Sum_probs=35.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      .|.+++|+|+++++|.+++..+...|++++.++++.++.+.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            368999999999999999988888999988888876655443

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.93  E-value=0.14  Score=48.12  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=36.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      +.+++|.|+++++|.+++..+-..|++|+.+.+++++.+.+
T Consensus       166 ~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  206 (341)
T cd08297         166 GDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA  206 (341)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            68999999999999999999999999999999998765543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.91  E-value=0.06  Score=49.11  Aligned_cols=44  Identities=25%  Similarity=0.299  Sum_probs=37.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++.++|.|| ||-+++++..|++.|+ +|+++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            468999997 8999999999999998 6999999998887766553

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.89  E-value=0.12  Score=48.99  Aligned_cols=79  Identities=19%  Similarity=0.257  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++++|.|+ |++|...+......|+ +|+.+++++++.+.+. ++     +..   ...|..+.+..    +.+.+..
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~-----Ga~---~~i~~~~~~~~----~~i~~~~  241 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EF-----GAT---HTVNSSGTDPV----EAIRALT  241 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc---eEEcCCCcCHH----HHHHHHh
Confidence            3789999985 8999999988888898 5999989887665542 22     221   12244333222    2222211


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ...++|+++.++|.
T Consensus       242 ----~~~g~d~vid~~g~  255 (358)
T TIGR03451       242 ----GGFGADVVIDAVGR  255 (358)
T ss_pred             ----CCCCCCEEEECCCC
Confidence                22368999998874

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.88  E-value=0.63  Score=43.33  Aligned_cols=115  Identities=17%  Similarity=0.225  Sum_probs=69.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+.|.|+ |.+|..+|..|+.+|  .+|+++++++++.+....++....+ ........   .+.+       .      
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~------   64 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------D------   64 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------H------
Confidence            3788898 889999999999999  5899999998877655555543211 01112221   1211       1      


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                          ....|++|.++|..... ..+   ..+.+..|.    .+.+.+.+.+.+....|.|++++...
T Consensus        65 ----l~~aDiViita~~~~~~-~~~---r~dl~~~n~----~i~~~~~~~l~~~~~~giiiv~tNP~  119 (308)
T cd05292          65 ----CKGADVVVITAGANQKP-GET---RLDLLKRNV----AIFKEIIPQILKYAPDAILLVVTNPV  119 (308)
T ss_pred             ----hCCCCEEEEccCCCCCC-CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence                14589999999974221 112   223344443    44455555555544468888887643

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=94.88  E-value=0.16  Score=46.48  Aligned_cols=62  Identities=18%  Similarity=0.230  Sum_probs=48.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .+++.+|+|.|+ +|+|.++|+.|+..|. +|.+++.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            356778999988 5899999999999998 78888743                   23556667777778877777777


Q ss_pred             Eec
Q 017580          120 QVD  122 (369)
Q Consensus       120 ~~D  122 (369)
                      ..+
T Consensus        95 ~~~   97 (286)
T cd01491          95 TGP   97 (286)
T ss_pred             ecc
Confidence            655

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=94.88  E-value=0.18  Score=45.01  Aligned_cols=122  Identities=19%  Similarity=0.229  Sum_probs=80.6

Q ss_pred             CCEEEEeCCC-CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas-~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+.|+=.|++ |.+|..+|.+.-.  ++|+++.+.++..+.+.+.++......++.++..|+.+...      ..     
T Consensus        45 ~~~IlDlGaG~G~l~L~la~r~~~--a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~------~~-----  111 (248)
T COG4123          45 KGRILDLGAGNGALGLLLAQRTEK--AKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLK------AL-----  111 (248)
T ss_pred             CCeEEEecCCcCHHHHHHhccCCC--CcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhh------cc-----
Confidence            4566666665 6778887776554  89999999999888888888776667899999999865331      11     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHh----HHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEG----YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~----~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                         .....|++|+|.-+.......+++.    -..+...|+-..+..+..   .++.   +|++.+|..
T Consensus       112 ---~~~~fD~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~~i~~a~~---~lk~---~G~l~~V~r  171 (248)
T COG4123         112 ---VFASFDLIICNPPYFKQGSRLNENPLRAIARHEITLDLEDLIRAAAK---LLKP---GGRLAFVHR  171 (248)
T ss_pred             ---cccccCEEEeCCCCCCCccccCcChhhhhhhhhhcCCHHHHHHHHHH---HccC---CCEEEEEec
Confidence               2356999999997764433322222    233444455544444443   3433   488888875

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.87  E-value=0.36  Score=46.20  Aligned_cols=116  Identities=9%  Similarity=0.060  Sum_probs=73.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-E----EEE----EeCCcchHHHHHHHHHhhc-CC-CcEEEEEecCCChHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF-H----VVL----VGRSSHLLSETMADITSRN-KD-ARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~-~----Vvl----~~r~~~~~~~~~~~~~~~~-~~-~~v~~~~~Dls~~~~i~~~~  133 (369)
                      .|.|+||+|.+|..+|..|+..|. .    |++    +++++++++....++.... +- .++.+..   .+.+      
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~---~~y~------  116 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI---DPYE------  116 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec---CCHH------
Confidence            699999999999999999999884 3    444    4889999888887776542 11 1222111   1211      


Q ss_pred             HHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhc-CCCCCeEEEEcCCc
Q 017580          134 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN-SPVPSRIVNVTSFT  208 (369)
Q Consensus       134 ~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~~~~g~IV~vsS~~  208 (369)
                                 ....-|++|..||.... +..+   -.+.++.|+    -+++.+.+.+.+ .+..+.||++|-..
T Consensus       117 -----------~~kdaDIVVitAG~prk-pg~t---R~dll~~N~----~I~k~i~~~I~~~a~~~~iviVVsNPv  173 (387)
T TIGR01757       117 -----------VFEDADWALLIGAKPRG-PGME---RADLLDING----QIFADQGKALNAVASKNCKVLVVGNPC  173 (387)
T ss_pred             -----------HhCCCCEEEECCCCCCC-CCCC---HHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEcCCcH
Confidence                       12458999999998522 1222   233455554    345556666655 32367888888644

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.83  E-value=0.082  Score=48.33  Aligned_cols=38  Identities=16%  Similarity=0.237  Sum_probs=34.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      +++||.++|.|+|.-+|+-+|..|.++|++|+++.+..
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            57899999999999999999999999999999887653

>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional

Probab=94.82  E-value=4.1  Score=39.35  Aligned_cols=119  Identities=12%  Similarity=0.120  Sum_probs=70.3

Q ss_pred             CCCEEEEeCCCC-chHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCC-CcEEEEEecCCChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATS-GLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas~-gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +|+.||=.|+.+ +++.+    .+..|+ +|+.++.++..++.+.+.+...+-+ .++.++..|+.+.      ..+...
T Consensus       220 ~g~rVLDlfsgtG~~~l~----aa~~ga~~V~~VD~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~~------l~~~~~  289 (396)
T PRK15128        220 ENKRVLNCFSYTGGFAVS----ALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKL------LRTYRD  289 (396)
T ss_pred             CCCeEEEeccCCCHHHHH----HHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHHH------HHHHHh
Confidence            467788777764 44433    234566 8999999999998888887664333 3688888987432      222222


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                            ..++.|++|.|.-....    +.+...    .-..+...+.+...+.++.   +|.++..|..
T Consensus       290 ------~~~~fDlVilDPP~f~~----~k~~l~----~~~~~y~~l~~~a~~lLk~---gG~lv~~scs  341 (396)
T PRK15128        290 ------RGEKFDVIVMDPPKFVE----NKSQLM----GACRGYKDINMLAIQLLNP---GGILLTFSCS  341 (396)
T ss_pred             ------cCCCCCEEEECCCCCCC----ChHHHH----HHHHHHHHHHHHHHHHcCC---CeEEEEEeCC
Confidence                  23579999988754321    222221    1122344455556666543   4666665543

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.81  E-value=0.37  Score=45.36  Aligned_cols=40  Identities=15%  Similarity=0.179  Sum_probs=36.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   99 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~   99 (369)
                      .++.||++.|.|. |.||+++|+.|...|++|+..+|+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            4789999999999 889999999999999999999987643

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.73  E-value=0.074  Score=46.90  Aligned_cols=43  Identities=23%  Similarity=0.299  Sum_probs=37.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++.|.||+|.+|.++++.|++.|++|++.+|++++.+......
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            4889999999999999999999999999999988877665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.71  E-value=0.16  Score=48.11  Aligned_cols=41  Identities=24%  Similarity=0.288  Sum_probs=34.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~  103 (369)
                      .|++++|+| ++++|.+++..+...|+ +|+++++++++.+.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~  218 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA  218 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            478999997 59999999998888999 999999887765433

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.68  E-value=0.38  Score=48.76  Aligned_cols=59  Identities=14%  Similarity=0.148  Sum_probs=47.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLK  131 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~  131 (369)
                      ..++|.|+ |.+|+.++++|.++|.+|+++++|+++.+++.+        .....+..|.+|++..++
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~--------~g~~~i~GD~~~~~~L~~  476 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE--------RGIRAVLGNAANEEIMQL  476 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------CCCeEEEcCCCCHHHHHh
Confidence            45777777 459999999999999999999999887666542        246789999999876554

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.67  E-value=0.17  Score=47.27  Aligned_cols=42  Identities=19%  Similarity=0.211  Sum_probs=33.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      +++++++||++++|..++......|++|+.+++++++.+.+.
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~  185 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK  185 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            456666799999999998877788999999999887665543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.66  E-value=0.19  Score=46.97  Aligned_cols=68  Identities=16%  Similarity=0.148  Sum_probs=47.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHH-----HHHHHhhcCCCcEEEEEecCCCh
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSET-----MADITSRNKDARLEAFQVDLSSF  126 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~-----~~~~~~~~~~~~v~~~~~Dls~~  126 (369)
                      ..++.|||+-|.|. |.||+++|+++..-|++|+..++ ........     ...+.+--..+.+.++.+=++++
T Consensus       137 g~el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~e  210 (324)
T COG0111         137 GTELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPE  210 (324)
T ss_pred             cccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcc
Confidence            34788999999998 56999999999999999999999 33221110     11122222245677777777754

>PLN02827 Alcohol dehydrogenase-like

Probab=94.66  E-value=0.21  Score=47.95  Aligned_cols=79  Identities=9%  Similarity=0.169  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCCh-HHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~i~~~~~~i~~~  139 (369)
                      .|++++|+|+ |++|..++......|+ .|+++++++++.+.+ +++     +.. .  ..|..+. ++..+.+.++.  
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l-----Ga~-~--~i~~~~~~~~~~~~v~~~~--  260 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF-----GVT-D--FINPNDLSEPIQQVIKRMT--  260 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCc-E--EEcccccchHHHHHHHHHh--
Confidence            4789999986 8999999988888898 477788787765443 222     221 1  1343332 23333333221  


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                            .+.+|+++.++|.
T Consensus       261 ------~~g~d~vid~~G~  273 (378)
T PLN02827        261 ------GGGADYSFECVGD  273 (378)
T ss_pred             ------CCCCCEEEECCCC
Confidence                  2369999999884

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.59  E-value=0.1  Score=44.39  Aligned_cols=45  Identities=22%  Similarity=0.208  Sum_probs=37.4

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS  101 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~  101 (369)
                      ....++.|+++.|.|. |.||+++|+.+..-|++|+..+|+.....
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            3455789999999987 78999999999999999999999987543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=94.59  E-value=0.2  Score=38.88  Aligned_cols=114  Identities=18%  Similarity=0.129  Sum_probs=68.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |.+|+--|+++|.   ++..+++.| .+++.++.++...+-+...+.......++.++..|+.+..      +.    + 
T Consensus         1 g~~vlD~~~G~G~---~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~----~-   66 (117)
T PF13659_consen    1 GDRVLDPGCGSGT---FLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGDARDLP------EP----L-   66 (117)
T ss_dssp             TEEEEEETSTTCH---HHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESHHHHHH------HT----C-
T ss_pred             CCEEEEcCcchHH---HHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECchhhch------hh----c-
Confidence            4567777777664   233333345 8999999999988888877776654567899999885431      11    1 


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  205 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vs  205 (369)
                         ..++.|+++.|.-..... ...... .+       ....+++.+.+.++.   +|.+++++
T Consensus        67 ---~~~~~D~Iv~npP~~~~~-~~~~~~-~~-------~~~~~~~~~~~~L~~---gG~~~~~~  115 (117)
T PF13659_consen   67 ---PDGKFDLIVTNPPYGPRS-GDKAAL-RR-------LYSRFLEAAARLLKP---GGVLVFIT  115 (117)
T ss_dssp             ---TTT-EEEEEE--STTSBT-T----G-GC-------HHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred             ---cCceeEEEEECCCCcccc-ccchhh-HH-------HHHHHHHHHHHHcCC---CeEEEEEe
Confidence               347899999998654221 111111 11       333556667777665   46777765

...

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.53  E-value=0.54  Score=43.84  Aligned_cols=73  Identities=15%  Similarity=0.090  Sum_probs=47.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHH---H--HHHHHhhcCCCcEEEEEecCCChHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE---T--MADITSRNKDARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~---~--~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~  133 (369)
                      ..++||++.|.|- |.||+++|+.|...|++|+..+|+.+....   .  ..++.+......+.++.+-++.  +.+.++
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~--~T~~li  208 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTP--ETVGII  208 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCH--HHHHHh
Confidence            4678999999987 569999999999999999999886543211   0  1122222234566666665554  344444


Q ss_pred             H
Q 017580          134 D  134 (369)
Q Consensus       134 ~  134 (369)
                      .
T Consensus       209 ~  209 (312)
T PRK15469        209 N  209 (312)
T ss_pred             H
Confidence            3

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=94.51  E-value=0.55  Score=40.27  Aligned_cols=74  Identities=15%  Similarity=0.178  Sum_probs=54.1

Q ss_pred             CCEEEEeCCCCch-HHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGL-GAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gI-G~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++++-.|++.|. +..++++  ..+++|++++.+++..+.+.+..++.+.+ +++++..|..+..              
T Consensus        46 g~~VLDiGcGtG~~al~la~~--~~~~~V~giD~s~~~l~~A~~~~~~~~l~-~i~~~~~d~~~~~--------------  108 (187)
T PRK00107         46 GERVLDVGSGAGFPGIPLAIA--RPELKVTLVDSLGKKIAFLREVAAELGLK-NVTVVHGRAEEFG--------------  108 (187)
T ss_pred             CCeEEEEcCCCCHHHHHHHHH--CCCCeEEEEeCcHHHHHHHHHHHHHcCCC-CEEEEeccHhhCC--------------
Confidence            6789999998764 6666653  35689999999998888887777665433 4888888885422              


Q ss_pred             ccCCCCCccEEEecc
Q 017580          142 DSDMHSSIQLLINNA  156 (369)
Q Consensus       142 ~~~~~~~id~lv~nA  156 (369)
                         ..++.|+++.++
T Consensus       109 ---~~~~fDlV~~~~  120 (187)
T PRK00107        109 ---QEEKFDVVTSRA  120 (187)
T ss_pred             ---CCCCccEEEEcc
Confidence               114699999875

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.46  E-value=0.2  Score=47.28  Aligned_cols=79  Identities=15%  Similarity=0.236  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++++|+|+ +++|..++..+...|+ +|+++++++++.+.+. ++     +..   ..+|..+.+    +.+++.+..
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~-----ga~---~~i~~~~~~----~~~~l~~~~  237 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-EL-----GAT---IVLDPTEVD----VVAEVRKLT  237 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC---EEECCCccC----HHHHHHHHh
Confidence            3789999985 7999999999999999 8988888877655442 22     222   123444433    222333321


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+.+|+++.++|.
T Consensus       238 ----~~~~~d~vid~~g~  251 (351)
T cd08233         238 ----GGGGVDVSFDCAGV  251 (351)
T ss_pred             ----CCCCCCEEEECCCC
Confidence                22459999999874

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.45  E-value=0.24  Score=47.15  Aligned_cols=44  Identities=25%  Similarity=0.243  Sum_probs=34.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  106 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~  106 (369)
                      .|++|+|.|+ |+||..++......|++|++++.+.++..++.++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~  226 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINR  226 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHh
Confidence            4789999776 8999999998888999998888776655444433

>PRK06932 glycerate dehydrogenase; Provisional

Probab=94.42  E-value=0.33  Score=45.35  Aligned_cols=38  Identities=18%  Similarity=0.233  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      .+++||++.|.|- |.||+++|+.+..-|++|+..+|..
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~  180 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKG  180 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCc
Confidence            4789999999998 7899999999999999999888753

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.41  E-value=0.1  Score=47.99  Aligned_cols=39  Identities=21%  Similarity=0.224  Sum_probs=35.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      +++||.+.|.|.++-+|+.+|..|.++|++|+++.|...
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            578999999999999999999999999999999976654

>PLN02928 oxidoreductase family protein

Probab=94.38  E-value=0.33  Score=45.99  Aligned_cols=39  Identities=18%  Similarity=0.198  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      .++.||++.|.|. |.||+++|+.|...|++|+..+|+..
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            4689999999998 78999999999999999999998743

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=94.37  E-value=0.63  Score=42.36  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++||..|+++|.-...+.+......+|+.++.++..++.+.+...... -.++.++..|+.+..            + 
T Consensus        77 ~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g-~~~v~~~~~d~~~l~------------~-  142 (272)
T PRK11873         77 PGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAG-YTNVEFRLGEIEALP------------V-  142 (272)
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcC-CCCEEEEEcchhhCC------------C-
Confidence            47899999998876444333333334589999999988888777665433 236777777764321            0 


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+.+|+++.|...
T Consensus       143 ---~~~~fD~Vi~~~v~  156 (272)
T PRK11873        143 ---ADNSVDVIISNCVI  156 (272)
T ss_pred             ---CCCceeEEEEcCcc
Confidence               22578999977643

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=94.36  E-value=3.7  Score=36.78  Aligned_cols=161  Identities=13%  Similarity=0.160  Sum_probs=92.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|.+|+|--|.||+|..++..+-..|++++.+..+.++.+.+++.      +.   -+..|.+.+|-+++    +.+.- 
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken------G~---~h~I~y~~eD~v~~----V~kiT-  211 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN------GA---EHPIDYSTEDYVDE----VKKIT-  211 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc------CC---cceeeccchhHHHH----HHhcc-
Confidence            389999999999999999999999999999998887776555432      22   23456666553333    33211 


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                         ...++|++.-..|.         +.+...+               ..++.   .|.+|..+-.++...   +++...
T Consensus       212 ---ngKGVd~vyDsvG~---------dt~~~sl---------------~~Lk~---~G~mVSfG~asgl~~---p~~l~~  258 (336)
T KOG1197|consen  212 ---NGKGVDAVYDSVGK---------DTFAKSL---------------AALKP---MGKMVSFGNASGLID---PIPLNQ  258 (336)
T ss_pred             ---CCCCceeeeccccc---------hhhHHHH---------------HHhcc---CceEEEeccccCCCC---Ceehhh
Confidence               34678888777664         2222211               12222   378888877666522   222222


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  272 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~P  272 (369)
                      +..+.+  ..-.|....|-....-+..++..+-.+.- +..-+|+++.+.|
T Consensus       259 ls~k~l--~lvrpsl~gYi~g~~el~~~v~rl~alvn-sg~lk~~I~~~yp  306 (336)
T KOG1197|consen  259 LSPKAL--QLVRPSLLGYIDGEVELVSYVARLFALVN-SGHLKIHIDHVYP  306 (336)
T ss_pred             cChhhh--hhccHhhhcccCCHHHHHHHHHHHHHHhh-cCccceeeeeecc
Confidence            222111  12234566677777666665554444332 1234556655544

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.34  E-value=0.29  Score=47.12  Aligned_cols=42  Identities=24%  Similarity=0.204  Sum_probs=36.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      .|.+++|+|+++++|.+++......|++++.+++++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            378999999999999999988888999998888887766544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.32  E-value=0.29  Score=44.77  Aligned_cols=40  Identities=33%  Similarity=0.253  Sum_probs=32.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCcchHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSE  102 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~~~~~~  102 (369)
                      .|++++|.|+ |+||..++..+...|++ |+++++++++.+.
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            4789999987 89999999888888986 8888887766543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.31  E-value=0.38  Score=47.08  Aligned_cols=41  Identities=32%  Similarity=0.440  Sum_probs=35.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA  105 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~  105 (369)
                      ++.|.||+|++|.++|+.|.+.|.+|++++|+++...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            58899999999999999999999999999999876544433

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.30  E-value=0.2  Score=47.46  Aligned_cols=34  Identities=32%  Similarity=0.468  Sum_probs=30.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   96 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~   96 (369)
                      .|++|+|+|+ |++|...+..+...|++|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            4789999986 999999998888889999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=94.25  E-value=0.68  Score=42.91  Aligned_cols=113  Identities=17%  Similarity=0.242  Sum_probs=72.4

Q ss_pred             EeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           68 VTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        68 ITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |.|+ |.+|..+|..|+.+|.  ++++.++++++++....++.....  ..++.+..   .+.+                
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~----------------   60 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GDYS----------------   60 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CCHH----------------
Confidence            3455 8899999999999985  799999999988888888765421  12222221   2222                


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                       ....-|++|..||.... +.++.   .+.++.|.-    +++.+.+.+.+....+.|+++|...-
T Consensus        61 -~~~daDivVitag~~rk-~g~~R---~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsNP~d  117 (299)
T TIGR01771        61 -DCKDADLVVITAGAPQK-PGETR---LELVGRNVR----IMKSIVPEVVKSGFDGIFLVATNPVD  117 (299)
T ss_pred             -HHCCCCEEEECCCCCCC-CCCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence             12458999999997422 23332   344555544    44555555555444688888886543

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=94.23  E-value=1.1  Score=37.89  Aligned_cols=94  Identities=16%  Similarity=0.271  Sum_probs=66.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      -+.++=.|++||+=..........+...++++.|+..++...+..+..  +.++..+.+|+.+         .++     
T Consensus        44 ~~i~lEIG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl~TA~~n--~~~~~~V~tdl~~---------~l~-----  107 (209)
T KOG3191|consen   44 PEICLEIGCGSGVVSTFLASVIGPQALYLATDINPEALEATLETARCN--RVHIDVVRTDLLS---------GLR-----  107 (209)
T ss_pred             ceeEEEecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhc--CCccceeehhHHh---------hhc-----
Confidence            367888999999887777766666677888999998888776655433  5678888888854         222     


Q ss_pred             cCCCCCccEEEeccccc-cCCCCCCHHhHHHhhh
Q 017580          143 SDMHSSIQLLINNAGIL-ATSSRLTPEGYDQMMS  175 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~-~~~~~~~~~~~~~~~~  175 (369)
                         .+.+|+|+.|.++. .+..+...+.++..+.
T Consensus       108 ---~~~VDvLvfNPPYVpt~~~~i~~~~i~~a~a  138 (209)
T KOG3191|consen  108 ---NESVDVLVFNPPYVPTSDEEIGDEGIASAWA  138 (209)
T ss_pred             ---cCCccEEEECCCcCcCCcccchhHHHHHHHh
Confidence               26799999999876 3333444455555554

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=94.20  E-value=0.27  Score=45.63  Aligned_cols=41  Identities=29%  Similarity=0.390  Sum_probs=35.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      +.+++|.|+++++|.+++......|++|+++++++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL  187 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            46899999999999999998888899999999988765544

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=94.20  E-value=0.38  Score=43.75  Aligned_cols=106  Identities=13%  Similarity=0.077  Sum_probs=69.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +|+|++|.||+|..|.-+-.--.-.|++||..+-+.++..-+..++    +-..    ..|--++.++.+++.+.     
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~----G~d~----afNYK~e~~~~~aL~r~-----  219 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKF----GFDD----AFNYKEESDLSAALKRC-----  219 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhcc----CCcc----ceeccCccCHHHHHHHh-----
Confidence            5799999999999997544444446999999998887765544443    1111    23333444444444442     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                         -...||+.+-|.|--                        +..+++..|+.   .|||+..+-++.+
T Consensus       220 ---~P~GIDiYfeNVGG~------------------------~lDavl~nM~~---~gri~~CG~ISqY  258 (343)
T KOG1196|consen  220 ---FPEGIDIYFENVGGK------------------------MLDAVLLNMNL---HGRIAVCGMISQY  258 (343)
T ss_pred             ---CCCcceEEEeccCcH------------------------HHHHHHHhhhh---ccceEeeeeehhc
Confidence               235799999999851                        22445556665   4799998877765

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.17  E-value=0.12  Score=45.64  Aligned_cols=76  Identities=12%  Similarity=0.103  Sum_probs=53.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++.|+.||=.||++|   .+++.+|+.|++|+.++-+++..+.+.....+.  +..+.+.+          ..++++.+ 
T Consensus        57 ~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~--gv~i~y~~----------~~~edl~~-  120 (243)
T COG2227          57 DLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALES--GVNIDYRQ----------ATVEDLAS-  120 (243)
T ss_pred             CCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhc--cccccchh----------hhHHHHHh-
Confidence            367999999999999   689999999999999999988887776554433  22222221          12333333 


Q ss_pred             HhccCCCCCccEEEecc
Q 017580          140 LLDSDMHSSIQLLINNA  156 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nA  156 (369)
                           ..++.|+++|.-
T Consensus       121 -----~~~~FDvV~cmE  132 (243)
T COG2227         121 -----AGGQFDVVTCME  132 (243)
T ss_pred             -----cCCCccEEEEhh
Confidence                 347899998764

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=94.17  E-value=0.069  Score=43.68  Aligned_cols=41  Identities=32%  Similarity=0.433  Sum_probs=34.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT  108 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~  108 (369)
                      |+.||+++-+|+++|..|.++|.+|++.  +.+..+.+..++.
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~   41 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP   41 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence            5789999999999999999999999998  5566666666553

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=94.17  E-value=1.8  Score=36.52  Aligned_cols=74  Identities=18%  Similarity=0.207  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++.++=.|+++|.   ++..+++.|.+|+.++.+++.++.+.+.+...  +.++.++..|+.+..              
T Consensus        19 ~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~--------------   79 (179)
T TIGR00537        19 KPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLN--NVGLDVVMTDLFKGV--------------   79 (179)
T ss_pred             CCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--CCceEEEEccccccc--------------
Confidence            35678888888764   45566677779999999999888888777644  346778888875421              


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                          .+..|+++.|.-.
T Consensus        80 ----~~~fD~Vi~n~p~   92 (179)
T TIGR00537        80 ----RGKFDVILFNPPY   92 (179)
T ss_pred             ----CCcccEEEECCCC
Confidence                1368999988654

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=94.16  E-value=0.38  Score=46.75  Aligned_cols=59  Identities=15%  Similarity=0.254  Sum_probs=45.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC------EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEE
Q 017580           66 CIVTGATSGLGAAAAYALSREGF------HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~------~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      |+|.|+ ||||.++++.|+..|.      ++.+++.+                   ..+.+.+.+.+++.+++.++..+.
T Consensus         2 VlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~~   80 (435)
T cd01490           2 VFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITALQ   80 (435)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence            678874 7999999999999998      88888752                   234555666677777888888887


Q ss_pred             ecCCC
Q 017580          121 VDLSS  125 (369)
Q Consensus       121 ~Dls~  125 (369)
                      ..+..
T Consensus        81 ~~v~~   85 (435)
T cd01490          81 NRVGP   85 (435)
T ss_pred             cccCh
Confidence            76653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.15  E-value=0.13  Score=41.07  Aligned_cols=90  Identities=23%  Similarity=0.258  Sum_probs=53.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhc---C---CCcEEEEEecCCChHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRN---K---DARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~---~---~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      -.+-|.|+ |-+|.++++.|.+.|++|..+ +|+.+..+++.+.+....   .   -.....+-+-+.| +.|.++++++
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~L   88 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQL   88 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHHH
Confidence            46889998 779999999999999998776 577666666655442210   0   1123444444555 4788888887


Q ss_pred             HHHHhccCCCCCccEEEeccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                      ...-    ...+=.++||+.|-.
T Consensus        89 a~~~----~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   89 AQYG----AWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HCC------S-TT-EEEES-SS-
T ss_pred             HHhc----cCCCCcEEEECCCCC
Confidence            7510    123346899999964

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	369
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		8e-12
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		5e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 34/198 (17%)
Query: 85  REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD 144
           R G  V++  R +        +  +R    ++E  ++DL    SV +F D +        
Sbjct: 38  RRGATVIMAVRDTR-----KGEAAARTMAGQVEVRELDLQDLSSVRRFADGV-------- 84
Query: 145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP---SRI 201
             S   +LINNAGI+A    LT +G++  + TN++G F           N  +P    R+
Sbjct: 85  --SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHF--------ALTNLLLPRLTDRV 134
Query: 202 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK 261
           V V+S  H   +  ++N E +      RS+ Y     Y  SKL  L+F+ EL R L    
Sbjct: 135 VTVSSMAH---WPGRINLEDLN----WRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAG 187
Query: 262 SRHVSVIAADPGVVKTNI 279
           S  +  +AA PG   TN+
Sbjct: 188 S-PLRALAAHPGYSHTNL 204

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/222 (21%), Positives = 83/222 (37%), Gaps = 32/222 (14%)
Query: 85  REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD 144
            EG  V++ GR S +  +    + + +   +++ FQ D S      K  D+ ++      
Sbjct: 28  EEGAKVMITGRHSDVGEKAAKSVGTPD---QIQFFQHDSSDEDGWTKLFDATEKAF---- 80
Query: 145 MHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPSRIV 202
               +  L+NNAGI    S    T   + ++++ N  G FF          N  + + I+
Sbjct: 81  --GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASII 138
Query: 203 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS 262
           N++S             E   G         P    Y  SK  + I S     +  L K 
Sbjct: 139 NMSSI------------EGFVGD--------PSLGAYNASKGAVRIMSKSAALDCAL-KD 177
Query: 263 RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 304
             V V    PG +KT ++ ++P     M+      +G +  P
Sbjct: 178 YDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEP 219

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	369
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-60
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-49
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-36
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-36
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-29
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-28
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-28
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-28
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-28
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	5e-28
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-27
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-27
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-27
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-27
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-27
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-27
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-27
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	5e-27
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-26
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-26
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-26
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-26
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-26
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-26
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-26
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	7e-26
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-25
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-25
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-25
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-25
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	7e-25
3imf_A	257	Short chain dehydrogenase; structural genomics, in	7e-25
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-25
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-24
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-24
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-24
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-24
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-24
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-24
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-24
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-24
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	4e-24
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	5e-24
1xq1_A	266	Putative tropinone reducatse; structural genomics,	5e-24
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	5e-24
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-23
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-23
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-23
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-23
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-23
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-23
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-23
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-23
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	5e-23
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-23
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	6e-23
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	7e-23
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	9e-23
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	9e-23
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-22
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-22
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-22
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-22
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-22
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-22
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-22
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	3e-22
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-22
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-22
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	4e-22
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	4e-22
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	5e-22
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-22
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-22
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	6e-22
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	6e-22
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	9e-22
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-21
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-21
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-21
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-21
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-21
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-21
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-21
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-21
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-21
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-21
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-21
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	3e-21
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-21
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-21
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	4e-21
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-21
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-21
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-21
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-21
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-21
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	6e-21
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	9e-21
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	9e-21
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-20
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-20
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-20
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-20
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-20
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-20
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-20
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-20
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-20
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-20
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-20
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-20
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-20
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	4e-20
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-20
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	7e-20
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	8e-20
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-19
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-19
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-19
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-19
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-19
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-19
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	4e-19
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	6e-19
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	6e-19
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	8e-19
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	9e-19
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-18
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-18
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-18
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-18
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-18
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-18
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-18
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-18
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-18
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-18
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-18
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-18
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-18
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-18
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-18
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-18
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-18
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-18
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	4e-18
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	5e-18
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	9e-18
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-17
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-17
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-17
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-17
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-17
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-17
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-17
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-17
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-17
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-17
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-17
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-17
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	4e-17
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-17
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	5e-17
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	7e-17
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	7e-17
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-16
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-16
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-16
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-16
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-16
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	7e-16
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-15
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-15
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-15
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-15
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-15
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-15
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-14
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-14
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-14
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	4e-12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-07
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	4e-11
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	5e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  195 bits (498), Expect = 2e-60
 Identities = 84/306 (27%), Positives = 128/306 (41%), Gaps = 36/306 (11%)

Query: 55  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 114
           +P          ++TGA SGLGA  A  L+R G  V++  R +         +       
Sbjct: 11  LPSFAQ---RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AG 62

Query: 115 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 174
           ++E  ++DL    SV +F D +          S   +LINNAGI+A    LT +G++  +
Sbjct: 63  QVEVRELDLQDLSSVRRFADGV----------SGADVLINNAGIMAVPYALTVDGFESQI 112

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 234
            TN++G F LT LLLP L       R+V V+S  H      ++N E +      RS+ Y 
Sbjct: 113 GTNHLGHFALTNLLLPRLT-----DRVVTVSSMAHW---PGRINLEDLN----WRSRRYS 160

Query: 235 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV 294
               Y  SKL  L+F+ EL R L       +  +AA PG   TN+       L     + 
Sbjct: 161 PWLAYSQSKLANLLFTSELQRRLT-AAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSA 219

Query: 295 LKLLGLLQSPEKGINSVLDAALAPPETSGVY----FFGGKGRTVNSSALSFNSKLAGELW 350
              + +    + G    L AA               + G+ + V  S  + ++ +A  LW
Sbjct: 220 ATRV-VATDADFGARQTLYAASQDLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALW 278

Query: 351 TTSCNL 356
             S  L
Sbjct: 279 ALSEQL 284

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  167 bits (424), Expect = 1e-49
 Identities = 67/290 (23%), Positives = 109/290 (37%), Gaps = 55/290 (18%)

Query: 65  VCIVTGATSGLGAAAAYAL-SREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTG   G+G A    L       VVL  R        +  + +     R    Q+D+
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF--HQLDI 63

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTP--EGYDQMMSTNYIGA 181
              QS+   +D L++       +  + +L+NNAGI    +  TP     +  M TN+ G 
Sbjct: 64  DDLQSIRALRDFLRKE------YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGT 117

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-------AQVNNETITG---------- 224
             +   LLPL+K      R+VNV+S                +  +ETIT           
Sbjct: 118 RDVCTELLPLIKPQG---RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174

Query: 225 ----KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNI 279
               K  +  K    +  Y  +K+ + + S    R L    K   + + A  PG V+T++
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

Query: 280 MREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPET---SGVYF 326
                +                +SPE+G  + +  AL PP+     G + 
Sbjct: 235 AGPKAT----------------KSPEEGAETPVYLALLPPDAEGPHGQFV 268

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  132 bits (334), Expect = 1e-36
 Identities = 51/274 (18%), Positives = 95/274 (34%), Gaps = 40/274 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
           VC++TGA+ G G A A  L+R    G  +++  RS  +L +   ++ ++  D ++     
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR-----LTPEGYDQMMST 176
           DL +   V +   ++++      +   +  LINNA  L   S+           +   + 
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLL--LINNAATLGDVSKGFLNVNDLAEVNNYWAL 125

Query: 177 NYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 235
           N      LT   L   ++SP +   +VN++S      +                   Y C
Sbjct: 126 NLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGL--------------Y-C 170

Query: 236 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FLSLMA 291
           A      K    +      + L  +    V V++  PG +  ++ +              
Sbjct: 171 A-----GKAARDMLY----QVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSK 220

Query: 292 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVY 325
              LK  G L         +L         SG +
Sbjct: 221 LQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAH 254

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  133 bits (336), Expect = 2e-36
 Identities = 70/335 (20%), Positives = 115/335 (34%), Gaps = 92/335 (27%)

Query: 56  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR 115
            P T  KR   +VTG   G+G      LS  G  VVL  R      E +  + + N +  
Sbjct: 5   CPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-N 63

Query: 116 LEAFQVDLSS-FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS------------ 162
           +   Q+D++    ++    D ++           + +L+NNAG+   S            
Sbjct: 64  VVFHQLDVTDPIATMSSLADFIKT------HFGKLDILVNNAGVAGFSVDADRFKAMISD 117

Query: 163 --------------------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 202
                                  T E  ++ +  NY G   +T++L+PLL+ S    RIV
Sbjct: 118 IGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIV 176

Query: 203 NVTSFTHRNVFNAQVNNETITGKFF-------------------------LRSKCYPCAR 237
           NV+S T        V+NET                               + +  +P   
Sbjct: 177 NVSSSTGSL---KYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFG 233

Query: 238 I-YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK 296
             Y  SK CL  ++  L   +         V    PG+VKT +   + +           
Sbjct: 234 AAYTTSKACLNAYTRVLANKI-----PKFQVNCVCPGLVKTEMNYGIGN----------- 277

Query: 297 LLGLLQSPEKGINSVLDAALAPPE-TSGVYFFGGK 330
                 + E+G   V+  AL P +  SG ++   +
Sbjct: 278 -----YTAEEGAEHVVRIALFPDDGPSGFFYDCSE 307

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  113 bits (286), Expect = 2e-29
 Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 32/223 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             IVTGA+ G+G   AY L++ G HVV+  RS   L + ++        A        + 
Sbjct: 30  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTME 88

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
                 +F     +          + +LI N     + +          + M  N++   
Sbjct: 89  DMTFAEQFVAQAGKL------MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYV 142

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            LT   LP+LK S     IV V+S               + GK        P    Y  S
Sbjct: 143 VLTVAALPMLKQS--NGSIVVVSS---------------LAGKVAY-----PMVAAYSAS 180

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
           K  L  F   + +   + +  +VS+     G++ T    +  S
Sbjct: 181 KFALDGFFSSIRKEYSVSRV-NVSITLCVLGLIDTETAMKAVS 222

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  110 bits (277), Expect = 1e-28
 Identities = 47/261 (18%), Positives = 81/261 (31%), Gaps = 48/261 (18%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +     IVTGA SGLG A    L   G  V ++GR    L +    +        +    
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIV 55

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNY 178
            DL+  + V     +  +W          +L+++ AG          T E   ++M +N 
Sbjct: 56  ADLAHHEDVDVAFAAAVEW------GGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNL 109

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
           +    + +  + L+        + NV S   +     +                Y CA  
Sbjct: 110 VSTILVAQQTVRLIGER--GGVLANVLSSAAQVGKANESL--------------Y-CA-- 150

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL 298
              SK  +  F   L   L   K   + ++   P  +++                     
Sbjct: 151 ---SKWGMRGFLESLRAEL---KDSPLRLVNLYPSGIRSEFWDNTDHVDP---------- 194

Query: 299 GLLQSPEKGINSVLDAALAPP 319
               +PE     +LDA  A  
Sbjct: 195 SGFMTPEDAAAYMLDALEARS 215

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  110 bits (277), Expect = 2e-28
 Identities = 50/255 (19%), Positives = 83/255 (32%), Gaps = 53/255 (20%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVG--RSSHLLSETMADITSRNKDARLEAFQVD 122
           V +VTG + G+G +    L       V+ G  RS   L +            R      D
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGD 58

Query: 123 LSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNY 178
           ++    + +    +++           I  L+ NAG+L        +    + ++   N+
Sbjct: 59  ITEDSVLKQLVNAAVKGH-------GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINF 111

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
                L  + LP LK +     +V V+S      F++                 Y  +  
Sbjct: 112 FSIVSLVGIALPELKKT--NGNVVFVSSDACNMYFSSWGA--------------Y-GS-- 152

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--------SFLSLM 290
              SK  L  F+  L       + R V  IA  PG+V T++   +         S   L 
Sbjct: 153 ---SKAALNHFAMTLAN-----EERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLK 204

Query: 291 AFTVLKLLGLLQSPE 305
            F  LK    L    
Sbjct: 205 MFRGLKENNQLLDSS 219

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  109 bits (275), Expect = 4e-28
 Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 36/228 (15%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAF 119
            ++ + I+TGA+ G+GA  A  L+ +G+ VVL+ RS   L +   +I   NK        
Sbjct: 5   KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRLTPEGYDQMMSTNY 178
            +D++           +         + ++ +L+N A + +  S     + + ++M  N 
Sbjct: 65  PLDITDCTKADTEIKDIH------QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINV 118

Query: 179 IGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 236
           I  + + K +  ++K   +     I NV S                  K       +   
Sbjct: 119 IAQYGILKTVTEIMKVQKN---GYIFNVAS---------------RAAK-----YGFADG 155

Query: 237 RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
            IY  +K  LL  +  L+R L       + V    PG V T++ ++  
Sbjct: 156 GIYGSTKFALLGLAESLYRELA---PLGIRVTTLCPGWVNTDMAKKAG 200

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  108 bits (273), Expect = 4e-28
 Identities = 44/218 (20%), Positives = 74/218 (33%), Gaps = 41/218 (18%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
            + ++TGA+SGLGA  A     EG    L GRS   LS     ++       +     DL
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS-----NNVGYRARDL 56

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
           +S Q V +  + L          S    ++++AG           PE    ++  N   A
Sbjct: 57  ASHQEVEQLFEQL---------DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSA 107

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
             + + L+   K+   P  +V + S                  +     +       Y  
Sbjct: 108 INVLRELVKRYKDQ--PVNVVMIMS---------------TAAQ-----QPKAQESTYCA 145

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 279
            K  +      +   L   K + + +IA  PG + T  
Sbjct: 146 VKWAVKGLIESVRLEL---KGKPMKIIAVYPGGMATEF 180

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  109 bits (275), Expect = 5e-28
 Identities = 58/297 (19%), Positives = 96/297 (32%), Gaps = 55/297 (18%)

Query: 24  ALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYAL 83
                 S   +   L FQ   P++             +   + ++TGA  G+G   AY  
Sbjct: 5   HHHHHSSGREN---LYFQGHMPKRRKS----------VTGEIVLITGAGHGIGRLTAYEF 51

Query: 84  SREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS 143
           ++    +VL   + H L ET A             F VD S+ + +      ++      
Sbjct: 52  AKLKSKLVLWDINKHGLEETAAKCKGLGAKVH--TFVVDCSNREDIYSSAKKVKAE---- 105

Query: 144 DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI 201
                + +L+NNAG++ TS          ++    N +  F+ TK  LP +  +     I
Sbjct: 106 --IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHI 162

Query: 202 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK 261
           V V S                 G   +     P    Y  SK   + F   L   L   +
Sbjct: 163 VTVAS---------------AAGHVSV-----PFLLAYCSSKFAAVGFHKTLTDELAALQ 202

Query: 262 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 318
              V      P  V T  ++   + L          L     PE+ +N ++   L  
Sbjct: 203 ITGVKTTCLCPNFVNTGFIKNPSTSL-------GPTL----EPEEVVNRLMHGILTE 248

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  109 bits (274), Expect = 1e-27
 Identities = 49/228 (21%), Positives = 89/228 (39%), Gaps = 41/228 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR-NKDARLEAFQVDL 123
           V I+TG+++G+G A A   +REG  V + GR +  L ET   I +    +  + +   D+
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 67

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL------ATSSRLTPEGYDQMMST 176
           ++     +    +L ++         + +L+NNAG         T +  + E YD  ++ 
Sbjct: 68  TTDAGQDEILSTTLGKF-------GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNL 120

Query: 177 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 236
           N      LTK  +P L ++     IVN++S                              
Sbjct: 121 NLRSVIALTKKAVPHLSST--KGEIVNISSIASGLHATPDFPY----------------- 161

Query: 237 RIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMREV 283
             Y  +K  +  ++    RN  +D     + V +  PG+V T     +
Sbjct: 162 --YSIAKAAIDQYT----RNTAIDLIQHGIRVNSISPGLVATGFGSAM 203

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  108 bits (273), Expect = 1e-27
 Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 28/218 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +VTGA+ G+GAA A AL ++G  VV   R+   + E  A+  S      L  ++ DLS
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
           + + +L    +++        HS + + INNAG+    +    +  G+  M + N +   
Sbjct: 94  NEEDILSMFSAIR------SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALS 147

Query: 183 FLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
             T+     +K   V    I+N+ S +   V                          Y  
Sbjct: 148 ICTREAYQSMKERNVDDGHIININSMSGHRVLP------------------LSVTHFYSA 189

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 279
           +K  +   +  L + L   ++ H+      PGVV+T  
Sbjct: 190 TKYAVTALTEGLRQELREAQT-HIRATCISPGVVETQF 226

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  109 bits (274), Expect = 2e-27
 Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 36/226 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
              VTG  +G+G      L  +G  V +       + + +A + +      +   Q+D++
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA 69

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
           S +      D ++           + +L NNAG+         + + +D ++  N  G  
Sbjct: 70  SREGFKMAADEVEAR------FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV 123

Query: 183 FLTKLLLPLLKNSPVPS-----RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
                 +P +             +VN  S               +               
Sbjct: 124 NGVTTFVPRMVERVKAGEQKGGHVVNTAS---------------MAAFL-----AAGSPG 163

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
           IY  +K  +   S  LH +L   +   VSV+   PG+VK+ I    
Sbjct: 164 IYNTTKFAVRGLSESLHYSLLKYEIG-VSVLC--PGLVKSYIYASD 206

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  107 bits (269), Expect = 3e-27
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 15/149 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 123
           V +VTGA  G+GAAAA A +  G  VVL+GR+   L+E    I S  +    + A  ++ 
Sbjct: 16  VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN 75

Query: 124 SSFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNY 178
           ++ Q   +    ++     LD         L++NA I+   + L     E + Q+M  N 
Sbjct: 76  ATAQQYRELAARVEHEFGRLD--------GLLHNASIIGPRTPLEQLPDEDFMQVMHVNV 127

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSF 207
              F LT+ LLPLLK S   S I   +S 
Sbjct: 128 NATFMLTRALLPLLKRSEDAS-IAFTSSS 155

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  107 bits (270), Expect = 3e-27
 Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 41/238 (17%)

Query: 50  PYKRCVPPITGIKRP------VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET 103
                    +G+            +TGATSG G A A   +  G+ +VL GR    L   
Sbjct: 2   SSHHHHHHSSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQAL 61

Query: 104 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LA 160
             +++      R+    +D+    ++    D+L       +  ++++ LINNAG+     
Sbjct: 62  AGELS---AKTRVLPLTLDVRDRAAMSAAVDNLP------EEFATLRGLINNAGLALGTD 112

Query: 161 TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE 220
            +     + +D M+ TN  G  + T+LLLP L      + IVN+ S              
Sbjct: 113 PAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS-------------- 158

Query: 221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN 278
            + GK       YP + +Y  +K  +  FS  L  +L       V V   +PG+ ++ 
Sbjct: 159 -VAGK-----WPYPGSHVYGGTKAFVEQFSLNLRCDLQ---GTGVRVTNLEPGLCESE 207

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  106 bits (268), Expect = 4e-27
 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDL 123
           + +VTGA+ G+G  AA   +R G  V+L+GR+   L +  + I     +  +     +  
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73

Query: 124 SSFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNY 178
            + ++  +    +      LD         +++NAG+L     +    P+ +  +M  N 
Sbjct: 74  CTSENCQQLAQRIAVNYPRLD--------GVLHNAGLLGDVCPMSEQNPQVWQDVMQVNV 125

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSF 207
              F LT+ LLPLL  S   S +V  +S 
Sbjct: 126 NATFMLTQALLPLLLKSDAGS-LVFTSSS 153

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  107 bits (270), Expect = 4e-27
 Identities = 47/225 (20%), Positives = 80/225 (35%), Gaps = 37/225 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 123
             I+TG+++G+G +AA   ++EG  V + GR+   L ET   I      A ++ A   D+
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 87

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNY 178
           +           +L ++         I +L+NNAG              E Y +    N+
Sbjct: 88  TEASGQDDIINTTLAKF-------GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNF 140

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
                +T+     L  +     IVNV+S       ++                       
Sbjct: 141 QAVIEMTQKTKEHLIKT--KGEIVNVSSIVAGPQAHSGYPY------------------- 179

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
           Y  +K  L  ++     +L       V V +  PG V T  M  +
Sbjct: 180 YACAKAALDQYTRCTAIDLI---QHGVRVNSVSPGAVATGFMGAM 221

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  106 bits (267), Expect = 5e-27
 Identities = 42/253 (16%), Positives = 73/253 (28%), Gaps = 48/253 (18%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
            +     V GA   +GA  A   + EGF V    R+   L+  +A+I +        A  
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIV--ARS 62

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 178
           +D  +   V  F ++          H+ +++ I N G          T   + ++     
Sbjct: 63  LDARNEDEVTAFLNAADA-------HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMAC 115

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS------FTHRNVFNAQVNNETITGKFFLRSKC 232
              F   +    L+       +I    +       +    F +         KF LR+  
Sbjct: 116 WAGFVSGRESARLMLAH-GQGKIFFTGATASLRGGSGFAAFAS--------AKFGLRA-- 164

Query: 233 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF 292
                            +  + R L         +I      V T  +RE      +   
Sbjct: 165 ----------------VAQSMARELMPKNIHVAHLII--DSGVDTAWVRERRE--QMFGK 204

Query: 293 TVLKLLGLLQSPE 305
             L    LL  P 
Sbjct: 205 DALANPDLLMPPA 217

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  105 bits (264), Expect = 2e-26
 Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 16/156 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             IV G T G+G A    L   G  V+L GR+   ++    +        R+ A + D++
Sbjct: 10  KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIA 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
               +     +            +I LL  NAG+  L    +++   YD+  + N  GAF
Sbjct: 65  DLNEIAVLGAAAG------QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAF 118

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 218
           F  + L PL++       IV  +S            
Sbjct: 119 FTVQRLTPLIREG---GSIVFTSSVADEGGHPGMSV 151

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  104 bits (263), Expect = 2e-26
 Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 8/157 (5%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTGA+ G+G A A  L+ +G  V +  G       ET+ +I S    A   +   +L
Sbjct: 9   VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSA--FSIGANL 66

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
            S   V     SL   L +    +   +LINNAGI   +     T + +D+M+S N    
Sbjct: 67  ESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAP 126

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 218
           FF+ +  L  L+++   SRI+N++S   R      + 
Sbjct: 127 FFIIQQALSRLRDN---SRIINISSAATRISLPDFIA 160

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  104 bits (261), Expect = 2e-26
 Identities = 45/217 (20%), Positives = 83/217 (38%), Gaps = 36/217 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA+ G+G A A AL+R+G+ + L  RS   L +   ++        +    +D+S
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVS 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAF 182
             +SV +F   +       +    + +++ NAG+        L+ E + +M+  N +G +
Sbjct: 63  KAESVEEFSKKVL------ERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVW 116

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
              K  L  LK +     +V  +  + R +        T   K+  R+            
Sbjct: 117 RTLKAFLDSLKRTGG-LALVTTSDVSARLIPYGGGYVST---KWAARA------------ 160

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 279
                     L R   ++    V      PG V T  
Sbjct: 161 ----------LVRTFQIENP-DVRFFELRPGAVDTYF 186

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  105 bits (264), Expect = 2e-26
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 123
             I+TG+++G+G   A   ++EG +V + GRSS  L ET   I        ++ +   D+
Sbjct: 8   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 67

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMMST 176
           ++     +    +L+Q+         I +L+NNAG         T +    + Y + +  
Sbjct: 68  TTEDGQDQIINSTLKQF-------GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120

Query: 177 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH 209
           N      +TK + P L  S     IVNV+S   
Sbjct: 121 NLQAVIEMTKKVKPHLVAS--KGEIVNVSSIVA 151

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  104 bits (262), Expect = 3e-26
 Identities = 46/255 (18%), Positives = 85/255 (33%), Gaps = 47/255 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           VC+VTGA+ G+G   A  L + G  V + GR    L     +  S            D S
Sbjct: 7   VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQC--VPVVCDSS 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS---------RLTPEGYDQMMS 175
               V    + + +     +    + +L+NNA     +                +D + +
Sbjct: 65  QESEVRSLFEQVDR-----EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119

Query: 176 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT-HRNVFNAQVNNETITGKFFLRSKCYP 234
               G +F +     L+  +     IV ++S    + +FN                    
Sbjct: 120 VGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYMFNV------------------- 159

Query: 235 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV 294
               Y   K      + +    L       VS ++  PG+V+T +++E  +   ++   V
Sbjct: 160 ---PYGVGKAACDKLAADCAHELR---RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPV 213

Query: 295 LK----LLGLLQSPE 305
           LK         ++ E
Sbjct: 214 LKQFKSAFSSAETTE 228

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  104 bits (261), Expect = 4e-26
 Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 10/149 (6%)

Query: 60  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 119
           GI+  + +VT  +SGLG A+A  L+R G  ++L  R+   L    + I S    A+++  
Sbjct: 4   GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTN 177
             D+     + +  +  +             +L+ + G         L  E +D+     
Sbjct: 64  AGDIREPGDIDRLFEKARDL-------GGADILVYSTGGPRPGRFMELGVEDWDESYRLL 116

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
              A ++ +     +       R+V + S
Sbjct: 117 ARSAVWVGRRAAEQMVEKGWG-RMVYIGS 144

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  104 bits (261), Expect = 4e-26
 Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 11/145 (7%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG +SG+G A    L   G  V    R    L    + +  R   ARL A   D+ 
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL 69

Query: 125 SFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
               V  F +   +             +L+NNAG   ++T +  T E + + +   +   
Sbjct: 70  DALQVRAFAEACERTL-------GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSV 122

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
               +  LP L++      IV V S
Sbjct: 123 IHPVRAFLPQLESRADA-AIVCVNS 146

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  104 bits (261), Expect = 7e-26
 Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSHLLSETMADITSRNKDARLE 117
           + +   ++TGA++G+G A A            ++L  R    L E    I     +A++ 
Sbjct: 31  LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90

Query: 118 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMM 174
             Q+D++  + +  F ++L            I +L+NNAG         ++  E    + 
Sbjct: 91  VAQLDITQAEKIKPFIENL------PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVF 144

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 234
            TN      +T+ +LP+ +       IVN+ S               I G+       YP
Sbjct: 145 DTNVTALINITQAVLPIFQAKNS-GDIVNLGS---------------IAGR-----DAYP 183

Query: 235 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN 278
              IY  SK  +  F+  L + L    +  + VI   PG+V+T 
Sbjct: 184 TGSIYCASKFAVGAFTDSLRKEL---INTKIRVILIAPGLVETE 224

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  103 bits (258), Expect = 1e-25
 Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 42/226 (18%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +K+ + +VTGAT G+G      LSR+   V  +GR+   L+              +E  +
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIE-------GVEPIE 54

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNY 178
            D+          D L+           +  L++ A +    T    +   +   +  N 
Sbjct: 55  SDIVKEVLEEGGVDKLKNL-------DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNV 107

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
           I    L++ LLP L+ +     ++ + S                          Y  A  
Sbjct: 108 IVPAELSRQLLPALRAA--SGCVIYINSGAGNGPHPGNTI--------------Y-AA-- 148

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
              SK  L   +    +      +  + V    PG   T +++ + 
Sbjct: 149 ---SKHALRGLADAFRKEEA---NNGIRVSTVSPGPTNTPMLQGLM 188

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  103 bits (259), Expect = 1e-25
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +VTG  +G+G   A ALS EG+ VV+ GR   +L     +I  R     + A   D+ 
Sbjct: 35  IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVG 93

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 180
               V   F     ++       + + LL+NNAG          +T E ++ +++ N  G
Sbjct: 94  DPDQVAALFAAVRAEF-------ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTG 146

Query: 181 AFFLTKLLLPL-LKNSPVPSRIVNVTS 206
           AF  T+    +    +P   RI+N  S
Sbjct: 147 AFLCTQHAFRMMKAQTPRGGRIINNGS 173

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  103 bits (258), Expect = 2e-25
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 19/179 (10%)

Query: 33  TSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVL 92
           + H       L PR S+     + P   +   + +VTG + G+G   A  L   G  V +
Sbjct: 4   SHHHHHHSSGLVPRGSH-----MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFI 58

Query: 93  VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 152
             R +   ++T   +   +     +A   DLSS     +   +L       ++ + + +L
Sbjct: 59  CARDAEACADTATRL---SAYGDCQAIPADLSSEAGARRLAQAL------GELSARLDIL 109

Query: 153 INNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV---PSRIVNVTS 206
           +NNAG    A        G++++M  N    F   + LLPLL+ S     P+R++N+ S
Sbjct: 110 VNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGS 168

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  102 bits (256), Expect = 3e-25
 Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 36/220 (16%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +   V ++TGA+ G+G   A  L   G  ++L  R    +     +I      A   A  
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTA--LAQV 59

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNY 178
           +D++   SV  F  +        D    I +L+NNAG++  S  + +  + +++M+  N 
Sbjct: 60  LDVTDRHSVAAFAQAAV------DTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNI 113

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
            G  +    +LP+++       I+N+ S               I           P A +
Sbjct: 114 KGVLWGIGAVLPIMEAQRSGQ-IINIGS---------------IGAL-----SVVPTAAV 152

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN 278
           Y  +K  +   S      L  + + ++ V   +PGVV++ 
Sbjct: 153 YCATKFAVRAIS----DGLRQEST-NIRVTCVNPGVVESE 187

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  101 bits (253), Expect = 7e-25
 Identities = 50/224 (22%), Positives = 78/224 (34%), Gaps = 37/224 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+ G+GAA A  L   G  VVL  R    L     +I +   +A   +   DLS
Sbjct: 31  VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAE--SHACDLS 88

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIGA 181
              ++  F   +         H    +L+NNAG+         + P  +D +++ N    
Sbjct: 89  HSDAIAAFATGVL------AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAP 142

Query: 182 FFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
           + L +   P ++        I+N++S   +N                     Y  A    
Sbjct: 143 YLLLRAFAPAMIAAK--RGHIINISSLAGKNPVADGAA--------------Y-TA---- 181

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
            SK  L          L       V V    PG V+T     + 
Sbjct: 182 -SKWGLNGLMTSAAEELR---QHQVRVSLVAPGSVRTEFGVGLS 221

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  100 bits (252), Expect = 7e-25
 Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 12/145 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TG +SG+G   A   ++EG  VV+ GR+   L E   +I            Q+D+ 
Sbjct: 8   VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQI--LTVQMDVR 65

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
           +   + K  +   +++         I +LINNA    +  +  L+  G++ +++    G 
Sbjct: 66  NTDDIQKMIEQIDEKF-------GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGT 118

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           F+ ++ +        +   I+N+ +
Sbjct: 119 FYCSQAIGKYWIEKGIKGNIINMVA 143

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  100 bits (251), Expect = 8e-25
 Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 42/246 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             I   A  G+G   +  L +      ++          +A++ + N    +     D++
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINPKVNITFHTYDVT 65

Query: 125 SFQSVLK--FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAF 182
              +  K   K    Q         ++ +LIN AGI      L     ++ ++ N+ G  
Sbjct: 66  VPVAESKKLLKKIFDQL-------KTVDILINGAGI------LDDHQIERTIAINFTGLV 112

Query: 183 FLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
             T  +L     +       I N+ S               +TG             +Y 
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICS---------------VTGF-----NAIHQVPVYS 152

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-LG 299
            SK  ++ F+  L +         V+  + +PG+ +T ++    S+L +       L   
Sbjct: 153 ASKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSH 209

Query: 300 LLQSPE 305
             Q+ E
Sbjct: 210 PTQTSE 215

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =   99 bits (250), Expect = 2e-24
 Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 9/144 (6%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TGAT G+GA  A A +  G  +VL GR    L      +  +     +    +DL+
Sbjct: 22  RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLA 80

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
              +  +            +    + +L+NNAGI          P+ +D  ++ N     
Sbjct: 81  EPDAPAELARRAA------EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPA 134

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
            L   +   +  +     I+ V S
Sbjct: 135 LLASAVGKAMVAAGEGGAIITVAS 158

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =   99 bits (250), Expect = 2e-24
 Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 12/145 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG + G+G A    L+  G  V    R+   L E +     +  +   E    DL 
Sbjct: 23  TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNV--EGSVCDLL 80

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
           S     K  +     +         + +L+NNAG++    +   T + Y+ +M TN+  A
Sbjct: 81  SRTERDKLMQTVAHVF------DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAA 134

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           + L+++  PLLK S     ++ ++S
Sbjct: 135 YHLSQIAYPLLKASQ-NGNVIFLSS 158

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =   99 bits (250), Expect = 2e-24
 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 16/146 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + ++TGATSG+G AAA     EG  V + GR   +L   +A+I            Q D +
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSA 85

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
           +   + +  + ++           I +L  NAG   +     +T E YD     N  G  
Sbjct: 86  NLAELDRLYEKVKAE------AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVL 139

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFT 208
           F  +  LPLL      S +V   S  
Sbjct: 140 FTVQKALPLLARG---SSVVLTGSTA 162

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 99.1 bits (248), Expect = 2e-24
 Identities = 50/222 (22%), Positives = 80/222 (36%), Gaps = 38/222 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TGA+ G+G A A  L  +G+ V L+ R    L    A++              D+ 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG------ALPLPGDVR 60

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
                 +   +++      +    +  L+NNAG+  +     LT E +  ++ TN  GAF
Sbjct: 61  EEGDWARAVAAME------EAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAF 114

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
              +  +P L      + IVNV S               + GK       +     Y  S
Sbjct: 115 LGIRHAVPALLRRGGGT-IVNVGS---------------LAGK-----NPFKGGAAYNAS 153

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           K  LL  +     +L     R V  +   PG V T      P
Sbjct: 154 KFGLLGLAGAAMLDLREANVR-VVNVL--PGSVDTGFAGNTP 192

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 99.5 bits (249), Expect = 2e-24
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 12/145 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG + G+G      L+  G  V    R+   L++ +    S+      EA   DLS
Sbjct: 11  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV--EASVCDLS 68

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
           S     +        +      H  + +L+NNAGI+    +   T E Y  +MS N+  A
Sbjct: 69  SRSERQELMNTVANHF------HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAA 122

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           + L+ L  P LK S     +V ++S
Sbjct: 123 YHLSVLAHPFLKAS-ERGNVVFISS 146

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 98.8 bits (247), Expect = 3e-24
 Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 40/217 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +VTGAT+G G        ++G  V+  GR    L E   ++        L   Q+D+ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVR 56

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGA 181
           +  ++ +   SL           +I +L+NNAG+   +  + + + E ++ M+ TN  G 
Sbjct: 57  NRAAIEEMLASL------PAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGL 110

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
            ++T+ +LP +        I+N+ S                 G        Y    +Y  
Sbjct: 111 VYMTRAVLPGMVERNH-GHIINIGS---------------TAGS-----WPYAGGNVYGA 149

Query: 242 SKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKT 277
           +K  +  FS     NL  D     V V   +PG+V  
Sbjct: 150 TKAFVRQFS----LNLRTDLHGTAVRVTDIEPGLVGG 182

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 99.2 bits (248), Expect = 3e-24
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 17/147 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + IVTGA SG+G A A AL+  G+ V L GR    L ET A+I              D++
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVT 84

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 180
              SV   F  +++++         + +L NNAG  A +     LT   + Q++ TN  G
Sbjct: 85  DPDSVRALFTATVEKF-------GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTG 137

Query: 181 AFFLTKLLLPLLKNSPVPS-RIVNVTS 206
            F  T+    ++K       RI+N  S
Sbjct: 138 PFLCTQEAFRVMKAQEPRGGRIINNGS 164

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 99.7 bits (249), Expect = 4e-24
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 33/222 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG  SG+G A A   +R G  +VL       L + +  +  +  DA       D+ 
Sbjct: 33  AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAH--GVVCDVR 90

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
               +++  D   +          + ++ +NAGI+      ++  + +  ++  +  G+ 
Sbjct: 91  HLDEMVRLADEAFRL------LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSI 144

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
              +  LP L        I    S                 G              Y  +
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTAS---------------FAGLV-----PNAGLGTYGVA 184

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           K  ++  +  L R +  +    VSV+   P VV+T ++    
Sbjct: 185 KYGVVGLAETLAREVKPNGIG-VSVLC--PMVVETKLVSNSE 223

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 98.6 bits (246), Expect = 4e-24
 Identities = 53/280 (18%), Positives = 101/280 (36%), Gaps = 61/280 (21%)

Query: 65  VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
             +VTGA  G+G      L ++    H++   R     +E  +      KD+R+    + 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-----KDSRVHVLPLT 59

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYI 179
           ++  +S+  F   + + +        + LLINNAG+L    T++        + +  N  
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSD----GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 180 GAFFLTKLLLPLLKNSPVP----------SRIVNVTSFTHRNVFNAQVNNETITGKFFLR 229
               LT+ LLPLLKN+             + ++ ++S                 G     
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS---------------GLGSITDN 160

Query: 230 SKCYPCARIYEY--SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL 287
           +       +  Y  SK  + +F   L  +L   K  +V V+   PG V+TN+  +  +  
Sbjct: 161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDL---KDDNVLVVNFCPGWVQTNLGGKNAAL- 216

Query: 288 SLMAFTVLKLLGLLQSPEKGINSVLD-AALAPPETSGVYF 326
                          + E+    ++          +G +F
Sbjct: 217 ---------------TVEQSTAELISSFNKLDNSHNGRFF 241

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 98.4 bits (246), Expect = 5e-24
 Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 44/237 (18%)

Query: 59  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 118
           + ++  V ++TGA+SG+G A A AL+ EG  V +  R    L     ++T+         
Sbjct: 3   SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKV--HV 60

Query: 119 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMST 176
            ++D++  Q V     S        +    + +L+NNAGI  L          + +M+ T
Sbjct: 61  LELDVADRQGVDAAVASTV------EALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDT 114

Query: 177 NYIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 235
           N +G  ++T+  LP LL++      +V ++S               I G+          
Sbjct: 115 NLLGLMYMTRAALPHLLRSK---GTVVQMSS---------------IAGR-----VNVRN 151

Query: 236 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF 292
           A +Y+ +K  +  FS  L + +     R V VI   PG   T            +  
Sbjct: 152 AAVYQATKFGVNAFSETLRQEVTERGVR-VVVIE--PGTTDTE-------LRGHITH 198

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 98.7 bits (247), Expect = 5e-24
 Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 14/146 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG T G+G A     +  G  +    R+ + L+E ++    +           D S
Sbjct: 16  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV--TGSVCDAS 73

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 180
                 K   ++      S     + +LINN G            T E +   +STN   
Sbjct: 74  LRPEREKLMQTVS-----SMFGGKLDILINNLGAIRSKPTL--DYTAEDFSFHISTNLES 126

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
           A+ L++L  PLLK S     I+ ++S
Sbjct: 127 AYHLSQLAHPLLKAS-GCGNIIFMSS 151

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 98.4 bits (246), Expect = 5e-24
 Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 15/146 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +++G    LG   A   + +G  +VL  R+   L +    +T   + A   +   D++
Sbjct: 13  VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRA--LSVGTDIT 70

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 180
               V     ++++ +         + ++INNA  + +       T E     +     G
Sbjct: 71  DDAQVAHLVDETMKAY-------GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFG 123

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
           A  L +   P L+ S     +VNV S
Sbjct: 124 ALRLIQGFTPALEES--KGAVVNVNS 147

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 97.6 bits (244), Expect = 1e-23
 Identities = 46/223 (20%), Positives = 83/223 (37%), Gaps = 35/223 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G A A  L ++GF V +   +        ++I      A   A +VD+S
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA--VAVKVDVS 61

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
               V    + + +             +++NNAG+  ++    +TPE  D++ + N  G 
Sbjct: 62  DRDQVFAAVEQARKTL-------GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGV 114

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
            +  +  +   K      +I+N  S                          Y  +     
Sbjct: 115 IWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAV--------------Y-SS----- 154

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           SK  +   +    R+L       ++V    PG+VKT +  E+ 
Sbjct: 155 SKFAVRGLTQTAARDLA---PLGITVNGYCPGIVKTPMWAEID 194

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 97.2 bits (243), Expect = 1e-23
 Identities = 43/229 (18%), Positives = 82/229 (35%), Gaps = 37/229 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV--GRSSHLLSETMADITSRNKDARLEAFQVD 122
           V +VTG   G+G   +  L+ +GF + +    +     +ET+  I + ++ A      +D
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAV--FVGLD 61

Query: 123 LSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYI 179
           ++   +      ++ ++            +L+NNAGI        +T E   Q+ S N  
Sbjct: 62  VTDKANFDSAIDEAAEKL-------GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVF 114

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
             FF  +          V  +I+N  S      F                   Y      
Sbjct: 115 SVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSA--------------Y-ST--- 156

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS 288
             +K  +   +    + L     +  +V A  PG+V T +  ++ + LS
Sbjct: 157 --TKFAVRGLTQAAAQELA---PKGHTVNAYAPGIVGTGMWEQIDAELS 200

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 96.9 bits (242), Expect = 2e-23
 Identities = 52/231 (22%), Positives = 83/231 (35%), Gaps = 45/231 (19%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFH-------VVLVGRSSHLLSETMADITSRNKDARLE 117
           + ++TGA  G+G A A   +R   H       +VL  R++  L +   +  +       +
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALT--D 61

Query: 118 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMS 175
               D+S    V +    +       + +  I  L+NNAG+      S LT E +D  M+
Sbjct: 62  TITADISDMADVRRLTTHIV------ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN 115

Query: 176 TNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 233
           TN  G FFLT+ L  L++  +S     I  +TS      F                   Y
Sbjct: 116 TNLKGTFFLTQALFALMERQHS---GHIFFITSVAATKAFRHSSI--------------Y 158

Query: 234 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
            C      SK         +          +V +    PG V T +  +V 
Sbjct: 159 -CM-----SKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMWGKVD 200

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 96.5 bits (241), Expect = 3e-23
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 18/151 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 123
             ++TG++ G+G A A   +R G  V L GR +   + ET+A + +   DA    F  DL
Sbjct: 9   RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA--FFAADL 66

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYI 179
           ++ ++  +   + + ++         I +LINNAG L        +    YD +M  N  
Sbjct: 67  ATSEACQQLVDEFVAKF-------GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIR 119

Query: 180 GAFFLTKLLLPLLKNSPVPS----RIVNVTS 206
                TK  LP L  +   S     +++  S
Sbjct: 120 SVVMTTKFALPHLAAAAKASGQTSAVISTGS 150

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 96.1 bits (240), Expect = 3e-23
 Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 24/144 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG + G+G A    L +   H V+             DI        L+  + DL+
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINI-----------DIQQSFSAENLKFIKADLT 54

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
             Q +          +LD   + S   +  NAGIL   S   +  E   +++  N   + 
Sbjct: 55  KQQDITN--------VLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSI 106

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
           +  K L   LK     + IV   S
Sbjct: 107 YFIKGLENNLKVG---ASIVFNGS 127

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 96.4 bits (241), Expect = 3e-23
 Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 123
             +V GA   +G A A   ++EG +VVL    +    +  +A+I    + A   A + DL
Sbjct: 10  TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSA--LAIKADL 67

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 179
           ++   V      +  ++         I  L++ AG L     +       + Q++  N  
Sbjct: 68  TNAAEVEAAISAAADKF-------GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV-FNAQVN 218
             F   K  LP +        IV  +S   R+      + 
Sbjct: 121 SLFLTAKTALPKMAKG---GAIVTFSSQAGRDGGGPGALA 157

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 96.6 bits (241), Expect = 4e-23
 Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 15/147 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TG+TSG+G A A  L++ G ++VL G  +     T+ D  +      +     D++
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT 86

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
               +         ++           +L+NNAG+           E +D++++ N   +
Sbjct: 87  KPSEIADMMAMVADRF-------GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSS 139

Query: 182 FFLTKLLLPLLK--NSPVPSRIVNVTS 206
           F   +  +P +K        RI+N+ S
Sbjct: 140 FHTIRGAIPPMKKKGW---GRIINIAS 163

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 96.1 bits (240), Expect = 4e-23
 Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 17/147 (11%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
                ++TGA+  +G   A  L   G  V++  R+      ++ ++    + A   A   
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTEL----RQAGAVALYG 78

Query: 122 DLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRLTPEGYDQMMSTNYI 179
           D S    ++        Q        SS++ +++NA   LA +     + + +M S + +
Sbjct: 79  DFSCETGIMAFIDLLKTQT-------SSLRAVVHNASEWLAETPGEEADNFTRMFSVHML 131

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTS 206
             + +     PLL  S   + IV+++ 
Sbjct: 132 APYLINLHCEPLLTASE-VADIVHISD 157

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 95.8 bits (239), Expect = 5e-23
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 15/147 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG+TSG+G   A AL+ +G  +VL G       E +    +     ++     DLS
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
             ++V     ++++Q          I +L+NNAGI   A       E +D +++ N    
Sbjct: 66  KGEAVRGLVDNAVRQM-------GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAV 118

Query: 182 FFLTKLLLPLLK--NSPVPSRIVNVTS 206
           F  T   LP +K        RI+N+ S
Sbjct: 119 FHGTAAALPHMKKQGF---GRIINIAS 142

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 95.2 bits (238), Expect = 5e-23
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 18/144 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA  G+G     AL   G  VV V R+   L   + +         +E   VDL 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLG 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
            +++  +   S+            + LL+NNA +  L     +T E +D+    N     
Sbjct: 63  DWEATERALGSVGP----------VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVI 112

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
            +++++   L    VP  IVNV+S
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSS 136

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 95.7 bits (239), Expect = 6e-23
 Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 14/146 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TG++SG+G A A   ++EG H+VLV R    L E    +  +    R+    VD++
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAVDVA 67

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
           + + V    +S++             +L+NNAG     T      E +        + A 
Sbjct: 68  TPEGVDAVVESVR------SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAV 121

Query: 183 FLTKLLLPLLK--NSPVPSRIVNVTS 206
            L + L+P ++         I++  S
Sbjct: 122 RLARGLVPGMRARGG---GAIIHNAS 144

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 95.7 bits (239), Expect = 7e-23
 Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 12/145 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TGA++G+G   A A +  G  V +  R S  L     +I      A     + D++
Sbjct: 34  RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKAL--PIRCDVT 91

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
               V         +          I + + NAGI++  +   +  E + ++  TN  G 
Sbjct: 92  QPDQVRGMLDQMTGEL-------GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGV 144

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           F   +     + +  +   I+   S
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTAS 169

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 95.3 bits (238), Expect = 9e-23
 Identities = 30/146 (20%), Positives = 73/146 (50%), Gaps = 13/146 (8%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 123
           V ++TG+++GLG + A   + E   VV+  RS     +  + +I     +A   A + D+
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA--IAVKGDV 66

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
           +    V+   + +++++         + ++INNAG+    +S  ++   +++++ TN  G
Sbjct: 67  TVESDVINLVQSAIKEF-------GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTG 119

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
           AF  ++  +     + +   ++N++S
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSS 145

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 95.3 bits (238), Expect = 9e-23
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQ 120
            RPV IVTG   G+G   A AL+  GF + + G      ++  +A+++           +
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVI--FLR 85

Query: 121 VDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMS 175
            DL+   S        + ++         I  L+NNAGI +        L PE +D ++ 
Sbjct: 86  ADLADLSSHQATVDAVVAEF-------GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVG 138

Query: 176 TNYIGAFFLTKLLL-PLLKNSPVPS-RIVNVTS 206
            N  G  F T+ +L  +L +    S  I+N+TS
Sbjct: 139 VNLRGTVFFTQAVLKAMLASDARASRSIINITS 171

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 94.9 bits (237), Expect = 1e-22
 Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V IVTGA+ G+GAA A  L+ +GF VV+     +    E    I +    A     Q D+
Sbjct: 29  VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKAL--TAQADV 86

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
           S   +V + F  + + +         + +L+NNAGI+  ++        +D++++ N  G
Sbjct: 87  SDPAAVRRLFATAEEAF-------GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKG 139

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 218
            F   +     L+      RI+N+++     +  +   
Sbjct: 140 TFNTLREAAQRLRVG---GRIINMSTSQVGLLHPSYGI 174

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 95.0 bits (237), Expect = 1e-22
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 16/148 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA SG+G A A AL+ +G  V  +GR+   + E   +I      A   A + D+S
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAI--ALEADVS 87

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 180
               +    +D + ++         + +++ NAGI    +    L P  +D+ ++ N  G
Sbjct: 88  DELQMRNAVRDLVLKF-------GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRG 140

Query: 181 AFFLTKLLLP-LLKNSPVPSRIVNVTSF 207
            F    L +P L +       IV V+S 
Sbjct: 141 TFLTLHLTVPYLKQRG--GGAIVVVSSI 166

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 94.3 bits (235), Expect = 1e-22
 Identities = 16/145 (11%), Positives = 38/145 (26%), Gaps = 26/145 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +V G +  LGA        + ++ + +    +                   +F +  S
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKSWNTISIDFREN--------------PNADHSFTIKDS 69

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 181
             + +    + +            +   +  AG  +  +       +    M+  N   A
Sbjct: 70  GEEEIKSVIEKIN------SKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSA 123

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           F    +   LL         V   +
Sbjct: 124 FASAHIGAKLLNQG---GLFVLTGA 145

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 94.5 bits (236), Expect = 1e-22
 Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 15/145 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             IVTG + G+GAA A AL + G  V +           +A +          A +VD++
Sbjct: 14  KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVT 68

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
              SV    + ++              LL  NAG+  +  +  +T E +D     N  G 
Sbjct: 69  KRASVDAAMQKAIDAL-------GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGV 121

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           F   ++       S     IVN  S
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTAS 146

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 94.6 bits (236), Expect = 2e-22
 Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 17/146 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG+T+G+G A A +L  EG +V++ GR    ++ET+ +I ++  DA L+    DL 
Sbjct: 12  TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
           + Q     +D ++++         + +LINN GI        +  E + ++   N +   
Sbjct: 72  TEQGC---QDVIEKY-------PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGV 121

Query: 183 FLTKLLLPLLK--NSPVPSRIVNVTS 206
            LT+  L  +         R++ + S
Sbjct: 122 RLTRSYLKKMIERKE---GRVIFIAS 144

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 94.1 bits (235), Expect = 2e-22
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 18/144 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA  G+G     AL   G  VV V R++  L     +         +E   VDL 
Sbjct: 9   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLG 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
            + +  K    +            + LL+NNA +  +     +T E +D+  S N    F
Sbjct: 63  DWDATEKALGGIGP----------VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 112

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
            +++++   + N  VP  IVNV+S
Sbjct: 113 QVSQMVARDMINRGVPGSIVNVSS 136

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 95.0 bits (237), Expect = 2e-22
 Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 9/156 (5%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V  +TG  +GLG      LS  G   V+  R   +L  T   I+S+    ++ A Q D+ 
Sbjct: 28  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVR 86

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
               V      L        +     ++INNA    ++ + RL+P  +  +      G  
Sbjct: 87  DPDMVQNTVSELI------KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTA 140

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 218
           F+T  +   L  +   +  +++T+          V 
Sbjct: 141 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP 176

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 94.2 bits (235), Expect = 3e-22
 Identities = 38/182 (20%), Positives = 63/182 (34%), Gaps = 16/182 (8%)

Query: 45  PRKSNPYKRCVPPITGIKRP------VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH 98
           P        C+P    +  P      V  +TG  SG+G   A    R G H V+  RS  
Sbjct: 3   PPPDVEGDDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLP 62

Query: 99  LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI 158
            +      +       R     +D+ +  +V+   D              I +LIN A  
Sbjct: 63  RVLTAARKLAGATG-RRCLPLSMDVRAPPAVMAAVDQAL------KEFGRIDILINCAAG 115

Query: 159 --LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ 216
             L  +  L+   +  +M  +  G F ++++L            IVN+T+         Q
Sbjct: 116 NFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQALQ 174

Query: 217 VN 218
           V+
Sbjct: 175 VH 176

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 93.8 bits (234), Expect = 3e-22
 Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 39/240 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 123
              VTG + G+GAA A  L+ EG  V L    ++      +++I      A   A + D 
Sbjct: 33  TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAV--AIRADN 90

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
              +++ +  +++++           + +L+N+AGI  ++     T   +D++M+ N+  
Sbjct: 91  RDAEAIEQAIRETVEAL-------GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRA 143

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 240
            F   +     L +     RI+ + S     V    ++                    Y 
Sbjct: 144 PFVAIRSASRHLGDG---GRIITIGSNLAELVPWPGISL-------------------YS 181

Query: 241 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVLKLLG 299
            SK  L   +  L R+LG    R ++V    PG   T++         +          G
Sbjct: 182 ASKAALAGLTKGLARDLG---PRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYG 238

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 93.3 bits (233), Expect = 3e-22
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG+  GLG A A  L+  G  V+L    + LL+E++  +T +  DA       D++
Sbjct: 11  TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA--HGVAFDVT 68

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
              ++      L            + +LINNAGI        L  E + +++ TN   AF
Sbjct: 69  DELAIEAAFSKLD------AEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAF 122

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
            +++     +       +I+N+ S
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGS 146

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 93.4 bits (233), Expect = 4e-22
 Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 18/148 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL---VGRSSHLLSETMADITSRNKDARLEAFQV 121
           V ++ G    LGA  A   + E  ++VL     + S   ++   ++  +        +Q 
Sbjct: 13  VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKV--ALYQS 70

Query: 122 DLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 178
           DLS+ + V K F  + +++         + + IN  G +        +   +D M + N 
Sbjct: 71  DLSNEEEVAKLFDFAEKEF-------GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINN 123

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
             A+F  K     +  +     I+ + +
Sbjct: 124 KVAYFFIKQAAKHMNPN---GHIITIAT 148

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 93.0 bits (232), Expect = 5e-22
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 18/149 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTG+  G+G A A AL+REG  VV+   ++         I +    A   +  VD+S
Sbjct: 11  VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAI--SVAVDVS 68

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS-----RLTPEGYDQMMSTNY 178
             +S       +L ++         I  L+NNA I           + PE Y + MS N 
Sbjct: 69  DPESAKAMADRTLAEF-------GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNL 121

Query: 179 IGAFFLTKLLLP-LLKNSPVPSRIVNVTS 206
            GA + T+ +   + K       IVN +S
Sbjct: 122 DGALWCTRAVYKKMTKRG--GGAIVNQSS 148

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 93.5 bits (233), Expect = 5e-22
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 21/163 (12%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQ 120
           + P  ++TG    +G + A  L ++GF VV+  R S       +A++ +          +
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCK 68

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-------------LATSSRLTP 167
            DLS   S+L   + +      +       +L+NNA                A  ++   
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRA--FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 126

Query: 168 EGYDQMMSTNYIGAFFLTKLLLPLLKNSPV----PSRIVNVTS 206
               ++  +N +   FL +                  +VN+  
Sbjct: 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 93.0 bits (232), Expect = 5e-22
 Identities = 50/240 (20%), Positives = 83/240 (34%), Gaps = 55/240 (22%)

Query: 59  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 118
            G  + + ++TGA+SG+G A A   S EG  ++L+ R    L                  
Sbjct: 12  RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLC 63

Query: 119 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMST 176
            QVD++   +        +       ++     ++NNAG+  L          + +M   
Sbjct: 64  AQVDVTDKYTFDTAITRAE------KIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDV 117

Query: 177 NYIGAFFLTKLLLPLLKNSPVPSR----IVNVTSFTHRNVFNAQVNNETITGKFFLRSKC 232
           N +G     + +L  +K     +R    I+N++S               I GK     K 
Sbjct: 118 NVLGLLNGMQAVLAPMK-----ARNCGTIINISS---------------IAGK-----KT 152

Query: 233 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF 292
           +P    Y  +K  +   S  +   +     R V  IA  P  VKT         LS    
Sbjct: 153 FPDHAAYCGTKFAVHAISENVREEVAASNVR-VMTIA--PSAVKTE-------LLSHTTS 202

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 93.0 bits (232), Expect = 6e-22
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 18/145 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA SG+G AA    +REG  +V V R   LL+E +A +     +A   A   D+S
Sbjct: 8   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVS 62

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
             ++V   F ++L+++         +  + + AG+   A S  L  E +++++  N  G+
Sbjct: 63  DPKAVEAVFAEALEEF-------GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGS 115

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           F + +    +L+       +V   S
Sbjct: 116 FLVARKAGEVLEEG---GSLVLTGS 137

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 92.6 bits (231), Expect = 6e-22
 Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 16/148 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA SG+G A A   +     VV V      L++ + ++    K+      + D+S
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEV--LGVKADVS 66

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 180
             + V +  + + + +       S I +L NNAGI   +   + ++ E ++++++ N   
Sbjct: 67  KKKDVEEFVRRTFETY-------SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYS 119

Query: 181 AFFLTKLLLP-LLKNSPVPSRIVNVTSF 207
           AF+ ++ ++P +LK       IVN  S 
Sbjct: 120 AFYSSRAVIPIMLKQG--KGVIVNTASI 145

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 92.7 bits (231), Expect = 9e-22
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 16/146 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V + TGA  G+G   A  L R G  VV+  G SS    E +A++          A Q D+
Sbjct: 23  VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQG--VAIQADI 80

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
           S    V+  F  ++  +         +  +++N+G+        +T E +D++ + N  G
Sbjct: 81  SKPSEVVALFDKAVSHF-------GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRG 133

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
            FF+ +  L   +      RI+  +S
Sbjct: 134 QFFVAQQGLKHCRRG---GRIILTSS 156

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 92.0 bits (229), Expect = 1e-21
 Identities = 50/282 (17%), Positives = 91/282 (32%), Gaps = 64/282 (22%)

Query: 64  PVCIVTGATSGLGAAAAYAL---SREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
              ++TG   GLG     AL    +   H+    R+     E           + +   +
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED---LAKNHSNIHILE 78

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTN 177
           +DL +F +  K    ++    D      + +L NNAGI   S+R+     +     + TN
Sbjct: 79  IDLRNFDAYDKLVADIEGVTKDQ----GLNVLFNNAGIAPKSARITAVRSQELLDTLQTN 134

Query: 178 YIGAFFLTKLLLPLLKNSPVP----------SRIVNVTSFTHRNVFNAQVNNETITGKFF 227
            +    L K  LPLLK +             + I+N++S               I G   
Sbjct: 135 TVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS---------------ILGSIQ 179

Query: 228 LRSKCYPCARIYEY--SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
             +       +Y Y  SK  L   +  L  +L     + +  ++  PG VKT++      
Sbjct: 180 GNTD----GGMYAYRTSKSALNAATKSLSVDL---YPQRIMCVSLHPGWVKTDMGGSSAP 232

Query: 286 FLSLMAFTVLKLLGLLQSPEKGINSVLD-AALAPPETSGVYF 326
                                    ++   +    + +G + 
Sbjct: 233 L----------------DVPTSTGQIVQTISKLGEKQNGGFV 258

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 14/145 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             I+TGA +G+G   A   +  G  VV+   ++   +  + +I      A   A + D++
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA--FACRCDIT 70

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL-ATSSRLTPEGYDQMMSTNYIGAF 182
           S Q +      ++ +          + +L+NNAG        +    + +    N    F
Sbjct: 71  SEQELSALADFAISKL-------GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFF 123

Query: 183 FLTKLLLPL-LKNSPVPSRIVNVTS 206
            L++L+ P   KN      I+ +TS
Sbjct: 124 HLSQLVAPEMEKNG--GGVILTITS 146

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 92.2 bits (230), Expect = 1e-21
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 16/152 (10%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQ 120
             PV +VTG + G+GAA     +R+G+ V +   ++       +A IT    +A   A  
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEA--VAIP 82

Query: 121 VDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMST 176
            D+ +   +   F    +Q+         +  L+NNAGI+    R+   + E  ++M+  
Sbjct: 83  GDVGNAADIAAMFSAVDRQF-------GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135

Query: 177 NYIGAFFLTKLLLPLL--KNSPVPSRIVNVTS 206
           N  G+       +  +    S     IVNV+S
Sbjct: 136 NVTGSILCAAEAVRRMSRLYSGQGGAIVNVSS 167

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 29/146 (19%), Positives = 61/146 (41%), Gaps = 14/146 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VT +T G+G A A  L+++G HVV+  R    +  T+A +               + 
Sbjct: 16  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSV--TGTVCHVG 73

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 180
             +   +    ++         H  + +L++NA +          T E +D+++  N   
Sbjct: 74  KAEDRERLVAMAVNL-------HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKA 126

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
              +TK ++P ++       ++ V+S
Sbjct: 127 TVLMTKAVVPEMEKRG-GGSVLIVSS 151

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 16/149 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TG  SGLG A A  L+ EG  + LV  SS  L  + A +     DA +     D+S
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 179
               V        +  + +  +    I    NNAGI    +     T   +D+++S N  
Sbjct: 75  DEAQV--------EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLR 126

Query: 180 GAFFLTKLLLP-LLKNSPVPSRIVNVTSF 207
           G F   + +L  + +       +VN  S 
Sbjct: 127 GVFLGLEKVLKIMREQG--SGMVVNTASV 153

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 91.4 bits (228), Expect = 2e-21
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 16/147 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTG    +G A   AL+  G  V++      + ++ + D+     D    +  +D++
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDV--SSVVMDVT 72

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 180
           + +SV    +   +Q          + +L+  AGI  +      +T   + + +  N  G
Sbjct: 73  NTESVQNAVRSVHEQE-------GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125

Query: 181 AFFLTKLLLP-LLKNSPVPSRIVNVTS 206
            F   + +   +L+       IV + S
Sbjct: 126 MFRSCQAVGRIMLEQK--QGVIVAIGS 150

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 91.4 bits (228), Expect = 2e-21
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 16/147 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 123
             +VTG++ G+G AAA  L+  G+++V+    S     ET  +I            + ++
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVL--VVKANV 63

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIG 180
                + + F+   + +         + + +NNA    L     L    +D  M+ N   
Sbjct: 64  GQPAKIKEMFQQIDETF-------GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKA 116

Query: 181 AFFLTKLLLP-LLKNSPVPSRIVNVTS 206
             F  +     + KN      IV+++S
Sbjct: 117 LLFCAQEAAKLMEKNG--GGHIVSISS 141

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 90.3 bits (225), Expect = 2e-21
 Identities = 44/255 (17%), Positives = 80/255 (31%), Gaps = 60/255 (23%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++TGAT GLG A A AL  +G  ++L GR +  L+E   ++          A   DL+  
Sbjct: 4   LITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREV-------GARALPADLADE 54

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFL 184
                     +  L   +    + LL++  G    A+      +  ++M++ + + A   
Sbjct: 55  LEA-------KALL---EEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA-- 102

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
              +L   +      R V   +                           P    Y  +K 
Sbjct: 103 --FVLKHARFQKGA-RAVFFGA---------------YPRYV-----QVPGFAAYAAAKG 139

Query: 245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 304
            L  +     + L       V ++      V T +   +          +        SP
Sbjct: 140 ALEAYLEAARKEL---LREGVHLVLVRLPAVATGLWAPLGGP---PKGAL--------SP 185

Query: 305 EKGINSVLDAALAPP 319
           E+    VL+     P
Sbjct: 186 EEAARKVLEGLFREP 200

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G A A AL  +G  V LV  +     +  A +  + +  +    Q D++
Sbjct: 9   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 68

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFF 183
             Q +   F+  +  +         + +L+NNAG+         + +++ +  N +    
Sbjct: 69  DQQQLRDTFRKVVDHF-------GRLDILVNNAGV------NNEKNWEKTLQINLVSVIS 115

Query: 184 LTKLLLPLLK--NSPVPSRIVNVTS 206
            T L L  +   N      I+N++S
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSS 140

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 16/155 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTG+  G+GAA A  L R G  VV+    S+    + +++I +   DA   A + D+
Sbjct: 20  VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDA--IAIKADI 77

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
                ++K F  ++  +         + + ++N+G+++      +T E +D++ S N  G
Sbjct: 78  RQVPEIVKLFDQAVAHF-------GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRG 130

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 215
            FF+ +     L       RIV  +S T ++    
Sbjct: 131 QFFVAREAYRHLTEG---GRIVLTSSNTSKDFSVP 162

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 91.5 bits (228), Expect = 3e-21
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
            V +VTGATSG+G   A  L +EG  V +  R    L  T+ ++     +A  +    D+
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA--DGRTCDV 80

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
            S   +       ++++         + +L+NNAG      ++ L  E +  ++ TN  G
Sbjct: 81  RSVPEIEALVAAVVERY-------GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 133

Query: 181 AFFLTKLLLPLL----KNSPVPSRIVNVTS 206
            F +TK +L       + +    RIVN+ S
Sbjct: 134 VFRVTKQVLKAGGMLERGT---GRIVNIAS 160

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 91.2 bits (227), Expect = 3e-21
 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 17/148 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
              VTG +SG+G A A  L+  G  V    R +  +S  +  + +   D   +    D++
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDV--DGSSCDVT 83

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
           S   V     +        +    I +L+N+AG      ++ L    +  ++ TN  G F
Sbjct: 84  STDEVHAAVAAAV------ERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVF 137

Query: 183 FLTKLLLPLL----KNSPVPSRIVNVTS 206
            +T+ +L              RIVN+ S
Sbjct: 138 RVTREVLRAGGMREAGW---GRIVNIAS 162

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 90.7 bits (226), Expect = 3e-21
 Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 24/146 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA+ G+GA    A     + VV   RS              + D  +     D+S
Sbjct: 30  VVVITGASQGIGAGLVRAYRDRNYRVVATSRSI-----------KPSADPDIHTVAGDIS 78

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
             ++  +  ++ ++++         I  L+NNAG+        +T E YD  +  N  G 
Sbjct: 79  KPETADRIVREGIERF-------GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGF 131

Query: 182 FFLTKLLLP-LLKNSPVPSRIVNVTS 206
           F +T+     +LK       IV++T+
Sbjct: 132 FHITQRAAAEMLKQG--SGHIVSITT 155

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 90.7 bits (226), Expect = 4e-21
 Identities = 47/223 (21%), Positives = 79/223 (35%), Gaps = 34/223 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG T G+G   A   +R G +V + GRS+  +   +AD+  +    ++   Q D+S
Sbjct: 12  SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL-DQLGSGKVIGVQTDVS 70

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
                              +    I ++  NAG+   A  + +TPE  + + + N  G F
Sbjct: 71  DRAQCDALAGRAV------EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTF 124

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCYPCARIYEY 241
           +  +  L  L  S    R+V  +S T          +                    Y  
Sbjct: 125 YAVQACLDALIASGS-GRVVLTSSITGPITGYPGWSH--------------------YGA 163

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           +K   L F       L       ++V A  PG + T  + E  
Sbjct: 164 TKAAQLGFMRTAAIELA---PHKITVNAIMPGNIMTEGLLENG 203

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 90.3 bits (225), Expect = 4e-21
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 15/145 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG+TSG+G   A  L+R G ++VL G      +  +A+I      A       DLS
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAV--HHPADLS 61

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
               +   F  + +++         + +L+NNAGI  +A   +   E +D++++ N    
Sbjct: 62  DVAQIEALFALAEREF-------GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAV 114

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           F  T+L LP ++      RI+N+ S
Sbjct: 115 FHGTRLALPGMRARNW-GRIINIAS 138

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 90.7 bits (226), Expect = 4e-21
 Identities = 25/149 (16%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 123
             +VTG  SG+G   A  L   G  V++VGR+   L+  + ++ +   +   +     D+
Sbjct: 13  TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI 72

Query: 124 SSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNY 178
           ++               +D+    H  +  +++ AG    +   +++  E + + +  N 
Sbjct: 73  TNEDET--------ARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNV 124

Query: 179 IGAFFLTKLLLP-LLKNSPVPSRIVNVTS 206
            G  ++ K     +++        V ++S
Sbjct: 125 NGTMYVLKHAAREMVRGG--GGSFVGISS 151

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 90.3 bits (225), Expect = 4e-21
 Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 15/145 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TG+  G+G A A A  REG  V +         +  A+I          A Q+D++
Sbjct: 10  SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVT 64

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
              S+      +++           + +L+NNA +   +    +T E Y+++ + N  G 
Sbjct: 65  RQDSIDAAIAATVEHA-------GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGT 117

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
            F  +     +       +I+N+ S
Sbjct: 118 LFTLQAAARQMIAQGRGGKIINMAS 142

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 90.3 bits (225), Expect = 4e-21
 Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 18/152 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS-----RNKDARLEAF 119
           + +VTGA SG+G A +  L+ EG  V           ET+  +               AF
Sbjct: 9   LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF 68

Query: 120 QVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMM 174
           Q D+S  ++     +     +           ++++ AGI          ++ + +D+++
Sbjct: 69  QADVSEARAARCLLEQVQACFSRPPS------VVVSCAGITQDEFLL--HMSEDDWDKVI 120

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           + N  G F +T+     L ++     I+N++S
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGCRGSIINISS 152

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 91.8 bits (228), Expect = 5e-21
 Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 20/152 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-------LLSETMADITSRNKDARLE 117
              +TGA+ G+G A A   +++G ++V+  +++         +     +I +    A   
Sbjct: 47  TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKA--L 104

Query: 118 AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMM 174
              VD+   Q +    + +++++         I +L+NNA  ++ ++      +  D MM
Sbjct: 105 PCIVDVRDEQQISAAVEKAIKKF-------GGIDILVNNASAISLTNTLDTPTKRLDLMM 157

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           + N  G +  +K  +P LK S V   I+N++ 
Sbjct: 158 NVNTRGTYLASKACIPYLKKSKVA-HILNISP 188

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 90.4 bits (225), Expect = 6e-21
 Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-------LLSETMADITSRNKDARLE 117
              ++G + G+G A A  ++ +G +V LV +S+         +     +I      A   
Sbjct: 11  TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA--L 68

Query: 118 AFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGI--LATSSRLTPEGYDQM 173
               D+    +V           +    +    I + +NNA    L +   +  + +D M
Sbjct: 69  PIVGDIRDGDAV--------AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLM 120

Query: 174 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 215
                 G + +++  +P +K    P  I+ ++          
Sbjct: 121 NGIQVRGTYAVSQSCIPHMKGRDNP-HILTLSPPIRLEPKWL 161

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 89.9 bits (224), Expect = 9e-21
 Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 15/145 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA SG+G A A+  +R G HV+  GR+   + E   +I      A  EA   DL+
Sbjct: 33  TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSA--EAVVADLA 89

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
             +      + L            + +L+NNAGI+  A +  ++   + ++++ N   A+
Sbjct: 90  DLEGAANVAEELAA-------TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAW 142

Query: 183 FLTKLLLP-LLKNSPVPSRIVNVTS 206
            L++     +L +     RIV + S
Sbjct: 143 VLSRSFGTAMLAHG--SGRIVTIAS 165

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 89.1 bits (222), Expect = 9e-21
 Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 15/146 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TG T G+G A A     EG  V++ GR S +  +    +       +++ FQ D S
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---GTPDQIQFFQHDSS 64

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
                          L D+       +  L+NNAGI    S    T   + ++++ N  G
Sbjct: 65  DEDGW--------TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDG 116

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
            FF T+L +  +KN  + + I+N++S
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINMSS 142

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 89.2 bits (222), Expect = 1e-20
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 16/147 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           VC+VTGA   +G A A  L+ EG  + L+  +   L +  A +  +  +A   ++  D++
Sbjct: 9   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEA--RSYVCDVT 66

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 180
           S ++V+      ++ +         I  L NNAG     A       + + ++++ N  G
Sbjct: 67  SEEAVIGTVDSVVRDF-------GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTG 119

Query: 181 AFFLTKLLLP-LLKNSPVPSRIVNVTS 206
           AF + K +   ++  +    RIVN  S
Sbjct: 120 AFHVLKAVSRQMITQN--YGRIVNTAS 144

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 29/174 (16%)

Query: 55  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 114
           VP  + ++ P  +VTGA   +G A A  L + G+ VV+   +S   + ++AD  ++ +  
Sbjct: 15  VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN 74

Query: 115 RLEAFQVDLSSFQSVLK-----FKDSLQQWLLDSDMHSSIQLLINNAGI----------- 158
                Q DL++   +            + +           +L+NNA             
Sbjct: 75  TAVVCQADLTNSNVLPASCEEIINSCFRAF-------GRCDVLVNNASAFYPTPLVQGDH 127

Query: 159 -LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVTS 206
              ++ +       +++ TN I  F LT       K +          IVN+  
Sbjct: 128 EDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD 181

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 32/146 (21%), Positives = 70/146 (47%), Gaps = 16/146 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTGA  G+G   A  L R G  V++    S+    E +A I     DA     + ++
Sbjct: 31  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA--ACVKANV 88

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
              + +++ F+++++ +         + ++ +N+G+++      +TPE +D++ + N  G
Sbjct: 89  GVVEDIVRMFEEAVKIF-------GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRG 141

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
            FF+ +     L+      R++ + S
Sbjct: 142 QFFVAREAYKHLEIG---GRLILMGS 164

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 88.7 bits (221), Expect = 1e-20
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 14/144 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
              VTGA SG+G     A +  G  ++L+ R +  L     ++ +            D++
Sbjct: 13  CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA----VAARIVADVT 68

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
             +++       +         + + +L+N+AGI     +       + Q+M+ N  G F
Sbjct: 69  DAEAMTAAAAEAEAV-------APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMF 121

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
           + ++     +        IVN+ S
Sbjct: 122 WASRAFGRAMVARG-AGAIVNLGS 144

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 88.7 bits (221), Expect = 2e-20
 Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 14/145 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA +G+G A A   ++ G  VV+    S       A I      A     + +++
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAI--GLECNVT 71

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL-ATSSRLTPEGYDQMMSTNYIGAF 182
             Q      K +L Q+         I +L+NNAG        +    ++     N    F
Sbjct: 72  DEQHREAVIKAALDQF-------GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLF 124

Query: 183 FLTKLLLP-LLKNSPVPSRIVNVTS 206
            L++L  P + K       I+N++S
Sbjct: 125 RLSQLAAPHMQKAG--GGAILNISS 147

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 19/148 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G   A  L++   HV+ + R+       + +I S   ++    +  D+S
Sbjct: 46  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESS--GYAGDVS 103

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 179
             + + +     L +         ++ +L+NNAGI    L    R+  + ++ ++ TN  
Sbjct: 104 KKEEISEVINKILTEH-------KNVDILVNNAGITRDNLFL--RMKNDEWEDVLRTNLN 154

Query: 180 GAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
             F++T+ +   ++ N     RI+N++S
Sbjct: 155 SLFYITQPISKRMINNR--YGRIINISS 180

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 88.3 bits (220), Expect = 2e-20
 Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 17/146 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + ++TG  +G+G A A   + EG  + +         E  A I +  +       + D+S
Sbjct: 9   LAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVL--TVKCDVS 64

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
               V    K  +  +           +L+NNAGI        LT E + +    N    
Sbjct: 65  QPGDVEAFGKQVISTF-------GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSG 117

Query: 182 FFLTKLLLPL-LKNSPVPSRIVNVTS 206
           F + K  +P   +N     RI+N+TS
Sbjct: 118 FLMAKAFVPGMKRNG--WGRIINLTS 141

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 88.7 bits (221), Expect = 2e-20
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 65  VCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VT A  +G+G+  A     EG  VV+       L ET   +       R+EA   D+
Sbjct: 24  VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDV 82

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
           +S ++V    D+L    ++      + +L+NNAG+        +T E +D++++      
Sbjct: 83  TSTEAV----DALITQTVEK--AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSV 136

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
              T+  L   +       IVN  S
Sbjct: 137 MRATRAALRYFRGVDHGGVIVNNAS 161

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 88.8 bits (221), Expect = 3e-20
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 19/161 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG T G+G   A   +R G +V +  RS   LS   A++        +   ++D+S
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL-GELGAGNVIGVRLDVS 101

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 179
              S     +  +  +        ++ ++  NAGI          +TPE   +++  N  
Sbjct: 102 DPGSCADAARTVVDAF-------GALDVVCANAGIFPEARLD--TMTPEQLSEVLDVNVK 152

Query: 180 GAFFLTKLLL-PLLKNSPVPSRIVNVTSFTHRNVFNA-QVN 218
           G  +  +  L PL  +     R++  +S T          +
Sbjct: 153 GTVYTVQACLAPLTASG--RGRVILTSSITGPVTGYPGWSH 191

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 88.4 bits (220), Expect = 3e-20
 Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 16/148 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + IVTGA+SG+G AAA   +REG  VV+  R+ + L+E   +I     +A   A   D+ 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEA--AALAGDVG 67

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 179
                        + L++        +    NNAG L     +   + EG+ + + TN  
Sbjct: 68  DEALH--------EALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLT 119

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSF 207
            AF   K  +P +      S +   +SF
Sbjct: 120 SAFLAAKYQVPAIAALGGGS-LTFTSSF 146

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 87.5 bits (218), Expect = 4e-20
 Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 19/147 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA  G+G A A  L+ +G  V++   ++       A I       +  A   D+S
Sbjct: 8   TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADIS 62

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 179
              SV   F +              I +L+NNA I          +  + + +++  N  
Sbjct: 63  DPGSVKALFAEIQALT-------GGIDILVNNASIVPFVAWD--DVDLDHWRKIIDVNLT 113

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           G F +T+     ++ +    R++++ S
Sbjct: 114 GTFIVTRAGTDQMRAAGKAGRVISIAS 140

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 88.0 bits (219), Expect = 4e-20
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 19/148 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA+ G+G A A  L+R G  V+    +        A       + R     ++++
Sbjct: 30  VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGR--GAVLNVN 87

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 179
              +V    + +L+++        ++ +L+NNAGI    LA   R+  + +D ++ TN  
Sbjct: 88  DATAVDALVESTLKEF-------GALNVLVNNAGITQDQLAM--RMKDDEWDAVIDTNLK 138

Query: 180 GAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
             F L++ +L P++K      RIVN+TS
Sbjct: 139 AVFRLSRAVLRPMMKAR--GGRIVNITS 164

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 87.0 bits (216), Expect = 4e-20
 Identities = 20/151 (13%), Positives = 42/151 (27%), Gaps = 30/151 (19%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM----ADITSRNKDARLEAFQ 120
             IV G    LG+A      + G+ V+ +  S++  +++      +     ++  +    
Sbjct: 5   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQT 64

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTN 177
                               +D         +   AG  A  S       +  D M+  +
Sbjct: 65  ASSLQGSQ------------VD--------GVFCVAGGWAGGSASSKDFVKNADLMIKQS 104

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 208
              +    KL    LK       +    +  
Sbjct: 105 VWSSAIAAKLATTHLKPG---GLLQLTGAAA 132

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 86.2 bits (214), Expect = 4e-20
 Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 35/146 (23%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           ++ GA+  LG+A    L ++   V+  GR S                       VD+++ 
Sbjct: 7   LLIGASGTLGSAVKERLEKKA-EVITAGRHS-------------------GDVTVDITNI 46

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFL 184
            S+ K  + + +  +D         +++  G    +  + LTPE     +S+   G   L
Sbjct: 47  DSIKKMYEQVGK--VD--------AIVSATGSATFSPLTELTPEKNAVTISSKLGGQINL 96

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHR 210
             L +  L +          T     
Sbjct: 97  VLLGIDSLNDK---GSFTLTTGIMME 119

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 88.5 bits (220), Expect = 5e-20
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 14/148 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA---RLEAFQV 121
           V IVTG  +G+G A    L   G +VV+  R    L     ++ +        R+   Q 
Sbjct: 20  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 79

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 179
           ++ + + V     S        D    I  L+NN G   L+ +  ++ +G+  ++ TN  
Sbjct: 80  NIRNEEEVNNLVKSTL------DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133

Query: 180 GAFFLTKLLLP-LLKNSPVPSRIVNVTS 206
           G F++ K +    +K       IVN+  
Sbjct: 134 GTFYMCKAVYSSWMKEH--GGSIVNIIV 159

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 86.8 bits (216), Expect = 7e-20
 Identities = 26/147 (17%), Positives = 40/147 (27%), Gaps = 22/147 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             IVT      G  +A  LS  G  V     S     E  A              Q+   
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE--------TYPQLKPM 54

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 180
           S Q   +  +     +         + +L++N           +   E Y   +    I 
Sbjct: 55  SEQEPAELIEAVTSAY-------GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIR 107

Query: 181 AFFLTKLLLPL-LKNSPVPSRIVNVTS 206
            F L   +     K       I+ +TS
Sbjct: 108 PFALVNAVASQMKKRK--SGHIIFITS 132

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 86.2 bits (214), Expect = 8e-20
 Identities = 17/148 (11%), Positives = 35/148 (23%), Gaps = 24/148 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +V G    LG+    A     + V  +    +  +              ++       
Sbjct: 9   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA---------SVIVKMTDSFTE 59

Query: 125 SFQSVLKFKDSLQQWL-LDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIG 180
               V      L     +D         ++  AG  A  +       +  D M   +   
Sbjct: 60  QADQVTAEVGKLLGDQKVD--------AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWT 111

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSFT 208
           +   + L    LK       +    +  
Sbjct: 112 STISSHLATKHLKEG---GLLTLAGAKA 136

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 86.8 bits (216), Expect = 1e-19
 Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 17/163 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG + GLG   A  L+  G  VV+  R+    SE    +T         AF+ D+S
Sbjct: 23  VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLT-EKYGVETMAFRCDVS 81

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
           +++ V K  ++++      +    +  ++N AGI     +     + + Q++  N  G +
Sbjct: 82  NYEEVKKLLEAVK------EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 135

Query: 183 FLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG 224
           ++ +     L ++      I+N+ S     +   +V    I+ 
Sbjct: 136 YVCREAFSLLRESD--NPSIINIGS-----LTVEEVTMPNISA 171

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 86.0 bits (214), Expect = 1e-19
 Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 17/147 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+ G+G   A+AL+ +G  VV    S     +    +  +   A      +++S
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKA--RGLVLNIS 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 180
             +S+  F   ++        + +I +L+NNAGI    L    R++ + +  +++TN   
Sbjct: 65  DIESIQNFFAEIK------AENLAIDILVNNAGITRDNLMM--RMSEDEWQSVINTNLSS 116

Query: 181 AFFLTKLLL-PLLKNSPVPSRIVNVTS 206
            F ++K  +  ++K      RI+++ S
Sbjct: 117 IFRMSKECVRGMMKKR--WGRIISIGS 141

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 86.1 bits (214), Expect = 2e-19
 Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 20/152 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-------HLLSETMADITSRNKDARLE 117
              +TGA+ G+G A A   +R+G +V +  +S+         +    A + +        
Sbjct: 8   TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQG--L 65

Query: 118 AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMM 174
           A + D+     V      ++  +         I +L+NNA    L  +     + +D M 
Sbjct: 66  ALKCDIREEDQVRAAVAATVDTF-------GGIDILVNNASAIWLRGTLDTPMKRFDLMQ 118

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
             N  G+F   +  LP L  +P P  I+ +  
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPNP-HILTLAP 149

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 85.6 bits (213), Expect = 2e-19
 Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 20/149 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDL 123
             IVTG++ GLG A A+ L   G ++VL G  +   L  T  +  +   +      + D+
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVV--VAKGDV 64

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 178
            + + V    K ++  +         I +L+NNAGI    L    +++ + +D +++TN 
Sbjct: 65  KNPEDVENMVKTAMDAF-------GRIDILVNNAGITRDTLML--KMSEKDWDDVLNTNL 115

Query: 179 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
             A+  TK +   +LK      +I+N+TS
Sbjct: 116 KSAYLCTKAVSKIMLKQK--SGKIINITS 142

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 15/147 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             IVTG   G+G A   A++  G +V ++ RS+    E    +  +    + +A+Q D+S
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV-GKEFGVKTKAYQCDVS 74

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 179
           +   V K  +               I  LI NAG+     AT   LT E +  +   N  
Sbjct: 75  NTDIVTKTIQQIDADL-------GPISGLIANAGVSVVKPAT--ELTHEDFAFVYDVNVF 125

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           G F   + +  L         IV  +S
Sbjct: 126 GVFNTCRAVAKLWLQKQQKGSIVVTSS 152

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 85.3 bits (212), Expect = 3e-19
 Identities = 24/147 (16%), Positives = 62/147 (42%), Gaps = 15/147 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V  VTG++ G+G A A A ++ G  V +   S     +      +    ++  A++ ++S
Sbjct: 36  VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSK--AYKCNIS 93

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 179
             +SV +      + +        +I + + NAG+             + +++++S +  
Sbjct: 94  DPKSVEETISQQEKDF-------GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLN 146

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           G ++ +  +  + K +     ++  +S
Sbjct: 147 GVYYCSHNIGKIFKKNG-KGSLIITSS 172

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 84.5 bits (210), Expect = 4e-19
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 15/148 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA+SG G A A      G  V  +  S+  L ET           ++   + D++
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHW-HAYADKVLRVRADVA 62

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS-----RLTPEGYDQMMSTNY 178
               V      +++Q+        +I +L+NNAGI   S          E +D++M+ N 
Sbjct: 63  DEGDVNAAIAATMEQF-------GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNV 115

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            G F   + +LP +        IVN+ S
Sbjct: 116 RGIFLGCRAVLPHMLLQG-AGVIVNIAS 142

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 84.5 bits (210), Expect = 6e-19
 Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TGA SG G   A   ++ G  VV+V R          +I          A   D+S
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADIS 65

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 179
               V           +++       + +L+NNAGI           PE +D+++  N  
Sbjct: 66  KEADV--------DAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVR 117

Query: 180 GAFFLTKLLLPLLKNS---PVPSRIVNVTS 206
           G + +T  L+P  K +        I+NV S
Sbjct: 118 GVYLMTSKLIPHFKENGAKGQECVILNVAS 147

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 84.1 bits (209), Expect = 6e-19
 Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TGA  G+G A     ++EG  +V        L E    + +           +D++
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH-------PVVMDVA 59

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
              SV + F ++L            +  +++ AGI       ++  E ++ ++  N  G+
Sbjct: 60  DPASVERGFAEALAHL-------GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGS 112

Query: 182 FFLTKLLL-PLLKNSPVPSRIVNVTS 206
           F + K     + + +  P  IV   S
Sbjct: 113 FLVAKAASEAMREKN--PGSIVLTAS 136

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 83.7 bits (208), Expect = 8e-19
 Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 20/149 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTGA+ G+G A A  L+++G +VV+    +    +E + +I     DA   A + D+
Sbjct: 6   VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAI--AVRADV 63

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 178
           ++ + V    K ++  +         + +L+NNAG+    L    R+  E +D +++TN 
Sbjct: 64  ANAEDVTNMVKQTVDVF-------GQVDILVNNAGVTKDNLLM--RMKEEEWDTVINTNL 114

Query: 179 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
            G F  TK +   +++      RIVN+ S
Sbjct: 115 KGVFLCTKAVSRFMMRQR--HGRIVNIAS 141

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 83.7 bits (208), Expect = 9e-19
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 20/150 (13%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVD 122
           PV +VTGA+ G+G A A +L + G  V++    S     E    I +    A    F  D
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAI--TFGGD 59

Query: 123 LSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTN 177
           +S    V    K ++  W        +I +++NNAGI    L    R+    +D+++  N
Sbjct: 60  VSKEADVEAMMKTAIDAW-------GTIDVVVNNAGITRDTLLI--RMKKSQWDEVIDLN 110

Query: 178 YIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
             G F  T+     ++K      RI+N+ S
Sbjct: 111 LTGVFLCTQAATKIMMKKR--KGRIINIAS 138

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 83.3 bits (207), Expect = 1e-18
 Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 24/149 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +VT A    G AA  AL+++G+ VV    S    +E              E       
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQR--------FESENPGTIAL 54

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTNY 178
           + Q   +    +LQ          +I  +++N  I            +     QM     
Sbjct: 55  AEQKPERLVDATLQHG-------EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALS 107

Query: 179 IGAFFLTKLLLP-LLKNSPVPSRIVNVTS 206
           I    L +  +  L       + ++ +TS
Sbjct: 108 IFPILLLQSAIAPLRAAG--GASVIFITS 134

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 37/150 (24%), Positives = 52/150 (34%), Gaps = 22/150 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TG  SGLG A       EG  V ++ +S+  L E                   D+ 
Sbjct: 7   VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVR 61

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-------TPEGYDQMMST 176
           S Q   +  +  L  +         I  LI NAGI   S+ L           +D +   
Sbjct: 62  SLQDQKRAAERCLAAF-------GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHV 114

Query: 177 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           N  G     K  LP L +S     +V   S
Sbjct: 115 NVKGYIHAVKACLPALVSS--RGSVVFTIS 142

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 29/148 (19%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
              VTGA  G+G A A A    G  V               D     +        +D++
Sbjct: 9   NVWVTGAGKGIGYATALAFVEAGAKVTG------------FDQAFTQEQYPFATEVMDVA 56

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
               V +  +  L +          +  L+N AGIL   +  +L+ E + Q  + N  GA
Sbjct: 57  DAAQVAQVCQRLLAET-------ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGA 109

Query: 182 FFLTKLLLPLLKNSPVPSR---IVNVTS 206
           F L +  +          R   IV V S
Sbjct: 110 FNLFQQTMNQF----RRQRGGAIVTVAS 133

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 82.9 bits (206), Expect = 1e-18
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 20/149 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 123
             +VTGA+ G+G + A  L+ EG++V +    S       + +I ++  D+   A Q ++
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSF--AIQANV 63

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 178
           +    V    K+ + Q+        S+ +L+NNAGI    L    R+  + +D ++ TN 
Sbjct: 64  ADADEVKAMIKEVVSQF-------GSLDVLVNNAGITRDNLLM--RMKEQEWDDVIDTNL 114

Query: 179 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
            G F   +     +L+       I+N++S
Sbjct: 115 KGVFNCIQKATPQMLRQR--SGAIINLSS 141

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 16/148 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++T  T GLG      L  +G+ V +   S     ETM +   ++ + RL+  Q D++
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKET-YKDVEERLQFVQADVT 67

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATS----SRLTPEGYDQMMSTNYI 179
             + + K  ++++  +         I  LINNAG              + +++M+  N  
Sbjct: 68  KKEDLHKIVEEAMSHF-------GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLT 120

Query: 180 GAFFLTKLLLP-LLKNSPVPSRIVNVTS 206
             F L KL++P + K +    RI+N   
Sbjct: 121 AVFHLLKLVVPVMRKQN--FGRIINYGF 146

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 82.9 bits (206), Expect = 1e-18
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 16/147 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG+T G+G A A  L+  G  V++ G S         +I +     +    +++L 
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEI-ANKYGVKAHGVEMNLL 67

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 180
           S +S+ K  + +       ++   I +L+NNAGI    L    R++   +++++  N  G
Sbjct: 68  SEESINKAFEEIY------NLVDGIDILVNNAGITRDKLFL--RMSLLDWEEVLKVNLTG 119

Query: 181 AFFLTKLLL-PLLKNSPVPSRIVNVTS 206
            F +T+  L  ++K      RIVN++S
Sbjct: 120 TFLVTQNSLRKMIKQR--WGRIVNISS 144

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 18/147 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           VCIVTG  SG+G A A   ++ G +VV+   +         +I      ++    +VD+S
Sbjct: 29  VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVS 83

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
           S +          + +++        + +L+NNAG   T +   +  E +D++MS N  G
Sbjct: 84  SAKDA--------ESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKG 135

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSF 207
            F  +K ++P+++ +   S I+N TS+
Sbjct: 136 IFLCSKYVIPVMRRNGGGS-IINTTSY 161

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 83.0 bits (206), Expect = 2e-18
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 20/149 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           + +VTGA+ G+G A A  L+  G  V +    S+    E +A I +   +A   A + D+
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAF--AVKADV 87

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 178
           S    V   F   +++W         + +L+NNAGI    L    R+  + +  ++  N 
Sbjct: 88  SQESEVEALFAAVIERW-------GRLDVLVNNAGITRDTLLL--RMKRDDWQSVLDLNL 138

Query: 179 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
            G F  ++     +LK      RI+N+ S
Sbjct: 139 GGVFLCSRAAAKIMLKQR--SGRIINIAS 165

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 82.7 bits (205), Expect = 2e-18
 Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 15/149 (10%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V  +TG+ SG+GAA    L+R G  V+ + R     ++  AD+++     R  A    L 
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQ---ADIEADLSTP--GGRETAVAAVLD 57

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNY 178
               VL   D L           +S + + +N  G+ A        L+       +    
Sbjct: 58  RCGGVL---DGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS 114

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSF 207
           I A       LP+++              
Sbjct: 115 IAATQPGAAELPMVEAML-AGDEARAIEL 142

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 83.0 bits (206), Expect = 2e-18
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 24/145 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G A   AL   G  V +  R+   ++  +                 DL 
Sbjct: 30  VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------------HLPGDLR 76

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
                                    + +++NNAG+++       T   +   +  N    
Sbjct: 77  EAAYADGLPGAVAAGL-------GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAP 129

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           F + +  +PL+  +     IVNV S
Sbjct: 130 FRICRAAIPLMAAAGG-GAIVNVAS 153

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 82.5 bits (205), Expect = 2e-18
 Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 21/146 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG   G+G A A A +REG  V L         E    I           FQVDL 
Sbjct: 8   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGGA-------FFQVDLE 59

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
             +  ++  +++             + +L+NNA I A  S   +    + +++  N    
Sbjct: 60  DERERVRFVEEAAYAL-------GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAP 112

Query: 182 FFLTKLLLP-LLKNSPVPSRIVNVTS 206
             L+ L    + K       IVNV S
Sbjct: 113 MHLSALAAREMRKVG--GGAIVNVAS 136

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 83.0 bits (206), Expect = 3e-18
 Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 26/157 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE------TMADITSRNKDARLEA 118
             +VTG  SG+G AAA A +REG  V +     +L +E        A I    + A    
Sbjct: 51  KALVTGGDSGIGRAAAIAYAREGADVAIN----YLPAEEEDAQQVKALIEECGRKA--VL 104

Query: 119 FQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMM 174
              DLS           + +           + +L   AG       +   T E + Q  
Sbjct: 105 LPGDLSDESFARSLVHKAREAL-------GGLDILALVAGKQTAIPEIKDLTSEQFQQTF 157

Query: 175 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN 211
           + N    F++T+  +PLL      + I+  +S     
Sbjct: 158 AVNVFALFWITQEAIPLLPKG---ASIITTSSIQAYQ 191

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 20/147 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA+ G+G A A  L+  G  V+    S          +    K        ++++
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-----GMALNVT 65

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 180
           + +S+     ++       D    + +L+NNAGI    L    R+  E +  +M TN   
Sbjct: 66  NPESIEAVLKAIT------DEFGGVDILVNNAGITRDNLLM--RMKEEEWSDIMETNLTS 117

Query: 181 AFFLTKLLL-PLLKNSPVPSRIVNVTS 206
            F L+K +L  ++K      RI+NV S
Sbjct: 118 IFRLSKAVLRGMMKKR--QGRIINVGS 142

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 82.4 bits (204), Expect = 3e-18
 Identities = 42/230 (18%), Positives = 77/230 (33%), Gaps = 47/230 (20%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +++G  +G+GAA    L   G  +V +       +E +AD+++   + R +A    L+
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD---AEVIADLSTA--EGRKQAIADVLA 57

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
                                   +  L+  AG+   +  L       ++S NY GA  L
Sbjct: 58  KC-------------------SKGMDGLVLCAGLGPQTKVL-----GNVVSVNYFGATEL 93

Query: 185 TKLLLPLLKNSPVPSRIVNVTS--------FTHRNVFNAQVNNETITGKFFLRSKCYPCA 236
               LP LK    P+  V ++S          +      +   E         +      
Sbjct: 94  MDAFLPALKKGHQPA-AVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152

Query: 237 RIYEYSKLCLLIFSYELHRNLGLDKSRH---VSVIAADPGVVKTNIMREV 283
             Y  SK  L +      R            ++ IA  PG  +T +++  
Sbjct: 153 LAYAGSKNALTVAV----RKRAAAWGEAGVRLNTIA--PGATETPLLQAG 196

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 82.1 bits (204), Expect = 3e-18
 Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 19/149 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 123
             ++TGA+ G+G A A  L+ +GF + +  G++     E   +   R     +     +L
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPL-VAVLGANL 61

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 178
              ++       + +           +  L+NNAGI    L    R+  E ++ ++  N 
Sbjct: 62  LEAEAATALVHQAAEVL-------GGLDTLVNNAGITRDTLLV--RMKDEDWEAVLEANL 112

Query: 179 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
              F  T+  +  ++K      RIVN+TS
Sbjct: 113 SAVFRTTREAVKLMMKAR--FGRIVNITS 139

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 14/146 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 123
           V  VTG   GLGAA +  L   G  V +     +  +S  +       +D +  A+ VD+
Sbjct: 27  VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFK--AYAVDV 84

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
           + F+S  +  + +            + +LINNAGI   AT  ++T   +D +M T+    
Sbjct: 85  ADFESCERCAEKVL------ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAM 138

Query: 182 FFLTKLLL-PLLKNSPVPSRIVNVTS 206
           F +TK  +  +++      RIVN+ S
Sbjct: 139 FNVTKQFIAGMVERR--FGRIVNIGS 162

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 23/145 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTG +SG+G A   AL R G  VV               +  ++     + F++D++
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVS------------VSLDEKSDVNVSDHFKIDVT 63

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
           + + V +  + + +++         I +L+NNAGI   S       E + +++  N  G+
Sbjct: 64  NEEEVKEAVEKTTKKY-------GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGS 116

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTS 206
           + + K  +P++      S I+N+ S
Sbjct: 117 YLMAKYTIPVMLAIGHGS-IINIAS 140

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 82.2 bits (204), Expect = 4e-18
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 26/146 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA+ G+G A A     EG  V+               I     +A+ +  + D++
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSKVID------------LSI-HDPGEAKYDHIECDVT 56

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
           +   V        +  +D     + SI +L+NNAGI +      ++   + +++  N  G
Sbjct: 57  NPDQV--------KASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFG 108

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
            ++ +K  +P +  S     IVN++S
Sbjct: 109 YYYASKFAIPYMIRSR-DPSIVNISS 133

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 82.2 bits (204), Expect = 4e-18
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 20/147 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGAT G+G A A     +G  V L G     L E  AD+        +  F  +LS
Sbjct: 29  KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLS 83

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 180
             +S+ +  +  +           I +L+NNAGI    L    R+  + +D +++ N   
Sbjct: 84  DRKSIKQLAEVAE------REMEGIDILVNNAGITRDGLFV--RMQDQDWDDVLAVNLTA 135

Query: 181 AFFLTKLLL-PLLKNSPVPSRIVNVTS 206
           A  LT+ L+  +++      RI+N+TS
Sbjct: 136 ASTLTRELIHSMMRRR--YGRIINITS 160

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 82.3 bits (204), Expect = 5e-18
 Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 27/156 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV------------GRSSHLLSETMADITSRNK 112
           V +VTG   G G + A  L+ EG  ++L               +S  L E   ++     
Sbjct: 12  VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV--EKT 69

Query: 113 DARLEAFQVDLSSFQSVLK-FKDSLQQW-LLDSDMHSSIQLLINNAGILATSSRLTPEGY 170
             +    +VD+    +V +   +++ ++  LD        +++ NAGI    + L  + +
Sbjct: 70  GRKAYTAEVDVRDRAAVSRELANAVAEFGKLD--------VVVANAGICPLGAHLPVQAF 121

Query: 171 DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
                 +++G        LP L +    + I+   S
Sbjct: 122 ADAFDVDFVGVINTVHAALPYLTSG---ASIITTGS 154

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 81.0 bits (201), Expect = 9e-18
 Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 20/145 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+T A  G+G AAA A +REG  V+    +   L E         K   ++   +D++
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL-------EKYPGIQTRVLDVT 60

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
             + + +F +              + +L N AG +   +      + +D  M+ N    +
Sbjct: 61  KKKQIDQFANE----------VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMY 110

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSF 207
            + K  LP +      + I+N++S 
Sbjct: 111 LMIKAFLPKMLAQKSGN-IINMSSV 134

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 21/148 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG   G+GA    A    G  VV+  +          ++      A       D++
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAV--FILCDVT 64

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 179
               V        + L+         +  ++NNAG      R    + +G+ Q++  N +
Sbjct: 65  QEDDV--------KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLL 116

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSF 207
           G + LTKL LP L+ S     ++N++S 
Sbjct: 117 GTYTLTKLALPYLRKS--QGNVINISSL 142

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 81.0 bits (201), Expect = 1e-17
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 20/149 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TGA  G+G   +  L+R G  VVL       L+   A +             VDL+
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLT 67

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNY 178
           +  SV        + L+D   D    + ++ NNA     +     ++T + +D   + N 
Sbjct: 68  NEVSV--------RALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNA 119

Query: 179 IGAFFLTKLLLPLLKNSPVPSRIVNVTSF 207
            G   + K  +P L ++   + IVN++S 
Sbjct: 120 RGTMLMCKYAIPRLISAGGGA-IVNISSA 147

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 80.6 bits (200), Expect = 1e-17
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 14/144 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             I+TG   GLGA AA      G  VVL        + T  ++             +D++
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVT 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
             +   +     +      +   S+  L+NNAGI         + E + +++  N  G F
Sbjct: 62  IEEDWQRVVAYAR------EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVF 115

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
              K ++P +K++     IVN++S
Sbjct: 116 IGMKTVIPAMKDAG-GGSIVNISS 138

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 34/181 (18%)

Query: 59  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLE 117
           T    PV +VTGA   LG + A  L  EG+ V L    S    +   A + +R  +    
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAI 63

Query: 118 AFQVDLSSFQSVLKFKDSLQQWLLDSDM-----------HSSIQLLINNAGIL--ATSSR 164
             Q DLS+  +           +                     +L+NNA         R
Sbjct: 64  TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 123

Query: 165 LTPEGYD--------------QMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVT 205
              +G++               +  +N I  +FL K     +  +P         I+N+ 
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 206 S 206
            
Sbjct: 184 D 184

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 79.9 bits (198), Expect = 2e-17
 Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 14/146 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 123
           +  VTG   G+G +    L ++GF VV     +     + + D  +   D    A + ++
Sbjct: 15  IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFY--ASEGNV 72

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
             + S  +  D ++           I +L+NNAGI       ++T E +  ++ TN    
Sbjct: 73  GDWDSTKQAFDKVK------AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSL 126

Query: 182 FFLTKLLL-PLLKNSPVPSRIVNVTS 206
           F +TK ++  +++      RI+N++S
Sbjct: 127 FNVTKQVIDGMVERG--WGRIINISS 150

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 82.3 bits (204), Expect = 2e-17
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 23/149 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+GA  A   +R+G  VV +            D+          A  +D++
Sbjct: 215 VAVVTGAARGIGATIAEVFARDGATVVAIDV-----DGAAEDLKRVADKVGGTALTLDVT 269

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTNYI 179
           +  +V K    + +          + +L+NNAGI     LA    +  + +D +++ N +
Sbjct: 270 ADDAVDKITAHVTE-----HHGGKVDILVNNAGITRDKLLA---NMDEKRWDAVIAVNLL 321

Query: 180 GAFFLTKLLLP--LLKNSPVPSRIVNVTS 206
               LT+ L+    +       R++ ++S
Sbjct: 322 APQRLTEGLVGNGTIGEGG---RVIGLSS 347

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 24/155 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV------------GRSSHLLSETMADITSRNK 112
           V  +TGA  G G A A  L+ +G  ++ V              +   L+ T+  +   + 
Sbjct: 15  VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV--EDI 72

Query: 113 DARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD 171
            +R+ A Q D+   +S+    +  L +          + +++ NAGI         +G+ 
Sbjct: 73  GSRIVARQADVRDRESLSAALQAGLDEL-------GRLDIVVANAGI--APMSAGDDGWH 123

Query: 172 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            ++  N  G +   K+ +P L        IV ++S
Sbjct: 124 DVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS 158

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 80.9 bits (200), Expect = 2e-17
 Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 34/181 (18%)

Query: 59  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLE 117
           T    PV +VTGA   LG + A  L  EG+ V L    S    +   A + +R  +    
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAI 100

Query: 118 AFQVDLSSFQSVLKFKDSLQQWLLDSDM-----------HSSIQLLINNAGIL--ATSSR 164
             Q DLS+  +           +                     +L+NNA         R
Sbjct: 101 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 160

Query: 165 LTPEGYD--------------QMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVT 205
              +G++               +  +N I  +FL K     +  +P         I+N+ 
Sbjct: 161 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220

Query: 206 S 206
            
Sbjct: 221 D 221

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 79.5 bits (197), Expect = 3e-17
 Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 24/147 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TGA+SG+G+A A  L + G  V++ G +   L      +              +L+
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYT-----IEVCNLA 70

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 180
           + +                   S++ +L+ NAGI    LA   R+  + +D+++  N   
Sbjct: 71  NKEECSNLISK----------TSNLDILVCNAGITSDTLAI--RMKDQDFDKVIDINLKA 118

Query: 181 AFFLTKLLL-PLLKNSPVPSRIVNVTS 206
            F L +  +  +++      RI+N++S
Sbjct: 119 NFILNREAIKKMIQKR--YGRIINISS 143

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 79.9 bits (198), Expect = 3e-17
 Identities = 34/162 (20%), Positives = 59/162 (36%), Gaps = 17/162 (10%)

Query: 65  VCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
           V +VTGA    G+G  AA   +  G  V +   S    +E       +    + +A++  
Sbjct: 22  VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQ 81

Query: 123 LSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYI 179
           + S++S  K  KD +  +         I   I NAG  A S     + E ++ ++  +  
Sbjct: 82  VDSYESCEKLVKDVVADF-------GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLN 134

Query: 180 GAFFLTKLLL-PLLKNSPVPSRIVNVTSF--THRNVFNAQVN 218
           G F   K +     +       +V   S      N    Q +
Sbjct: 135 GTFHCAKAVGHHFKERG--TGSLVITASMSGHIANFPQEQTS 174

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 79.1 bits (196), Expect = 3e-17
 Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 22/145 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG + G+G A A AL   G+ V +  R+    +++                  DL 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQS----------LGAVPLPTDLE 53

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
                   K +L+           + +L++ A +     +  L+ E + +++  +   AF
Sbjct: 54  KDDPKGLVKRALEAL-------GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAF 106

Query: 183 FLTKLLLP-LLKNSPVPSRIVNVTS 206
            L +   P + +      R++ + S
Sbjct: 107 LLAQAAAPHMAEAG--WGRVLFIGS 129

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 79.9 bits (198), Expect = 3e-17
 Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 24/149 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V IVTGA +G+G A A  L+ EG HV+               I          A +VD+S
Sbjct: 31  VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVS 85

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
             Q +          ++D+       +  L+ NAG++  +S    T E +D++++ N  G
Sbjct: 86  DEQQI--------IAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRG 137

Query: 181 AFFLTKLLLPLLKNSPVPSR---IVNVTS 206
           A+  TK   P +           IVN++S
Sbjct: 138 AWLCTKHAAPRMI----ERGGGAIVNLSS 162

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 80.4 bits (199), Expect = 4e-17
 Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 24/157 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL------------LSETMADITSRNK 112
           V  +TGA  G G   A  L+++G  +V +                  L ET+  +    +
Sbjct: 48  VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV--EEQ 105

Query: 113 DARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEG 169
             R+ A Q D+    S+     ++L ++         I +L++N GI        LT + 
Sbjct: 106 GRRIIARQADVRDLASLQAVVDEALAEF-------GHIDILVSNVGISNQGEVVSLTDQQ 158

Query: 170 YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           +  ++ TN IGA+   + +LP +        ++ V+S
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSS 195

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 78.7 bits (195), Expect = 4e-17
 Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 26/149 (17%)

Query: 60  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 119
           GI+    +V  A+ G+G A A  LS+EG  V +  R+  LL  +                
Sbjct: 16  GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH-----------RYV 64

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTN 177
             DL     +L             +    + +L+ NAG         LT E + + + + 
Sbjct: 65  VCDLRKDLDLLF------------EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSL 112

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           ++    + +  LP +K      RIV +TS
Sbjct: 113 FLNMIKIVRNYLPAMKEKGWG-RIVAITS 140

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 79.1 bits (196), Expect = 5e-17
 Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 25/158 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV-------------GRSSHLLSETMADITSRN 111
           V  +TGA  G G + A  L+ EG  ++                 S   L ET   +   +
Sbjct: 17  VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV--ED 74

Query: 112 KDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPE 168
           +  +     +D+    ++ +   D ++Q+         + +++ NAG+L       LT E
Sbjct: 75  QGRKALTRVLDVRDDAALRELVADGMEQF-------GRLDVVVANAGVLSWGRVWELTDE 127

Query: 169 GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
            +D ++  N  G +   +  +P +  +     IV V+S
Sbjct: 128 QWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS 165

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 78.8 bits (195), Expect = 7e-17
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 27/159 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV-------------GRSSHLLSETMADITSRN 111
           V  +TGA  G G A A  ++ EG  ++ V               S   LSET+  +    
Sbjct: 13  VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV--EA 70

Query: 112 KDARLEAFQVDLSSFQSVLK-FKDSLQQW-LLDSDMHSSIQLLINNAGILATSS--RLTP 167
            + R+ A  VD   F  + K   D +     LD        +++ NAG+ A  +   +TP
Sbjct: 71  ANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLD--------IIVANAGVAAPQAWDDITP 122

Query: 168 EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           E +  +M  N  G +       P +        I+ ++S
Sbjct: 123 EDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS 161

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 78.4 bits (194), Expect = 7e-17
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 30/148 (20%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG   G+G A A A +  G  V +  RS                     A + D++
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAGDKVAITYRSG-------------EPPEGFLAVKCDIT 69

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 179
             + V + +K+  +           +++LI NAG+    L    R++ E +  ++ TN  
Sbjct: 70  DTEQVEQAYKEIEETH-------GPVEVLIANAGVTKDQLLM--RMSEEDFTSVVETNLT 120

Query: 180 GAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
           G F + K     +L+      R+V ++S
Sbjct: 121 GTFRVVKRANRAMLRAK--KGRVVLISS 146

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 30/148 (20%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG   G+G A A  L+ +G  V +  R S                  L   +VD++
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-------------GAPKGLFGVEVDVT 63

Query: 125 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 179
              +V + F    +           +++L++NAG+         R+T E ++++++ N  
Sbjct: 64  DSDAVDRAFTAVEEHQ-------GPVEVLVSNAGLSADAFLM--RMTEEKFEKVINANLT 114

Query: 180 GAFFLTKLLL-PLLKNSPVPSRIVNVTS 206
           GAF + +     + +N     R++ + S
Sbjct: 115 GAFRVAQRASRSMQRNK--FGRMIFIGS 140

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 17/147 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDL 123
             ++TG  SG+G A + A ++EG ++ +         +ET   +        L     DL
Sbjct: 49  NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL--LPGDL 106

Query: 124 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYI 179
           S  Q      +++++Q         S+ +L+NN            +T E  ++    N  
Sbjct: 107 SDEQHCKDIVQETVRQL-------GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTS 206
             F +TK  L  LK       I+N  S
Sbjct: 160 SYFHVTKAALSHLKQG---DVIINTAS 183

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 27/159 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV------------GRSSHLLSETMADITSRNK 112
           V  +TGA  G G + A  L+REG  ++ +              +   L+ET+  +     
Sbjct: 30  VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV--EAL 87

Query: 113 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TP 167
             R+ A QVD+  F ++        Q  +D        + +++ NA + +  +RL    P
Sbjct: 88  GRRIIASQVDVRDFDAM--------QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDP 139

Query: 168 EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           + +  M+  N  GA+   ++ +P +        IV  +S
Sbjct: 140 KTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS 178

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 76.8 bits (190), Expect = 3e-16
 Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 14/144 (9%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +V+G   G+GA+   A+  EG  VV             A++             +D++
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVT 63

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
                    D+             + +L+NNAGIL   +        + +++  N  G F
Sbjct: 64  QPAQWKAAVDTAV------TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVF 117

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
              + ++  +K +   S I+N++S
Sbjct: 118 LGIRAVVKPMKEAGRGS-IINISS 140

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 76.4 bits (189), Expect = 3e-16
 Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 19/147 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG  SG+G      L  EG  V     +     +  A++    + +     + D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSM--FVRHDVS 62

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 180
           S              ++ +      ++ +L+NNAGIL          E + +++  N   
Sbjct: 63  SEADW--------TLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTES 114

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTSF 207
            F   +  +  +K +     I+N+ S 
Sbjct: 115 VFIGCQQGIAAMKET--GGSIINMASV 139

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 76.0 bits (188), Expect = 7e-16
 Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 27/158 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL------------LSETMADITSRNK 112
             ++TG   G+G + A AL+  G  + +  R  +             L+ET+A +     
Sbjct: 12  TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV--EKT 69

Query: 113 DARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEG 169
             R  + +VD+    ++     ++             I + I NAGI   A    +    
Sbjct: 70  GRRCISAKVDVKDRAALESFVAEAEDTL-------GGIDIAITNAGISTIALLPEVESAQ 122

Query: 170 YDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 206
           +D+++ TN  G F     + P ++K +    RIV V+S
Sbjct: 123 WDEVIGTNLTGTFNTIAAVAPGMIKRN--YGRIVTVSS 158

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 31/163 (19%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLV----------------GRSSHLLSETMADIT 108
           V  VTGA  G G + A  L++EG  ++ V                  +   L+ET   + 
Sbjct: 13  VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV- 71

Query: 109 SRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--- 163
            +  + R+   +VD+  + ++        +  +DS  +    + +++ NAGI        
Sbjct: 72  -KGHNRRIVTAEVDVRDYDAL--------KAAVDSGVEQLGRLDIIVANAGIGNGGDTLD 122

Query: 164 RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           + + E + +M+  N  G +   K  +P +        I+  +S
Sbjct: 123 KTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS 165

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 74.6 bits (184), Expect = 1e-15
 Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 32/153 (20%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG  SGLG AAA AL   G+ VV+             D+    +D      + D++
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVV------------LDLRREGEDLI--YVEGDVT 49

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMMSTNY 178
             + V +     Q+        + +  +++ AG+      L        E + +++  N 
Sbjct: 50  REEDVRRAVARAQE-------EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNL 102

Query: 179 IGAFFLTKLLLPL-LKNSPVPS----RIVNVTS 206
           +G F + +L      +N P        IVN  S
Sbjct: 103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTAS 135

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 74.6 bits (184), Expect = 2e-15
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 22/157 (14%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +K  V IVTGA+SGLGAA    L++EG  V+ +        E  A++      A +    
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRN 59

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMM 174
            D+++           +Q          +  L+N AG       L  S     + + + +
Sbjct: 60  ADVTNEADATAALAFAKQ------EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTV 113

Query: 175 STNYIGAFFLTKLLLPLL-KNSPVPS----RIVNVTS 206
           + N IG F + +L   ++ +  P        IVN  S
Sbjct: 114 AVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTAS 150

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 75.6 bits (186), Expect = 2e-15
 Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 48/230 (20%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS----SHLLSETMADITSRNKDARLE 117
            + + ++TGA+SG G   A AL+  G  V    R     +    E +A     N    L 
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDV-DLR 62

Query: 118 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMS 175
             ++D+ S  SV +  D +            I +LI+NAG +        TPE + ++  
Sbjct: 63  TLELDVQSQVSVDRAIDQII------GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYD 116

Query: 176 TNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 233
            N +    + +  LP +  +       ++ ++S                +          
Sbjct: 117 INVLSTQRVNRAALPHMRRQKH---GLLIWISS---------------SSSAGGT----P 154

Query: 234 PCARIYEYSKLCLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNI 279
           P    Y  +K  +   +     EL    G+      S+I   PG   +  
Sbjct: 155 PYLAPYFAAKAAMDAIAVQYAREL-SRWGI----ETSIIV--PGAFTSGT 197

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 73.9 bits (182), Expect = 4e-15
 Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 23/158 (14%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
            +    IV+G   GLG A    L  +G  VV+   ++        ++       R E   
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVS 82

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEG-------YDQM 173
            +++S  SVL   ++  Q             ++ + G       +  +G       + + 
Sbjct: 83  TNVTSEDSVLAAIEAANQL------GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKT 136

Query: 174 MSTNYIGAFFLTKLLLPL-LKNSPVPS----RIVNVTS 206
           +     G + + +L+        P  +     +V   S
Sbjct: 137 IDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTAS 174

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 73.4 bits (181), Expect = 4e-15
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 24/159 (15%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           +K  V ++TG  SGLG A A  L  +G   VL+   +         +             
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAP 64

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--------LATSSRLTPEGYDQ 172
            D++S + V       +           + + +N AGI        L      T E + +
Sbjct: 65  ADVTSEKDVQTALALAKGK------FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQR 118

Query: 173 MMSTNYIGAFFLTKLLLPL-LKNSPVPS----RIVNVTS 206
           ++  N +G F + +L+     +N P        I+N  S
Sbjct: 119 VLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS 157

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TG   G+G   A    R G  VV+   +     +   +I S      +     D++
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVT 74

Query: 125 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSR----LTPEGYDQMMSTNY 178
             + V        + L+D+    H  + ++  N G+L+T+         E + ++M  N 
Sbjct: 75  KDEDV--------RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINV 126

Query: 179 IGAFFLTKLLLPLLKNSPVPSR---IVNVTSF 207
            GAF + K    ++    +P++   IV   S 
Sbjct: 127 YGAFLVAKHAARVM----IPAKKGSIVFTASI 154

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 33/159 (20%), Positives = 60/159 (37%), Gaps = 28/159 (17%)

Query: 61  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
           I+  V +VTG  SGLG A    L   G  VV++      +   + D        R     
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGD--------RARFAA 58

Query: 121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMM 174
            D++   +V    D  +          ++++++N AG       L+     +   + +++
Sbjct: 59  ADVTDEAAVASALDLAET-------MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIV 111

Query: 175 STNYIGAFFLTKLLLPL-LKNSPVPS------RIVNVTS 206
             N +G+F + +L      K  PV         I+N  S
Sbjct: 112 DINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTAS 150

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 20/144 (13%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 127
           VTGA+SG G A A A    G  V+   R     +E + D+ +   D R EA  +D++  +
Sbjct: 10  VTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAAYPD-RAEAISLDVTDGE 64

Query: 128 SVLK-FKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAFFL 184
            +     D L +       +  + +L+NNAG   +      T      +   +  G   L
Sbjct: 65  RIDVVAADVLAR-------YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARL 117

Query: 185 TKLLLPLL--KNSPVPSRIVNVTS 206
           T+ LLP +  + S     +VN++S
Sbjct: 118 TRALLPQMRERGSG---SVVNISS 138

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 48/229 (20%), Positives = 80/229 (34%), Gaps = 50/229 (21%)

Query: 63  RPVCIVTGATSGLGAAAAYALSRE---GFHVVLVGRSSHLLSETMADITSRNKDA-RLEA 118
           R V ++TG +SG+G   A  L+ +    F V    R             +       LE 
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 119 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMST 176
            Q+D+   +SV   ++ + +  +D        +L+ NAG+  L     L  +    ++  
Sbjct: 62  LQLDVRDSKSVAAARERVTEGRVD--------VLVCNAGLGLLGPLEALGEDAVASVLDV 113

Query: 177 NYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 234
           N +G   + +  LP +K   S    R++   S               + G   L     P
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGS---GRVLVTGS---------------VGGLMGL-----P 150

Query: 235 CARIYEYSKLCLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNI 279
              +Y  SK  L          L    G+    H+S+I    G V T  
Sbjct: 151 FNDVYCASKFALEGLCESLAVLL-LPFGV----HLSLIE--CGPVHTAF 192

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 65.5 bits (160), Expect = 4e-12
 Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 27/160 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL--VGRSSH---LLSETMAD-----ITSRNKDA 114
           V IVTGA  G+G A A A + EG  VV+  +G           + A      IT+   +A
Sbjct: 29  VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEA 88

Query: 115 RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYD 171
              A   +++ +       + +++ +         + +L+NNAGI+     +  + E +D
Sbjct: 89  --VADGSNVADWDQAAGLIQTAVETF-------GGLDVLVNNAGIVRDRMIANTSEEEFD 139

Query: 172 QMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVTS 206
            +++ +  G F   +      +           RI+N +S
Sbjct: 140 AVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS 179

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 66.3 bits (162), Expect = 5e-12
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL---------VGRSSHLLSETMADITSRNKDAR 115
           V I+TGA  GLG   +   ++ G  VV+          G +S      + +I      A 
Sbjct: 10  VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA- 68

Query: 116 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQM 173
             A   ++     +   + +++ +        ++ ++INNAGIL  A+  ++T + Y  +
Sbjct: 69  -VADYNNVLDGDKI--VETAVKNF-------GTVHVIINNAGILRDASMKKMTEKDYKLV 118

Query: 174 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
           +  +  GAF +TK   P  +      RIVN +S
Sbjct: 119 IDVHLNGAFAVTKAAWPYFQKQKY-GRIVNTSS 150

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 19/146 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL--VGRSSHLLSETMADITSRNKDARLEAFQVD 122
           V ++TGA +GLG   A   ++ G  VV+     ++    +T+ +I +   +A        
Sbjct: 324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT----KTVDEIKAAGGEA-------- 371

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
                 V K  +++ + ++D   + +I +L+NNAGIL   + ++++ + +D +   + IG
Sbjct: 372 WPDQHDVAKDSEAIIKNVIDK--YGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIG 429

Query: 181 AFFLTKLLLPLLKNSPVPSRIVNVTS 206
            F L++L  P         RI+N+TS
Sbjct: 430 TFNLSRLAWPYFVEKQF-GRIINITS 454

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 63.3 bits (154), Expect = 4e-11
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 23/153 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL---------VGRSSHLLSETMADITSRNKDAR 115
           V +VTGA +GLG   A   +  G  VV+          G S       + +I     +A 
Sbjct: 21  VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA- 79

Query: 116 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQM 173
             A    +     V+  + +++ +         + +L+NNAGIL   +  + + + ++ +
Sbjct: 80  -VADYNSVIDGAKVI--ETAIKAF-------GRVDILVNNAGILRDRSLVKTSEQDWNLV 129

Query: 174 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
              +  G+F  T+   P +K      RI+  +S
Sbjct: 130 NDVHLKGSFKCTQAAFPYMKKQNY-GRIIMTSS 161

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL---------VGRSSHLLSETMADITSRNKDAR 115
           V +VTGA  GLG A A A +  G  VV+         VG+ S    + + +I  R   A 
Sbjct: 11  VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA- 69

Query: 116 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQM 173
             A    + + + +   K +L  +         I +++NNAGIL   + SR++ E +D +
Sbjct: 70  -VANYDSVEAGEKL--VKTALDTF-------GRIDVVVNNAGILRDRSFSRISDEDWDII 119

Query: 174 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 206
              +  G+F +T+     +K      RI+   S
Sbjct: 120 QRVHLRGSFQVTRAAWDHMKKQNY-GRIIMTAS 151

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 52.6 bits (126), Expect = 6e-08
 Identities = 19/99 (19%), Positives = 28/99 (28%), Gaps = 16/99 (16%)

Query: 59  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 118
             +K    +V   T  +G  +A  L+ EG  VVL GR           +  R K     A
Sbjct: 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA 174

Query: 119 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 157
              D +S    +K                    +     
Sbjct: 175 ETADDASRAEAVK----------------GAHFVFTAGA 197

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 6e-05
 Identities = 48/297 (16%), Positives = 94/297 (31%), Gaps = 79/297 (26%)

Query: 3   LVMKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIK 62
            V++ L+ +++ +      R      + L     Q   + L   KS PY+ C+  +  + 
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL--KSKPYENCL--L--VL 250

Query: 63  RPV------------C--IVT----GATSGLGAAAAYALSREGFHVVLVGRSSHL-LSET 103
             V            C  ++T      T  L AA          H+ L   S  L   E 
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT-------HISLDHHSMTLTPDEV 303

Query: 104 M---ADITS-RNKDARLEAFQVD---LSSFQSVLK-FKDSLQQWL-LDSD-MHSSIQLLI 153
                     R +D   E    +   LS     ++    +   W  ++ D + + I+  +
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363

Query: 154 NNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV--TSFTHRN 211
           N          L P  Y +M    +     +     P   ++ +P+ ++++        +
Sbjct: 364 NV---------LEPAEYRKM----FD-RLSV----FP--PSAHIPTILLSLIWFDVIKSD 403

Query: 212 VFNAQVNNETITGKFFLRS--KCYPCARIYEYSKLCLLIF-----SYELHRNLGLDK 261
           V         +  K    S  +  P         + L +       Y LHR++ +D 
Sbjct: 404 V-------MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI-VDH 452

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 15/131 (11%)

Query: 67   IVTGATSGLGAAAAYALSREGF-HVVLVGRS---SHLLSETMADITSRNKDARLEAFQVD 122
            ++TG   G G   A  L   G   +VL  RS   +   +  + +   +    ++     +
Sbjct: 1888 VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSN 1945

Query: 123  LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 180
             SS        D  +  + ++     +  + N A +L  A     TPE +  +    Y G
Sbjct: 1946 ASS-------LDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSG 1998

Query: 181  AFFLTKLLLPL 191
               L ++    
Sbjct: 1999 TANLDRVTREA 2009

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	369
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.92
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.91
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.91
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.91
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.91
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.91
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.9
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.9
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.9
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.89
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.88
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.88
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.88
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.88
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.87
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.87
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.87
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.87
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.87
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.87
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.87
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.87
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.87
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.86
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.86
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.86
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.86
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.86
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.86
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.86
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.86
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.86
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.86
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.85
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.85
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.85
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.85
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.85
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.85
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.84
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.84
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.83
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.83
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.83
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.83
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.82
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.82
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.81
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.81
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.81
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.81
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.8
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.79
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.79
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.78
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.78
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.77
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.76
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.76
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.76
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.74
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.74
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.7
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.69
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.68
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.68
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.67
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.66
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.66
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.66
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.64
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.58
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.58
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.56
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.56
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.56
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.47
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.31
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.04
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.02
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.83
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.79
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.74
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.71
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.64
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.62
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.62
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.61
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.57
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.53
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.52
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.51
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.42
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.37
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.37
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.3
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.3
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.27
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.26
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.26
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.25
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.24
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.22
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.22
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.19
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.17
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.17
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.12
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.11
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.1
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.09
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.08
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.04
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.02
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.99
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.96
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.92
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.91
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.9
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.86
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.84
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.8
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.8
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.8
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.78
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.75
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.75
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.7
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.7
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.69
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.69
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.68
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.67
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.64
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.62
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.59
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.58
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.51
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.49
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.47
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.43
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.37
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.36
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.33
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.33
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.32
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.32
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.31
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.29
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.29
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.27
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.21
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.2
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.19
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.18
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.17
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.16
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.12
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.12
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.11
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.11
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.11
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.11
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.1
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.1
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.02
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.01
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.0
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.99
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.98
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.95
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.92
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.9
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.9
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.89
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.89
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.88
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.84
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.83
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.82
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.82
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.79
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.78
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.78
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.72
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.72
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.69
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.69
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.65
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.63
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.62
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.61
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.61
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.6
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.59
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.58
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.57
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.55
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.54
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.49
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.47
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.43
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.41
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.4
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.38
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.35
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.35
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.29
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.28
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.28
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.25
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.22
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.22
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.18
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.18
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.13
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.12
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.11
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.04
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.99
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.98
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.98
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.98
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.96
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.96
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.94
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.93
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.87
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.84
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.82
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.81
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.75
1lnq_A	336	MTHK channels, potassium channel related protein;	95.75
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.71
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.68
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.64
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.63
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	95.61
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.49
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.46
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.43
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.41
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.41
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.28
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.25
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.21
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.15
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.12
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.11
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.1
3lpm_A	259	Putative methyltransferase; structural genomics, p	95.1
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	94.98
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	94.97
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.95
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	94.94
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.93
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	94.84
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	94.83
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	94.72
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	94.71
2nvu_B	805	Maltose binding protein/NEDD8-activating enzyme E1	94.7

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.6e-51  Score=366.67  Aligned_cols=243  Identities=25%  Similarity=0.302  Sum_probs=212.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++|+++++++++++.+ 
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~-   80 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFE-   80 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            689999999999999999999999999999999999999999999999776  56789999999999999999999999 


Q ss_pred             HhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           ++++||+||||||+..   +..++++++|++++++|+.|+|+++|+++|+|++++ .|+|||+||.++.      
T Consensus        81 -----~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~------  148 (254)
T 4fn4_A           81 -----TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGI------  148 (254)
T ss_dssp             -----HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------
T ss_pred             -----HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhc------
Confidence                 5689999999999753   456889999999999999999999999999999877 7999999999998      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHH-HHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLS-LMAFT  293 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--~~~-~~~~~  293 (369)
                                    .+.++..+|++||+|+.+|+|+|+.|++   ++|||||+|+||+|+|+|......  ... .....
T Consensus       149 --------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~  211 (254)
T 4fn4_A          149 --------------RGGFAGAPYTVAKHGLIGLTRSIAAHYG---DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTK  211 (254)
T ss_dssp             --------------CSSSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHH
T ss_pred             --------------CCCCCChHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHh
Confidence                          7788899999999999999999999998   899999999999999999765422  111 12222


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      ...|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..+
T Consensus       212 ~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          212 LMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             HHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCccc
Confidence            334678999999999999954432 12568999999998653

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=6.8e-51  Score=365.04  Aligned_cols=244  Identities=19%  Similarity=0.247  Sum_probs=215.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++..+++|++|+++++++++++.+
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999999876  46789999999999999999999999


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            ++++||+||||||+.  .+..++++++|++++++|+.|+|+++|+++|+|.++++.|+||++||.++.      
T Consensus        83 ------~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~------  150 (255)
T 4g81_D           83 ------EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ------  150 (255)
T ss_dssp             ------TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------
T ss_pred             ------HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc------
Confidence                  789999999999986  455688999999999999999999999999999765446999999999998      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~  295 (369)
                                    .+.+...+|++||+|+.+|+|+|+.|++   +.|||||+|+||+|+|+|.+........ ......
T Consensus       151 --------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~  213 (255)
T 4g81_D          151 --------------AARPTVAPYTAAKGGIKMLTCSMAAEWA---QFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSS  213 (255)
T ss_dssp             --------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHH
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhC
Confidence                          7888999999999999999999999998   8999999999999999998765433222 234455


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      .|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..
T Consensus       214 ~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          214 TPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             STTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCCeE
Confidence            7899999999999999954432 1257899999998854

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.2e-48  Score=353.55  Aligned_cols=237  Identities=25%  Similarity=0.326  Sum_probs=202.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++..+++|++|+++++++++++.+ 
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~-   99 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKA-   99 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHH-
Confidence            388999999999999999999999999999999999999998888777     56788999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ++++||+||||||+.  .+..++++++|++++++|+.|+|+++|+++|+|++   .|+||++||.++.       
T Consensus       100 -----~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~-------  164 (273)
T 4fgs_A          100 -----EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGS-------  164 (273)
T ss_dssp             -----HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGG-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhc-------
Confidence                 568999999999986  46678999999999999999999999999999975   4899999999998       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH------HHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF------LSLMA  291 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~------~~~~~  291 (369)
                                   .+.+...+|++||+|+.+|+|+|+.|++   +.|||||+|+||+|+|++..+....      .....
T Consensus       165 -------------~~~~~~~~Y~asKaav~~ltr~lA~Ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~  228 (273)
T 4fgs_A          165 -------------TGTPAFSVYAASKAALRSFARNWILDLK---DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNA  228 (273)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSCEEEEEEEECSBCC---------CHHHHHHHHHH
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHH
Confidence                         7888999999999999999999999998   8999999999999999987664321      11123


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .....|++|+.+|||+|+.+++++... ...+|+.+.+|+|..
T Consensus       229 ~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          229 LAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             HHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcChh
Confidence            444568999999999999999544321 256899999998854

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=5.1e-49  Score=348.93  Aligned_cols=228  Identities=20%  Similarity=0.257  Sum_probs=196.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++.        .+.++..+++|++|+++++++++      
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~------   74 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFE------   74 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHH------
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHH------
Confidence            5899999999999999999999999999999999998765431        24578999999999999988765      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                          ++++||+||||||+..+..+++.++|++++++|+.|+|+++|+++|+|++++  |+||||||.++.          
T Consensus        75 ----~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~----------  138 (242)
T 4b79_A           75 ----ALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYST----------  138 (242)
T ss_dssp             ----HCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGT----------
T ss_pred             ----hcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeecccc----------
Confidence                3689999999999988888899999999999999999999999999998754  999999999998          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHHHHHhh
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLKLLG  299 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~  299 (369)
                                .+.++..+|++||+|+.+|+|+|+.|++   ++|||||+|+||+|+|||.+..... ..........|++
T Consensus       139 ----------~~~~~~~~Y~asKaav~~ltr~lA~Ela---~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg  205 (242)
T 4b79_A          139 ----------FGSADRPAYSASKGAIVQLTRSLACEYA---AERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA  205 (242)
T ss_dssp             ----------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC
T ss_pred             ----------CCCCCCHHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC
Confidence                      7888899999999999999999999998   8999999999999999998775432 2233344557899


Q ss_pred             CCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017580          300 LLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  333 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~~g~~  333 (369)
                      |+.+|+|+|+.++  ||+++   ..+|+.+.+|+|..
T Consensus       206 R~g~peeiA~~v~--fLaSd~a~~iTG~~l~VDGG~l  240 (242)
T 4b79_A          206 RWGEAPEVASAAA--FLCGPGASFVTGAVLAVDGGYL  240 (242)
T ss_dssp             SCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHH--HHhCchhcCccCceEEECccHh
Confidence            9999999999999  55555   56899999998864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1e-48  Score=347.76  Aligned_cols=235  Identities=22%  Similarity=0.248  Sum_probs=202.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+.+  +++.+++.+.  +.++..+++|++|++++++++     
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~-----   75 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSF-----   75 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSS-----
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHH-----
Confidence            4689999999999999999999999999999999999865  4556666655  567899999999999876644     


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .+++||+||||||+.  .+..++++++|++++++|+.|+|+++|+++|+|+++++.|+|||+||..+.      
T Consensus        76 ------~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~------  143 (247)
T 4hp8_A           76 ------TDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF------  143 (247)
T ss_dssp             ------TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------
T ss_pred             ------HhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC------
Confidence                  348899999999986  455688999999999999999999999999999876546999999999998      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~  295 (369)
                                    .+.++..+|++||+|+.+|+|+|+.|++   ++|||||+|+||+|+|+|.+...... ........
T Consensus       144 --------------~g~~~~~~Y~asKaav~~ltr~lA~Ela---~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~  206 (247)
T 4hp8_A          144 --------------QGGIRVPSYTAAKHGVAGLTKLLANEWA---AKGINVNAIAPGYIETNNTEALRADAARNKAILER  206 (247)
T ss_dssp             --------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTT
T ss_pred             --------------CCCCCChHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhC
Confidence                          7788899999999999999999999999   89999999999999999987654322 22334455


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~~g~~  333 (369)
                      .|++|+.+|||+|+.++  ||+++   ..+|+.+.+|+|..
T Consensus       207 ~PlgR~g~peeiA~~v~--fLaSd~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          207 IPAGRWGHSEDIAGAAV--FLSSAAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             CTTSSCBCTHHHHHHHH--HHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCcCHHHHHHHHH--HHhCchhcCCcCCeEEECcccc
Confidence            68999999999999999  55555   56899999998864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=9.2e-48  Score=346.11  Aligned_cols=240  Identities=22%  Similarity=0.227  Sum_probs=201.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++.+. .+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~-   79 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALAQR--QPRATYLPVELQDDAQCRDAVAQTIA-   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHHhc--CCCEEEEEeecCCHHHHHHHHHHHHH-
Confidence            6899999999999999999999999999999999999887543 4455555  45788999999999999999999998 


Q ss_pred             HhccCCCCCccEEEecccccc-CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          140 LLDSDMHSSIQLLINNAGILA-TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                           ++++||+||||||+.. ...+.+.++|++.+++|+.++++++|+++|+|++++  |+||++||.++.        
T Consensus        80 -----~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~--------  144 (258)
T 4gkb_A           80 -----TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAV--------  144 (258)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHH--------
T ss_pred             -----HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhc--------
Confidence                 5689999999999863 334789999999999999999999999999998764  999999999998        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-----HHHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-----LSLMAFT  293 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~  293 (369)
                                  .+.++..+|++||+|+.+|+|+|+.|++   +.|||||+|+||+|+|+|.++....     .......
T Consensus       145 ------------~~~~~~~~Y~asKaav~~ltr~lA~ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~  209 (258)
T 4gkb_A          145 ------------TGQGNTSGYCASKGAQLALTREWAVALR---EHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIA  209 (258)
T ss_dssp             ------------HCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCSCC-----------CHHHHHH
T ss_pred             ------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHH
Confidence                        7788899999999999999999999998   8999999999999999998764321     1112233


Q ss_pred             HHHHh-hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          294 VLKLL-GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~-~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ...|+ +|+.+|||+|+.+++++... ...+|+.+.+|+|..
T Consensus       210 ~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          210 AKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             hcCCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCcc
Confidence            33466 48999999999999544321 257899999999865

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.5e-47  Score=339.37  Aligned_cols=229  Identities=21%  Similarity=0.220  Sum_probs=200.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+||||||++|||+++|++|+++|++|++++|++++++++.++      ..++..+++|++|+++++++++++.+    
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~v~~~~~----   71 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE------RPNLFYFHGDVADPLTLKKFVEYAME----   71 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT------CTTEEEEECCTTSHHHHHHHHHHHHH----
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------cCCEEEEEecCCCHHHHHHHHHHHHH----
Confidence            48999999999999999999999999999999998776654433      45789999999999999999999999    


Q ss_pred             cCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        ++++||+||||||+.  .+..+++.++|++++++|+.|+|+++|+++|+|++++  |+||++||..+.          
T Consensus        72 --~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IInisS~~~~----------  137 (247)
T 3ged_A           72 --KLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINIASTRAF----------  137 (247)
T ss_dssp             --HHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGT----------
T ss_pred             --HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEEeecccc----------
Confidence              568999999999986  4556889999999999999999999999999998765  999999999998          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhC
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  300 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  300 (369)
                                .+.+...+|++||+|+.+|+|+|+.|++   + +||||+|+||+|+|++.++.....     ....|++|
T Consensus       138 ----------~~~~~~~~Y~asKaal~~ltk~lA~ela---~-~IrVN~I~PG~i~t~~~~~~~~~~-----~~~~Pl~R  198 (247)
T 3ged_A          138 ----------QSEPDSEAYASAKGGIVALTHALAMSLG---P-DVLVNCIAPGWINVTEQQEFTQED-----CAAIPAGK  198 (247)
T ss_dssp             ----------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---T-TSEEEEEEECSBCCCC---CCHHH-----HHTSTTSS
T ss_pred             ----------cCCCCCHHHHHHHHHHHHHHHHHHHHHC---C-CCEEEEEecCcCCCCCcHHHHHHH-----HhcCCCCC
Confidence                      7888999999999999999999999997   5 899999999999999987654322     23468899


Q ss_pred             CCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          301 LQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      +.+|+|+|+++++++. ++..+|+.+.+|+|....
T Consensus       199 ~g~pediA~~v~fL~s-~~~iTG~~i~VDGG~s~r  232 (247)
T 3ged_A          199 VGTPKDISNMVLFLCQ-QDFITGETIIVDGGMSKR  232 (247)
T ss_dssp             CBCHHHHHHHHHHHHH-CSSCCSCEEEESTTGGGC
T ss_pred             CcCHHHHHHHHHHHHh-CCCCCCCeEEECcCHHHh
Confidence            9999999999998764 457899999999997653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.2e-45  Score=333.84  Aligned_cols=242  Identities=14%  Similarity=0.105  Sum_probs=210.1

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        59 ~~~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+++||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++++.+ +.++.++++|++++++++++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999875  99999999999999999999999999999888887654 557899999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                      .+      +++++|+||||||+..      +..+.+.++|+..+++|+.+++.+++.+.|.+++   .|+||++||.++.
T Consensus        81 ~~------~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~  151 (256)
T 4fs3_A           81 GK------DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGE  151 (256)
T ss_dssp             HH------HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGT
T ss_pred             HH------HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEeccccc
Confidence            98      5689999999999752      2346788999999999999999999999988754   4899999999998


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-H
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-L  289 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~  289 (369)
                                          .+.++...|++||+|+.+|+|+|+.|++   ++|||||+|+||+|+|++.+....... .
T Consensus       152 --------------------~~~~~~~~Y~asKaal~~ltr~lA~Ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~  208 (256)
T 4fs3_A          152 --------------------FAVQNYNVMGVAKASLEANVKYLALDLG---PDNIRVNAISAGPIRTLSAKGVGGFNTIL  208 (256)
T ss_dssp             --------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCSGGGTTCTTHHHHH
T ss_pred             --------------------cCcccchhhHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecCCCCChhhhhccCCHHHH
Confidence                                7888999999999999999999999998   899999999999999999887654332 2


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      .......|++|+.+|||+|+.+++++.. +...+|+.+.+|+|..
T Consensus       209 ~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          209 KEIKERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             HHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHH
Confidence            3445567899999999999999954432 1256899999998864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=3.5e-46  Score=336.80  Aligned_cols=234  Identities=19%  Similarity=0.220  Sum_probs=196.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.++.            ..+...+++|++++++++++++++.
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~   73 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATR   73 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999986521            1233578999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +      +++++|+||||||+..    +..++++++|++.+++|+.|+++++|+++|+|++++ .|+||++||..+.   
T Consensus        74 ~------~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~---  143 (261)
T 4h15_A           74 Q------RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRV---  143 (261)
T ss_dssp             H------HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT---
T ss_pred             H------HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhc---
Confidence            8      6799999999999752    456789999999999999999999999999999876 7999999999987   


Q ss_pred             cccCCCcccccccccccCCCc-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH----
Q 017580          214 NAQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS----  288 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~----  288 (369)
                                       .+.+ +...|++||+|+.+|+++|+.|++   +.|||||+|+||+|+|++.........    
T Consensus       144 -----------------~~~~~~~~~Y~asKaal~~lt~~lA~Ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~  203 (261)
T 4h15_A          144 -----------------LPLPESTTAYAAAKAALSTYSKAMSKEVS---PKGVRVVRVSPGWIETEASVRLAERLAKQAG  203 (261)
T ss_dssp             -----------------SCCTTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCHHHHHHHHHHHHHTT
T ss_pred             -----------------cCCCCccHHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEeCCCcCCcchhhhhHHHHHhhc
Confidence                             5554 578999999999999999999998   899999999999999998765422110    


Q ss_pred             ---------HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          289 ---------LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       289 ---------~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                               ........|++|+.+|||+|+.+++++... ...+|+.+.+|+|..
T Consensus       204 ~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          204 TDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             CCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             cchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence                     011122357889999999999999554321 256899999998853

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=4.4e-44  Score=325.43  Aligned_cols=246  Identities=21%  Similarity=0.227  Sum_probs=213.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++....++.++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999988766666799999999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|++++ .|+||++||..+.      
T Consensus        84 ------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------  150 (265)
T 3lf2_A           84 ------TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLAS------  150 (265)
T ss_dssp             ------HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGT------
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccC------
Confidence                  458899999999986  3456889999999999999999999999999998876 7999999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--------HHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--------FLS  288 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--------~~~  288 (369)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....        ...
T Consensus       151 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  213 (265)
T 3lf2_A          151 --------------QPEPHMVATSAARAGVKNLVRSMAFEFA---PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQ  213 (265)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHTC------CHHH
T ss_pred             --------------CCCCCchhhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHH
Confidence                          7778899999999999999999999998   789999999999999998765321        111


Q ss_pred             HHHHHHH---HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          289 LMAFTVL---KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       289 ~~~~~~~---~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .......   .|++|+.+|+|+|+++++++... ...+|+.+..++|...
T Consensus       214 ~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          214 WTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHHHHhhccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCcC
Confidence            1112222   57789999999999999655432 3678999999988754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3.9e-44  Score=324.09  Aligned_cols=245  Identities=21%  Similarity=0.225  Sum_probs=212.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999998888765  56789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccccCC-CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                            .++++|+||||||+..+. .+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        86 ------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  151 (256)
T 3gaf_A           86 ------QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGE-------  151 (256)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT-------
T ss_pred             ------HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHc-------
Confidence                  458899999999987432 2789999999999999999999999999998876 7899999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||+|+++++++++.|++   +.||+||+|+||+|+|++.+...............|
T Consensus       152 -------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p  215 (256)
T 3gaf_A          152 -------------NTNVRMASYGSSKAAVNHLTRNIAFDVG---PMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTP  215 (256)
T ss_dssp             -------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCT
T ss_pred             -------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCC
Confidence                         7778889999999999999999999998   789999999999999999765432222223334457


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       216 ~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          216 LGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcccc
Confidence            788999999999999765432 35689999999987653

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=4.6e-43  Score=317.43  Aligned_cols=246  Identities=18%  Similarity=0.233  Sum_probs=212.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.+.++++.+++.+.  +.++.++.+|++|+++++++++++.+  
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~--   78 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDE--   78 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            58999999999999999999999999999997 89999898888888664  56799999999999999999999998  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|+||||||+.  .+..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.        
T Consensus        79 ----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~--------  145 (258)
T 3oid_A           79 ----TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSI--------  145 (258)
T ss_dssp             ----HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGT--------
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhC--------
Confidence                458899999999975  3455789999999999999999999999999999876 7899999999988        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKL  297 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~  297 (369)
                                  .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....... ........|
T Consensus       146 ------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  210 (258)
T 3oid_A          146 ------------RYLENYTTVGVSKAALEALTRYLAVELS---PKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP  210 (258)
T ss_dssp             ------------SBCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT
T ss_pred             ------------CCCCCcHHHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC
Confidence                        6778889999999999999999999998   789999999999999999887643322 223334457


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSAL  339 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~  339 (369)
                      ++++.+|+|+|+++++++... ...+|+.+..++|.....+..
T Consensus       211 ~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~  253 (258)
T 3oid_A          211 AGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLVLEH  253 (258)
T ss_dssp             TSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGGBCC--
T ss_pred             CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccCCCCCC
Confidence            789999999999999654432 257899999999988765543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=9.2e-44  Score=319.96  Aligned_cols=241  Identities=21%  Similarity=0.278  Sum_probs=208.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888887776     56789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++..|+||++||..+.      
T Consensus        77 ------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------  144 (247)
T 3rwb_A           77 ------LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFF------  144 (247)
T ss_dssp             ------HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH------
T ss_pred             ------HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhc------
Confidence                  4588999999999863  34578999999999999999999999999999876545899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..+............
T Consensus       145 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  207 (247)
T 3rwb_A          145 --------------AGTPNMAAYVAAKGGVIGFTRALATELG---KYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQ  207 (247)
T ss_dssp             --------------HTCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHS
T ss_pred             --------------cCCCCchhhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcCcCccccccChhHHHHHHhccc
Confidence                          6778889999999999999999999998   78999999999999999987654433222222335


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      +++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       208 ~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          208 AMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             ccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            6778899999999999655433 257899999998854

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-43  Score=319.22  Aligned_cols=249  Identities=22%  Similarity=0.272  Sum_probs=213.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ++.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+ ..++.++++|++|+++++++++++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3557899999999999999999999999999999999999999999998887653 358999999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|+||||||+.  .+..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||..+.    
T Consensus        83 ~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~----  151 (262)
T 3pk0_A           83 VE------EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGP----  151 (262)
T ss_dssp             HH------HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTT----
T ss_pred             HH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhc----
Confidence            98      458899999999986  3456789999999999999999999999999998876 6899999998874    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                     ..+.++...|++||++++.++++++.|++   +.||+||+|+||+|+|++........ ......
T Consensus       152 ---------------~~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~  212 (262)
T 3pk0_A          152 ---------------ITGYPGWSHYGATKAAQLGFMRTAAIELA---PHKITVNAIMPGNIMTEGLLENGEEY-IASMAR  212 (262)
T ss_dssp             ---------------TBCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCHHHHTTCHHH-HHHHHT
T ss_pred             ---------------cCCCCCChhhHHHHHHHHHHHHHHHHHHH---hhCcEEEEEEeCcCcCccccccCHHH-HHHHHh
Confidence                           14567788999999999999999999998   78999999999999999876543321 222333


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  336 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~  336 (369)
                      ..|++++.+|+|+|+.+++++... ...+|+.+..++|.....
T Consensus       213 ~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~  255 (262)
T 3pk0_A          213 SIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLPE  255 (262)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCCS
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeecCc
Confidence            456788999999999999665432 357899999999987753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.6e-43  Score=318.63  Aligned_cols=240  Identities=22%  Similarity=0.273  Sum_probs=207.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.     .+...+++|++|+++++++++++.
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999998888877773     356889999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.     
T Consensus        79 ~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~-----  146 (248)
T 3op4_A           79 D------EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGT-----  146 (248)
T ss_dssp             H------HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH-----
T ss_pred             H------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhc-----
Confidence            8      5588999999999874  345779999999999999999999999999998766 6899999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||+|+++++++++.|++   +.||+||+|+||+|+|++.+...... .......
T Consensus       147 ---------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~  207 (248)
T 3op4_A          147 ---------------MGNAGQANYAAAKAGVIGFTKSMAREVA---SRGVTVNTVAPGFIETDMTKALNDEQ-RTATLAQ  207 (248)
T ss_dssp             ---------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSTTTTTSCHHH-HHHHHHT
T ss_pred             ---------------CCCCCChHHHHHHHHHHHHHHHHHHHHH---HhCeEEEEEeeCCCCCchhhhcCHHH-HHHHHhc
Confidence                           6778889999999999999999999998   78999999999999999987654332 2223334


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .|.+++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       208 ~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          208 VPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCee
Confidence            56788999999999999655432 356899999998864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=2.9e-43  Score=324.22  Aligned_cols=255  Identities=22%  Similarity=0.261  Sum_probs=217.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+ ..++.++++|++|+++++++++++
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHH
Confidence            3557899999999999999999999999999999999999999999998887653 357999999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|+||||||+..  +..+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||..+..   
T Consensus       114 ~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~---  183 (293)
T 3rih_A          114 VD------AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPV---  183 (293)
T ss_dssp             HH------HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTT---
T ss_pred             HH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhcc---
Confidence            98      5588999999999863  455789999999999999999999999999998776 68999999988741   


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.++...|++||++++.|+++++.|++   +.||+||+|+||+|+|++.+...... ......
T Consensus       184 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~~~  243 (293)
T 3rih_A          184 ----------------TGYPGWSHYGASKAAQLGFMRTAAIELA---PRGVTVNAILPGNILTEGLVDMGEEY-ISGMAR  243 (293)
T ss_dssp             ----------------BBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCHHHHHTCHHH-HHHHHT
T ss_pred             ----------------CCCCCCHHHHHHHHHHHHHHHHHHHHHh---hhCeEEEEEecCCCcCcchhhccHHH-HHHHHh
Confidence                            4567788999999999999999999998   78999999999999999876543221 122233


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFN  342 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~~~d  342 (369)
                      ..|++++.+|+|+|+.+++++... ...+|+.+.+++|.....+....|
T Consensus       244 ~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~~~~~~  292 (293)
T 3rih_A          244 SIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLPESPDAVN  292 (293)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCBSSGGGSC
T ss_pred             cCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccCCCCCCCCC
Confidence            456788999999999999665432 357899999999998876665544

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.2e-43  Score=322.66  Aligned_cols=248  Identities=21%  Similarity=0.242  Sum_probs=212.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|+++++++++++
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999999999999888887633 567999999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|.|++++..|+||++||.++.    
T Consensus        93 ~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----  162 (266)
T 4egf_A           93 AE------AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL----  162 (266)
T ss_dssp             HH------HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----
T ss_pred             HH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc----
Confidence            98      5588999999999874  34578899999999999999999999999999876545899999999988    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFT  293 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~  293 (369)
                                      .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.... ........
T Consensus       163 ----------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  223 (266)
T 4egf_A          163 ----------------APLPDHYAYCTSKAGLVMATKVLARELG---PHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMI  223 (266)
T ss_dssp             ----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHH
T ss_pred             ----------------cCCCCChHHHHHHHHHHHHHHHHHHHHh---hhCeEEEEEEeCCCcCchhhhhccChHHHHHHH
Confidence                            7778889999999999999999999998   789999999999999999765421 11122233


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ...|++++.+|+|+|+++++++... ...+|+.+.+++|...
T Consensus       224 ~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          224 ARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            3457788999999999999665432 3678999999988653

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.4e-43  Score=321.47  Aligned_cols=244  Identities=17%  Similarity=0.225  Sum_probs=212.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999999888765  45789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||..+.      
T Consensus       100 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~------  166 (271)
T 4ibo_A          100 ------QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSE------  166 (271)
T ss_dssp             ------HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------
T ss_pred             ------HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhC------
Confidence                  6789999999999863  445789999999999999999999999999998776 6899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~  295 (369)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..... .........
T Consensus       167 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  229 (271)
T 4ibo_A          167 --------------LARATVAPYTVAKGGIKMLTRAMAAEWA---QYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKAR  229 (271)
T ss_dssp             --------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHH
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHHHh---hhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhc
Confidence                          7778889999999999999999999998   7899999999999999998764321 122223344


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       230 ~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          230 TPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             STTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence            57889999999999999655432 3578999999998754

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.2e-43  Score=322.59  Aligned_cols=261  Identities=16%  Similarity=0.177  Sum_probs=218.9

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++++|++|+++++++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHH
Confidence            4679999999999  99999999999999999999999986 5555666655432  37889999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      +      .++++|+||||||+..      +..+.+.+++++++++|+.|+++++++++|.|++   .|+||++||.++. 
T Consensus        80 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~-  149 (275)
T 2pd4_A           80 K------DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGST-  149 (275)
T ss_dssp             H------HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT-
T ss_pred             H------HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhc-
Confidence            8      5689999999999864      3447889999999999999999999999999974   4899999998887 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~  290 (369)
                                         .+.++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+........ .
T Consensus       150 -------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  207 (275)
T 2pd4_A          150 -------------------KYMAHYNVMGLAKAALESAVRYLAVDLG---KHHIRVNALSAGPIRTLASSGIADFRMILK  207 (275)
T ss_dssp             -------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCTTGGGSTTHHHHHH
T ss_pred             -------------------CCCCCchhhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCccccchhhhccccHHHHH
Confidence                               6677888999999999999999999998   7899999999999999997764322111 1


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc-cCCcccCCHHHHHHHHHHHHH
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV-NSSALSFNSKLAGELWTTSCN  355 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~-~~~~~~~d~~~~~~lw~~~~~  355 (369)
                      ......|++++.+|+|+|+.+++++... ...+|+++..++|... ..+....|++.+++||+.+++
T Consensus       208 ~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          208 WNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             HHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence            1222346778899999999999766432 3568999988888764 456777899999999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=6.3e-43  Score=315.96  Aligned_cols=242  Identities=23%  Similarity=0.298  Sum_probs=209.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888877776     45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+.  .+..+.+.++|++.+++|+.|+++++++++|.|++   .|+||++||.++.      
T Consensus        79 ------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~------  143 (255)
T 4eso_A           79 ------TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADE------  143 (255)
T ss_dssp             ------HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGS------
T ss_pred             ------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhc------
Confidence                  458899999999986  34457899999999999999999999999999965   3899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHHH---HHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLS---LMA  291 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--~~~~~---~~~  291 (369)
                                    .+.++...|++||+|+++++++++.|++   +.||+||+|+||+|+|++.+..  .....   ...
T Consensus       144 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  206 (255)
T 4eso_A          144 --------------GGHPGMSVYSASKAALVSFASVLAAELL---PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTL  206 (255)
T ss_dssp             --------------SBCTTBHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHH
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEecCcccCcccccccCChhhHHHHHHH
Confidence                          7778889999999999999999999998   7899999999999999987542  11111   112


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCC
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSS  337 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~  337 (369)
                      .....|++|+.+|+|+|+++++++..+...+|+.+..++|......
T Consensus       207 ~~~~~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          207 GDNITPMKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             HHHHSTTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred             HhccCCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence            2334578899999999999998776555778999999999876543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.4e-43  Score=321.15  Aligned_cols=251  Identities=25%  Similarity=0.305  Sum_probs=211.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999998888654  56789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                            .++++|+||||||+.   .+..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+.     
T Consensus        82 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-----  149 (280)
T 3tox_A           82 ------RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGH-----  149 (280)
T ss_dssp             ------HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTT-----
T ss_pred             ------HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhC-----
Confidence                  558899999999976   3445789999999999999999999999999999876 7899999998876     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chh--HHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPS--FLSLMAF  292 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~--~~~~~~~  292 (369)
                                    ..+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++... .+.  .......
T Consensus       150 --------------~~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~  212 (280)
T 3tox_A          150 --------------TAGFAGVAPYAASKAGLIGLVQALAVELG---ARGIRVNALLPGGTDTPANFANLPGAAPETRGFV  212 (280)
T ss_dssp             --------------TBCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHH
T ss_pred             --------------cCCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEECCCCCchhhhhccccCHHHHHHH
Confidence                          13567788999999999999999999998   889999999999999998765 211  1111222


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALS  340 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~~  340 (369)
                      ....|++++.+|+|+|+++++++... ...+|+.+..++|.........
T Consensus       213 ~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~~a~~  261 (280)
T 3tox_A          213 EGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTKAAEN  261 (280)
T ss_dssp             HTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC----
T ss_pred             hccCccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccccccc
Confidence            23356778899999999999766443 3678999999999887544433

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=7.9e-43  Score=321.44  Aligned_cols=271  Identities=30%  Similarity=0.406  Sum_probs=213.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ++.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++|++++++++++ 
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~-   83 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADG-   83 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHT-
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHh-
Confidence            345688999999999999999999999999999999999998887766554     56899999999999999888774 


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                               .+++|+||||||+..+..+.+.+++++++++|+.|+++++++++|.|.+     |||++||.++...... 
T Consensus        84 ---------~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~~~~~~~~~-  148 (291)
T 3rd5_A           84 ---------VSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSMAHWPGRIN-  148 (291)
T ss_dssp             ---------CCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCGGGTTCCCC-
T ss_pred             ---------cCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeechhhccCCCC-
Confidence                     3679999999999877777889999999999999999999999999863     9999999988743211 


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCC--eEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH--VSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                      ..+...      ...++++...|++||+|++.+++++++|++   +.+  |+|++|+||+|+|++.+.......  ....
T Consensus       149 ~~~~~~------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~g~~i~v~~v~PG~v~T~~~~~~~~~~~--~~~~  217 (291)
T 3rd5_A          149 LEDLNW------RSRRYSPWLAYSQSKLANLLFTSELQRRLT---AAGSPLRALAAHPGYSHTNLQGASGRKLG--DALM  217 (291)
T ss_dssp             SSCTTC------SSSCCCHHHHHHHHHHHHHHHHHHHHHHHH---HTTCCCEEEEECCSGGGSCC---------------
T ss_pred             cccccc------cccCCCCcchHHHHHHHHHHHHHHHHHHHh---hCCCCEEEEEeeCCCCccccccccchHHH--HHHH
Confidence            111100      124567889999999999999999999997   555  999999999999999877533221  1112


Q ss_pred             HHHhhCCC-CHHHHHHHHHHHhcCCCCCcccEEeCCCCcc-----ccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          295 LKLLGLLQ-SPEKGINSVLDAALAPPETSGVYFFGGKGRT-----VNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       295 ~~~~~~~~-~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~-----~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      ..+.+++. +|+|+|+++++++.. +..+|+++..++|..     ...+....|++.+++||+.++++++..
T Consensus       218 ~~~~~~~~~~~~~~A~~~~~l~~~-~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~  288 (291)
T 3rd5_A          218 SAATRVVATDADFGARQTLYAASQ-DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTE  288 (291)
T ss_dssp             -------CHHHHHHHHHHHHHHHS-CCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHcC-CCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHccc
Confidence            23344443 599999999988776 578999999887654     345678899999999999999999753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=4.1e-43  Score=319.77  Aligned_cols=243  Identities=25%  Similarity=0.318  Sum_probs=210.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.  +.++..+.+|++|+++++++++++.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999998888766  45788999999999999999999998


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus       102 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------  168 (270)
T 3ftp_A          102 ------EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGS------  168 (270)
T ss_dssp             ------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhC------
Confidence                  4588999999999863  456789999999999999999999999999998765 6999999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..+... ........
T Consensus       169 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~  230 (270)
T 3ftp_A          169 --------------AGNPGQVNYAAAKAGVAGMTRALAREIG---SRGITVNCVAPGFIDTDMTKGLPQEQ-QTALKTQI  230 (270)
T ss_dssp             --------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSHHHHHSCHHH-HHHHHTTC
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHHHh---hhCeEEEEEEeCCCcCcchhhcCHHH-HHHHHhcC
Confidence                          6778889999999999999999999998   78999999999999999987654332 12223335


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      |++++.+|+|+|+++++++... ...+|+.+.+++|...
T Consensus       231 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          231 PLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence            6778899999999999765432 3568999999988653

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1e-42  Score=316.30  Aligned_cols=242  Identities=21%  Similarity=0.221  Sum_probs=209.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~-   84 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMK-   84 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999999999888765  56789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .++++|+||||||+.   .+..+.+.++|++++++|+.++++++++++|.|++++  |+||++||..+.      
T Consensus        85 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~------  151 (264)
T 3ucx_A           85 -----AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVR------  151 (264)
T ss_dssp             -----HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGG------
T ss_pred             -----HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhc------
Confidence                 668999999999985   3445789999999999999999999999999998765  899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----------
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----------  286 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~----------  286 (369)
                                    .+.++...|++||+|+++++++++.|++   +.||+||+|+||+|+|++.+.....          
T Consensus       152 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  214 (264)
T 3ucx_A          152 --------------HSQAKYGAYKMAKSALLAMSQTLATELG---EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVE  214 (264)
T ss_dssp             --------------CCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHH
T ss_pred             --------------cCCCccHHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecCccccccHHHHHHhhhhhcCCCHH
Confidence                          7778889999999999999999999998   8899999999999999997654221          


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ..........|++++.+|+|+|+++++++... ...+|+.+..++|...
T Consensus       215 ~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          215 DIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            11111222346678999999999999665432 3578999999988753

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.2e-42  Score=314.79  Aligned_cols=242  Identities=19%  Similarity=0.216  Sum_probs=206.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888887776     45689999999999999999999998


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|.+++..|+||++||.++.      
T Consensus        79 ------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------  146 (259)
T 4e6p_A           79 ------HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR------  146 (259)
T ss_dssp             ------HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc------
Confidence                  6789999999999863  44578999999999999999999999999999876445899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------H
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------F  286 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~  286 (369)
                                    .+.++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+....          .
T Consensus       147 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  209 (259)
T 4e6p_A          147 --------------RGEALVAIYCATKAAVISLTQSAGLDLI---KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRG  209 (259)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTT
T ss_pred             --------------cCCCCChHHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEEECCCccchhhhhhhhhhhhccCChH
Confidence                          7778889999999999999999999998   789999999999999998765411          1


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ..........|++++.+|+|+|+++++++... ...+|+.+..++|...
T Consensus       210 ~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          210 EKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             HHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhc
Confidence            11122333457788999999999999543322 2567999999988653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.2e-42  Score=316.88  Aligned_cols=247  Identities=16%  Similarity=0.213  Sum_probs=212.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+. ..++.++.+|++|+++++++++++.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999999876542 2378999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      +      .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|.|.+++ .|+||++||.++.    
T Consensus        87 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~----  155 (281)
T 3svt_A           87 A------WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAAS----  155 (281)
T ss_dssp             H------HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHH----
T ss_pred             H------HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHc----
Confidence            8      458899999999984   3455789999999999999999999999999998876 7899999999988    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFT  293 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~  293 (369)
                                      .+.++...|++||++++.++++++.|++   +.+|+||+|+||+|+|++.+..... .......
T Consensus       156 ----------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~  216 (281)
T 3svt_A          156 ----------------NTHRWFGAYGVTKSAVDHLMQLAADELG---ASWVRVNSIRPGLIRTDLVAAITESAELSSDYA  216 (281)
T ss_dssp             ----------------SCCTTCTHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHH
T ss_pred             ----------------CCCCCChhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCcCcCcchhhcccCHHHHHHHH
Confidence                            6777888999999999999999999998   7899999999999999998754221 1122233


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ...|++++.+|+|+|+++++++... ...+|+.+..++|....
T Consensus       217 ~~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          217 MCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             HHCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             hcCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcc
Confidence            4457788999999999999665432 35689999999998875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-43  Score=322.42  Aligned_cols=247  Identities=24%  Similarity=0.298  Sum_probs=205.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            455678999999999999999999999999999999999999999998888654  567899999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      .+      .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++... 
T Consensus       100 ~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~-  171 (283)
T 3v8b_A          100 VL------KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRT-  171 (283)
T ss_dssp             HH------HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTB-
T ss_pred             HH------HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccC-
Confidence            98      558899999999985   4566889999999999999999999999999998776 689999999988711 


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH---
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM---  290 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~---  290 (369)
                                       .+.++...|++||+|+++++++++.|++   +.||+||+|+||+|+|++.+.........   
T Consensus       172 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  231 (283)
T 3v8b_A          172 -----------------FTTPGATAYTATKAAQVAIVQQLALELG---KHHIRVNAVCPGAIETNISDNTKLRHEEETAI  231 (283)
T ss_dssp             -----------------CCSTTCHHHHHHHHHHHHHHHHHHHHTT---TTTEEEEEEEECSBSSCTTCCTTBCCHHHHSC
T ss_pred             -----------------CCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCcEEEEEEeCCCcCCcccccccccchhhhh
Confidence                             2667888999999999999999999998   88999999999999999986542111100   


Q ss_pred             ---HHHHHHHh--hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          291 ---AFTVLKLL--GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       291 ---~~~~~~~~--~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                         ......|+  +++.+|+|+|+++++++... ...+|+.+.+++|..
T Consensus       232 ~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          232 PVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             CCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             hhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCcc
Confidence               00111244  78889999999999554322 356899999998864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=8.5e-43  Score=316.96  Aligned_cols=241  Identities=24%  Similarity=0.298  Sum_probs=201.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ++.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++|+++++++++++
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999998888876665     567999999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|.|++++ .|+||++||.++.    
T Consensus        96 ~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~----  164 (266)
T 3grp_A           96 ER------EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGV----  164 (266)
T ss_dssp             HH------HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------
T ss_pred             HH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHc----
Confidence            98      4588999999999863  445778999999999999999999999999998765 6899999999988    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.++...|++||+|++.++++++.|++   +.||+||+|+||+|+|++.+...... ......
T Consensus       165 ----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~~~  224 (266)
T 3grp_A          165 ----------------VGNPGQTNYCAAKAGLIGFSKALAQEIA---SRNITVNCIAPGFIKSAMTDKLNEKQ-KEAIMA  224 (266)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSHHHHTCCHHH-HHHHHT
T ss_pred             ----------------CCCCCchhHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEeeCcCCCchhhccCHHH-HHHHHh
Confidence                            6778889999999999999999999998   78999999999999999987654322 222333


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ..|++++.+|+|+|+++++++... ...+|+.+.+++|..
T Consensus       225 ~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          225 MIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            457788999999999999655432 356899999998864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2e-42  Score=316.33  Aligned_cols=242  Identities=21%  Similarity=0.316  Sum_probs=206.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKTTA   97 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888877765     56789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+.  .+..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus        98 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------  164 (277)
T 4dqx_A           98 ------KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTAT------  164 (277)
T ss_dssp             ------HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhC------
Confidence                  458899999999986  3456789999999999999999999999999998876 7899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hH-HHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SF-LSLMA  291 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----~~-~~~~~  291 (369)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.....    .. .....
T Consensus       165 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  227 (277)
T 4dqx_A          165 --------------SAIADRTAYVASKGAISSLTRAMAMDHA---KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSD  227 (277)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHH
T ss_pred             --------------cCCCCChhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcCcCchhhhhcccccchhHHHHH
Confidence                          7778889999999999999999999998   78999999999999999843321    11 11111


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      .....+++++.+|+|+|+++++++... ...+|+.+..++|....
T Consensus       228 ~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          228 FNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            233346778899999999999765433 35689999999987653

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-42  Score=315.91  Aligned_cols=239  Identities=23%  Similarity=0.274  Sum_probs=205.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++|+++++++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999988888776     45788999999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccccC----CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                            .++++|+||||||+..+    ..+.+.+.|++++++|+.|+++++++++|.|++++ .|+||++||..+.    
T Consensus        82 ------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~----  150 (271)
T 3tzq_B           82 ------TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAH----  150 (271)
T ss_dssp             ------HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT----
T ss_pred             ------HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHc----
Confidence                  55889999999998632    33679999999999999999999999999998876 7999999999988    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+.............
T Consensus       151 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~  211 (271)
T 3tzq_B          151 ----------------AAYDMSTAYACTKAAIETLTRYVATQYG---RHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFAT  211 (271)
T ss_dssp             ----------------SBCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCTTTC---CHHHHHHHHT
T ss_pred             ----------------CCCCCChHHHHHHHHHHHHHHHHHHHHh---hcCEEEEEEEeCCCcCccccccCCHHHHHHHHh
Confidence                            6778889999999999999999999998   789999999999999999863222222222333


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ..+++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       212 ~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          212 HHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence            456788899999999999765433 35789999999993

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=7.7e-43  Score=319.25  Aligned_cols=248  Identities=19%  Similarity=0.189  Sum_probs=211.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +..++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++.++++|++|+++++++++++.
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            446889999999999999999999999999999999999999888888886543 4679999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||..+.     
T Consensus       101 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-----  168 (277)
T 4fc7_A          101 K------EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGN-----  168 (277)
T ss_dssp             H------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHH-----
T ss_pred             H------HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhC-----
Confidence            8      4588999999999763  445789999999999999999999999999997765 6899999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-h-hHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-P-SFLSLMAFT  293 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~-~~~~~~~~~  293 (369)
                                     .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.... . .........
T Consensus       169 ---------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~  230 (277)
T 4fc7_A          169 ---------------RGQALQVHAGSAKAAVDAMTRHLAVEWG---PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKV  230 (277)
T ss_dssp             ---------------HTCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHH
T ss_pred             ---------------CCCCCcHHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEECCEecchhhhhccCCHHHHHHHh
Confidence                           6677889999999999999999999998   7899999999999999864321 1 111222233


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccC
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  336 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~  336 (369)
                      ...|++|+.+|+|+|+++++++... ...+|+.+.+++|.....
T Consensus       231 ~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          231 TASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             HTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred             ccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence            4457889999999999999655432 357899999999987643

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-42  Score=316.07  Aligned_cols=246  Identities=26%  Similarity=0.353  Sum_probs=190.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.++++|+++||||++|||+++|++|+++|++|++++| +.+.++++.+++...  +.++.++++|++|+++++++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            44678999999999999999999999999999999995 777788888888665  567999999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEeccccc----cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHR  210 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~  210 (369)
                      .+      .++++|+||||||+.    .+..+.+.++|++++++|+.|+++++++++|.|++++  ..|+||++||.++.
T Consensus       102 ~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~  175 (280)
T 4da9_A          102 VA------EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV  175 (280)
T ss_dssp             HH------HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---
T ss_pred             HH------HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc
Confidence            98      458899999999983    3455789999999999999999999999999997643  15799999999988


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  290 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~  290 (369)
                                          .+.++...|++||+|++.++++++.|++   +.||+||+|+||+|+|++.+.........
T Consensus       176 --------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  232 (280)
T 4da9_A          176 --------------------MTSPERLDYCMSKAGLAAFSQGLALRLA---ETGIAVFEVRPGIIRSDMTAAVSGKYDGL  232 (280)
T ss_dssp             ------------------------CCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCC-------------
T ss_pred             --------------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---HhCcEEEEEeecCCcCCchhhcchhHHHH
Confidence                                6778889999999999999999999998   88999999999999999987653322211


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  334 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~  334 (369)
                      ......|++++.+|+|+|+.+++++.... ..+|+.+..++|...
T Consensus       233 ~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          233 IESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             ---------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             HhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            11224678899999999999996554332 468999999988654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.1e-42  Score=318.50  Aligned_cols=242  Identities=22%  Similarity=0.234  Sum_probs=204.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|+++++++++++.+ 
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~-   97 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVE-   97 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            457899999999999999999999999999999999999999999888765  56789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhH--hhhcCCCCCeEEEEcCCcccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP--LLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~--~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                           .++++|+||||||+..  +..+.+.+.|++++++|+.|+++++++++|  .|++++ .|+||++||.++.     
T Consensus        98 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~-----  166 (279)
T 3sju_A           98 -----RFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGK-----  166 (279)
T ss_dssp             -----HHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGT-----
T ss_pred             -----HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhc-----
Confidence                 4588999999999863  445789999999999999999999999999  576655 6899999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----------h
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----------S  285 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----------~  285 (369)
                                     .+.++...|++||+|+++++++++.|++   +.||+||+|+||+|+|++.+...          .
T Consensus       167 ---------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  228 (279)
T 3sju_A          167 ---------------QGVMYAAPYTASKHGVVGFTKSVGFELA---KTGITVNAVCPGYVETPMAERVREGYARHWGVTE  228 (279)
T ss_dssp             ---------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCH
T ss_pred             ---------------cCCCCChhHHHHHHHHHHHHHHHHHHHH---hhCcEEEEEeeCcccchHHHHHHhhhhhcccCCh
Confidence                           7778889999999999999999999998   78999999999999999876532          1


Q ss_pred             HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          286 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ...........|++++.+|+|+|+.+++++... ...+|+.+.+++|..
T Consensus       229 ~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          229 QEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            111222233356788999999999999544322 246899999998864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=2.5e-42  Score=315.43  Aligned_cols=240  Identities=21%  Similarity=0.249  Sum_probs=207.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.++.+|++|.++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999999999998888765  56789999999999999999999987


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            . +++|+||||||+.  .+..+.++++|++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus       107 ------~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~------  172 (275)
T 4imr_A          107 ------I-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQL------  172 (275)
T ss_dssp             ------H-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------
T ss_pred             ------h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhC------
Confidence                  4 7899999999986  3445789999999999999999999999999998776 6899999999987      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLSLMAFTV  294 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~  294 (369)
                                    .+.++...|++||+|++.++++++.|++   +.||+||+|+||+|+|++......  .........
T Consensus       173 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  235 (275)
T 4imr_A          173 --------------RPKSVVTAYAATKAAQHNLIQSQARDFA---GDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVR  235 (275)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHH
T ss_pred             --------------CCCCCchhhHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEeccccCcccccccccChHHHHHHHh
Confidence                          6667778899999999999999999998   789999999999999999765422  111222233


Q ss_pred             HH-HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017580          295 LK-LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  331 (369)
Q Consensus       295 ~~-~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g  331 (369)
                      .. |++|+.+|+|+|+++++++... ...+|+.+.+++|
T Consensus       236 ~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          236 TLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             hcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            33 7889999999999999655432 3578999998887

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.8e-42  Score=316.46  Aligned_cols=244  Identities=19%  Similarity=0.284  Sum_probs=208.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.+
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999999988765  45788999999999999999999998


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++.+|+||++||..+...    
T Consensus       106 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~----  175 (276)
T 3r1i_A          106 ------ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII----  175 (276)
T ss_dssp             ------HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc----
Confidence                  4588999999999874  3457799999999999999999999999999987754589999999887621    


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    ...++...|++||+|++.++++++.|++   +.+|+||+|+||+|+|++.+..+....  ......
T Consensus       176 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~  236 (276)
T 3r1i_A          176 --------------NIPQQVSHYCTSKAAVVHLTKAMAVELA---PHQIRVNSVSPGYIRTELVEPLADYHA--LWEPKI  236 (276)
T ss_dssp             --------------CCSSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSTTTGGGGGGHH--HHGGGS
T ss_pred             --------------CCCCCcchHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEeeCCCcCCccccchHHHH--HHHhcC
Confidence                          1223567899999999999999999998   789999999999999999876544221  223345


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      |++++.+|+|+|+++++++... ...+|+.+.+++|..
T Consensus       237 p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          237 PLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence            6788999999999999665432 367899999998864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3e-42  Score=315.12  Aligned_cols=241  Identities=23%  Similarity=0.282  Sum_probs=206.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888887776     56789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+.  .+..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+.      
T Consensus       100 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~------  166 (277)
T 3gvc_A          100 ------AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQ------  166 (277)
T ss_dssp             ------HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------
Confidence                  458899999999986  3456789999999999999999999999999998876 7999999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---HH---HH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---LS---LM  290 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~---~~---~~  290 (369)
                                    .+.++...|++||+|++.++++++.|++   +.||+||+|+||+|+|++.+.....   ..   ..
T Consensus       167 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  229 (277)
T 3gvc_A          167 --------------VAVGGTGAYGMSKAGIIQLSRITAAELR---SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGA  229 (277)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHTCC------CCH
T ss_pred             --------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhh
Confidence                          7778889999999999999999999998   7899999999999999987543210   00   01


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ......|++++.+|+|+|+++++++... ...+|+.+.+++|...
T Consensus       230 ~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          230 RSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             HHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchh
Confidence            1122467789999999999999765432 3678999999998765

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=5.5e-42  Score=316.94  Aligned_cols=244  Identities=21%  Similarity=0.265  Sum_probs=204.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC------------cchHHHHHHHHHhhcCCCcEEEEEecCCCh
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLSSF  126 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~  126 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+            .++++++.+++...  +.++.++++|++|+
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVRDF  101 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCH
Confidence            46889999999999999999999999999999999987            56677777777654  56899999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCccEEEeccccccC---CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEE
Q 017580          127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN  203 (369)
Q Consensus       127 ~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~  203 (369)
                      ++++++++++.+      .++++|+||||||+...   ..+.+.++|++++++|+.|+++++++++|.|.+++..|+||+
T Consensus       102 ~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~  175 (299)
T 3t7c_A          102 DAMQAAVDDGVT------QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVF  175 (299)
T ss_dssp             HHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred             HHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            999999999998      45889999999998642   557899999999999999999999999999877654689999


Q ss_pred             EcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc
Q 017580          204 VTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV  283 (369)
Q Consensus       204 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~  283 (369)
                      +||.++.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..
T Consensus       176 isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~  232 (299)
T 3t7c_A          176 TSSIGGL--------------------RGAENIGNYIASKHGLHGLMRTMALELG---PRNIRVNIVCPSSVATPMLLNE  232 (299)
T ss_dssp             ECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCBSSTTTSSH
T ss_pred             ECChhhc--------------------cCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCCccCcccccc
Confidence            9999988                    7778889999999999999999999998   7899999999999999997642


Q ss_pred             hhHH------------HHH---HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          284 PSFL------------SLM---AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       284 ~~~~------------~~~---~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ....            ...   ......| +++.+|+|+|+++++++... ...+|+.+.+++|...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          233 PTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             HHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             chhhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            2110            000   0111112 56789999999999655432 3578999999998754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=5.7e-42  Score=314.13  Aligned_cols=247  Identities=20%  Similarity=0.261  Sum_probs=203.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC------------cchHHHHHHHHHhhcCCCcEEEEEecCC
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLS  124 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls  124 (369)
                      ++.+++||+++||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++++|++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   81 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVK   81 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCC
Confidence            3557899999999999999999999999999999999997            44566666666554  567999999999


Q ss_pred             ChHHHHHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEE
Q 017580          125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV  202 (369)
Q Consensus       125 ~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV  202 (369)
                      |+++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||
T Consensus        82 ~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv  154 (281)
T 3s55_A           82 DRAALESFVAEAED------TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIV  154 (281)
T ss_dssp             CHHHHHHHHHHHHH------HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEE
T ss_pred             CHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            99999999999998      4588999999999863  456789999999999999999999999999998766 68999


Q ss_pred             EEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc
Q 017580          203 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE  282 (369)
Q Consensus       203 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~  282 (369)
                      ++||..+.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.
T Consensus       155 ~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          155 TVSSMLGH--------------------SANFAQASYVSSKWGVIGLTKCAAHDLV---GYGITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             EECCGGGG--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCSTTTSS
T ss_pred             EECChhhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCcccCccccc
Confidence            99999988                    7778889999999999999999999998   789999999999999999764


Q ss_pred             chh------------HHHHHHH--HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          283 VPS------------FLSLMAF--TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       283 ~~~------------~~~~~~~--~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ...            .......  ......+++.+|+|+|+++++++... ...+|+.+..++|....
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          212 DFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            210            0000000  00011157789999999999665432 35689999999987653

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.1e-42  Score=316.68  Aligned_cols=240  Identities=22%  Similarity=0.292  Sum_probs=207.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.+.++++.+++...  +.++.++++|++|+++++++++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999988 667777777777665  5678999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.     
T Consensus       102 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-----  169 (269)
T 4dmm_A          102 E------RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGE-----  169 (269)
T ss_dssp             H------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHH-----
T ss_pred             H------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhc-----
Confidence            8      5588999999999874  345779999999999999999999999999998765 6899999999887     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....    ......
T Consensus       170 ---------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~  227 (269)
T 4dmm_A          170 ---------------MGNPGQANYSAAKAGVIGLTKTVAKELA---SRGITVNAVAPGFIATDMTSELAA----EKLLEV  227 (269)
T ss_dssp             ---------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBTTSCSCHHHH----HHHGGG
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEEECCCcCcccccccH----HHHHhc
Confidence                           6677889999999999999999999998   789999999999999999865432    122233


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCccc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTV  334 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~~~g~~~  334 (369)
                      .|++++.+|+|+|+++++++..+  ...+|+.+.+++|..+
T Consensus       228 ~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          228 IPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            56788999999999999766542  2568999999988653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=9.1e-42  Score=313.41  Aligned_cols=258  Identities=16%  Similarity=0.194  Sum_probs=201.9

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++.+|++|+++++++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999985 5555666655432  36789999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      +      .++++|+||||||+..      +..+.+.+++++++++|+.|+++++++++|.|+++  .|+||++||.++. 
T Consensus        95 ~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~-  165 (285)
T 2p91_A           95 E------NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAE-  165 (285)
T ss_dssp             H------HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGT-
T ss_pred             H------HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhc-
Confidence            8      5689999999999863      34477899999999999999999999999999764  4899999998887 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~  290 (369)
                                         .+.++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+........ .
T Consensus       166 -------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~  223 (285)
T 2p91_A          166 -------------------KVVPHYNVMGIAKAALESTVRYLAYDIA---KHGHRINAISAGPVKTLAAYSITGFHLLME  223 (285)
T ss_dssp             -------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCSCC--CTTHHHHHH
T ss_pred             -------------------cCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEeCcccCchhhcccchHHHHH
Confidence                               6667788999999999999999999998   7899999999999999997654321111 1


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCCHHHHHHHHHH
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTT  352 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~  352 (369)
                      ......|++++.+|+|+|+++++++... ...+|+.+..++|.... +....|++.+++||+.
T Consensus       224 ~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~-~~~~~~~~~~~~lw~~  285 (285)
T 2p91_A          224 HTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHIM-GVFGREEEIKKEVYGD  285 (285)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB-SCC-------------
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccc-cccCChHHHHHHhcCC
Confidence            1222346678899999999999665332 25589999888887654 5667899999999974

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.1e-42  Score=314.69  Aligned_cols=246  Identities=20%  Similarity=0.259  Sum_probs=206.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~-   79 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDE-   79 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999999999988888654  45789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|.+++..|+||++||..+.       
T Consensus        80 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------  147 (257)
T 3imf_A           80 -----KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAW-------  147 (257)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGG-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhc-------
Confidence                 5588999999999863  44578999999999999999999999999999544336899999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH--HHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF--LSLMAFTVL  295 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~  295 (369)
                                   .+.++...|++||+|+++|+++++.|++.  +.||+||+|+||+|+|++.......  .........
T Consensus       148 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~--~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  212 (257)
T 3imf_A          148 -------------DAGPGVIHSAAAKAGVLAMTKTLAVEWGR--KYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQS  212 (257)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHH--HHCCEEEEEEECCBSSCCCC-------CCSHHHHTT
T ss_pred             -------------cCCCCcHHHHHHHHHHHHHHHHHHHHhcc--ccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhc
Confidence                         67788899999999999999999999841  3599999999999999976432110  001112233


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      .|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       213 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          213 VPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             CCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            56778999999999999765433 25689999999998754

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=4.8e-43  Score=318.00  Aligned_cols=244  Identities=18%  Similarity=0.192  Sum_probs=198.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC---cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS---SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+   .+.++++.+++...  +.++.++++|++|+++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~   83 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFD   83 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHH
Confidence            456889999999999999999999999999999998765   45677777777655  5689999999999999999999


Q ss_pred             HHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      ++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++   .|+||++||.++.  
T Consensus        84 ~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~--  152 (262)
T 3ksu_A           84 FAEK------EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITIATSLLA--  152 (262)
T ss_dssp             HHHH------HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE---EEEEEEECCCHHH--
T ss_pred             HHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCEEEEEechhhc--
Confidence            9998      5588999999999874  3457899999999999999999999999999943   4899999999887  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                                        .+.++...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++.+...........
T Consensus       153 ------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~  211 (262)
T 3ksu_A          153 ------------------AYTGFYSTYAGNKAPVEHYTRAASKELM---KQQISVNAIAPGPMDTSFFYGQETKESTAFH  211 (262)
T ss_dssp             ------------------HHHCCCCC-----CHHHHHHHHHHHHTT---TTTCEEEEEEECCCCTHHHHTCC--------
T ss_pred             ------------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEeeCCCcCccccccCchHHHHHH
Confidence                              5556677899999999999999999998   8899999999999999997664332222233


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      ....+.+++.+|+|+|+++++++..+...+|+.+..++|....
T Consensus       212 ~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          212 KSQAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTTR  254 (262)
T ss_dssp             ----CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC
T ss_pred             HhcCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccCC
Confidence            3445677899999999999977655446789999999987664

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=7.7e-42  Score=310.70  Aligned_cols=247  Identities=19%  Similarity=0.185  Sum_probs=204.6

Q ss_pred             CCCCCCCCCEEEEeCCC-CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas-~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      +.+.++++|+++||||+ +|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|+++++++++
T Consensus        15 ~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~   93 (266)
T 3o38_A           15 DGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALIT   93 (266)
T ss_dssp             CCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHH
Confidence            44557899999999998 599999999999999999999999999999998886553 4689999999999999999999


Q ss_pred             HHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      ++.+      .++++|+||||||+..  +..+.+.+++++++++|+.+++++++.++|.|++++..++||++||..+.  
T Consensus        94 ~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~--  165 (266)
T 3o38_A           94 QTVE------KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW--  165 (266)
T ss_dssp             HHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT--
T ss_pred             HHHH------HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc--
Confidence            9998      4578999999999864  34477999999999999999999999999999987447899999999988  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                                        .+.++...|++||+|++.|+++++.|++   +.||+|++|+||+|+|++.+...........
T Consensus       166 ------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~  224 (266)
T 3o38_A          166 ------------------RAQHSQSHYAAAKAGVMALTRCSAIEAV---EFGVRINAVSPSIARHKFLEKTSSSELLDRL  224 (266)
T ss_dssp             ------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCC---------------
T ss_pred             ------------------CCCCCCchHHHHHHHHHHHHHHHHHHHH---HcCcEEEEEeCCcccchhhhccCcHHHHHHH
Confidence                              7778889999999999999999999998   7899999999999999998765433222223


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ....+++++.+|+|+|+.+++++... ...+|+++..++|.
T Consensus       225 ~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          225 ASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             --CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            33346778899999999999766542 36789999988874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-42  Score=314.93  Aligned_cols=239  Identities=25%  Similarity=0.293  Sum_probs=194.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++||++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++...  +.++.++++|++|+++++++++++.+
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999988 55667777877777665  46789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.+.|++++++|+.|+++++++++|.|++   .|+||++||..+.      
T Consensus       102 ------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~------  166 (267)
T 3u5t_A          102 ------AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVG------  166 (267)
T ss_dssp             ------HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHH------
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhc------
Confidence                  4588999999999863  4457889999999999999999999999999965   3899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.................
T Consensus       167 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  229 (267)
T 3u5t_A          167 --------------LLHPSYGIYAAAKAGVEAMTHVLSKELR---GRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLA  229 (267)
T ss_dssp             --------------HCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSCCEEEEEEECCBC-----------CHHHHHTSS
T ss_pred             --------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCCEEEEEEECCCcCccccccCCHHHHHHHHhcC
Confidence                          6677888999999999999999999998   88999999999999999976532222122233345


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      |++++.+|+|+|+++++++... ...+|+.+..++|.
T Consensus       230 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          230 PLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            7788999999999999665432 25689999988874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-42  Score=315.54  Aligned_cols=246  Identities=18%  Similarity=0.227  Sum_probs=200.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.... +.++.++.+|++|+++++++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999 5667777777776543 467999999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.    
T Consensus        99 ~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~----  167 (281)
T 3v2h_A           99 AD------RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGL----  167 (281)
T ss_dssp             HH------HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT----
T ss_pred             HH------HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccc----
Confidence            98      6689999999999863  345779999999999999999999999999998876 6899999999988    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-----
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-----  289 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-----  289 (369)
                                      .+.++...|++||+|+++++++++.|++   +.||+||+|+||+|+|++.+........     
T Consensus       168 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~  228 (281)
T 3v2h_A          168 ----------------VASPFKSAYVAAKHGIMGLTKTVALEVA---ESGVTVNSICPGYVLTPLVEKQIPDQARTRGIT  228 (281)
T ss_dssp             ----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCC-----------------
T ss_pred             ----------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEECCCCcCcchhhhcchhhhhcCCC
Confidence                            7778889999999999999999999998   7899999999999999997653221100     


Q ss_pred             ------HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          290 ------MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       290 ------~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                            .......|++++.+|+|+|+++++++... ...+|+.+..++|...
T Consensus       229 ~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          229 EEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             -----------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence                  01122246678899999999999655432 2468999999988643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=4.2e-42  Score=315.81  Aligned_cols=244  Identities=22%  Similarity=0.251  Sum_probs=203.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC----------------cchHHHHHHHHHhhcCCCcEEEEEec
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS----------------SHLLSETMADITSRNKDARLEAFQVD  122 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~----------------~~~~~~~~~~~~~~~~~~~v~~~~~D  122 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+                .++++++.+++...  +.++.++++|
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D   84 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVD   84 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcC
Confidence            35789999999999999999999999999999999987                56667776666554  5689999999


Q ss_pred             CCChHHHHHHHHHHHHHHhccCCCCCccEEEeccccccC---CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCC
Q 017580          123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS  199 (369)
Q Consensus       123 ls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g  199 (369)
                      ++|+++++++++++.+      .++++|+||||||+...   ..+.+.++|++++++|+.|+++++++++|.|++++..|
T Consensus        85 v~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g  158 (286)
T 3uve_A           85 VRDYDALKAAVDSGVE------QLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGG  158 (286)
T ss_dssp             TTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE
T ss_pred             CCCHHHHHHHHHHHHH------HhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCc
Confidence            9999999999999998      45889999999998643   45779999999999999999999999999998764458


Q ss_pred             eEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          200 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       200 ~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                      +||++||..+.                    .+.++...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++
T Consensus       159 ~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gI~vn~v~PG~v~T~~  215 (286)
T 3uve_A          159 SIILTSSVGGL--------------------KAYPHTGHYVAAKHGVVGLMRAFGVELG---QHMIRVNSVHPTHVKTPM  215 (286)
T ss_dssp             EEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBSSTT
T ss_pred             EEEEECchhhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCcccCCc
Confidence            99999999988                    7788889999999999999999999998   789999999999999999


Q ss_pred             cccchhHHH------------HHH---HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          280 MREVPSFLS------------LMA---FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       280 ~~~~~~~~~------------~~~---~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .+.......            ...   .....| +++.+|+|+|+++++++... ...+|+.+.+++|...
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          216 LHNEGTFKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             TSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccccchhhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            764221100            000   001112 57789999999999655432 3578999999998654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=3.8e-42  Score=309.23  Aligned_cols=240  Identities=21%  Similarity=0.268  Sum_probs=205.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++|+++||||++|||+++|++|+++|++|++++| +.++++++.+++...  +.++.++++|++|+++++++++++.+ 
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~-   78 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVS-   78 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            45799999999999999999999999999999877 557778888887665  56789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        79 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  145 (246)
T 3osu_A           79 -----QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGA-------  145 (246)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH-------
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhc-------
Confidence                 5588999999999873  456789999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||+|+++++++++.|++   +.||+||+|+||+++|++.+....... .......|
T Consensus       146 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~p  208 (246)
T 3osu_A          146 -------------VGNPGQANYVATKAGVIGLTKSAARELA---SRGITVNAVAPGFIVSDMTDALSDELK-EQMLTQIP  208 (246)
T ss_dssp             -------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBGGGCCSCSCHHHH-HHHHTTCT
T ss_pred             -------------CCCCCChHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEECCCcCCcccccCHHHH-HHHHhcCC
Confidence                         6678889999999999999999999998   789999999999999999876543321 22233456


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ++++.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       209 ~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          209 LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            788999999999999654332 256799999888853

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=9.9e-42  Score=307.64  Aligned_cols=238  Identities=23%  Similarity=0.296  Sum_probs=203.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecC--CChHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL--SSFQSVLKFKD  134 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--s~~~~i~~~~~  134 (369)
                      ....++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.. +.++.++.+|+  +|.++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   84 (252)
T 3f1l_A            6 KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQ   84 (252)
T ss_dssp             CTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHH
Confidence            3446889999999999999999999999999999999999999999988887654 34678999999  99999999999


Q ss_pred             HHHHHHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      ++.+      .++++|+||||||+.   .+..+.++++|++++++|+.|+++++++++|.|++++ .|+||++||..+. 
T Consensus        85 ~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~-  156 (252)
T 3f1l_A           85 RIAV------NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGR-  156 (252)
T ss_dssp             HHHH------HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGT-
T ss_pred             HHHH------hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhc-
Confidence            9988      678999999999985   3556789999999999999999999999999998876 7899999999988 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  291 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~  291 (369)
                                         .+.++...|++||+|+++++++++.|++   +. |+||+|+||+|+|++.......     
T Consensus       157 -------------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~-irvn~v~PG~v~t~~~~~~~~~-----  208 (252)
T 3f1l_A          157 -------------------QGRANWGAYAASKFATEGMMQVLADEYQ---QR-LRVNCINPGGTRTAMRASAFPT-----  208 (252)
T ss_dssp             -------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TT-CEEEEEECCSBSSHHHHHHCTT-----
T ss_pred             -------------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---CC-cEEEEEecCcccCchhhhhCCc-----
Confidence                               7778889999999999999999999996   55 9999999999999986532111     


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                          .+..++.+|+|+|+.+++++... ...+|+.+..++|+...
T Consensus       209 ----~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          209 ----EDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             ----CCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC----
T ss_pred             ----cchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCC
Confidence                01235679999999999765433 35789999999988653

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-42  Score=312.97  Aligned_cols=240  Identities=21%  Similarity=0.215  Sum_probs=190.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+ 
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   77 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQ-   77 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999888777666     45789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccccCC------CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-----CCCCeEEEEcCCc
Q 017580          140 LLDSDMHSSIQLLINNAGILATS------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-----PVPSRIVNVTSFT  208 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----~~~g~IV~vsS~~  208 (369)
                           .++++|+||||||+..+.      .+.+.++|++++++|+.|+++++++++|.|+++     ++.|+||++||.+
T Consensus        78 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~  152 (257)
T 3tpc_A           78 -----EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIA  152 (257)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred             -----HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechh
Confidence                 558899999999987432      256789999999999999999999999999875     2368999999999


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  288 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~  288 (369)
                      +.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..+....
T Consensus       153 ~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~  209 (257)
T 3tpc_A          153 AF--------------------DGQIGQAAYAASKGGVAALTLPAARELA---RFGIRVVTIAPGIFDTPMMAGMPQDVQ  209 (257)
T ss_dssp             HH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBSCC----------
T ss_pred             hc--------------------cCCCCCcchHHHHHHHHHHHHHHHHHHH---HcCeEEEEEEeCCCCChhhccCCHHHH
Confidence            88                    6777889999999999999999999998   789999999999999999876543221


Q ss_pred             HHHHHHHHHh-hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          289 LMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       289 ~~~~~~~~~~-~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                       .......|+ +++.+|+|+|+.+++++.. ...+|+.+..++|....
T Consensus       210 -~~~~~~~p~~~r~~~~~dva~~v~~l~s~-~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          210 -DALAASVPFPPRLGRAEEYAALVKHICEN-TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             -----CCSSSSCSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTTCCC-
T ss_pred             -HHHHhcCCCCCCCCCHHHHHHHHHHHccc-CCcCCcEEEECCCccCC
Confidence             111222344 6889999999999977643 57789999999987654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-41  Score=310.25  Aligned_cols=242  Identities=23%  Similarity=0.281  Sum_probs=205.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+ +..++..+++.+.  +.++.++.+|++|+++++++.+.+.+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVAEELAA  103 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHh
Confidence            46889999999999999999999999999999999966 5566777777654  56889999999999999999666554


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                             ++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus       104 -------~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~------  169 (273)
T 3uf0_A          104 -------TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSF------  169 (273)
T ss_dssp             -------HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------
T ss_pred             -------cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhc------
Confidence                   478999999999874  445789999999999999999999999999998776 6899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~  295 (369)
                                    .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+..... .........
T Consensus       170 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  232 (273)
T 3uf0_A          170 --------------QGGRNVAAYAASKHAVVGLTRALASEWA---GRGVGVNALAPGYVVTANTAALRADDERAAEITAR  232 (273)
T ss_dssp             --------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHH
T ss_pred             --------------CCCCCChhHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhc
Confidence                          7778889999999999999999999998   7899999999999999997654321 222233444


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .|++++.+|+|+|+++++++... ...+|+.+.+++|...
T Consensus       233 ~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          233 IPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             STTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            57789999999999999765432 3678999999988653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=7.9e-42  Score=313.03  Aligned_cols=244  Identities=20%  Similarity=0.209  Sum_probs=202.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-------------CcchHHHHHHHHHhhcCCCcEEEEEecCC
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-------------SSHLLSETMADITSRNKDARLEAFQVDLS  124 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-------------~~~~~~~~~~~~~~~~~~~~v~~~~~Dls  124 (369)
                      +.+++||+++||||++|||+++|++|+++|++|++++|             +.++++++.+++...  +.++.++.+|++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   87 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVR   87 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTT
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCC
Confidence            45688999999999999999999999999999999998             667777777777654  567899999999


Q ss_pred             ChHHHHHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEE
Q 017580          125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV  202 (369)
Q Consensus       125 ~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV  202 (369)
                      |+++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++..|+||
T Consensus        88 ~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv  161 (280)
T 3pgx_A           88 DDAALRELVADGME------QFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIV  161 (280)
T ss_dssp             CHHHHHHHHHHHHH------HHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEE
T ss_pred             CHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            99999999999998      5588999999999864  445789999999999999999999999999998764368999


Q ss_pred             EEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc
Q 017580          203 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE  282 (369)
Q Consensus       203 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~  282 (369)
                      ++||.++.                    .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+.
T Consensus       162 ~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          162 VVSSSAGL--------------------KATPGNGHYSASKHGLTALTNTLAIELG---EYGIRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             EECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSTTCCH
T ss_pred             EEcchhhc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcccCcccch
Confidence            99999988                    7778889999999999999999999998   789999999999999999764


Q ss_pred             chhHHHHHHH---------HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          283 VPSFLSLMAF---------TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       283 ~~~~~~~~~~---------~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ..........         ....+. ++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          219 EAMMEIFARHPSFVHSFPPMPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             HHHHHHHHHCGGGGGGSCCBTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred             hhhhhhhhcCchhhhhhhhcccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            2111000000         001122 5679999999999655432 256899999998864

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.4e-41  Score=309.68  Aligned_cols=241  Identities=22%  Similarity=0.268  Sum_probs=202.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++||++|||||++|||+++|++|+++|++|++++++ .+.++++.+++...  +.++.++++|++|+++++++++++.
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999997764 56677777777665  5678999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++   .|+||++||..+.     
T Consensus        92 ~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~-----  157 (270)
T 3is3_A           92 A------HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSK-----  157 (270)
T ss_dssp             H------HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTT-----
T ss_pred             H------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhc-----
Confidence            8      4588999999999863  4457899999999999999999999999999976   4899999998832     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-----------h
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-----------P  284 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-----------~  284 (369)
                                    ..+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..           .
T Consensus       158 --------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  220 (270)
T 3is3_A          158 --------------DFSVPKHSLYSGSKGAVDSFVRIFSKDCG---DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYT  220 (270)
T ss_dssp             --------------TCCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSC
T ss_pred             --------------cCCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCCccChhhhhhhhhccccccccc
Confidence                          15667889999999999999999999998   7899999999999999997632           1


Q ss_pred             hHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          285 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ............|++|+.+|+|+|+++++++... ...+|+.+..++|.
T Consensus       221 ~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          221 AEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             hHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            1122222334457889999999999999654322 25689999988874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-42  Score=312.40  Aligned_cols=246  Identities=21%  Similarity=0.220  Sum_probs=206.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+..++.++.++.+|++|+++++++++++.
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999888888888766545678999999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      +      .++++|+||||||+..   +..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||..+.    
T Consensus        88 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~----  156 (267)
T 1iy8_A           88 E------RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGI----  156 (267)
T ss_dssp             H------HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT----
T ss_pred             H------HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhc----
Confidence            8      4588999999999863   345678999999999999999999999999998765 6899999999887    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-----hhHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-----PSFLSL  289 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-----~~~~~~  289 (369)
                                      .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+..     +.....
T Consensus       157 ----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  217 (267)
T 1iy8_A          157 ----------------RGIGNQSGYAAAKHGVVGLTRNSAVEYG---RYGIRINAIAPGAIWTPMVENSMKQLDPENPRK  217 (267)
T ss_dssp             ----------------SBCSSBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHH
T ss_pred             ----------------cCCCCCccHHHHHHHHHHHHHHHHHHHH---hcCeEEEEEEeCCCcCcchhccccccChhhhhh
Confidence                            6667888999999999999999999998   7899999999999999986542     111110


Q ss_pred             H--HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          290 M--AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       290 ~--~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .  ......|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       218 ~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  264 (267)
T 1iy8_A          218 AAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  264 (267)
T ss_dssp             HHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            0  1112236678889999999999655332 256899999888854

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=9.6e-42  Score=307.75  Aligned_cols=243  Identities=24%  Similarity=0.288  Sum_probs=175.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++.+|++|+++++++++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999888765  5688999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEeccccc-----cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL-----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~-----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      +      .++++|+||||||+.     .+..+.+.+.+++++++|+.+++++++.++|.|++++ .|+||++||.++.  
T Consensus        82 ~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~--  152 (253)
T 3qiv_A           82 A------EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW--  152 (253)
T ss_dssp             H------HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC------
T ss_pred             H------HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc--
Confidence            8      457899999999984     2345779999999999999999999999999998876 7899999998765  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                                           ++...|++||+|++.++++++.|++   +++|+|++|+||+|+|++.+...........
T Consensus       153 ---------------------~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~  208 (253)
T 3qiv_A          153 ---------------------LYSNYYGLAKVGINGLTQQLSRELG---GRNIRINAIAPGPIDTEANRTTTPKEMVDDI  208 (253)
T ss_dssp             ----------------------------CCHHHHHHHHHHHHHHTT---TTTEEEEEEEC--------------------
T ss_pred             ---------------------CCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEecCCcccchhhcCcHHHHHHH
Confidence                                 3456799999999999999999998   7899999999999999998765332222233


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ....+++++.+|+|+|+.+++++... ...+|+.|..++|..+.
T Consensus       209 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          209 VKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             -----------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred             hccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence            34456778889999999999765432 35689999999987653

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=9.5e-42  Score=308.97  Aligned_cols=243  Identities=22%  Similarity=0.225  Sum_probs=193.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++||+++||||++|||+++|++|+++|++|+++ .|+.+..++..+++.+.  +.++.++.+|++|+++++++++++.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998 66777778888887655  4578999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      +      .++++|+||||||+.   .+..+.+.+.|++++++|+.|+++++++++|.|++   .|+||++||.++.    
T Consensus        82 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~----  148 (259)
T 3edm_A           82 D------KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGR----  148 (259)
T ss_dssp             H------HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHH----
T ss_pred             H------HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhc----
Confidence            8      458899999999976   34557899999999999999999999999999976   4899999998875    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                     ..+.++...|++||+|+++++++++.|++   +. |+||+|+||+|+|++.+.............
T Consensus       149 ---------------~~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  209 (259)
T 3edm_A          149 ---------------DGGGPGALAYATSKGAVMTFTRGLAKEVG---PK-IRVNAVCPGMISTTFHDTFTKPEVRERVAG  209 (259)
T ss_dssp             ---------------HCCSTTCHHHHHHHHHHHHHHHHHHHHHT---TT-CEEEEEEECCBCC-----------------
T ss_pred             ---------------cCCCCCcHHHHHHHHHHHHHHHHHHHHHC---CC-CEEEEEEECCCcCcccccccChHHHHHHHh
Confidence                           13456788999999999999999999997   54 999999999999999876543222233344


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ..|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       210 ~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          210 ATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             -----CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCC
Confidence            567889999999999999655432 35689999999887764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-41  Score=305.28  Aligned_cols=241  Identities=21%  Similarity=0.276  Sum_probs=210.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++.+|++|+++++++++++.+ 
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKA-   78 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            367899999999999999999999999999999999999999988888765  46789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.+.+++++++++|+.+++.+++.++|.|.+++ .|+||++||..+.       
T Consensus        79 -----~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  145 (247)
T 3lyl_A           79 -----ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGS-------  145 (247)
T ss_dssp             -----TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH-------
T ss_pred             -----HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc-------
Confidence                 7789999999999874  344779999999999999999999999999998766 6899999999987       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||+|++.++++++.|++   +.||+|++|+||+|+|++.+....... .......|
T Consensus       146 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~  208 (247)
T 3lyl_A          146 -------------AGNPGQTNYCAAKAGVIGFSKSLAYEVA---SRNITVNVVAPGFIATDMTDKLTDEQK-SFIATKIP  208 (247)
T ss_dssp             -------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTTTTSCHHHH-HHHHTTST
T ss_pred             -------------cCCCCcHHHHHHHHHHHHHHHHHHHHHH---HcCeEEEEEeeCcEecccchhccHHHH-HHHhhcCC
Confidence                         6677889999999999999999999998   789999999999999999887644322 12223346


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .+++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       209 ~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          209 SGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEe
Confidence            678899999999999765433 356899999988864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-41  Score=307.45  Aligned_cols=243  Identities=22%  Similarity=0.331  Sum_probs=201.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.+|++|+++++++++++.+ 
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   94 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAH-   94 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999998888888887654  45789999999999999999999988 


Q ss_pred             HhccCCC-CCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMH-SSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~-~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .+ +++|+||||||+.  .+..+.+.+++++++++|+.++++++++++|.|++++ .|+||++||.++.      
T Consensus        95 -----~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~------  162 (273)
T 1ae1_A           95 -----VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGF------  162 (273)
T ss_dssp             -----HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGT------
T ss_pred             -----HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhc------
Confidence                 55 7899999999986  3456788999999999999999999999999998765 6899999999987      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMA  291 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-----~~~~~~  291 (369)
                                    .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+....     ......
T Consensus       163 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  225 (273)
T 1ae1_A          163 --------------SALPSVSLYSASKGAINQMTKSLACEWA---KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDN  225 (273)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBC-------------CHHHHHH
T ss_pred             --------------CCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHH
Confidence                          6677888999999999999999999998   789999999999999999764321     111112


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .....|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       226 ~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          226 FIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             HHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCccc
Confidence            223356778899999999999765432 2568999999988654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.3e-41  Score=308.07  Aligned_cols=236  Identities=19%  Similarity=0.221  Sum_probs=192.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+++.+..++.       .+.++.+|++|+++++++++++.
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-------GAVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-------TCEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-------CCeEEECCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999988764433332       26889999999999999999999


Q ss_pred             HHHhccCCCCCccEEEeccccccC-CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                      +      .++++|+||||||+... ..+.++++|++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus        95 ~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~------  161 (260)
T 3gem_A           95 T------QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTR------  161 (260)
T ss_dssp             H------HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGG------
T ss_pred             H------hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhc------
Confidence            8      67899999999998643 24667899999999999999999999999998876 6899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||+|++.|+++++.|++   + +|+||+|+||+++|++......   ........
T Consensus       162 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~-~Irvn~v~PG~v~t~~~~~~~~---~~~~~~~~  220 (260)
T 3gem_A          162 --------------KGSSKHIAYCATKAGLESLTLSFAARFA---P-LVKVNGIAPALLMFQPKDDAAY---RANALAKS  220 (260)
T ss_dssp             --------------TCCSSCHHHHHHHHHHHHHHHHHHHHHT---T-TCEEEEEEECTTCC------------------C
T ss_pred             --------------CCCCCcHhHHHHHHHHHHHHHHHHHHHC---C-CCEEEEEeecccccCCCCCHHH---HHHHHhcC
Confidence                          7778889999999999999999999997   5 6999999999999997542111   11222334


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      |++++.+|+|+|+++++++ .+...+|+.+.+++|..+.
T Consensus       221 p~~r~~~~edva~~v~~L~-~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          221 ALGIEPGAEVIYQSLRYLL-DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             CSCCCCCTHHHHHHHHHHH-HCSSCCSCEEEESTTTTTC
T ss_pred             CCCCCCCHHHHHHHHHHHh-hCCCCCCCEEEECCCcccC
Confidence            6778899999999999876 5567889999999998764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-41  Score=308.05  Aligned_cols=247  Identities=23%  Similarity=0.333  Sum_probs=205.5

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ++..++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++.+|++|++++++++++
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHH
Confidence            34457889999999999999999999999999999999999988888887773332 45788999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc-cccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT-HRNV  212 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~-~~~~  212 (369)
                      +.+      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.+ +.  
T Consensus        93 ~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--  163 (267)
T 1vl8_A           93 VKE------KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEE--  163 (267)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTC--
T ss_pred             HHH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhc--
Confidence            988      4578999999999863  345778999999999999999999999999998775 68999999988 66  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMA  291 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~  291 (369)
                                        .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+.... ......
T Consensus       164 ------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  222 (267)
T 1vl8_A          164 ------------------VTMPNISAYAASKGGVASLTKALAKEWG---RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDY  222 (267)
T ss_dssp             ------------------CCSSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSTTTHHHHTCHHHHHH
T ss_pred             ------------------cCCCCChhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeccCccccccccccChHHHHH
Confidence                              5667788999999999999999999998   789999999999999999764321 111111


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       223 ~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          223 MLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhhCCCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCCC
Confidence            122235678899999999999766543 356899999888854

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2e-41  Score=308.20  Aligned_cols=241  Identities=22%  Similarity=0.239  Sum_probs=204.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+++..+..+.+|++++++++++++     
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   81 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE-----   81 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH-----
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH-----
Confidence            578999999999999999999999999999999999999999999999888777889999999999999887664     


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        82 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  148 (267)
T 3t4x_A           82 -----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAI-------  148 (267)
T ss_dssp             -----HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGT-------
T ss_pred             -----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhc-------
Confidence                 3578999999999874  345778999999999999999999999999998876 6899999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FL  287 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~~  287 (369)
                                   .+.++...|++||+|+++++++++.|++   +.||+||+|+||+++|++.+....          ..
T Consensus       149 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  212 (267)
T 3t4x_A          149 -------------MPSQEMAHYSATKTMQLSLSRSLAELTT---GTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEE  212 (267)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHH
T ss_pred             -------------cCCCcchHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHH
Confidence                         7778889999999999999999999998   889999999999999998654211          11


Q ss_pred             HHHHHHH----HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          288 SLMAFTV----LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       288 ~~~~~~~----~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .......    ..|++|+.+|+|+|+++++++... ...+|+.+.+++|...
T Consensus       213 ~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  264 (267)
T 3t4x_A          213 AEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVR  264 (267)
T ss_dssp             HHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             HHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCccc
Confidence            1111111    124578999999999999655432 3678999999998754

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=4.4e-41  Score=310.42  Aligned_cols=246  Identities=16%  Similarity=0.102  Sum_probs=207.9

Q ss_pred             CCCCCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        58 ~~~~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +.+++||++|||||+|  |||+++|++|+++|++|++++|+++..+.+.+...+.   ..+.++++|++|++++++++++
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~  101 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAESVDNMFKV  101 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHH
Confidence            4468899999999997  9999999999999999999999976655554444333   2368899999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEeccccc------cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      +.+      .++++|+||||||+.      .+..+.+.++|++.+++|+.++++++++++|.|++   .|+||++||.++
T Consensus       102 ~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~  172 (296)
T 3k31_A          102 LAE------EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGA  172 (296)
T ss_dssp             HHH------HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGG
T ss_pred             HHH------HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhh
Confidence            998      558899999999986      34457899999999999999999999999999976   489999999998


Q ss_pred             cccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH
Q 017580          210 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL  289 (369)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~  289 (369)
                      .                    .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+........
T Consensus       173 ~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~~  229 (296)
T 3k31_A          173 E--------------------KVVPHYNVMGVCKAALEASVKYLAVDLG---KQQIRVNAISAGPVRTLASSGISDFHYI  229 (296)
T ss_dssp             T--------------------SCCTTTTHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECCCCCSSCCSCHHHHHH
T ss_pred             c--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEECCCcCchhhcccchHHH
Confidence            8                    7778889999999999999999999998   7899999999999999998776543222


Q ss_pred             -HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCc
Q 017580          290 -MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSA  338 (369)
Q Consensus       290 -~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~  338 (369)
                       .......|++++.+|+|+|+++++++... ...+|+.+.+++|.......
T Consensus       230 ~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~~  280 (296)
T 3k31_A          230 LTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVVGMK  280 (296)
T ss_dssp             HHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccccCCc
Confidence             22334457889999999999999765432 36789999999998775443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.9e-41  Score=308.92  Aligned_cols=247  Identities=19%  Similarity=0.191  Sum_probs=199.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC------------cchHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++++|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            346889999999999999999999999999999999987            56677777766655  4689999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017580          126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  205 (369)
Q Consensus       126 ~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vs  205 (369)
                      +++++++++++.+      .++++|+||||||+.....  +.++|++++++|+.|+++++++++|.|++++..|+||++|
T Consensus        86 ~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is  157 (278)
T 3sx2_A           86 RESLSAALQAGLD------ELGRLDIVVANAGIAPMSA--GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLIS  157 (278)
T ss_dssp             HHHHHHHHHHHHH------HHCCCCEEEECCCCCCCSS--THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             HHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence            9999999999998      5588999999999864322  6899999999999999999999999998764468999999


Q ss_pred             CCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017580          206 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  285 (369)
Q Consensus       206 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~  285 (369)
                      |.++....                ..+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....
T Consensus       158 S~~~~~~~----------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~  218 (278)
T 3sx2_A          158 SSAGLAGV----------------GSADPGSVGYVAAKHGVVGLMRVYANLLA---GQMIRVNSIHPSGVETPMINNEFT  218 (278)
T ss_dssp             CGGGTSCC----------------CCSSHHHHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCBSSTTTSSHHH
T ss_pred             cHHhcCCC----------------ccCCCCchHhHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecCCccCccchhhhH
Confidence            99887210                02237888999999999999999999998   789999999999999999865322


Q ss_pred             HHHHHHHHHH----------HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          286 FLSLMAFTVL----------KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       286 ~~~~~~~~~~----------~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ..........          .| +++.+|+|+|+++++++... ...+|+.+..++|...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          219 REWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             HHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            1111100000          11 36679999999999654332 3578999999988643

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-41  Score=309.66  Aligned_cols=242  Identities=23%  Similarity=0.252  Sum_probs=201.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-------------CcchHHHHHHHHHhhcCCCcEEEEEecCCCh
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-------------SSHLLSETMADITSRNKDARLEAFQVDLSSF  126 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-------------~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~  126 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|             +.+++++..+++...  +.++.++.+|++|+
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   85 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRDF   85 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            578999999999999999999999999999999998             566677777776654  56799999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEE
Q 017580          127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV  204 (369)
Q Consensus       127 ~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~v  204 (369)
                      ++++++++++.+      .++++|+||||||+..+  ..+.+.++|++++++|+.|+++++++++|.|++++..|+||++
T Consensus        86 ~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~i  159 (277)
T 3tsc_A           86 DRLRKVVDDGVA------ALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILI  159 (277)
T ss_dssp             HHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             HHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            999999999998      55889999999998743  3478999999999999999999999999999876545899999


Q ss_pred             cCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017580          205 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  284 (369)
Q Consensus       205 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~  284 (369)
                      ||.++.                    .+.++...|++||+|++.|+++|+.|++   +.||+||+|+||+|+|++.+...
T Consensus       160 sS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~  216 (277)
T 3tsc_A          160 SSAAGM--------------------KMQPFMIHYTASKHAVTGLARAFAAELG---KHSIRVNSVHPGPVNTPMGSGDM  216 (277)
T ss_dssp             CCGGGT--------------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBSSGGGSHHH
T ss_pred             ccHhhC--------------------CCCCCchhhHHHHHHHHHHHHHHHHHhC---ccCeEEEEEEeCCCcCCcccchh
Confidence            999988                    7778889999999999999999999998   78999999999999999976421


Q ss_pred             hHHHHHH----------HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          285 SFLSLMA----------FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       285 ~~~~~~~----------~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .......          .....|. ++.+|+|+|+++++++... ...+|+.+.+++|..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          217 VTAVGQAMETNPQLSHVLTPFLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             HHHHHHHHHTCGGGTTTTCCSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhhhhcccccHHHHHHhhhccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence            1100000          0000112 5679999999999766433 357899999998864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.2e-41  Score=305.33  Aligned_cols=224  Identities=17%  Similarity=0.141  Sum_probs=181.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++++.  +.++.++.+|++|+++++++++++.+ 
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~-   80 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA-   80 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh-
Confidence            467999999999999999999999999999999999999999999998776  56899999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           . +++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        81 -----~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  146 (252)
T 3h7a_A           81 -----H-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASL-------  146 (252)
T ss_dssp             -----H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT-------
T ss_pred             -----h-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHc-------
Confidence                 6 88999999999864  345789999999999999999999999999998876 6899999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEE-EEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV-IAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v-~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                   .+.++...|++||+|+++|+++|+.|++   +.||+| |+|+||+|+|++.+....... .......
T Consensus       147 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~v~n~v~PG~v~T~~~~~~~~~~~-~~~~~~~  209 (252)
T 3h7a_A          147 -------------RGGSGFAAFASAKFGLRAVAQSMARELM---PKNIHVAHLIIDSGVDTAWVRERREQMF-GKDALAN  209 (252)
T ss_dssp             -------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC------------------------
T ss_pred             -------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEecCCccCChhhhccchhhh-hhhhhcC
Confidence                         7778899999999999999999999998   789999 999999999999876533211 1122233


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC
Q 017580          297 LLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      |.+ +.+|+|+|+++++++..+
T Consensus       210 ~~~-~~~pedvA~~~~~l~s~~  230 (252)
T 3h7a_A          210 PDL-LMPPAAVAGAYWQLYQQP  230 (252)
T ss_dssp             -----CCHHHHHHHHHHHHHCC
T ss_pred             Ccc-CCCHHHHHHHHHHHHhCc
Confidence            455 789999999999776544

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.6e-41  Score=309.57  Aligned_cols=231  Identities=23%  Similarity=0.270  Sum_probs=182.5

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|++++++++++
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~   95 (272)
T 4dyv_A           21 QSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTA   95 (272)
T ss_dssp             -------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHH
Confidence            3455678999999999999999999999999999999999999888888776     45789999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCcccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRN  211 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~~~~  211 (369)
                      +.+      .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|.|++++ +.|+||++||.++. 
T Consensus        96 ~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~-  168 (272)
T 4dyv_A           96 TVE------KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT-  168 (272)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT-
T ss_pred             HHH------HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc-
Confidence            998      4588999999999863   445789999999999999999999999999998764 25899999999988 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  291 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~  291 (369)
                                         .+.++...|++||+|+++|+++++.|++   +.+|+||+|+||+|+|++.+........  
T Consensus       169 -------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~--  224 (272)
T 4dyv_A          169 -------------------SPRPYSAPYTATKHAITGLTKSTSLDGR---VHDIACGQIDIGNADTPMAQKMKAGVPQ--  224 (272)
T ss_dssp             -------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEEECC---------------
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCEEEEEEEECcccChhhhhhcccchh--
Confidence                               7778889999999999999999999998   7899999999999999998765432211  


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCCCCCc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAPPETS  322 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~s  322 (369)
                      .....+.+++.+|+|+|+++++++..+....
T Consensus       225 ~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          225 ADLSIKVEPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             -----------CHHHHHHHHHHHHHSCTTSC
T ss_pred             hhhcccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence            1123455678899999999998877666443

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.3e-42  Score=314.51  Aligned_cols=245  Identities=21%  Similarity=0.277  Sum_probs=207.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC---EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF---HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~---~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +++||+++||||++|||+++|++|+++|+   +|++++|+.++++++.+++....++.++.++.+|++|+++++++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999998   999999999999999999988777788999999999999999999998


Q ss_pred             HHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      .+      .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.   
T Consensus       110 ~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~---  179 (287)
T 3rku_A          110 PQ------EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGR---  179 (287)
T ss_dssp             CG------GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT---
T ss_pred             HH------hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhc---
Confidence            87      6689999999999753   455789999999999999999999999999998766 6999999999988   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.......... ...
T Consensus       180 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~  238 (287)
T 3rku_A          180 -----------------DAYPTGSIYCASKFAVGAFTDSLRKELI---NTKIRVILIAPGLVETEFSLVRYRGNEE-QAK  238 (287)
T ss_dssp             -----------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSSCEEEEEEESCEESSHHHHHTTTCHH-HHH
T ss_pred             -----------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEeCCcCcCccccccccCcHH-HHH
Confidence                             7778889999999999999999999998   8899999999999999986432110000 001


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  335 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~~  335 (369)
                      .........+|+|+|+.+++++.... ..+|+.+..++|++.+
T Consensus       239 ~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~~p  281 (287)
T 3rku_A          239 NVYKDTTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQASP  281 (287)
T ss_dssp             HHHTTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEEET
T ss_pred             HhhcccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCCCC
Confidence            11112234589999999997665443 4578888888887654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.8e-42  Score=309.25  Aligned_cols=237  Identities=22%  Similarity=0.289  Sum_probs=196.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCC-CcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++ .++.++++|++|+++++++++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999999998876544 6789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccccC-CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                            .++++|+||||||+... ..+.+.++|++++++|+.|++.++++++|.|++++ .|+||++||.++.       
T Consensus        84 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  149 (250)
T 3nyw_A           84 ------KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAK-------  149 (250)
T ss_dssp             ------HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------
T ss_pred             ------hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhc-------
Confidence                  55889999999998632 22678899999999999999999999999998766 6899999999987       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.....         .+
T Consensus       150 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~---------~~  204 (250)
T 3nyw_A          150 -------------YGFADGGIYGSTKFALLGLAESLYRELA---PLGIRVTTLCPGWVNTDMAKKAGTP---------FK  204 (250)
T ss_dssp             ----------------CCTTHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCSHHHHHTTCC---------SC
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccCchhhhcCCC---------cc
Confidence                         5455588999999999999999999998   7899999999999999987653221         13


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCcccc
Q 017580          298 LGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~--~~sG~~~~~~~g~~~~  335 (369)
                      .+++.+|+|+|+.+++++..+.  ..+|..+..|+|+...
T Consensus       205 ~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~~~~~  244 (250)
T 3nyw_A          205 DEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKSIIEG  244 (250)
T ss_dssp             GGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHHHHC-
T ss_pred             cccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeecccccc
Confidence            3567899999999997665444  3456666666665543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.9e-41  Score=304.69  Aligned_cols=239  Identities=23%  Similarity=0.308  Sum_probs=203.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++|+++||||++|||+++|++|+++|++|++++| ++++++++.+++...  +.++.++++|++|+++++++++++.+ 
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVD-   78 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            56899999999999999999999999999999999 888888888887654  45788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||.++.       
T Consensus        79 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  145 (246)
T 2uvd_A           79 -----VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGV-------  145 (246)
T ss_dssp             -----HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhc-------
Confidence                 4578999999999863  345778999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+....... .......|
T Consensus       146 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~p  208 (246)
T 2uvd_A          146 -------------TGNPGQANYVAAKAGVIGLTKTSAKELA---SRNITVNAIAPGFIATDMTDVLDENIK-AEMLKLIP  208 (246)
T ss_dssp             -------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBGGGCSSCCCTTHH-HHHHHTCT
T ss_pred             -------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeccccCcchhhcCHHHH-HHHHhcCC
Confidence                         5567788999999999999999999998   789999999999999999765432211 11222346


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       209 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          209 AAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            678899999999999766432 25689999888875

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1e-41  Score=313.06  Aligned_cols=236  Identities=14%  Similarity=0.186  Sum_probs=200.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-------hHHHHHHHHHhhcCCCcEEEEEecCCChHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-------LLSETMADITSRNKDARLEAFQVDLSSFQSVL  130 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-------~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~  130 (369)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+       .+++..+++...  +.++.++++|++|+++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHH
Confidence            34578999999999999999999999999999999999987       466777777665  568999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          131 KFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       131 ~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                      ++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||..
T Consensus        82 ~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~  154 (285)
T 3sc4_A           82 AAVAKTVE------QFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPI  154 (285)
T ss_dssp             HHHHHHHH------HHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCC
T ss_pred             HHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChh
Confidence            99999998      5588999999999873  455789999999999999999999999999998876 78999999998


Q ss_pred             ccccccccCCCcccccccccccCCC-chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC-cccCCccccchhH
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSF  286 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG-~v~T~~~~~~~~~  286 (369)
                      +.                    .+. ++...|++||+|+++|+++|+.|++   +.||+||+|+|| .++|++.+.....
T Consensus       155 ~~--------------------~~~~~~~~~Y~asKaal~~~~~~la~e~~---~~gI~vn~v~PG~~v~t~~~~~~~~~  211 (285)
T 3sc4_A          155 RL--------------------EPKWLRPTPYMMAKYGMTLCALGIAEELR---DAGIASNTLWPRTTVATAAVQNLLGG  211 (285)
T ss_dssp             CC--------------------SGGGSCSHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEEECSSCBCCHHHHHHHTS
T ss_pred             hc--------------------cCCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeCCCccccHHHHhhccc
Confidence            87                    443 5668999999999999999999998   789999999999 6899986543211


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  333 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~  333 (369)
                              ..+++++.+|+|+|+.+++++......+|+.+..++|-.
T Consensus       212 --------~~~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          212 --------DEAMARSRKPEVYADAAYVVLNKPSSYTGNTLLCEDVLL  250 (285)
T ss_dssp             --------CCCCTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHHHHHH
T ss_pred             --------cccccCCCCHHHHHHHHHHHhCCcccccceEEEEcCchh
Confidence                    123567889999999999776554467888887765443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-41  Score=308.07  Aligned_cols=240  Identities=22%  Similarity=0.258  Sum_probs=203.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++.+|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   80 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVR-   80 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999998888888888654  45789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .++++|+||||||+.   .+..+.+.++|++++++|+.++++++++++|.|++++ .|+||++||..+.      
T Consensus        81 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------  148 (262)
T 1zem_A           81 -----DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGV------  148 (262)
T ss_dssp             -----HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------
T ss_pred             -----HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------
Confidence                 457899999999976   3445778999999999999999999999999998765 6899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------------
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------------  283 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-------------  283 (369)
                                    .+.++...|++||+++..++++++.|++   +.||+||+|+||+++|++.+..             
T Consensus       149 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  211 (262)
T 1zem_A          149 --------------KGPPNMAAYGTSKGAIIALTETAALDLA---PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYF  211 (262)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTS
T ss_pred             --------------cCCCCCchHHHHHHHHHHHHHHHHHHHH---hhCeEEEEEecCCcCcchhhhhccchhhhcccccc
Confidence                          6667788999999999999999999998   7899999999999999986542             


Q ss_pred             h-hHH-HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017580          284 P-SFL-SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  331 (369)
Q Consensus       284 ~-~~~-~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g  331 (369)
                      . ... .........|++++.+|+|+|+.+++++... ...+|+.+..++|
T Consensus       212 ~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          212 STDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             CSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             ccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            1 011 1111222346788999999999999766432 3568999887765

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.7e-41  Score=312.35  Aligned_cols=243  Identities=19%  Similarity=0.195  Sum_probs=202.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchH-HHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLL-SETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+.. +.+.+.+...  +.++.++++|++|+++++++++++
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999997654 3444444333  568999999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      .+      .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|.|++   .|+||++||..+.   
T Consensus       120 ~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~---  187 (291)
T 3ijr_A          120 VR------QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAY---  187 (291)
T ss_dssp             HH------HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHH---
T ss_pred             HH------HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhc---
Confidence            98      4588999999999863   3456789999999999999999999999999964   4799999999988   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++..............
T Consensus       188 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~  247 (291)
T 3ijr_A          188 -----------------EGNETLIDYSATKGAIVAFTRSLSQSLV---QKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG  247 (291)
T ss_dssp             -----------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSTHHHHHSCHHHHHHTT
T ss_pred             -----------------CCCCCChhHHHHHHHHHHHHHHHHHHHh---hcCEEEEEEeeCCCcCCcccccCCHHHHHHHH
Confidence                             6677888999999999999999999998   78999999999999999975432222222222


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ...|++++.+|+|+|+++++++... ...+|+.+..++|..+
T Consensus       248 ~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          248 SNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             TTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred             ccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence            3356778899999999999665433 3578999999998765

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-41  Score=304.71  Aligned_cols=245  Identities=21%  Similarity=0.255  Sum_probs=207.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-CCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +..+.++|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++...  +.++.++.+|++|.+++++++++
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHH
Confidence            34567899999999999999999999999999999988 7777788877777655  46789999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +.+      .++++|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||.++.   
T Consensus        85 ~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~---  154 (256)
T 3ezl_A           85 VKA------EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQ---  154 (256)
T ss_dssp             HHH------HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGG---
T ss_pred             HHH------hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhc---
Confidence            998      5689999999999874  445789999999999999999999999999998876 6899999999988   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       .+.++...|++||+|++.++++++.|++   +.||+|++|+||+|+|++.+...... .....
T Consensus       155 -----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~  213 (256)
T 3ezl_A          155 -----------------KGQFGQTNYSTAKAGIHGFTMSLAQEVA---TKGVTVNTVSPGYIGTDMVKAIRPDV-LEKIV  213 (256)
T ss_dssp             -----------------GSCSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSCHHH-HHHHH
T ss_pred             -----------------cCCCCCcccHHHHHHHHHHHHHHHHHHH---HhCCEEEEEEECcccCccccccCHHH-HHHHH
Confidence                             6778889999999999999999999998   78999999999999999987754322 22233


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ...+++++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       214 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          214 ATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence            4456778899999999999765432 3578999999988643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.9e-41  Score=307.43  Aligned_cols=238  Identities=21%  Similarity=0.257  Sum_probs=199.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+.+..            ...+..+++|++|+++++++++++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHH
Confidence            44578899999999999999999999999999999999987643            125678899999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|+||||||+..  +..+.+.+.|++++++|+.|+++++++++|.|++++ .|+||++||..+.    
T Consensus        76 ~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~----  144 (269)
T 3vtz_A           76 TK------KYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSY----  144 (269)
T ss_dssp             HH------HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT----
T ss_pred             HH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhc----
Confidence            98      5588999999999863  445778999999999999999999999999998765 6899999999988    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---------
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---------  285 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~---------  285 (369)
                                      .+.++...|++||+|+++++++++.|++   + +|+||+|+||+|+|++......         
T Consensus       145 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  204 (269)
T 3vtz_A          145 ----------------AATKNAAAYVTSKHALLGLTRSVAIDYA---P-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENA  204 (269)
T ss_dssp             ----------------SBCTTCHHHHHHHHHHHHHHHHHHHHHT---T-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTH
T ss_pred             ----------------cCCCCChhHHHHHHHHHHHHHHHHHHhc---C-CCEEEEEEECCCcCcchhhhhhccccccchh
Confidence                            6778889999999999999999999997   5 8999999999999998754321         


Q ss_pred             -HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCC
Q 017580          286 -FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSS  337 (369)
Q Consensus       286 -~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~  337 (369)
                       ...........|++++.+|+|+|+.+++++... ...+|+.+..++|.....+
T Consensus       205 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  258 (269)
T 3vtz_A          205 VERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSKLP  258 (269)
T ss_dssp             HHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCC
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCccccCC
Confidence             111222334457788999999999999765433 3678999999999876543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=6.5e-41  Score=303.65  Aligned_cols=243  Identities=21%  Similarity=0.287  Sum_probs=205.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.++.+|++|+++++++++++.+ 
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVAN-   82 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999888888887654  45789999999999999999999988 


Q ss_pred             HhccCCC-CCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMH-SSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~-~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .+ +++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+.      
T Consensus        83 -----~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------  150 (260)
T 2ae2_A           83 -----HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGA------  150 (260)
T ss_dssp             -----HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGT------
T ss_pred             -----HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------
Confidence                 55 78999999999863  345778999999999999999999999999998765 6899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H---HH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M---AF  292 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~---~~  292 (369)
                                    .+.++...|++||++++.++++++.|++   +.+|+||+|+||+++|++.+........ .   ..
T Consensus       151 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  213 (260)
T 2ae2_A          151 --------------LAVPYEAVYGATKGAMDQLTRCLAFEWA---KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKL  213 (260)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHH
T ss_pred             --------------cCCCCcchHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCCCCCcchhhhccChhhHHHHHHH
Confidence                          6667788999999999999999999998   7899999999999999986543211111 1   11


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ....|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       214 ~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          214 IDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             HHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            22235678899999999999765432 2568999998988654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1e-41  Score=310.47  Aligned_cols=247  Identities=23%  Similarity=0.267  Sum_probs=201.6

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-CCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      .+...+++|+++||||++|||+++|++|+++|++|++++ |+.+..++..+++...  +.++.++.+|++|+++++++++
T Consensus        18 ~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~   95 (269)
T 3gk3_A           18 GPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAE   95 (269)
T ss_dssp             ------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHH
T ss_pred             CchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHH
Confidence            344457899999999999999999999999999999998 5556666666666543  5678999999999999999999


Q ss_pred             HHHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      ++.+      .++++|+||||||+.  .+..+.+.+++++++++|+.+++.+++.++|.|++++ .|+||++||.++.  
T Consensus        96 ~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~--  166 (269)
T 3gk3_A           96 KVLA------DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGS--  166 (269)
T ss_dssp             HHHH------HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH--
T ss_pred             HHHH------HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhc--
Confidence            9998      457899999999987  3455789999999999999999999999999998766 6899999999887  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                                        .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|+|++.+...........
T Consensus       167 ------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  225 (269)
T 3gk3_A          167 ------------------RGAFGQANYASAKAGIHGFTKTLALETA---KRGITVNTVSPGYLATAMVEAVPQDVLEAKI  225 (269)
T ss_dssp             ------------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTTTC-------CCS
T ss_pred             ------------------cCCCCcchHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEecCcccchhhhhhchhHHHHHh
Confidence                              6778889999999999999999999998   7899999999999999998765432211112


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ....+++++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       226 ~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          226 LPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             GGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred             hhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence            22345677889999999999655433 2578999999988653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=303.36  Aligned_cols=253  Identities=16%  Similarity=0.114  Sum_probs=204.5

Q ss_pred             CCCCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~  133 (369)
                      ++..++++|++|||||+  +|||+++|++|+++|++|++++|+... .+..+++.+..+  ++.++++|++|++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFG--SELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTT--CCCEEECCTTCHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcC--CcEEEECCCCCHHHHHHHH
Confidence            34456889999999998  999999999999999999999999544 444455544432  4789999999999999999


Q ss_pred             HHHHHHHhccCCCCCccEEEecccccc------CCCC-CCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          134 DSLQQWLLDSDMHSSIQLLINNAGILA------TSSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       134 ~~i~~~~~~~~~~~~id~lv~nAG~~~------~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                      +++.+      .++++|+||||||+..      +..+ .+.+++++.+++|+.+++++++.++|.|++   .|+||++||
T Consensus        84 ~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS  154 (271)
T 3ek2_A           84 ASLKT------HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSY  154 (271)
T ss_dssp             HHHHH------HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEEC
T ss_pred             HHHHH------HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEec
Confidence            99998      6689999999999863      3344 889999999999999999999999999975   489999999


Q ss_pred             CcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017580          207 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  286 (369)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~  286 (369)
                      .++.                    .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|+|++.+.....
T Consensus       155 ~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~  211 (271)
T 3ek2_A          155 LGAE--------------------RAIPNYNTMGLAKAALEASVRYLAVSLG---AKGVRVNAISAGPIKTLAASGIKSF  211 (271)
T ss_dssp             GGGT--------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCC-----CCCHHH
T ss_pred             cccc--------------------cCCCCccchhHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCcccchhhhcccch
Confidence            9988                    7778889999999999999999999998   7899999999999999998876543


Q ss_pred             HHH-HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCCH
Q 017580          287 LSL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFNS  343 (369)
Q Consensus       287 ~~~-~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~~~d~  343 (369)
                      ... .......+++++.+|+|+|+.+++++... ...+|+.+..++|.........+.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~~~  270 (271)
T 3ek2_A          212 GKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAGLE  270 (271)
T ss_dssp             HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC----
T ss_pred             HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhhcc
Confidence            222 22334456788999999999999766532 4678999999999988766665443

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=6.5e-41  Score=308.59  Aligned_cols=244  Identities=20%  Similarity=0.199  Sum_probs=202.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-CCcchHHHHHHHHHhhcCCCcEEEEEecCCChH---------
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQ---------  127 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~---------  127 (369)
                      +.++++|+++||||++|||+++|++|+++|++|++++ |+.++++++.+++.+.. +.++.++++|+++++         
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCccccccccccc
Confidence            3457899999999999999999999999999999999 99998888888886333 457899999999999         


Q ss_pred             --------HHHHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCC--------------HHhHHHhhhhhhHHHHH
Q 017580          128 --------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLT--------------PEGYDQMMSTNYIGAFF  183 (369)
Q Consensus       128 --------~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~--------------~~~~~~~~~vN~~~~~~  183 (369)
                              +++++++++.+      .++++|+||||||+..  +..+.+              .+++++++++|+.++++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  156 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYT------HWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF  156 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHH
T ss_pred             ccccchHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHH
Confidence                    99999999988      4578999999999863  445667              89999999999999999


Q ss_pred             HHHHHhHhhhcCCC-----CCeEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhC
Q 017580          184 LTKLLLPLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  258 (369)
Q Consensus       184 l~~~~~~~~~~~~~-----~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~  258 (369)
                      ++++++|.|++++.     .|+||++||..+.                    .+.++...|++||+++.+|+++|+.|++
T Consensus       157 l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~  216 (291)
T 1e7w_A          157 LIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN--------------------QPLLGYTIYTMAKGALEGLTRSAALELA  216 (291)
T ss_dssp             HHHHHHHHHHTSCGGGSCSCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHhcCCCCCCCCcEEEEEechhhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999987541     4899999999988                    6778889999999999999999999998


Q ss_pred             CCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          259 LDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       259 ~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                         +.+|+||+|+||+|+|++ + .+.. .........|++ ++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       217 ---~~gI~vn~v~PG~v~T~~-~-~~~~-~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          217 ---PLQIRVNGVGPGLSVLVD-D-MPPA-VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             ---GGTEEEEEEEESSBCCGG-G-SCHH-HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---hcCeEEEEEeeCCccCCc-c-CCHH-HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence               789999999999999999 5 3211 111112223666 8889999999999766532 3578999999988654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=4.3e-41  Score=304.82  Aligned_cols=242  Identities=23%  Similarity=0.256  Sum_probs=198.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch-HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++ ++++.+++.+.. +.++.++.+|++|+++++++++++.+ 
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~-   79 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVR-   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            568999999999999999999999999999999999887 888877776542 34688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+.       
T Consensus        80 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  146 (260)
T 1x1t_A           80 -----QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGL-------  146 (260)
T ss_dssp             -----HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhC-------
Confidence                 4578999999999863  345678999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---------HH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---------LS  288 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~---------~~  288 (369)
                                   .+.++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+.....         ..
T Consensus       147 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  210 (260)
T 1x1t_A          147 -------------VASANKSAYVAAKHGVVGFTKVTALETA---GQGITANAICPGWVRTPLVEKQISALAEKNGVDQET  210 (260)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCC--------------------
T ss_pred             -------------cCCCCCchHHHHHHHHHHHHHHHHHHhc---cCCEEEEEEeecCccCchHHHhhhhhccccCCchHH
Confidence                         6667888999999999999999999998   7899999999999999997653210         00


Q ss_pred             H-HHH-HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          289 L-MAF-TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       289 ~-~~~-~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      . ... ....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          211 AARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             ----CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence            0 011 22246678899999999999766432 356899999888854

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=4.2e-41  Score=304.95  Aligned_cols=245  Identities=22%  Similarity=0.283  Sum_probs=195.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ...++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++.+|++|.++++++++++
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~   77 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAA   77 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHH
Confidence            344678999999999999999999999999999999999999888887766     567899999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC---CCCeEEEEcCCccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP---VPSRIVNVTSFTHR  210 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~---~~g~IV~vsS~~~~  210 (369)
                      .+      .++++|+||||||+..   +..+.+.+++++++++|+.+++++++.++|.|++++   ..++||++||..+.
T Consensus        78 ~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~  151 (261)
T 3n74_A           78 LS------KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG  151 (261)
T ss_dssp             HH------HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT
T ss_pred             HH------hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc
Confidence            88      4578999999999864   234568999999999999999999999999998652   24789999999988


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---H
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---L  287 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~---~  287 (369)
                                          .+.+....|++||+|++.|+++++.|++   +.+|+|++|+||+++|++.+.....   .
T Consensus       152 --------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~  208 (261)
T 3n74_A          152 --------------------RPRPNLAWYNATKGWVVSVTKALAIELA---PAKIRVVALNPVAGETPLLTTFMGEDSEE  208 (261)
T ss_dssp             --------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC-----------------
T ss_pred             --------------------CCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccChhhhhhcccCcHH
Confidence                                7778889999999999999999999998   7899999999999999998754211   1


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      .........|++++.+|+|+|+.+++++... ...+|+.+..++|..+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          209 IRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIG  257 (261)
T ss_dssp             --------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC-
T ss_pred             HHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccC
Confidence            1122233456778999999999999655322 25689999999998764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.7e-41  Score=304.90  Aligned_cols=238  Identities=20%  Similarity=0.321  Sum_probs=189.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|+++++++++++.+  
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~--   77 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVD--   77 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            46899999999999999999999999999999999999999999888765  56789999999999999999999998  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.        
T Consensus        78 ----~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~--------  144 (264)
T 3tfo_A           78 ----TWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGAL--------  144 (264)
T ss_dssp             ----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             ----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHc--------
Confidence                4588999999999863  445789999999999999999999999999998766 6999999999988        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++...|++||+|+++|+++++.|+    + +|+||+|+||+|+|++.+...........  ....
T Consensus       145 ------------~~~~~~~~Y~asKaal~~l~~~la~e~----~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~  205 (264)
T 3tfo_A          145 ------------SVVPTAAVYCATKFAVRAISDGLRQES----T-NIRVTCVNPGVVESELAGTITHEETMAAM--DTYR  205 (264)
T ss_dssp             ------------CCCTTCHHHHHHHHHHHHHHHHHHHHC----S-SEEEEEEEECCC-----------------------
T ss_pred             ------------ccCCCChhHHHHHHHHHHHHHHHHHhC----C-CCEEEEEecCCCcCcccccccchhHHHHH--Hhhh
Confidence                        777888999999999999999999996    4 99999999999999998764332111110  0111


Q ss_pred             hCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017580          299 GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  334 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~  334 (369)
                      ....+|+|+|+++++++..+. ..+|...+.+.+.+.
T Consensus       206 ~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~p~~~~~  242 (264)
T 3tfo_A          206 AIALQPADIARAVRQVIEAPQSVDTTEITIRPTASGN  242 (264)
T ss_dssp             --CCCHHHHHHHHHHHHHSCTTEEEEEEEEEECC---
T ss_pred             ccCCCHHHHHHHHHHHhcCCccCccceEEEecCcccc
Confidence            235799999999998776554 345666666655554

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=7.1e-41  Score=298.87  Aligned_cols=210  Identities=20%  Similarity=0.219  Sum_probs=179.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++|+++++++++++.+   
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~---   73 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVE---   73 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHH---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHH---
Confidence            4789999999999999999999999999999999999888888777     23689999999999999999999988   


Q ss_pred             ccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++  ++||++||.++.         
T Consensus        74 ---~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~---------  139 (235)
T 3l6e_A           74 ---WGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQ---------  139 (235)
T ss_dssp             ---HHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECC---------
T ss_pred             ---hcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhc---------
Confidence               4588999999999863  455789999999999999999999999999998875  699999999988         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+.++...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++.+....          .+..
T Consensus       140 -----------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~  195 (235)
T 3l6e_A          140 -----------VGKANESLYCASKWGMRGFLESLRAELK---DSPLRLVNLYPSGIRSEFWDNTDH----------VDPS  195 (235)
T ss_dssp             -----------SSCSSHHHHHHHHHHHHHHHHHHHHHTT---TSSEEEEEEEEEEECCCC--------------------
T ss_pred             -----------CCCCCCcHHHHHHHHHHHHHHHHHHHhh---ccCCEEEEEeCCCccCcchhccCC----------CCCc
Confidence                       7778899999999999999999999998   889999999999999999765422          1233


Q ss_pred             CCCCHHHHHHHHHHHhcC
Q 017580          300 LLQSPEKGINSVLDAALA  317 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~  317 (369)
                      ++.+|+|+|+.+++++..
T Consensus       196 ~~~~pedvA~~v~~l~~~  213 (235)
T 3l6e_A          196 GFMTPEDAAAYMLDALEA  213 (235)
T ss_dssp             -CBCHHHHHHHHHHHTCC
T ss_pred             CCCCHHHHHHHHHHHHhC
Confidence            678999999999966543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=4.3e-41  Score=304.32  Aligned_cols=238  Identities=19%  Similarity=0.250  Sum_probs=190.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++.   .+++     +.++.++++|++|+++++++++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL-----GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999965432   2222     5678999999999999999999886


Q ss_pred             HHHhccCCCCCccEEEeccccccC------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-------CCCCeEEEE
Q 017580          138 QWLLDSDMHSSIQLLINNAGILAT------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-------PVPSRIVNV  204 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-------~~~g~IV~v  204 (369)
                      +       ++++|+||||||+...      ..+.+.++|++++++|+.|+++++++++|.|+++       +..|+||++
T Consensus        76 ~-------~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  148 (257)
T 3tl3_A           76 T-------MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINT  148 (257)
T ss_dssp             H-------HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEE
T ss_pred             H-------hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEE
Confidence            5       3789999999998632      2358899999999999999999999999999872       226899999


Q ss_pred             cCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017580          205 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  284 (369)
Q Consensus       205 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~  284 (369)
                      ||.++.                    .+.++...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++.+..+
T Consensus       149 sS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~  205 (257)
T 3tl3_A          149 ASVAAF--------------------DGQIGQAAYSASKGGVVGMTLPIARDLA---SHRIRVMTIAPGLFDTPLLASLP  205 (257)
T ss_dssp             CCCC----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTC---C
T ss_pred             cchhhc--------------------CCCCCCccHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEecCccChhhhhcc
Confidence            999988                    7778899999999999999999999998   78999999999999999987754


Q ss_pred             hHHHHHHHHHHHHh-hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          285 SFLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       285 ~~~~~~~~~~~~~~-~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      .... .......+. +++.+|+|+|+.+++++.. +..+|+.+..++|....
T Consensus       206 ~~~~-~~~~~~~~~~~r~~~p~dva~~v~~l~s~-~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          206 EEAR-ASLGKQVPHPSRLGNPDEYGALAVHIIEN-PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHH-HHHHHTSSSSCSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTTC---
T ss_pred             HHHH-HHHHhcCCCCCCccCHHHHHHHHHHHhcC-CCCCCCEEEECCCccCC
Confidence            4322 122223344 7889999999999987644 67899999999987654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=4.1e-41  Score=313.54  Aligned_cols=246  Identities=22%  Similarity=0.266  Sum_probs=202.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC------------cchHHHHHHHHHhhcCCCcEEEEEecCC
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLS  124 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls  124 (369)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+            .++++++.+++...  +.++.++++|++
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~  117 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVR  117 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCC
Confidence            3456889999999999999999999999999999999886            55666666666554  567999999999


Q ss_pred             ChHHHHHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEE
Q 017580          125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV  202 (369)
Q Consensus       125 ~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV  202 (369)
                      |+++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++..|+||
T Consensus       118 d~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv  191 (317)
T 3oec_A          118 DLASLQAVVDEALA------EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVI  191 (317)
T ss_dssp             CHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEE
T ss_pred             CHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            99999999999998      5588999999999873  456789999999999999999999999999998775468999


Q ss_pred             EEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc
Q 017580          203 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE  282 (369)
Q Consensus       203 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~  282 (369)
                      ++||.++.                    .+.++...|++||+|++.|+++|+.|++   +.||+||+|+||+|+|++...
T Consensus       192 ~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~  248 (317)
T 3oec_A          192 FVSSTVGL--------------------RGAPGQSHYAASKHGVQGLMLSLANEVG---RHNIRVNSVNPGAVNTEMALN  248 (317)
T ss_dssp             EECCGGGS--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSHHHHC
T ss_pred             EECcHHhc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCcccCccccc
Confidence            99999988                    7778889999999999999999999998   789999999999999998653


Q ss_pred             chhHH------------HHHH---HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          283 VPSFL------------SLMA---FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       283 ~~~~~------------~~~~---~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .....            ....   .....| +++.+|+|+|+++++++... ...+|+.+.+++|...
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          249 EKLLKMFLPHLENPTREDAAELFSQLTLLP-IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             HHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhhhhhhhccccchhHHHHHHhhhccCC-CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            21100            0000   000011 46679999999999544322 2568999999998764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=4.8e-41  Score=307.94  Aligned_cols=239  Identities=21%  Similarity=0.202  Sum_probs=198.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++++++++++++++.+ 
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   75 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLA-   75 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            367999999999999999999999999999999999988877766553     46789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccccCC-------CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~-------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                           .++++|+||||||+....       .+.+.+.|++++++|+.|+++++++++|.|++++  |+||++||..+.  
T Consensus        76 -----~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~--  146 (281)
T 3zv4_A           76 -----AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR--GSVVFTISNAGF--  146 (281)
T ss_dssp             -----HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGT--
T ss_pred             -----hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CeEEEEecchhc--
Confidence                 458899999999986321       2345678999999999999999999999998764  899999999988  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-------
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------  285 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-------  285 (369)
                                        .+.++...|++||+|+++++++|+.|++   +. |+||+|+||+|+|+|......       
T Consensus       147 ------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~  204 (281)
T 3zv4_A          147 ------------------YPNGGGPLYTATKHAVVGLVRQMAFELA---PH-VRVNGVAPGGMNTDLRGPSSLGLSEQSI  204 (281)
T ss_dssp             ------------------SSSSSCHHHHHHHHHHHHHHHHHHHHHT---TT-SEEEEEEECSSCC--CCCTTCC------
T ss_pred             ------------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---CC-CEEEEEECCcCcCCcccccccccccccc
Confidence                              7778889999999999999999999997   55 999999999999998754211       


Q ss_pred             --HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCcccc
Q 017580          286 --FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       286 --~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~~~g~~~~  335 (369)
                        ...........|++|+.+|+|+|+.+++++..+  ...+|+.+.+++|....
T Consensus       205 ~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          205 SSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             --CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGC
T ss_pred             cchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCccc
Confidence              001122333457889999999999999766522  24799999999998664

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=6.2e-41  Score=303.78  Aligned_cols=242  Identities=19%  Similarity=0.214  Sum_probs=201.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++....++.++.++.+|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-   82 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD-   82 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH-
Confidence            3678999999999999999999999999999999999988888888876543334789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++ +|+||||||+..  +..+.+.++|++.+++|+.|++++++.++|.|++++ .|+||++||..+.       
T Consensus        83 -----~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  148 (260)
T 2z1n_A           83 -----LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLL-------  148 (260)
T ss_dssp             -----TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhc-------
Confidence                 667 999999999763  345778999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc----------chhHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE----------VPSFL  287 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~----------~~~~~  287 (369)
                                   .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+.          .+...
T Consensus       149 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  212 (260)
T 2z1n_A          149 -------------RPWQDLALSNIMRLPVIGVVRTLALELA---PHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE  212 (260)
T ss_dssp             -------------SCCTTBHHHHHHTHHHHHHHHHHHHHHG---GGTEEEEEEEECHHHHCCCC----------------
T ss_pred             -------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH
Confidence                         6677888999999999999999999998   789999999999999999762          11110


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .........|++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       213 ~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          213 ALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             -------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            0111112235678889999999999665432 35689999888874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-40  Score=301.27  Aligned_cols=234  Identities=23%  Similarity=0.260  Sum_probs=198.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ||+++||||++|||+++|++|+++|  ++|++++|++++++++.+++     +.++.++++|++|+++++++++++.+  
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~--   74 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVK--   74 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHH--
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHH--
Confidence            6899999999999999999999985  78999999998888877765     45789999999999999999999998  


Q ss_pred             hccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          141 LDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                          .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|.|++++  |+||++||.++.       
T Consensus        75 ----~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~-------  141 (254)
T 3kzv_A           75 ----GHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACN-------  141 (254)
T ss_dssp             ----HHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCC-------
T ss_pred             ----hcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhc-------
Confidence                558899999999985   3455789999999999999999999999999998765  899999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--------HHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--------FLSL  289 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--------~~~~  289 (369)
                                   .+.++...|++||+++++++++++.|+     ++|+||+|+||+|+|++.+....        ....
T Consensus       142 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~-----~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  203 (254)
T 3kzv_A          142 -------------MYFSSWGAYGSSKAALNHFAMTLANEE-----RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQL  203 (254)
T ss_dssp             -------------CSSCCSHHHHHHHHHHHHHHHHHHHHC-----TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHH
T ss_pred             -------------cCCCCcchHHHHHHHHHHHHHHHHhhc-----cCcEEEEEeCCcccchhHHHhhcccCccccCHHHH
Confidence                         777888999999999999999999997     47999999999999999865421        2222


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCccc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTV  334 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~~~g~~~  334 (369)
                      .......|++++.+|+|+|+.+++++...  ...+|+++..+++...
T Consensus       204 ~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          204 KMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             HHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence            33445567889999999999999776544  3578999998887654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.9e-40  Score=301.05  Aligned_cols=244  Identities=23%  Similarity=0.292  Sum_probs=204.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.... +.++.++++|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~-   81 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS-   81 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999999988888888776542 34688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+.       
T Consensus        82 -----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  148 (263)
T 3ai3_A           82 -----SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAV-------  148 (263)
T ss_dssp             -----HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhc-------
Confidence                 4578999999999863  455788999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---------HHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---------FLS  288 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~---------~~~  288 (369)
                                   .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+....         ...
T Consensus       149 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  212 (263)
T 3ai3_A          149 -------------QPLWYEPIYNVTKAALMMFSKTLATEVI---KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKG  212 (263)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHH
T ss_pred             -------------CCCCCcchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHH
Confidence                         6667788999999999999999999998   789999999999999998654311         111


Q ss_pred             H-HHHHHH-HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          289 L-MAFTVL-KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       289 ~-~~~~~~-~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      . ...... .|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       213 ~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          213 YLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             HHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence            1 111122 46678899999999999665432 2467999988888653

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.5e-41  Score=304.97  Aligned_cols=239  Identities=22%  Similarity=0.249  Sum_probs=202.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++||++|||||++|||+++|++|+++|++|++++++ .+.++++.+++.+.  +.++.++.+|++|+++++++++++.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998665 46677777777665  5678999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++   .|+||++||..+..    
T Consensus       105 ~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~----  171 (271)
T 3v2g_A          105 E------ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAEL----  171 (271)
T ss_dssp             H------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTC----
T ss_pred             H------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhcc----
Confidence            8      4588999999999863  4457899999999999999999999999999965   48999999987651    


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.........  .....
T Consensus       172 ---------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~  231 (271)
T 3v2g_A          172 ---------------VPWPGISLYSASKAALAGLTKGLARDLG---PRGITVNIVHPGSTDTDMNPADGDHAE--AQRER  231 (271)
T ss_dssp             ---------------CCSTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSSSSCSSCSSHH--HHHHT
T ss_pred             ---------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEecCCCcCCcccccchhHH--HHHhc
Confidence                           3467889999999999999999999998   789999999999999999865433221  22334


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .|++++.+|+|+|+.+++++... ...+|+.+.+++|.
T Consensus       232 ~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          232 IATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            57788999999999999665432 36789999998885

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=2.3e-40  Score=299.83  Aligned_cols=241  Identities=22%  Similarity=0.233  Sum_probs=202.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH---CCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~---~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ++++|+++||||++|||+++|++|++   +|++|++++|++++++++.+++.+.+++.++.++++|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999   899999999999999999888877655678999999999999999999998


Q ss_pred             HHHHhccCCCCCcc--EEEeccccccC----CCC-CCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-CCCCeEEEEcCCc
Q 017580          137 QQWLLDSDMHSSIQ--LLINNAGILAT----SSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTSFT  208 (369)
Q Consensus       137 ~~~~~~~~~~~~id--~lv~nAG~~~~----~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~~g~IV~vsS~~  208 (369)
                      .+.+    .++++|  +||||||+..+    ..+ .+.+++++++++|+.|+++++++++|.|+++ ++.|+||++||.+
T Consensus        83 ~~~~----~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
T 1oaa_A           83 RELP----RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC  158 (259)
T ss_dssp             HHSC----CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred             Hhcc----ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCch
Confidence            7622    346788  99999998632    334 6889999999999999999999999999876 1258999999999


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---  285 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~---  285 (369)
                      +.                    .+.++...|++||+++++++++++.|++   +  |+||+|+||+++|++.+....   
T Consensus       159 ~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~--i~vn~v~PG~v~T~~~~~~~~~~~  213 (259)
T 1oaa_A          159 AL--------------------QPYKGWGLYCAGKAARDMLYQVLAAEEP---S--VRVLSYAPGPLDNDMQQLARETSK  213 (259)
T ss_dssp             GT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHCT---T--EEEEEEECCSBSSHHHHHHHHHCS
T ss_pred             hc--------------------CCCCCccHHHHHHHHHHHHHHHHHhhCC---C--ceEEEecCCCcCcchHHHHhhccC
Confidence            88                    6778889999999999999999999985   3  999999999999999765321   


Q ss_pred             -HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017580          286 -FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  329 (369)
Q Consensus       286 -~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~  329 (369)
                       ...........|++++.+|+|+|+.+++++......+|+.+..+
T Consensus       214 ~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~vd  258 (259)
T 1oaa_A          214 DPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDFY  258 (259)
T ss_dssp             CHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEETT
T ss_pred             ChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEEecc
Confidence             11112223345678899999999999987765456788887654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.5e-40  Score=301.29  Aligned_cols=244  Identities=21%  Similarity=0.279  Sum_probs=205.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888887654  45788999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                            .++++|+||||||+.   .+..+.+.++|++++++|+.++++++++++|.|++++ .|+||++||..+.     
T Consensus        88 ------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-----  155 (260)
T 2zat_A           88 ------LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAY-----  155 (260)
T ss_dssp             ------HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT-----
T ss_pred             ------HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhc-----
Confidence                  457899999999975   3445778999999999999999999999999998765 6899999999887     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAFTV  294 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~  294 (369)
                                     .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+... ..........
T Consensus       156 ---------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  217 (260)
T 2zat_A          156 ---------------HPFPNLGPYNVSKTALLGLTKNLAVELA---PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKE  217 (260)
T ss_dssp             ---------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHH
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEECcccCccchhcccChHHHHHHHh
Confidence                           6677888999999999999999999998   78999999999999999865421 1111112223


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ..|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       218 ~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          218 SLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             HHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCC
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCccc
Confidence            346778899999999999654332 2458999998888654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.5e-41  Score=305.45  Aligned_cols=241  Identities=22%  Similarity=0.302  Sum_probs=202.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++...  + ++.++.+|++|+++++++++++.+
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~~  101 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALGE  101 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888888777542  2 788999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC---CCeEEEEcCCcccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV---PSRIVNVTSFTHRNVF  213 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~---~g~IV~vsS~~~~~~~  213 (369)
                            .++++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|.|++++.   .|+||++||.++.   
T Consensus       102 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~---  172 (276)
T 2b4q_A          102 ------LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI---  172 (276)
T ss_dssp             ------HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT---
T ss_pred             ------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc---
Confidence                  5689999999999863  4457789999999999999999999999999987641   2899999999887   


Q ss_pred             cccCCCcccccccccccCCCchhh-hhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCAR-IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                                       .+.+... .|++||++++.++++++.|++   +.+|+||+|+||+++|++.+...... ....
T Consensus       173 -----------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~  231 (276)
T 2b4q_A          173 -----------------SAMGEQAYAYGPSKAALHQLSRMLAKELV---GEHINVNVIAPGRFPSRMTRHIANDP-QALE  231 (276)
T ss_dssp             -----------------CCCCCSCTTHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCSTTTHHHHHCH-HHHH
T ss_pred             -----------------CCCCCCccccHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeccCcCcchhhcchhH-HHHH
Confidence                             4555666 899999999999999999998   78999999999999999976532111 1111


Q ss_pred             HH--HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          293 TV--LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       293 ~~--~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ..  ..|++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       232 ~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          232 ADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            11  346678899999999999766443 25789999888875

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=8.3e-41  Score=303.84  Aligned_cols=230  Identities=20%  Similarity=0.268  Sum_probs=193.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..        ..++.++.+|++|.++++++++++.+ 
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~-   83 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN--------LPNTLCAQVDVTDKYTFDTAITRAEK-   83 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC--------CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh--------cCCceEEEecCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999976554321        34788999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+.  .+..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        84 -----~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~-------  150 (266)
T 3p19_A           84 -----IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGK-------  150 (266)
T ss_dssp             -----HHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT-------
T ss_pred             -----HCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhC-------
Confidence                 458899999999986  3455789999999999999999999999999998766 6899999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH-HHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-FTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~  296 (369)
                                   .+.++...|++||+++++++++++.|++   +.||+||+|+||+|+|++.+.......... .....
T Consensus       151 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  214 (266)
T 3p19_A          151 -------------KTFPDHAAYCGTKFAVHAISENVREEVA---ASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV  214 (266)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH
T ss_pred             -------------CCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc
Confidence                         7778889999999999999999999998   789999999999999999876543222111 12234


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCCC-CcccEEe
Q 017580          297 LLGLLQSPEKGINSVLDAALAPPE-TSGVYFF  327 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~~-~sG~~~~  327 (369)
                      +++++.+|+|+|+++++++..+.. ..++...
T Consensus       215 ~~~r~~~pedvA~av~~l~~~~~~~~~~~i~i  246 (266)
T 3p19_A          215 DMGGVLAADDVARAVLFAYQQPQNVCIREIAL  246 (266)
T ss_dssp             HTTCCBCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             cccCCCCHHHHHHHHHHHHcCCCCccceeeEE
Confidence            788999999999999987766542 2344443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=8.8e-41  Score=302.09  Aligned_cols=240  Identities=23%  Similarity=0.308  Sum_probs=202.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.++.+|++|+++++++++++.+    
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~----   75 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARK----   75 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH----
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH----
Confidence            689999999999999999999999999999999998888888887654  45788999999999999999999988    


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        .++++|+||||||+..  +..+.+.+++++++++|+.+++++++.++|.|++++..|+||++||..+.          
T Consensus        76 --~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------  143 (256)
T 1geg_A           76 --TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH----------  143 (256)
T ss_dssp             --HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----------
T ss_pred             --HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc----------
Confidence              5689999999999863  44577899999999999999999999999999865324899999999887          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HHHHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FLSLM  290 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~~~~~  290 (369)
                                .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+....          .....
T Consensus       144 ----------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  210 (256)
T 1geg_A          144 ----------VGNPELAVYSSSKFAVRGLTQTAARDLA---PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTA  210 (256)
T ss_dssp             ----------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHHHH---HcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHH
Confidence                      6677888999999999999999999998   789999999999999998654311          00011


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ......|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          211 EFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            1111235678899999999999766432 256899999888854

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.8e-40  Score=303.52  Aligned_cols=244  Identities=23%  Similarity=0.272  Sum_probs=205.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+.++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.+|++|+++++++++++
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   93 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAV   93 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHH
Confidence            344678999999999999999999999999999999999998888888888654  457889999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHh--hhcCCCCCeEEEEcCCccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL--LKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.  |++++ .|+||++||.++.  
T Consensus        94 ~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~--  164 (277)
T 2rhc_B           94 VE------RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGK--  164 (277)
T ss_dssp             HH------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGT--
T ss_pred             HH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccc--
Confidence            88      5688999999999863  3456789999999999999999999999999  87654 5899999999887  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-------
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------  285 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-------  285 (369)
                                        .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++......       
T Consensus       165 ------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~  223 (277)
T 2rhc_B          165 ------------------QGVVHAAPYSASKHGVVGFTKALGLELA---RTGITVNAVCPGFVETPMAASVREHYSDIWE  223 (277)
T ss_dssp             ------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTEEEEEEEEECSBCSHHHHHHHHHHHHHHT
T ss_pred             ------------------cCCCCCccHHHHHHHHHHHHHHHHHHHH---HhCcEEEEEecCcCcCchhhhhhhhcccccc
Confidence                              6677888999999999999999999998   789999999999999998654311       


Q ss_pred             ---HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          286 ---FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       286 ---~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                         ...........|++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       224 ~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          224 VSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             CCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence               011111222346678899999999999765432 25689999888875

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.2e-40  Score=305.29  Aligned_cols=243  Identities=14%  Similarity=0.114  Sum_probs=199.4

Q ss_pred             CCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        58 ~~~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +.+++||++|||||+  +|||+++|++|+++|++|++++|+++..+ ..+++.+..  .++.++.+|++|++++++++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~  102 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RVEPLAEEL--GAFVAGHCDVADAASIDAVFET  102 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HHHHHHHHH--TCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhc--CCceEEECCCCCHHHHHHHHHH
Confidence            346889999999999  55999999999999999999999964433 334444333  3588999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      +.+      .++++|+||||||+..      +..+.+.++|++.+++|+.++++++++++|.|++   .|+||++||.++
T Consensus       103 ~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~  173 (293)
T 3grk_A          103 LEK------KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGA  173 (293)
T ss_dssp             HHH------HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGG
T ss_pred             HHH------hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhh
Confidence            998      6689999999999863      4457899999999999999999999999999975   489999999998


Q ss_pred             cccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-H
Q 017580          210 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-S  288 (369)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-~  288 (369)
                      .                    .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+...... .
T Consensus       174 ~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~  230 (293)
T 3grk_A          174 E--------------------KVMPNYNVMGVAKAALEASVKYLAVDLG---PQNIRVNAISAGPIKTLAASGIGDFRYI  230 (293)
T ss_dssp             T--------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCC------CCHHHH
T ss_pred             c--------------------cCCCchHHHHHHHHHHHHHHHHHHHHHh---HhCCEEEEEecCCCcchhhhcccchHHH
Confidence            8                    6778889999999999999999999998   78999999999999999987654322 2


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ........|++++.+|+|+|+++++++... ...+|+.+..++|....
T Consensus       231 ~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          231 LKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             HHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCcccC
Confidence            223334467889999999999999765432 36789999999998765

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.2e-40  Score=300.51  Aligned_cols=235  Identities=22%  Similarity=0.282  Sum_probs=192.8

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      .++.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++.+|+++++++++++++
T Consensus        22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   99 (262)
T 3rkr_A           22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATG   99 (262)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHH
T ss_pred             chhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHH
Confidence            3466789999999999999999999999999999999999999999998888765  56799999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      +.+      .++++|+||||||+.   .+..+.+.+++++++++|+.|++.+++.++|.|++++ .|+||++||.++.  
T Consensus       100 ~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~--  170 (262)
T 3rkr_A          100 VLA------AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGK--  170 (262)
T ss_dssp             HHH------HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSS--
T ss_pred             HHH------hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhc--
Confidence            988      558899999999983   3445789999999999999999999999999998776 7899999999988  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                                        .+.++...|++||+|+++++++++.|++   +.||+|++|+||+|+|++.......      
T Consensus       171 ------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~------  223 (262)
T 3rkr_A          171 ------------------NPVADGAAYTASKWGLNGLMTSAAEELR---QHQVRVSLVAPGSVRTEFGVGLSAK------  223 (262)
T ss_dssp             ------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCC-----------------
T ss_pred             ------------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCCCcCCcccccccc------
Confidence                              7778889999999999999999999998   7899999999999999997654321      


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  331 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g  331 (369)
                         .+..++.+|+|+|+.+++++.... ...|+.+..+.+
T Consensus       224 ---~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~p~~  260 (262)
T 3rkr_A          224 ---KSALGAIEPDDIADVVALLATQADQSFISEVLVRPTL  260 (262)
T ss_dssp             --------CCCHHHHHHHHHHHHTCCTTCCEEEEEEECCC
T ss_pred             ---cccccCCCHHHHHHHHHHHhcCccccccCcEEecccc
Confidence               233467899999999997665443 445666654443

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=6.7e-41  Score=303.21  Aligned_cols=240  Identities=21%  Similarity=0.271  Sum_probs=201.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch--HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL--LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +|+++||||++|||+++|++|+++|++|++++|+.++  ++++.+++...  +.++.++.+|++|+++++++++++.+  
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~--   77 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAE--   77 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH--
Confidence            6899999999999999999999999999999999887  77777777654  45789999999999999999999988  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|+||||||+..  +..+.+.+++++++++|+.++++++++++|.|++++..|+||++||..+.        
T Consensus        78 ----~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------  145 (258)
T 3a28_C           78 ----KLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAI--------  145 (258)
T ss_dssp             ----HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGT--------
T ss_pred             ----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhc--------
Confidence                4578999999999863  34567899999999999999999999999999876522899999999887        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FLS  288 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~~~  288 (369)
                                  .+.++...|++||++++.++++++.|++   +.+|+||+|+||+++|++.+....          ...
T Consensus       146 ------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  210 (258)
T 3a28_C          146 ------------QGFPILSAYSTTKFAVRGLTQAAAQELA---PKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGEN  210 (258)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHH
T ss_pred             ------------cCCCCchhHHHHHHHHHHHHHHHHHHHH---hhCeEEEEEECCccCChhhhhhhhhhccccCCchHHH
Confidence                        6677888999999999999999999998   789999999999999998654210          010


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ........|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          211 FKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             HHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             HHHHHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence            111112236678899999999999765432 257899999888854

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-40  Score=298.81  Aligned_cols=235  Identities=20%  Similarity=0.234  Sum_probs=198.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++       .+.++.+|++|+++++++++++.+  
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~--   73 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA--   73 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCEEEEecCCCHHHHHHHHHHHHH--
Confidence            57899999999999999999999999999999999987776655433       278899999999999999999988  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|.|++++ .|+||++||.+ .        
T Consensus        74 ----~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~--------  139 (245)
T 1uls_A           74 ----HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-Y--------  139 (245)
T ss_dssp             ----HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-G--------
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-h--------
Confidence                4588999999999863  345778999999999999999999999999998765 68999999988 6        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++...|++||+++..++++++.|++   +.||+||+|+||+++|++.+..+... ........|+
T Consensus       140 ------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~p~  203 (245)
T 1uls_A          140 ------------LGNLGQANYAASMAGVVGLTRTLALELG---RWGIRVNTLAPGFIETRMTAKVPEKV-REKAIAATPL  203 (245)
T ss_dssp             ------------GCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTTSSSCHHH-HHHHHHTCTT
T ss_pred             ------------cCCCCchhHHHHHHHHHHHHHHHHHHHh---HhCeEEEEEEeCcCcCcchhhcCHHH-HHHHHhhCCC
Confidence                        5567778999999999999999999998   78999999999999999977543321 1112222356


Q ss_pred             hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          299 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      +++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       204 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          204 GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTI  240 (245)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            78899999999999766543 3568999999988654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=6.5e-41  Score=305.99  Aligned_cols=227  Identities=19%  Similarity=0.281  Sum_probs=190.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch-------HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-------LSETMADITSRNKDARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~  132 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...  +.++.++++|++|+++++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHH
Confidence            5789999999999999999999999999999999999764       56666666555  56899999999999999999


Q ss_pred             HHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                      ++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||..+.
T Consensus        81 ~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  153 (274)
T 3e03_A           81 VAATVD------TFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSL  153 (274)
T ss_dssp             HHHHHH------HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCC
T ss_pred             HHHHHH------HcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhc
Confidence            999998      4588999999999863  345778999999999999999999999999998876 7999999999887


Q ss_pred             ccccccCCCcccccccccccCC--CchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC-cccCCccccchhHH
Q 017580          211 NVFNAQVNNETITGKFFLRSKC--YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFL  287 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG-~v~T~~~~~~~~~~  287 (369)
                                          .+  .++...|++||+|+++|+++++.|++   +.||+||+|+|| +++|++.+..+.  
T Consensus       154 --------------------~~~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn~v~PG~~v~T~~~~~~~~--  208 (274)
T 3e03_A          154 --------------------NPAWWGAHTGYTLAKMGMSLVTLGLAAEFG---PQGVAINALWPRTVIATDAINMLPG--  208 (274)
T ss_dssp             --------------------CHHHHHHCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEECSBCBCC-------C--
T ss_pred             --------------------CCCCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCEEEEEEECCcccccchhhhccc--
Confidence                                44  56788999999999999999999998   789999999999 689998743321  


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeC
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFG  328 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~  328 (369)
                              .+..++.+|+|+|+.+++++... ...+|+++.+
T Consensus       209 --------~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~~  242 (274)
T 3e03_A          209 --------VDAAACRRPEIMADAAHAVLTREAAGFHGQFLID  242 (274)
T ss_dssp             --------CCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEEH
T ss_pred             --------ccccccCCHHHHHHHHHHHhCccccccCCeEEEc
Confidence                    12235679999999999766543 3568999843

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-41  Score=308.99  Aligned_cols=254  Identities=17%  Similarity=0.238  Sum_probs=202.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC------------cchHHHHHHHHHhhcCCCcEEEEEecCC
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLS  124 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls  124 (369)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++...++...  +.++.++++|++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~   81 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVR   81 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCC
Confidence            4567899999999999999999999999999999999998            56666766666554  568999999999


Q ss_pred             ChHHHHHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEE
Q 017580          125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV  204 (369)
Q Consensus       125 ~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~v  204 (369)
                      |+++++++++++.+      .++++|+||||||+.....+.+.+++++++++|+.|+++++++++|+|.+   .|+||++
T Consensus        82 ~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~i  152 (287)
T 3pxx_A           82 DRAAVSRELANAVA------EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTS---GASIITT  152 (287)
T ss_dssp             CHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEE
T ss_pred             CHHHHHHHHHHHHH------HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc---CcEEEEe
Confidence            99999999999998      45889999999999755455789999999999999999999999999932   4899999


Q ss_pred             cCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017580          205 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  284 (369)
Q Consensus       205 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~  284 (369)
                      ||.++..........         ...+.++...|++||+++++++++++.|++   +.||+||+|+||+|+|++.+..+
T Consensus       153 sS~~~~~~~~~~~~~---------~~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~  220 (287)
T 3pxx_A          153 GSVAGLIAAAQPPGA---------GGPQGPGGAGYSYAKQLVDSYTLQLAAQLA---PQSIRANVIHPTNVNTDMLNSAP  220 (287)
T ss_dssp             CCHHHHHHHHCCC--------------CHHHHHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEESSBSSTTTSSHH
T ss_pred             ccchhcccccccccc---------cccCCCccchHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCccccccccccc
Confidence            998876432111100         013347788999999999999999999998   78999999999999999986532


Q ss_pred             hHHHH---------HHHHH------HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          285 SFLSL---------MAFTV------LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       285 ~~~~~---------~~~~~------~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .....         .....      ..+ +++.+|+|+|+++++++... ...+|+.+.+++|...
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          221 MYRQFRPDLEAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             HHHHHCTTSSSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhhccccccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            21110         00000      011 57789999999999655432 3578999999998765

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=5.4e-40  Score=298.52  Aligned_cols=247  Identities=13%  Similarity=0.117  Sum_probs=208.0

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+....+.+ +++.+..+..++.++.+|++|+++++++++++.
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV-HELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHH-HHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            5789999999999  6799999999999999999999996554444 444444444579999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      +      .++++|++|||||+..      +..+.+.+++++.+++|+.+++.+++.++|.|++   .|+||++||.++. 
T Consensus        83 ~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~-  152 (266)
T 3oig_A           83 E------QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGE-  152 (266)
T ss_dssp             H------HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGT-
T ss_pred             H------HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEeccccc-
Confidence            8      4588999999999863      3456789999999999999999999999999974   4899999999988 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LM  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~  290 (369)
                                         .+.++...|++||+|++.|+++++.|++   +.||+|++|+||+|+|++.+....... ..
T Consensus       153 -------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  210 (266)
T 3oig_A          153 -------------------LVMPNYNVMGVAKASLDASVKYLAADLG---KENIRVNSISAGPIRTLSAKGISDFNSILK  210 (266)
T ss_dssp             -------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCSGGGTTCTTHHHHHH
T ss_pred             -------------------ccCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCcccccccccccchHHHHH
Confidence                               7788899999999999999999999998   789999999999999999887654322 22


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSAL  339 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~  339 (369)
                      ......+++++.+|+|+|+.+++++... ...+|+.+..++|........
T Consensus       211 ~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~~  260 (266)
T 3oig_A          211 DIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITARLE  260 (266)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCC
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEEeeecC
Confidence            3334456778899999999999766543 367899999999988765443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=4.8e-40  Score=295.69  Aligned_cols=224  Identities=25%  Similarity=0.395  Sum_probs=192.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|+++++++++++.+ 
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~-   80 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVE-   80 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999999888888888654  45789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+.  .+..+.+.+++++++++|+.|+++++++++|.|++++  |+||++||.++.       
T Consensus        81 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~-------  146 (247)
T 2jah_A           81 -----ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGR-------  146 (247)
T ss_dssp             -----HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhc-------
Confidence                 457899999999986  3455789999999999999999999999999998765  899999999987       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||++++.|+++++.|++   +.||+||+|+||+++|++......... .......|
T Consensus       147 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~  209 (247)
T 2jah_A          147 -------------VNVRNAAVYQATKFGVNAFSETLRQEVT---ERGVRVVVIEPGTTDTELRGHITHTAT-KEMYEQRI  209 (247)
T ss_dssp             -------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBSSSGGGGCCCHHH-HHHHHHHT
T ss_pred             -------------CCCCCCcHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEECCCCCCcchhcccchhh-HHHHHhcc
Confidence                         6677888999999999999999999998   789999999999999999765432111 11111123


Q ss_pred             hhCC--CCHHHHHHHHHHHhcCC
Q 017580          298 LGLL--QSPEKGINSVLDAALAP  318 (369)
Q Consensus       298 ~~~~--~~~~e~A~~v~~~~l~~  318 (369)
                       +++  .+|+|+|+.+++++...
T Consensus       210 -~~~~~~~pedvA~~v~~l~s~~  231 (247)
T 2jah_A          210 -SQIRKLQAQDIAEAVRYAVTAP  231 (247)
T ss_dssp             -TTSCCBCHHHHHHHHHHHHHSC
T ss_pred             -cccCCCCHHHHHHHHHHHhCCC
Confidence             455  89999999999776543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=7.2e-41  Score=305.22  Aligned_cols=242  Identities=19%  Similarity=0.243  Sum_probs=199.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+ .+..+.+.+++++.  +.++.++.+|++|+++++++++++.
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~  102 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTIV  102 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999995 45556666666554  5688999999999999999999998


Q ss_pred             HHHhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..+  ..+.+.+++++.+++|+.+++++++.++|.|++++ .|+||++||.++.     
T Consensus       103 ~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-----  170 (271)
T 4iin_A          103 Q------SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGE-----  170 (271)
T ss_dssp             H------HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH-----
T ss_pred             H------hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhc-----
Confidence            8      45789999999998743  34678999999999999999999999999998776 6899999999887     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||+|++.++++++.|++   +.+|+|++|+||+|+|++.+....... ......
T Consensus       171 ---------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~  231 (271)
T 4iin_A          171 ---------------RGNMGQTNYSASKGGMIAMSKSFAYEGA---LRNIRFNSVTPGFIETDMNANLKDELK-ADYVKN  231 (271)
T ss_dssp             ---------------HCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCCC-------------CGGG
T ss_pred             ---------------CCCCCchHhHHHHHHHHHHHHHHHHHHH---HhCcEEEEEEeCcccCCchhhhcHHHH-HHHHhc
Confidence                           6778889999999999999999999998   789999999999999999876543221 112223


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .|++++.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       232 ~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~~  270 (271)
T 4iin_A          232 IPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLY  270 (271)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCee
Confidence            45678889999999999766433 357899999988853

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-40  Score=305.28  Aligned_cols=246  Identities=22%  Similarity=0.253  Sum_probs=205.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+. ..++.++.+|++|+++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999998888888865421 1278999999999999999999998


Q ss_pred             HHHhccCCCCCccEEEeccccccC----CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +      .++++|+||||||+...    ..+.+.++|++++++|+.|++.++++++|.|++++  |+||++||.++.   
T Consensus       102 ~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~---  170 (297)
T 1xhl_A          102 A------KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAG---  170 (297)
T ss_dssp             H------HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGS---
T ss_pred             H------hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhc---
Confidence            8      45789999999998632    45678999999999999999999999999998765  899999999887   


Q ss_pred             cccCCCcccccccccccCCC-chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--hHH---
Q 017580          214 NAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--SFL---  287 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~--~~~---  287 (369)
                                       .+. ++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+...  ...   
T Consensus       171 -----------------~~~~~~~~~Y~asKaa~~~l~~~la~el~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~  230 (297)
T 1xhl_A          171 -----------------PQAHSGYPYYACAKAALDQYTRCTAIDLI---QHGVRVNSVSPGAVATGFMGAMGLPETASDK  230 (297)
T ss_dssp             -----------------SSCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSSHHHHTTCCHHHHHH
T ss_pred             -----------------cCCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCCcCccccccccccccccc
Confidence                             455 6788999999999999999999998   78999999999999999976531  110   


Q ss_pred             --HHH-HHHHHHHhhCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCcccc
Q 017580          288 --SLM-AFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       288 --~~~-~~~~~~~~~~~~~~~e~A~~v~~~~l~--~~~~sG~~~~~~~g~~~~  335 (369)
                        ... ......|++++.+|+|+|+.+++++..  ....+|+.+..++|....
T Consensus       231 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          231 LYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCcccc
Confidence              000 001113567889999999999976643  235789999999987664

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=3.4e-40  Score=303.41  Aligned_cols=247  Identities=20%  Similarity=0.198  Sum_probs=198.9

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCC----hHHH
Q 017580           55 VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSS----FQSV  129 (369)
Q Consensus        55 ~~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~----~~~i  129 (369)
                      .++..++++|+++||||++|||+++|++|+++|++|++++|+. ++++++.+++.+.. +.++.++.+|++|    ++++
T Consensus        15 ~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v   93 (288)
T 2x9g_A           15 VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASC   93 (288)
T ss_dssp             -------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHH
Confidence            3445578899999999999999999999999999999999998 88888888876333 4578999999999    9999


Q ss_pred             HHHHHHHHHHHhccCCCCCccEEEecccccc--CC-----CC-----CCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC
Q 017580          130 LKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TS-----SR-----LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV  197 (369)
Q Consensus       130 ~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~-----~~-----~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~  197 (369)
                      +++++++.+      .++++|+||||||+..  +.     .+     .+.+++++.+++|+.+++++++.++|.|++++.
T Consensus        94 ~~~~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  167 (288)
T 2x9g_A           94 EEIINSCFR------AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNP  167 (288)
T ss_dssp             HHHHHHHHH------HHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHH------hcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC
Confidence            999999988      4578999999999863  23     34     778999999999999999999999999976531


Q ss_pred             -----CCeEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecC
Q 017580          198 -----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  272 (369)
Q Consensus       198 -----~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~P  272 (369)
                           .|+||++||.++.                    .+.++...|++||+|++.++++++.|++   +.||+||+|+|
T Consensus       168 ~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~P  224 (288)
T 2x9g_A          168 NCTSSNLSIVNLCDAMVD--------------------QPCMAFSLYNMGKHALVGLTQSAALELA---PYGIRVNGVAP  224 (288)
T ss_dssp             ---CCCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEE
T ss_pred             CCCCCCeEEEEEeccccc--------------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---ccCeEEEEEEe
Confidence                 4899999999987                    6778889999999999999999999998   78999999999


Q ss_pred             CcccCCccccchhHHHHHHHHHHHHhhCC-CCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          273 GVVKTNIMREVPSFLSLMAFTVLKLLGLL-QSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       273 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      |+|+|++ +..+..  ........|++++ .+|+|+|+.+++++... ...+|+++..++|...
T Consensus       225 G~v~t~~-~~~~~~--~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          225 GVSLLPV-AMGEEE--KDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             SSCSCCT-TSCHHH--HHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccccCcc-ccChHH--HHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence            9999999 422111  1112222466778 89999999999766532 3678999999988653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1e-40  Score=300.51  Aligned_cols=238  Identities=22%  Similarity=0.266  Sum_probs=190.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++ +++++   ++++.  +.++.++++|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998 66554   33332  45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+.      
T Consensus        79 ------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------  145 (249)
T 2ew8_A           79 ------TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW------  145 (249)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG------
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc------
Confidence                  4578999999999863  345778999999999999999999999999998765 6899999999987      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-cchhH-HHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-EVPSF-LSLMAFTV  294 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~-~~~~~-~~~~~~~~  294 (369)
                                    .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+ ..... ........
T Consensus       146 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  208 (249)
T 2ew8_A          146 --------------LKIEAYTHYISTKAANIGFTRALASDLG---KDGITVNAIAPSLVRTATTEASALSAMFDVLPNML  208 (249)
T ss_dssp             --------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCC------------------CTT
T ss_pred             --------------cCCCCchhHHHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCcCcCccchhccccchhhHHHHhh
Confidence                          6677888999999999999999999998   78999999999999999976 32211 00000001


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                       .|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       209 -~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          209 -QAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGMV  247 (249)
T ss_dssp             -SSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             -CccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCcc
Confidence             35677899999999999655432 256899998888753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-40  Score=304.73  Aligned_cols=245  Identities=23%  Similarity=0.286  Sum_probs=204.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+. ..++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999988888888765421 12789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccccC------CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                            .++++|+||||||+..+      ..+.+.+.+++++++|+.+++.+++.++|.|++++  |+||++||.++.  
T Consensus        83 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~--  152 (280)
T 1xkq_A           83 ------QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAG--  152 (280)
T ss_dssp             ------HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGS--
T ss_pred             ------hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCcccc--
Confidence                  45789999999998643      34678999999999999999999999999998664  899999999887  


Q ss_pred             ccccCCCcccccccccccCCC-chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHH--
Q 017580          213 FNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFL--  287 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--~~~~--  287 (369)
                                        .+. ++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+..  ....  
T Consensus       153 ------------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~  211 (280)
T 1xkq_A          153 ------------------PQAQPDFLYYAIAKAALDQYTRSTAIDLA---KFGIRVNSVSPGMVETGFTNAMGMPDQASQ  211 (280)
T ss_dssp             ------------------SSCCCSSHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCBCSSHHHHTTCCHHHHH
T ss_pred             ------------------CCCCCcccHHHHHHHHHHHHHHHHHHHhc---cCCeEEEEEeeCcCcCCccccccccccccc
Confidence                              455 6778999999999999999999998   7899999999999999997653  1110  


Q ss_pred             ---HHH-HHHHHHHhhCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCcccc
Q 017580          288 ---SLM-AFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       288 ---~~~-~~~~~~~~~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~~~g~~~~  335 (369)
                         ... ......|++++.+|+|+|+.+++++...  ...+|+.+..++|....
T Consensus       212 ~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          212 KFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             chHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcccc
Confidence               000 0011135678899999999999766432  35789999999987654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=7.1e-41  Score=308.72  Aligned_cols=242  Identities=20%  Similarity=0.204  Sum_probs=200.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.+++.  +.++.++.+|++|+++++++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999973  3455555555544  567899999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      .+      .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|.|++   .|+||++||.++.   
T Consensus       123 ~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~---  190 (294)
T 3r3s_A          123 RE------ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAY---  190 (294)
T ss_dssp             HH------HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGT---
T ss_pred             HH------HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhc---
Confidence            98      4588999999999853   3457899999999999999999999999999964   4899999999988   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAF  292 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~~~~~~  292 (369)
                                       .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++..... ........
T Consensus       191 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~  250 (294)
T 3r3s_A          191 -----------------QPSPHLLDYAATKAAILNYSRGLAKQVA---EKGIRVNIVAPGPIWTALQISGGQTQDKIPQF  250 (294)
T ss_dssp             -----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSHHHHTTTSCGGGSTTT
T ss_pred             -----------------cCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCcCccccccccCCCHHHHHHH
Confidence                             7778889999999999999999999998   78999999999999999843211 10111111


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ....|++++.+|+|+|+.+++++... ...+|+.+.+++|..+
T Consensus       251 ~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          251 GQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             TTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            22346778899999999999665432 3578999999988653

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=5.7e-40  Score=300.65  Aligned_cols=245  Identities=16%  Similarity=0.120  Sum_probs=205.6

Q ss_pred             CCCCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~  133 (369)
                      +.+.++++|+++||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..+  ++.++.+|++|++++++++
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~   94 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLF   94 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC--CceEEEeecCCHHHHHHHH
Confidence            44567889999999998  8899999999999999999999997  4455566655543  4789999999999999999


Q ss_pred             HHHHHHHhccCCCCCccEEEeccccccC------CCC-CCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          134 DSLQQWLLDSDMHSSIQLLINNAGILAT------SSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       134 ~~i~~~~~~~~~~~~id~lv~nAG~~~~------~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                      +++.+      .++++|+||||||+...      ..+ .+.+.+++++++|+.++++++++++|.|+++  .|+||++||
T Consensus        95 ~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS  166 (280)
T 3nrc_A           95 VELGK------VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTY  166 (280)
T ss_dssp             HHHHH------HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEEC
T ss_pred             HHHHH------HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEec
Confidence            99998      66899999999998642      223 7899999999999999999999999999876  489999999


Q ss_pred             CcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017580          207 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  286 (369)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~  286 (369)
                      .++.                    .+.++...|++||+|++.|+++++.|++   +.||+|++|+||+|+|++.+.....
T Consensus       167 ~~~~--------------------~~~~~~~~Y~asKaal~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~  223 (280)
T 3nrc_A          167 IGAE--------------------KAMPSYNTMGVAKASLEATVRYTALALG---EDGIKVNAVSAGPIKTLAASGISNF  223 (280)
T ss_dssp             GGGT--------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCCCCSGGGGCTTH
T ss_pred             cccc--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEeeccccchhhhcCcch
Confidence            9988                    7788889999999999999999999998   7899999999999999998876543


Q ss_pred             HH-HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          287 LS-LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       287 ~~-~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      .. ........|.+++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       224 ~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          224 KKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             HHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcccc
Confidence            22 223334456788999999999999544322 35789999999998764

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=4.9e-40  Score=301.23  Aligned_cols=242  Identities=17%  Similarity=0.197  Sum_probs=205.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|.++++++++++ 
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~-   98 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA-   98 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH-
Confidence            34688999999999999999999999999999999999999888888777     567999999999999999999988 


Q ss_pred             HHHhccCCCCCccEEEec-cccccC--C-----CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-----CCCCeEEEE
Q 017580          138 QWLLDSDMHSSIQLLINN-AGILAT--S-----SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-----PVPSRIVNV  204 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~n-AG~~~~--~-----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----~~~g~IV~v  204 (369)
                      +      .++++|++||| ||+...  .     .+.+.+++++.+++|+.+++++++.++|.|.+.     +..|+||++
T Consensus        99 ~------~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  172 (281)
T 3ppi_A           99 N------QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLT  172 (281)
T ss_dssp             T------TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEE
T ss_pred             H------HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEE
Confidence            5      57899999999 554321  1     257889999999999999999999999999762     236899999


Q ss_pred             cCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017580          205 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  284 (369)
Q Consensus       205 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~  284 (369)
                      ||.++.                    .+.++...|++||+|+++++++|+.|++   +.||+|++|+||+|+|++.+...
T Consensus       173 sS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~  229 (281)
T 3ppi_A          173 ASIAGY--------------------EGQIGQTAYAAAKAGVIGLTIAAARDLS---SAGIRVNTIAPGTMKTPIMESVG  229 (281)
T ss_dssp             CCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTTC
T ss_pred             eccccc--------------------CCCCCCcccHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCcCCchhhhccc
Confidence            999988                    7778889999999999999999999998   78999999999999999987754


Q ss_pred             hHHHHHHHHHHHHh-hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccC
Q 017580          285 SFLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  336 (369)
Q Consensus       285 ~~~~~~~~~~~~~~-~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~  336 (369)
                      .... .......++ +++.+|+|+|+++++++. ....+|+.+..++|....+
T Consensus       230 ~~~~-~~~~~~~~~~~~~~~pedvA~~v~~l~s-~~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          230 EEAL-AKFAANIPFPKRLGTPDEFADAAAFLLT-NGYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             HHHH-HHHHHTCCSSSSCBCHHHHHHHHHHHHH-CSSCCSCEEEESTTCCCCC
T ss_pred             HHHH-HHHHhcCCCCCCCCCHHHHHHHHHHHHc-CCCcCCcEEEECCCcccCC
Confidence            4321 122222344 678899999999998765 4577899999999987653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3.2e-40  Score=300.12  Aligned_cols=245  Identities=19%  Similarity=0.209  Sum_probs=205.9

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchH-HHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLL-SETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        59 ~~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++.+.. +.++.++++|++|++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHH
Confidence            46889999999999  9999999999999999999999987655 67777776554 56899999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +.+      .++++|+||||||+..  +..+.+.+++++.+++|+.|++++++.++|.|++++ .|+||++||.++... 
T Consensus        95 ~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-  166 (267)
T 3gdg_A           95 VVA------DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIA-  166 (267)
T ss_dssp             HHH------HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC-
T ss_pred             HHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEcccccccc-
Confidence            998      5689999999999874  345779999999999999999999999999998876 689999999887721 


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       ...++...|++||+|++.++++++.|++   +. |+||+|+||+|+|++.+..+.... ....
T Consensus       167 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~-i~v~~v~PG~v~t~~~~~~~~~~~-~~~~  224 (267)
T 3gdg_A          167 -----------------NFPQEQTSYNVAKAGCIHMARSLANEWR---DF-ARVNSISPGYIDTGLSDFVPKETQ-QLWH  224 (267)
T ss_dssp             -----------------CSSSCCHHHHHHHHHHHHHHHHHHHHTT---TT-CEEEEEEECCEECSCGGGSCHHHH-HHHH
T ss_pred             -----------------CCCCCCCcchHHHHHHHHHHHHHHHHhc---cC-cEEEEEECCccccchhhhCCHHHH-HHHH
Confidence                             1124678999999999999999999996   55 999999999999999876644322 2233


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ...|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       225 ~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          225 SMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             TTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             hcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECCceec
Confidence            3456778889999999999766432 3678999999988654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4e-40  Score=297.78  Aligned_cols=237  Identities=25%  Similarity=0.269  Sum_probs=197.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++ +++.+++.      + .++++|++|+++++++++++.+ 
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~------~-~~~~~D~~~~~~~~~~~~~~~~-   73 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG------G-AFFQVDLEDERERVRFVEEAAY-   73 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT------C-EEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh------C-CEEEeeCCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999999887 66655552      3 7889999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        74 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~-------  140 (256)
T 2d1y_A           74 -----ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGL-------  140 (256)
T ss_dssp             -----HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcccccc-------
Confidence                 4578999999999863  445778999999999999999999999999998875 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc----h-hHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----P-SFLSLMAF  292 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~----~-~~~~~~~~  292 (369)
                                   .+.++...|++||++++.++++++.|++   +.+|+||+|+||+++|++....    . ........
T Consensus       141 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  204 (256)
T 2d1y_A          141 -------------FAEQENAAYNASKGGLVNLTRSLALDLA---PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDW  204 (256)
T ss_dssp             -------------SBCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHC--------CHHH
T ss_pred             -------------CCCCCChhHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEeeCCccCchhhhccccccCCHHHHHHH
Confidence                         6667888999999999999999999998   7899999999999999986542    1 10000111


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ....|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       205 ~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~  247 (256)
T 2d1y_A          205 EDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTA  247 (256)
T ss_dssp             HTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCccc
Confidence            12235677889999999999765432 2568999998888765

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.2e-40  Score=302.73  Aligned_cols=236  Identities=21%  Similarity=0.251  Sum_probs=195.3

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++.+++||+++||||++|||+++|++|+++|++|++++|+.+.++             ....+.+|+++.+++++++++
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~   87 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGA   87 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHH
Confidence            3456788999999999999999999999999999999999876431             124458999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||..+.   
T Consensus        88 ~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~---  157 (266)
T 3uxy_A           88 VAA------GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGL---  157 (266)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT---
T ss_pred             HHH------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhC---
Confidence            988      4588999999999874  445789999999999999999999999999998876 6899999999988   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH------H
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF------L  287 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~------~  287 (369)
                                       .+.++...|++||+|++.++++++.|++   +.||+||+|+||+|+|++.+.....      .
T Consensus       158 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  217 (266)
T 3uxy_A          158 -----------------RPGPGHALYCLTKAALASLTQCMGMDHA---PQGIRINAVCPNEVNTPMLRTGFAKRGFDPDR  217 (266)
T ss_dssp             -----------------BCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCCHHHHHHHHHTTCCHHH
T ss_pred             -----------------CCCCCChHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeeCCCcchHhhhhhhcccccchH
Confidence                             7778889999999999999999999998   7899999999999999987543211      1


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      .........|++++.+|+|+|+++++++... ...+|+.+..++|..+
T Consensus       218 ~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          218 AVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence            1122223346778899999999999765443 3578999999988653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=6.4e-40  Score=296.01  Aligned_cols=246  Identities=28%  Similarity=0.322  Sum_probs=207.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++|+++||||++|||+++|++|+++|++|+++ .|+.+.+++..+++.+.  +.++.++.+|+++.++++++++++.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999885 77788888888888765  56789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                      .++.....+++|+||||||+..  +..+.+.+.+++++++|+.+++++++.++|.|++   .|+||++||.++.      
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~------  152 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATR------  152 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGT------
T ss_pred             HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhc------
Confidence            6643323467999999999863  3446789999999999999999999999999954   4799999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~  295 (369)
                                    .+.+....|++||+|++.|+++++.|++   +.+|+|++|+||+++|++.+....... .......
T Consensus       153 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~  215 (255)
T 3icc_A          153 --------------ISLPDFIAYSMTKGAINTMTFTLAKQLG---ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTI  215 (255)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHT
T ss_pred             --------------cCCCCcchhHHhHHHHHHHHHHHHHHHH---hcCeEEEEEEEeeecccchhhhcccHHHHHhhhcc
Confidence                          7778889999999999999999999998   789999999999999999877543322 2222333


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .+++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       216 ~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          216 SAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             CCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence            46678899999999999766433 367899999998863

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=8.4e-40  Score=296.97  Aligned_cols=241  Identities=20%  Similarity=0.276  Sum_probs=201.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++             +.++.++++|++|+++++++++++.+ 
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~-   70 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFK-   70 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999998764             34678899999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        71 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  137 (264)
T 2dtx_A           71 -----EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQAS-------  137 (264)
T ss_dssp             -----HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhc-------
Confidence                 4578999999999863  455779999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch------hH----H
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP------SF----L  287 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~------~~----~  287 (369)
                                   .+.++...|++||++++.++++++.|++   +. |+||+|+||+++|++.+...      ..    .
T Consensus       138 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  200 (264)
T 2dtx_A          138 -------------IITKNASAYVTSKHAVIGLTKSIALDYA---PL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEK  200 (264)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHT---TT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHH
T ss_pred             -------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---CC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHH
Confidence                         6677888999999999999999999997   66 99999999999999875431      01    1


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCCHH
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFNSK  344 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~~~d~~  344 (369)
                      .........|++++.+|+|+|+.+++++... ...+|+.+..++|.....+....+++
T Consensus       201 ~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~~p~~~~~~~  258 (264)
T 2dtx_A          201 KISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLSIRAPISTPELE  258 (264)
T ss_dssp             HHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCCCCC--
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcccCCCCCCcchh
Confidence            1111222346678899999999999766432 25789999999998777666655554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=5e-40  Score=296.99  Aligned_cols=239  Identities=22%  Similarity=0.256  Sum_probs=198.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+  ++..+++...  +.++.++.+|++|+++++++++++.+  
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~--   75 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAER--   75 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHH--
Confidence            57899999999999999999999999999999999876  5555666543  45788999999999999999999988  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|+||||||+..  +..+.+.+++++.+++|+.|++++++.++|.|++++ .|+||++||.++.        
T Consensus        76 ----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~--------  142 (255)
T 2q2v_A           76 ----EFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGL--------  142 (255)
T ss_dssp             ----HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT--------
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhc--------
Confidence                4578999999999863  345678999999999999999999999999998775 6899999999887        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHH--------
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSL--------  289 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~--------  289 (369)
                                  .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+..... ...        
T Consensus       143 ------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  207 (255)
T 2q2v_A          143 ------------VGSTGKAAYVAAKHGVVGLTKVVGLETA---TSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQ  207 (255)
T ss_dssp             ------------SCCTTBHHHHHHHHHHHHHHHHHHHHTT---TSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHH
T ss_pred             ------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeeCCCcCcchhhhcccccccccchHHHH
Confidence                        6667788999999999999999999998   7899999999999999987543210 000        


Q ss_pred             HHH-HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          290 MAF-TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       290 ~~~-~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ... ....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       208 ~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          208 HDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            001 11235667889999999999665432 246799998888754

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=3.6e-40  Score=299.95  Aligned_cols=242  Identities=17%  Similarity=0.178  Sum_probs=203.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEE-EeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ..++++|+++||||++|||+++|++|+++|++|++ ..|+.+..++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   98 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHE   98 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999966 567778888888888765  457899999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|+||||||+..  +..+.+.+++++.+++|+.|++++++.++|.|.+++..|+||++||.++.    
T Consensus        99 ~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----  168 (267)
T 4iiu_A           99 IA------QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGV----  168 (267)
T ss_dssp             HH------HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHH----
T ss_pred             HH------HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhc----
Confidence            88      4588999999999874  33477999999999999999999999999988633336899999999887    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.++...|++||+|++.|+++++.|++   +.||+|++|+||+|+|++.+..+...  .....
T Consensus       169 ----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~  227 (267)
T 4iiu_A          169 ----------------MGNRGQVNYSAAKAGIIGATKALAIELA---KRKITVNCIAPGLIDTGMIEMEESAL--KEAMS  227 (267)
T ss_dssp             ----------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSTTCCCCHHHH--HHHHH
T ss_pred             ----------------cCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEEeeecCCcccccHHHH--HHHHh
Confidence                            6677889999999999999999999998   78999999999999999987653322  22233


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ..|++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       228 ~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          228 MIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence            456778899999999999766432 35789999988874

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.5e-41  Score=307.44  Aligned_cols=229  Identities=21%  Similarity=0.259  Sum_probs=187.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +..+.++++|++|+++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999988887654 33468999999999999999999998


Q ss_pred             HHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~~~~~~~  214 (369)
                            .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|.|++++ ..|+||++||.++.    
T Consensus       108 ------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~----  177 (281)
T 4dry_A          108 ------EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ----  177 (281)
T ss_dssp             ------HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT----
T ss_pred             ------HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC----
Confidence                  5588999999999863   445789999999999999999999999999998764 25899999999988    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.++...|++||+|+++++++++.|++   +.+|+||+|+||+|+|++.+........  ...
T Consensus       178 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~--~~~  236 (281)
T 4dry_A          178 ----------------TPRPNSAPYTATKHAITGLTKSTALDGR---MHDIACGQIDIGNAATDMTARMSTGVLQ--ANG  236 (281)
T ss_dssp             ----------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEECBCC-------CEEEC--TTS
T ss_pred             ----------------CCCCCChhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEECcCcChhhhhhcchhhh--hhh
Confidence                            7778889999999999999999999998   8899999999999999997654221000  001


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCCC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      ..+.+++.+|+|+|+++++++..+.
T Consensus       237 ~~~~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          237 EVAAEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             CEEECCCBCHHHHHHHHHHHHHSCT
T ss_pred             cccccCCCCHHHHHHHHHHHhCCCc
Confidence            1234567899999999998776554

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=7.3e-41  Score=302.30  Aligned_cols=240  Identities=21%  Similarity=0.215  Sum_probs=200.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++.+|++|+++++++++++.+ 
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   75 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYARE-   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999988777766554     34688999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.|++++++.++|.|++++ .|+||++||.++.       
T Consensus        76 -----~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  142 (254)
T 1hdc_A           76 -----EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGL-------  142 (254)
T ss_dssp             -----HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhc-------
Confidence                 4578999999999863  345678999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||++++.++++++.|++   +.+|+||+|+||+++|++.+....... .......|
T Consensus       143 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~p  205 (254)
T 1hdc_A          143 -------------MGLALTSSYGASKWGVRGLSKLAAVELG---TDRIRVNSVHPGMTYTPMTAETGIRQG-EGNYPNTP  205 (254)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHTCCCS-TTSCTTST
T ss_pred             -------------cCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecccCcCccccccchhHH-HHHHhcCC
Confidence                         6667888999999999999999999998   789999999999999998654211000 00011135


Q ss_pred             hhCCC-CHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          298 LGLLQ-SPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 ~~~~~-~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ++++. +|+|+|+.+++++... ...+|+.+..++|....
T Consensus       206 ~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~  245 (254)
T 1hdc_A          206 MGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             TSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTS
T ss_pred             CCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence            56778 9999999999766432 25689999999887653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.8e-40  Score=297.40  Aligned_cols=237  Identities=23%  Similarity=0.269  Sum_probs=196.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++     ..++.++.+|++|+++++++++++.+ 
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALE-   76 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999988777766554     25788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.| ++  .|+||++||..+.       
T Consensus        77 -----~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-------  141 (263)
T 2a4k_A           77 -----EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-------  141 (263)
T ss_dssp             -----HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-------
T ss_pred             -----HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-------
Confidence                 4588999999999863  34577899999999999999999999999999 43  5899999998764       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                    +.++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+...... ........|
T Consensus       142 --------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~p  203 (263)
T 2a4k_A          142 --------------GAFGLAHYAAGKLGVVGLARTLALELA---RKGVRVNVLLPGLIQTPMTAGLPPWA-WEQEVGASP  203 (263)
T ss_dssp             --------------CHHHHHHHHHCSSHHHHHHHHHHHHHT---TTTCEEEEEEECSBCCGGGTTSCHHH-HHHHHHTST
T ss_pred             --------------CCCCcHHHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEEeCcCcCchhhhcCHHH-HHHHHhcCC
Confidence                          235678999999999999999999998   78999999999999999987643221 111222246


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       204 ~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          204 LGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTC
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCcccc
Confidence            678899999999999766432 25789999999887653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=4e-40  Score=298.41  Aligned_cols=232  Identities=21%  Similarity=0.248  Sum_probs=197.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+..+           ..++.++.+|++|+++++++++++.+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~   92 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIE   92 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999876421           34789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+...    
T Consensus        93 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~----  161 (260)
T 3un1_A           93 ------RFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQP----  161 (260)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSC----
T ss_pred             ------HCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccC----
Confidence                  4578999999999863  345789999999999999999999999999998876 799999999876511    


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||+|++.++++++.|++   +.||+||+|+||+|+|++......    .......
T Consensus       162 --------------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~----~~~~~~~  220 (260)
T 3un1_A          162 --------------MVGMPSALASLTKGGLNAVTRSLAMEFS---RSGVRVNAVSPGVIKTPMHPAETH----STLAGLH  220 (260)
T ss_dssp             --------------BTTCCCHHHHHHHHHHHHHHHHHHHHTT---TTTEEEEEEEECCBCCTTSCGGGH----HHHHTTS
T ss_pred             --------------CCCCccHHHHHHHHHHHHHHHHHHHHhC---cCCeEEEEEeecCCCCCCCCHHHH----HHHhccC
Confidence                          2344567999999999999999999998   889999999999999999764221    1122335


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      |++++.+|+|+|++++++ ..+...+|+.+..++|...
T Consensus       221 p~~r~~~~~dva~av~~L-~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          221 PVGRMGEIRDVVDAVLYL-EHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             TTSSCBCHHHHHHHHHHH-HHCTTCCSCEEEESTTGGG
T ss_pred             CCCCCcCHHHHHHHHHHh-cccCCCCCcEEEECCCeec
Confidence            778899999999999976 4455778999999998764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1e-39  Score=305.44  Aligned_cols=243  Identities=21%  Similarity=0.195  Sum_probs=202.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-CCcchHHHHHHHHHhhcCCCcEEEEEecCCChH----------
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQ----------  127 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~----------  127 (369)
                      .++++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++.... +.++.++++|++|++          
T Consensus        42 ~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~  120 (328)
T 2qhx_A           42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGS  120 (328)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhccccccccc
Confidence            347899999999999999999999999999999999 99998888888886333 457899999999999          


Q ss_pred             -------HHHHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCC--------------HHhHHHhhhhhhHHHHHH
Q 017580          128 -------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLT--------------PEGYDQMMSTNYIGAFFL  184 (369)
Q Consensus       128 -------~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~--------------~~~~~~~~~vN~~~~~~l  184 (369)
                             +++++++++.+      .++++|+||||||+..  +..+.+              .+++++++++|+.+++++
T Consensus       121 ~~~~~~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l  194 (328)
T 2qhx_A          121 APVTLFTRCAELVAACYT------HWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFL  194 (328)
T ss_dssp             CCBCHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHH
T ss_pred             cccccHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence                   99999999988      4578999999999863  344667              899999999999999999


Q ss_pred             HHHHhHhhhcCCC-----CCeEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCC
Q 017580          185 TKLLLPLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  259 (369)
Q Consensus       185 ~~~~~~~~~~~~~-----~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~  259 (369)
                      +++++|.|++++.     .|+||++||..+.                    .+.++...|++||++++.|+++|+.|++ 
T Consensus       195 ~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~-  253 (328)
T 2qhx_A          195 IKAFAHRVAGTPAKHRGTNYSIINMVDAMTN--------------------QPLLGYTIYTMAKGALEGLTRSAALELA-  253 (328)
T ss_dssp             HHHHHHHHHHSCGGGSCSCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG-
T ss_pred             HHHHHHHHHhcCCcCCCCCcEEEEECchhhc--------------------cCCCCcHHHHHHHHHHHHHHHHHHHHHh-
Confidence            9999999976531     4899999999987                    6778889999999999999999999998 


Q ss_pred             CCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          260 DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       260 ~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                        +.||+||+|+||+|+|++ ...+..  ........|++ ++.+|+|+|+++++++... ...+|+++..++|...
T Consensus       254 --~~gIrvn~v~PG~v~T~~-~~~~~~--~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          254 --PLQIRVNGVGPGLSVLVD-DMPPAV--WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             --GGTEEEEEEEESSBSCCC-CSCHHH--HHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             --hcCcEEEEEecCcccCCc-cccHHH--HHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence              789999999999999999 544221  11112224666 8889999999999766432 3678999999988654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-40  Score=300.28  Aligned_cols=245  Identities=22%  Similarity=0.292  Sum_probs=196.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhh-cCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR-NKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++... ..+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888888777432 1245789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCC----CHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc-cc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRL----TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH-RN  211 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~----~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~-~~  211 (369)
                            .++++|+||||||+..  +..+.    +.+++++.+++|+.|++++++.++|.|++++  |+||++||.++ . 
T Consensus        83 ------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~-  153 (278)
T 1spx_A           83 ------KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGL-  153 (278)
T ss_dssp             ------HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSS-
T ss_pred             ------HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccc-
Confidence                  4578999999999863  33455    8999999999999999999999999998764  89999999987 6 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHH-
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLS-  288 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--~~~-  288 (369)
                                         .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++......  ... 
T Consensus       154 -------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  211 (278)
T 1spx_A          154 -------------------HATPDFPYYSIAKAAIDQYTRNTAIDLI---QHGIRVNSISPGLVATGFGSAMGMPEETSK  211 (278)
T ss_dssp             -------------------SCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCCCC------------
T ss_pred             -------------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCcccCccccccccCchhhh
Confidence                               5667788999999999999999999997   789999999999999998654211  000 


Q ss_pred             -----HHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC-C-CcccEEeCCCCcccc
Q 017580          289 -----LMAFTVLKLLGLLQSPEKGINSVLDAALAPP-E-TSGVYFFGGKGRTVN  335 (369)
Q Consensus       289 -----~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~-~sG~~~~~~~g~~~~  335 (369)
                           ........|++++.+|+|+|+.+++++.... . .+|+.+..++|....
T Consensus       212 ~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          212 KFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             --HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             hhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccc
Confidence                 1111222356788999999999996654322 3 689999999887654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=3.5e-40  Score=307.20  Aligned_cols=257  Identities=23%  Similarity=0.253  Sum_probs=212.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE---------eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLV---------GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVL  130 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~---------~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~  130 (369)
                      +++||+++||||++|||+++|++|+++|++|+++         +|+.++++++.+++...+  ..   ..+|+++.++++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~--~~---~~~D~~~~~~~~   80 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GK---AVANYDSVEAGE   80 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CE---EEEECCCGGGHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC--Ce---EEEeCCCHHHHH
Confidence            5789999999999999999999999999999996         457778888888886643  22   358999999999


Q ss_pred             HHHHHHHHHHhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          131 KFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       131 ~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                      ++++++.+      .++++|+||||||+...  ..+.+.++++.++++|+.|+++++++++|.|++++ .|+||++||.+
T Consensus        81 ~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~  153 (319)
T 1gz6_A           81 KLVKTALD------TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASAS  153 (319)
T ss_dssp             HHHHHHHH------HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHH
T ss_pred             HHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChh
Confidence            99999888      56899999999998743  34678999999999999999999999999998765 68999999988


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  288 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~  288 (369)
                      +.                    .+.++...|++||+++..|+++|++|++   +.||+||+|+||++ |++.+...... 
T Consensus       154 ~~--------------------~~~~~~~~Y~aSK~a~~~~~~~la~el~---~~gI~vn~v~PG~~-t~~~~~~~~~~-  208 (319)
T 1gz6_A          154 GI--------------------YGNFGQANYSAAKLGLLGLANTLVIEGR---KNNIHCNTIAPNAG-SRMTETVMPED-  208 (319)
T ss_dssp             HH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEEECC-STTTGGGSCHH-
T ss_pred             hc--------------------cCCCCCHHHHHHHHHHHHHHHHHHHHhc---ccCEEEEEEeCCCc-cccccccCChh-
Confidence            77                    5556788999999999999999999998   78999999999998 88865431110 


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc------------cCCcccCCHHHHHHHHHHHHHh
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV------------NSSALSFNSKLAGELWTTSCNL  356 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~------------~~~~~~~d~~~~~~lw~~~~~~  356 (369)
                      .         ....+|+|+|+.+++++..+...+|++|..++|...            ..+....|++.++++|+.++++
T Consensus       209 ~---------~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~  279 (319)
T 1gz6_A          209 L---------VEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDF  279 (319)
T ss_dssp             H---------HHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCC
T ss_pred             h---------hccCCHHHHHHHHHHHhCchhhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhcc
Confidence            0         013599999999998765544568998877766432            1234567999999999999999


Q ss_pred             hhccCC
Q 017580          357 FINSQL  362 (369)
Q Consensus       357 ~~~~~~  362 (369)
                      .+..-|
T Consensus       280 ~~~~~~  285 (319)
T 1gz6_A          280 SNASKP  285 (319)
T ss_dssp             TTCBCC
T ss_pred             ccccCC
Confidence            875544

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.7e-40  Score=302.45  Aligned_cols=230  Identities=19%  Similarity=0.282  Sum_probs=193.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|.++++++++++.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  103 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAF  103 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999999888765  5678999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++..|+||++||.++.     
T Consensus       104 ~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-----  172 (301)
T 3tjr_A          104 R------LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGL-----  172 (301)
T ss_dssp             H------HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT-----
T ss_pred             H------hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc-----
Confidence            8      4578999999999873  44578999999999999999999999999999876545899999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-----
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-----  290 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~-----  290 (369)
                                     .+.++...|++||+|++.++++|+.|++   +.||+|++|+||+|+|++...........     
T Consensus       173 ---------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  234 (301)
T 3tjr_A          173 ---------------VPNAGLGTYGVAKYGVVGLAETLAREVK---PNGIGVSVLCPMVVETKLVSNSERIRGADYGMSA  234 (301)
T ss_dssp             ---------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEECCSCCCSSHHHHHHHHC--------
T ss_pred             ---------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEECCccccccccccccccchhhcccc
Confidence                           7788899999999999999999999998   78999999999999999976532211100     


Q ss_pred             ----HHHHHHHhhCCCCHHHHHHHHHHHhcCC
Q 017580          291 ----AFTVLKLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       291 ----~~~~~~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                          .+..........+|+|+|+.++.++...
T Consensus       235 ~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          235 TPEGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             --------------CCCHHHHHHHHHHHHHHT
T ss_pred             ChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence                0011112234679999999999877554

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-39  Score=295.36  Aligned_cols=247  Identities=17%  Similarity=0.179  Sum_probs=197.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.+|+++||||++|||+++|++|+++|++|++++|+.+...+...+..... +.++.++++|++|+++++++++++.+  
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~--   81 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMS--   81 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH--
Confidence            457999999999999999999999999999999887655443333332222 46799999999999999999999998  


Q ss_pred             hccCCCCCccEEEeccccc----cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          141 LDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                          .++++|+||||||+.    .+..+.+.+++++.+++|+.|++.+++.++|.|++++ .|+||++||..+..     
T Consensus        82 ----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~-----  151 (264)
T 3i4f_A           82 ----HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADS-----  151 (264)
T ss_dssp             ----HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGG-----
T ss_pred             ----HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcc-----
Confidence                457899999999943    3345778999999999999999999999999998776 68999999983320     


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                   ..+.++...|++||+|++.++++++.|++   +.||+|++|+||+|+|++.+....... .......
T Consensus       152 -------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~  214 (264)
T 3i4f_A          152 -------------APGWIYRSAFAAAKVGLVSLTKTVAYEEA---EYGITANMVCPGDIIGEMKEATIQEAR-QLKEHNT  214 (264)
T ss_dssp             -------------CCCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCGGGGSCCHHHHH-HC-----
T ss_pred             -------------cCCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEccCCccCccchhccHHHH-HHHhhcC
Confidence                         15567778999999999999999999998   789999999999999999887654322 1223345


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCC
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSS  337 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~  337 (369)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|......
T Consensus       215 p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          215 PIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             ---CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCCC-
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeeccC
Confidence            7788999999999999766543 3578999999999877543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1e-39  Score=296.25  Aligned_cols=241  Identities=23%  Similarity=0.255  Sum_probs=199.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.     .++.++++|++|+++++++++++.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~d~~~v~~~~~~~~~   82 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVTKRASVDAAMQKAID   82 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-----TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----cCCeEEEEeCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999887766655442     2678899999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.+++++.+++|+.++++++++++|.|++++..|+||++||..+.      
T Consensus        83 ------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------  150 (263)
T 3ak4_A           83 ------ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAK------  150 (263)
T ss_dssp             ------HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc------
Confidence                  4578999999999863  34567899999999999999999999999999876435899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------H
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------F  286 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~  286 (369)
                                    .+.++...|++||++++.++++++.|++   +.||+|++|+||+++|++......          .
T Consensus       151 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  213 (263)
T 3ak4_A          151 --------------VGAPLLAHYSASKFAVFGWTQALAREMA---PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPE  213 (263)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHH
T ss_pred             --------------cCCCCchhHHHHHHHHHHHHHHHHHHHh---HcCeEEEEEecccccChhhhhhccccccccccCcH
Confidence                          5667788999999999999999999998   789999999999999998654321          0


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ..........|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       214 ~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          214 AVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            11111112235678899999999999766432 256899998888854

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=6.6e-40  Score=298.98  Aligned_cols=241  Identities=20%  Similarity=0.252  Sum_probs=192.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++|+++||||++|||+++|++|+++|++|+++ .|+.+.++++.+++.+.  +.++.++.+|++|+++++++++++.+ 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~-  100 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDR-  100 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            358999999999999999999999999999876 78888888888887665  56899999999999999999999998 


Q ss_pred             HhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC--CCCCeEEEEcCCccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS--PVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--~~~g~IV~vsS~~~~~~~~  214 (369)
                           .++++|+||||||+..   +..+.+.+++++++++|+.|++++++.++|.|++.  +..|+||++||.++.    
T Consensus       101 -----~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~----  171 (272)
T 4e3z_A          101 -----QFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAI----  171 (272)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHH----
T ss_pred             -----hCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhc----
Confidence                 4578999999999863   34567999999999999999999999999999763  225899999999887    


Q ss_pred             ccCCCcccccccccccCCCc-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                      .+.+ ....|++||+|++.++++++.|++   +.||+|++|+||+|+|++..............
T Consensus       172 ----------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~  232 (272)
T 4e3z_A          172 ----------------LGSATQYVDYAASKAAIDTFTIGLAREVA---AEGIRVNAVRPGIIETDLHASGGLPDRAREMA  232 (272)
T ss_dssp             ----------------HCCTTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBC-----------------
T ss_pred             ----------------cCCCCCcchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEecCCCcCCcccccCChHHHHHHh
Confidence                            3333 567899999999999999999998   78999999999999999876532221122222


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ...+++++.+|+|+|+++++++... ...+|+.+..++|+
T Consensus       233 ~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          233 PSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             -CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             hcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence            3345677889999999999766433 35689999888874

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.2e-39  Score=306.51  Aligned_cols=232  Identities=17%  Similarity=0.259  Sum_probs=198.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch-------HHHHHHHHHhhcCCCcEEEEEecCCChHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-------LSETMADITSRNKDARLEAFQVDLSSFQSV  129 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i  129 (369)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+.++       ++++.+++...  +.++.++.+|++|++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHH
Confidence            4457899999999999999999999999999999999999875       55666776654  56899999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          130 LKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       130 ~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                      +++++++.+      .++++|+||||||+..  +..+.+.+.|++++++|+.|+++++++++|+|++++ .|+||++||.
T Consensus       117 ~~~~~~~~~------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~  189 (346)
T 3kvo_A          117 SAAVEKAIK------KFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPP  189 (346)
T ss_dssp             HHHHHHHHH------HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCC
T ss_pred             HHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCH
Confidence            999999998      4578999999999863  456789999999999999999999999999998876 7999999999


Q ss_pred             cccccccccCCCcccccccccccCC--CchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCc-ccCCccccch
Q 017580          208 THRNVFNAQVNNETITGKFFLRSKC--YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV-VKTNIMREVP  284 (369)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~-v~T~~~~~~~  284 (369)
                      .+.                    .+  .++...|++||++++.++++++.|++    .+|+||+|+||+ ++|++.+...
T Consensus       190 ~~~--------------------~~~~~~~~~~Y~aSKaal~~l~~~la~e~~----~gIrvn~v~PG~~i~T~~~~~~~  245 (346)
T 3kvo_A          190 LNL--------------------NPVWFKQHCAYTIAKYGMSMYVLGMAEEFK----GEIAVNALWPKTAIHTAAMDMLG  245 (346)
T ss_dssp             CCC--------------------CGGGTSSSHHHHHHHHHHHHHHHHHHHHTT----TTCEEEEEECSBCBCCHHHHHHC
T ss_pred             HHc--------------------CCCCCCCchHHHHHHHHHHHHHHHHHHHhc----CCcEEEEEeCCCccccHHHHhhc
Confidence            887                    33  56788999999999999999999994    689999999995 8998865432


Q ss_pred             hHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017580          285 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  331 (369)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g  331 (369)
                      .         ..+++++.+|+|+|+++++++..+...+|+++ .++|
T Consensus       246 ~---------~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          246 G---------PGIESQCRKVDIIADAAYSIFQKPKSFTGNFV-IDEN  282 (346)
T ss_dssp             C-----------CGGGCBCTHHHHHHHHHHHTSCTTCCSCEE-EHHH
T ss_pred             c---------ccccccCCCHHHHHHHHHHHHhcCCCCCceEE-ECCc
Confidence            1         12456788999999999988776446789988 4444

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2e-39  Score=291.93  Aligned_cols=236  Identities=21%  Similarity=0.286  Sum_probs=187.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     ..++.++.+|+++.++++++++   
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~---   80 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLIS---   80 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHH---
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHH---
Confidence            34678999999999999999999999999999999999999888887776     4578899999999999887765   


Q ss_pred             HHHhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                             ..+++|++|||||+..+  ..+.+.+++++++++|+.+++.+++.++|.|++++ .|+||++||.++.     
T Consensus        81 -------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-----  147 (249)
T 3f9i_A           81 -------KTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGI-----  147 (249)
T ss_dssp             -------TCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC------
T ss_pred             -------hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhc-----
Confidence                   34689999999998743  34678899999999999999999999999998765 6899999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||+|++.++++++.|++   +.+|+|++|+||+|+|++.+...... .......
T Consensus       148 ---------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~  208 (249)
T 3f9i_A          148 ---------------AGNPGQANYCASKAGLIGMTKSLSYEVA---TRGITVNAVAPGFIKSDMTDKLNEKQ-REAIVQK  208 (249)
T ss_dssp             ----------------CCSCSHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBC------CCHHH-HHHHHHH
T ss_pred             ---------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEecCccccCcccccCHHH-HHHHHhc
Confidence                           6778889999999999999999999998   78999999999999999987764432 2223334


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .+++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       209 ~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          209 IPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence            56778899999999999766543 356899999888864

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-39  Score=292.10  Aligned_cols=230  Identities=27%  Similarity=0.280  Sum_probs=195.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecC--CChHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL--SSFQSVLKFKDS  135 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--s~~~~i~~~~~~  135 (369)
                      ...++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ ..++.++.+|+  ++.+++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHH
Confidence            346889999999999999999999999999999999999999999999887764 34566777766  999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      +.+      .++++|+||||||+..   +..+.+.+++++++++|+.|++.+++.++|.|++++ .|+||++||..+.  
T Consensus        88 ~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~--  158 (247)
T 3i1j_A           88 VEH------EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGR--  158 (247)
T ss_dssp             HHH------HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGT--
T ss_pred             HHH------hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhc--
Confidence            998      4578999999999863   345779999999999999999999999999998776 7899999999988  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFLSLMA  291 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~-~~i~v~~v~PG~v~T~~~~~~~~~~~~~~  291 (369)
                                        .+.++...|++||+|+++|+++++.|++   + .+|+||+|+||+|+|++.+......    
T Consensus       159 ------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~~i~v~~v~PG~v~t~~~~~~~~~~----  213 (247)
T 3i1j_A          159 ------------------KGRANWGAYGVSKFATEGLMQTLADELE---GVTAVRANSINPGATRTGMRAQAYPDE----  213 (247)
T ss_dssp             ------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTSSEEEEEEECCCCSSHHHHHHSTTS----
T ss_pred             ------------------CCCCCcchhHHHHHHHHHHHHHHHHHhc---CCCCeEEEEEecCcccCccchhccccc----
Confidence                              7778889999999999999999999997   4 7999999999999999865421110    


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEe
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFF  327 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~  327 (369)
                           ...+..+|+|+|+.+++++... ...+|+.+.
T Consensus       214 -----~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~  245 (247)
T 3i1j_A          214 -----NPLNNPAPEDIMPVYLYLMGPDSTGINGQALN  245 (247)
T ss_dssp             -----CGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEE
T ss_pred             -----CccCCCCHHHHHHHHHHHhCchhccccCeeec
Confidence                 1124679999999999655432 256787775

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-40  Score=298.47  Aligned_cols=238  Identities=21%  Similarity=0.195  Sum_probs=200.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++|+++++++++++.+ 
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQR-   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999998887777666     45789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|++++  |+||++||..+.       
T Consensus        77 -----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~-------  142 (253)
T 1hxh_A           77 -----RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSW-------  142 (253)
T ss_dssp             -----HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhc-------
Confidence                 4588999999999863  455788999999999999999999999999998765  899999999987       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCC--CeEEEEecCCcccCCccccc-hhHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR--HVSVIAADPGVVKTNIMREV-PSFLSLMAFTV  294 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~--~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~  294 (369)
                                   .+.++...|++||++++.++++++.|++   +.  +|+||+|+||+++|++.... +..........
T Consensus       143 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  206 (253)
T 1hxh_A          143 -------------LPIEQYAGYSASKAAVSALTRAAALSCR---KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLH  206 (253)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHH---HHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBC
T ss_pred             -------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhh
Confidence                         6677888999999999999999999997   55  89999999999999986541 11100000111


Q ss_pred             ---HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          295 ---LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       295 ---~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                         ..|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       207 ~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          207 DPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             BTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred             hhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCcc
Confidence               235567889999999999765433 256899999888854

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2e-39  Score=296.38  Aligned_cols=240  Identities=18%  Similarity=0.181  Sum_probs=194.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCCh----HHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSF----QSVLKFKD  134 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~----~~i~~~~~  134 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++| ++++++++.+++.+.. +.++.++.+|++|.    ++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHH
Confidence            467899999999999999999999999999999999 8888888888886652 34789999999999    99999999


Q ss_pred             HHHHHHhccCCCCCccEEEecccccc--CCCCCCH-----------HhHHHhhhhhhHHHHHHHHHHhHhhhcCCCC---
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTP-----------EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP---  198 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~-----------~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~---  198 (369)
                      ++.+      .++++|+||||||+..  +..+.+.           +.+++++++|+.++++++++++|.|+ ++ .   
T Consensus        87 ~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~  158 (276)
T 1mxh_A           87 CSFR------AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EG-GAWR  158 (276)
T ss_dssp             HHHH------HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------
T ss_pred             HHHH------hcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cC-CCCC
Confidence            9988      4578999999999863  3446677           89999999999999999999999997 43 4   


Q ss_pred             ---CeEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc
Q 017580          199 ---SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  275 (369)
Q Consensus       199 ---g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v  275 (369)
                         |+||++||..+.                    .+.++...|++||++++.++++++.|++   +.||+||+|+||++
T Consensus       159 ~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~v~~v~PG~v  215 (276)
T 1mxh_A          159 SRNLSVVNLCDAMTD--------------------LPLPGFCVYTMAKHALGGLTRAAALELA---PRHIRVNAVAPGLS  215 (276)
T ss_dssp             CCCEEEEEECCGGGG--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSB
T ss_pred             CCCcEEEEECchhhc--------------------CCCCCCeehHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCcc
Confidence               899999999988                    6778889999999999999999999998   78999999999999


Q ss_pred             cCCccccchhHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          276 KTNIMREVPSFLSLMAFTVLKLLGL-LQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       276 ~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      +|+  ....... ........|+++ +.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       216 ~t~--~~~~~~~-~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          216 LLP--PAMPQET-QEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             SCC--SSSCHHH-HHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCC--ccCCHHH-HHHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            999  3332211 111112245667 889999999999766432 2568999998888643

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=4.3e-39  Score=292.50  Aligned_cols=241  Identities=15%  Similarity=0.153  Sum_probs=199.6

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+..+.  ..++++|++|+++++++++++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS--DIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC--cEEEEccCCCHHHHHHHHHHHH
Confidence            4779999999999  9999999999999999999999997 555566666554322  3789999999999999999998


Q ss_pred             HHHhccCCCCCccEEEeccccccC------CCC-CCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILAT------SSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~------~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                      +      .++++|+||||||+..+      ..+ .+.+++++++++|+.++++++++++|.|++   .|+||++||..+.
T Consensus        83 ~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~  153 (265)
T 1qsg_A           83 K------VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAE  153 (265)
T ss_dssp             T------TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT
T ss_pred             H------HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhc
Confidence            7      77899999999998642      235 788999999999999999999999999974   3899999998887


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  290 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~  290 (369)
                                          .+.++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+.........
T Consensus       154 --------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~  210 (265)
T 1qsg_A          154 --------------------RAIPNYNVMGLAKASLEANVRYMANAMG---PEGVRVNAISAGPIRTLAASGIKDFRKML  210 (265)
T ss_dssp             --------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCCCCTTGGGSTTHHHHH
T ss_pred             --------------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCCCccchhhcccccHHHH
Confidence                                6667788999999999999999999998   78999999999999999976543221111


Q ss_pred             -HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          291 -AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       291 -~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                       ......|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       211 ~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          211 AHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence             1222346778899999999999665432 25589999999887654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.5e-39  Score=294.70  Aligned_cols=235  Identities=20%  Similarity=0.262  Sum_probs=200.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.     .++.++.+|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~-   77 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVT-   77 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999999888777766653     2478899999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.|++++++.++|.|++++ .|+||++||.++.       
T Consensus        78 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  144 (260)
T 1nff_A           78 -----AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGL-------  144 (260)
T ss_dssp             -----HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhc-------
Confidence                 4578999999999863  445788999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||++++.++++++.|++   +.||+||+|+||++.|++.+ .... .   .. ..|
T Consensus       145 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~-~~~~-~---~~-~~~  202 (260)
T 1nff_A          145 -------------AGTVACHGYTATKFAVRGLTKSTALELG---PSGIRVNSIHPGLVKTPMTD-WVPE-D---IF-QTA  202 (260)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSGGGT-TSCT-T---CS-CCS
T ss_pred             -------------CCCCCchhHHHHHHHHHHHHHHHHHHhC---ccCcEEEEEEeCCCCCCccc-cchh-h---HH-hCc
Confidence                         6667788999999999999999999998   78999999999999999865 2111 0   00 234


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       203 ~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          203 LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCeecc
Confidence            567889999999999766432 24679999999987764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=294.97  Aligned_cols=238  Identities=19%  Similarity=0.224  Sum_probs=189.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999999999999888888888665  457899999999999999999998762


Q ss_pred             HhccCCCCCccEEEeccc--cc-------cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          140 LLDSDMHSSIQLLINNAG--IL-------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG--~~-------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                           .++++|+||||||  +.       .+..+.+.+.|++++++|+.+++++++.++|.|++++ .|+||++||.++.
T Consensus        80 -----~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  153 (260)
T 2qq5_A           80 -----QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSL  153 (260)
T ss_dssp             -----HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGT
T ss_pred             -----cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhc
Confidence                 1688999999995  32       3455778899999999999999999999999998765 6899999998876


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-  289 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-  289 (369)
                                          .+ ++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+........ 
T Consensus       154 --------------------~~-~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~  209 (260)
T 2qq5_A          154 --------------------QY-MFNVPYGVGKAACDKLAADCAHELR---RHGVSCVSLWPGIVQTELLKEHMAKEEVL  209 (260)
T ss_dssp             --------------------SC-CSSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEECCCSCTTTC----------
T ss_pred             --------------------CC-CCCCchHHHHHHHHHHHHHHHHHhc---cCCeEEEEEecCccccHHHHHhhcccccc
Confidence                                22 2357899999999999999999998   7899999999999999997653211100 


Q ss_pred             -HH-HH-HHHHhhCCCCHHHHHHHHHHHhcCCC--CCcccEEeCC
Q 017580          290 -MA-FT-VLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGG  329 (369)
Q Consensus       290 -~~-~~-~~~~~~~~~~~~e~A~~v~~~~l~~~--~~sG~~~~~~  329 (369)
                       .. .. ...++++..+|+|+|+.+++++....  ..+|+++..+
T Consensus       210 ~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~  254 (260)
T 2qq5_A          210 QDPVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSC  254 (260)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHH
T ss_pred             chhHHHHHHhhhccCCCHHHHHHHHHHHhcCcccccccceeechh
Confidence             00 00 11234455699999999997665432  3478888754

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-39  Score=296.25  Aligned_cols=239  Identities=20%  Similarity=0.254  Sum_probs=200.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++      .++.++++|++|+++++++++++.+ 
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~-   78 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIR-   78 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999988777665553      2378899999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           .++++|+||||||+..   +..+.+.++|++.+++|+.++++++++++|.|+++  .|+||++||..+.      
T Consensus        79 -----~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~------  145 (270)
T 1yde_A           79 -----RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGA------  145 (270)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHH------
T ss_pred             -----HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCcccc------
Confidence                 4578999999999863   34567899999999999999999999999999765  3899999998877      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hHHH-HHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SFLS-LMA  291 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----~~~~-~~~  291 (369)
                                    .+.+....|++||++++.++++++.|++   +.||+||+|+||+++|++.+...    .... ...
T Consensus       146 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  208 (270)
T 1yde_A          146 --------------IGQAQAVPYVATKGAVTAMTKALALDES---PYGVRVNCISPGNIWTPLWEELAALMPDPRASIRE  208 (270)
T ss_dssp             --------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHH
T ss_pred             --------------CCCCCCcccHHHHHHHHHHHHHHHHHhh---hhCcEEEEEEeCccccchhhhhhhcccchHHHHHH
Confidence                          5567778999999999999999999998   78999999999999999865421    1111 111


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      .....|++++.+|+|+|+.+++++......+|+.+..++|....
T Consensus       209 ~~~~~p~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          209 GMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             HHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSC
T ss_pred             HhhcCCCCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecc
Confidence            12234678889999999999977765456789999999887653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=2.6e-39  Score=296.75  Aligned_cols=240  Identities=19%  Similarity=0.279  Sum_probs=197.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch-HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+.  +.++.++.+|++|.++++++++++.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998754 55666666554  4578999999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|.  + .|+||++||..+.     
T Consensus       103 ~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-~g~iv~isS~~~~-----  168 (283)
T 1g0o_A          103 K------IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I-GGRLILMGSITGQ-----  168 (283)
T ss_dssp             H------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T-TCEEEEECCGGGT-----
T ss_pred             H------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c-CCeEEEEechhhc-----
Confidence            8      4578999999999863  345678999999999999999999999999993  2 5899999999877     


Q ss_pred             cCCCcccccccccccCCCc-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---------
Q 017580          216 QVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---------  285 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~---------  285 (369)
                                     .+.+ +...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+....         
T Consensus       169 ---------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  230 (283)
T 1g0o_A          169 ---------------AKAVPKHAVYSGSKGAIETFARCMAIDMA---DKKITVNVVAPGGIKTDMYHAVCREYIPNGENL  230 (283)
T ss_dssp             ---------------CSSCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTC
T ss_pred             ---------------cCCCCCCcchHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCcccchhhhhhhhhcccccccc
Confidence                           4444 378999999999999999999998   789999999999999998654210         


Q ss_pred             -HHHHHHHHH--HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          286 -FLSLMAFTV--LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       286 -~~~~~~~~~--~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                       .........  ..|++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       231 ~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          231 SNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             CHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence             111111111  346778899999999999766432 35789999888875

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=4.4e-39  Score=291.79  Aligned_cols=241  Identities=18%  Similarity=0.184  Sum_probs=200.0

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..+  .+.++.+|++|+++++++++++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999  99999999999999999999999975 4555556655432  37889999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      +      .++++|+||||||+..      +..+.+.+++++.+++|+.++++++++++|.|++   .|+||++||..+. 
T Consensus        82 ~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~-  151 (261)
T 2wyu_A           82 E------AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASE-  151 (261)
T ss_dssp             H------HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGT-
T ss_pred             H------HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEeccccc-
Confidence            8      4578999999999863      3447789999999999999999999999999964   3899999998887 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~  290 (369)
                                         .+.++...|++||++++.++++++.|++   +.||+||+|+||+|+|++.+........ .
T Consensus       152 -------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  209 (261)
T 2wyu_A          152 -------------------KVVPKYNVMAIAKAALEASVRYLAYELG---PKGVRVNAISAGPVRTVAARSIPGFTKMYD  209 (261)
T ss_dssp             -------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCCCCTGGGGCTTHHHHHH
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEeeCCCcCchhhhccccHHHHH
Confidence                               6667788999999999999999999998   7899999999999999997654321111 1


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ......|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       210 ~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          210 RVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCcccc
Confidence            2223346778899999999999766432 35689999989887653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.1e-39  Score=294.27  Aligned_cols=231  Identities=23%  Similarity=0.283  Sum_probs=187.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|++++++             .+.++++|++|+++++++++++.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~~~~~   83 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYKEIEE   83 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999876432             267899999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.+++++++++|+.+++.++++++|.|++++ .|+||++||.++.      
T Consensus        84 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~------  150 (253)
T 2nm0_A           84 ------THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGL------  150 (253)
T ss_dssp             ------HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCC------
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhC------
Confidence                  5689999999999863  345678899999999999999999999999998765 6899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||++++.++++++.|++   +.+|+||+|+||+|+|++.+....... .......
T Consensus       151 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~  212 (253)
T 2nm0_A          151 --------------LGSAGQANYAASKAGLVGFARSLARELG---SRNITFNVVAPGFVDTDMTKVLTDEQR-ANIVSQV  212 (253)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHHHHHHC---SSSEEEEEEEECSBCC---------CH-HHHHTTC
T ss_pred             --------------CCCCCcHHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCcCcCcchhhcCHHHH-HHHHhcC
Confidence                          6667889999999999999999999998   789999999999999999765322111 1111223


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       213 p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          213 PLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCccc
Confidence            5677889999999999766543 256899999888854

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-39  Score=304.77  Aligned_cols=243  Identities=20%  Similarity=0.220  Sum_probs=201.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC----------cchHHHHHHHHHhhcCCCcEEEEEecCCCh
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS----------SHLLSETMADITSRNKDARLEAFQVDLSSF  126 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~----------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~  126 (369)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+          .+.++++.+++...  +.++.++.+|++|+
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADW   98 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCH
Confidence            3556889999999999999999999999999999999998          77888888888765  46789999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-----CCC
Q 017580          127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPS  199 (369)
Q Consensus       127 ~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~~g  199 (369)
                      ++++++++++.+      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++.+     ..|
T Consensus        99 ~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g  172 (322)
T 3qlj_A           99 DQAAGLIQTAVE------TFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDG  172 (322)
T ss_dssp             HHHHHHHHHHHH------HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred             HHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCc
Confidence            999999999998      5588999999999874  345789999999999999999999999999987532     137


Q ss_pred             eEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          200 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       200 ~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                      +||++||.++.                    .+.++...|++||+|++.|+++++.|++   +.||+||+|+|| +.|++
T Consensus       173 ~IV~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn~v~PG-~~t~~  228 (322)
T 3qlj_A          173 RIINTSSGAGL--------------------QGSVGQGNYSAAKAGIATLTLVGAAEMG---RYGVTVNAIAPS-ARTRM  228 (322)
T ss_dssp             EEEEECCHHHH--------------------HCBTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC-TTSCC
T ss_pred             EEEEEcCHHHc--------------------cCCCCCccHHHHHHHHHHHHHHHHHHhc---ccCcEEEEecCC-CCCcc
Confidence            99999999887                    6677888999999999999999999998   789999999999 99999


Q ss_pred             cccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          280 MREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ..........    ......+..+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       229 ~~~~~~~~~~----~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          229 TETVFAEMMA----TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             SCCSCCC------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             chhhhhhhhh----ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccc
Confidence            8764322111    0111124569999999999544322 24689999999988663

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=5.6e-39  Score=288.90  Aligned_cols=231  Identities=23%  Similarity=0.291  Sum_probs=185.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++|+++++++++++.+     
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-----   70 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPA-----   70 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCT-----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHH-----
Confidence            58999999999999999999999999999999998888777666     34789999999999999999998876     


Q ss_pred             CCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          144 DMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                       .++++|+||||||+..   +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.          
T Consensus        71 -~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~----------  138 (248)
T 3asu_A           71 -EWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGS----------  138 (248)
T ss_dssp             -TTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT----------
T ss_pred             -hCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhc----------
Confidence             6789999999999852   445778999999999999999999999999998765 6899999999987          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc-CCccccc-hhHHHHHHHHHHHHh
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK-TNIMREV-PSFLSLMAFTVLKLL  298 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~-T~~~~~~-~~~~~~~~~~~~~~~  298 (369)
                                .+.++...|++||++++.++++++.|++   +.||+||+|+||+|+ |++.... .......  ......
T Consensus       139 ----------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~--~~~~~~  203 (248)
T 3asu_A          139 ----------WPYAGGNVYGATKAFVRQFSLNLRTDLH---GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA--EKTYQN  203 (248)
T ss_dssp             ----------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSCCEEEEEEECSBCC-----------------------
T ss_pred             ----------cCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeccccccCcchhhcccCchHHH--HHHHhc
Confidence                      6677888999999999999999999998   789999999999999 9986432 1110000  000111


Q ss_pred             hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017580          299 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  331 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g  331 (369)
                      ....+|+|+|+.+++++..+...+|..+....+
T Consensus       204 ~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          204 TVALTPEDVSEAVWWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             -CCBCHHHHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred             cCCCCHHHHHHHHHHHhcCCccceeeEEEEccc
Confidence            234699999999998877655667777654433

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=4.6e-39  Score=287.03  Aligned_cols=229  Identities=21%  Similarity=0.265  Sum_probs=195.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|+++++++++++.+   
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~---   76 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLE---   76 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHH---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHH---
Confidence            36899999999999999999999999999999999999999988886443 56899999999999999999999988   


Q ss_pred             ccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|+++  .+++|++||..+.         
T Consensus        77 ---~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~---------  142 (235)
T 3l77_A           77 ---RFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSA---------  142 (235)
T ss_dssp             ---HHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGS---------
T ss_pred             ---hcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhc---------
Confidence               4578999999999863  44577999999999999999999999999999654  4899999998887         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+.+....|++||+++++++++++.+     .++|+|++|+||+|+|++.+.......         ..
T Consensus       143 -----------~~~~~~~~Y~~sKaa~~~~~~~l~~~-----~~~i~v~~v~PG~v~T~~~~~~~~~~~---------~~  197 (235)
T 3l77_A          143 -----------RLIPYGGGYVSTKWAARALVRTFQIE-----NPDVRFFELRPGAVDTYFGGSKPGKPK---------EK  197 (235)
T ss_dssp             -----------SCCTTCHHHHHHHHHHHHHHHHHHHH-----CTTSEEEEEEECSBSSSTTTCCSCCCG---------GG
T ss_pred             -----------ccCCCcchHHHHHHHHHHHHHHHhhc-----CCCeEEEEEeCCccccccccccCCccc---------cc
Confidence                       66777889999999999999999544     579999999999999999876543211         12


Q ss_pred             CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017580          300 LLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  333 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~  333 (369)
                      ++.+|+|+|+.+++++..+. ...|+.+..+.++.
T Consensus       198 ~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          198 GYLKPDEIAEAVRCLLKLPKDVRVEELMLRSVYQR  232 (235)
T ss_dssp             TCBCHHHHHHHHHHHHTSCTTCCCCEEEECCTTSC
T ss_pred             CCCCHHHHHHHHHHHHcCCCCCccceEEEeecccC
Confidence            56799999999997766554 45788888777664

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=9e-39  Score=287.89  Aligned_cols=232  Identities=22%  Similarity=0.202  Sum_probs=181.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.         +.   ..+.++.+|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~---~~~~~~~~D~~d~~~~~~~~~~~~~-   70 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ---YPFATEVMDVADAAQVAQVCQRLLA-   70 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC---CSSEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc---CCceEEEcCCCCHHHHHHHHHHHHH-
Confidence            4678999999999999999999999999999999998752         11   1278899999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.++++++++++|.|++++ .|+||++||..+.       
T Consensus        71 -----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~-------  137 (250)
T 2fwm_X           71 -----ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAH-------  137 (250)
T ss_dssp             -----HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhC-------
Confidence                 5689999999999863  455778999999999999999999999999998765 6899999999987       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H-HHHH-
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M-AFTV-  294 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~-~~~~-  294 (369)
                                   .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+........ . .... 
T Consensus       138 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  201 (250)
T 2fwm_X          138 -------------TPRIGMSAYGASKAALKSLALSVGLELA---GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGF  201 (250)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCC----------------------
T ss_pred             -------------CCCCCCchHHHHHHHHHHHHHHHHHHhC---ccCCEEEEEECCcccCccccccccChhHHHHHHhhh
Confidence                         6677888999999999999999999998   7899999999999999987643111000 0 1111 


Q ss_pred             ------HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          295 ------LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       295 ------~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                            ..|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       202 ~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          202 GEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             --------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             hhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence                  346678899999999999766443 356899999888854

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=5.6e-39  Score=297.09  Aligned_cols=273  Identities=20%  Similarity=0.183  Sum_probs=215.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +..+++||+++||||+||||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++.+|++|.++++++++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   98 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSEL   98 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHH
Confidence            3446889999999999999999999999999999999999998888888876653 357899999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .++++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|.+++..++||++||..+.    
T Consensus        99 ~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~----  168 (302)
T 1w6u_A           99 IK------VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE----  168 (302)
T ss_dssp             HH------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH----
T ss_pred             HH------HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccc----
Confidence            88      5689999999999753  34467899999999999999999999999999743336899999999887    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccchhH-HHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVPSF-LSLMAF  292 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~-~~~~~~~~-~~~~~~  292 (369)
                                      .+.++...|++||++++.++++++.+++   +.||++++++||++.|+ +....... ......
T Consensus       169 ----------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  229 (302)
T 1w6u_A          169 ----------------TGSGFVVPSASAKAGVEAMSKSLAAEWG---KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEM  229 (302)
T ss_dssp             ----------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCC------CCTTSHHHHHH
T ss_pred             ----------------cCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeeccCCCcchhhhcccchhhHHHH
Confidence                            5667788999999999999999999997   78999999999999997 54433211 111111


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcc-cCCHHHHHHHHHHHHHhhhc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSAL-SFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~-~~d~~~~~~lw~~~~~~~~~  359 (369)
                      ....|++++.+|+|+|+.+++++... ...+|+.+..++|........ ....+.....|+.++++++.
T Consensus       230 ~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  298 (302)
T 1w6u_A          230 IGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELIRK  298 (302)
T ss_dssp             HTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTTC---
T ss_pred             HhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccccccChhhhccC
Confidence            22245667889999999999665432 245799999888876643332 22344567789999887754

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.2e-38  Score=288.61  Aligned_cols=245  Identities=20%  Similarity=0.295  Sum_probs=204.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++||||++|||++++++|+++|++|++++| +.+.++++.+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999 877788877777654  45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|++++..++||++||..+.      
T Consensus        82 ------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~------  149 (261)
T 1gee_A           82 ------EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK------  149 (261)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc------
Confidence                  4578999999999864  33467899999999999999999999999999876434899999998877      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~  295 (369)
                                    .+.++...|++||++++.++++++.|++   +.+|++++++||++.|++.+........ ......
T Consensus       150 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  212 (261)
T 1gee_A          150 --------------IPWPLFVHYAASKGGMKLMTETLALEYA---PKGIRVNNIGPGAINTPINAEKFADPEQRADVESM  212 (261)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT
T ss_pred             --------------CCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhc
Confidence                          6677888999999999999999999997   7899999999999999997653211111 111112


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      .|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       213 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          213 IPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcccC
Confidence            35567889999999999766432 35689999999887664

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=6.5e-39  Score=288.31  Aligned_cols=231  Identities=20%  Similarity=0.246  Sum_probs=188.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++             +..+.+|++|+++++++++++.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998764322             12488999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .++++|+||||||+..  +..+.+.+++++++++|+.++++++++++|.|++++ .|+||++||..+.      
T Consensus        78 ------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------  144 (247)
T 1uzm_A           78 ------HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGL------  144 (247)
T ss_dssp             ------HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-------
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhc------
Confidence                  4578999999999863  345789999999999999999999999999998765 6899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+....... .......
T Consensus       145 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~  206 (247)
T 1uzm_A          145 --------------WGIGNQANYAASKAGVIGMARSIARELS---KANVTANVVAPGYIDTDMTRALDERIQ-QGALQFI  206 (247)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHSCHHHH-HHHGGGC
T ss_pred             --------------cCCCCChhHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeCCCcccchhhcCHHHH-HHHHhcC
Confidence                          5667788999999999999999999998   789999999999999998765432111 1111223


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       207 p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          207 PAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence            5667889999999999766432 356899999888854

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2.2e-38  Score=286.69  Aligned_cols=243  Identities=18%  Similarity=0.216  Sum_probs=201.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.++++..  +.++.++.+|++|+++++++++++.+
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888877654  45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                            .++++|+||||||+..   +..+.+.+++++.+++|+.+++++++.++|.|++++ .++||++||..+.     
T Consensus        87 ------~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~-----  154 (260)
T 3awd_A           87 ------QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGL-----  154 (260)
T ss_dssp             ------HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-----
T ss_pred             ------HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhc-----
Confidence                  4578999999999864   345778999999999999999999999999998765 6899999998876     


Q ss_pred             cCCCcccccccccccCCCchh--hhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-cchhHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-EVPSFLSLMAF  292 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~--~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~-~~~~~~~~~~~  292 (369)
                                     .+.++.  ..|++||++++.++++++.|++   +.+|++++|+||++.|++.+ ...........
T Consensus       155 ---------------~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~  216 (260)
T 3awd_A          155 ---------------IVNRPQQQAAYNASKAGVHQYIRSLAAEWA---PHGIRANAVAPTYIETTLTRFGMEKPELYDAW  216 (260)
T ss_dssp             ---------------SCCSSSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCTTTHHHHTCHHHHHHH
T ss_pred             ---------------ccCCCCCccccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeeeeccchhhcccCChHHHHHH
Confidence                           333444  7899999999999999999997   78999999999999999876 32211111111


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       217 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  258 (260)
T 3awd_A          217 IAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFT  258 (260)
T ss_dssp             HHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HhcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCcee
Confidence            22235667889999999999766543 356899988887753

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.7e-38  Score=296.11  Aligned_cols=232  Identities=18%  Similarity=0.228  Sum_probs=188.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +.+++||+||||||+||||+++|++|+++|++|++++|+.++++++.+++...+.+.++.++.+|++|+++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999998877655689999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-----CCCCeEEEEcCCccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-----PVPSRIVNVTSFTHR  210 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----~~~g~IV~vsS~~~~  210 (369)
                      +      .++++|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|.++     +..|+||++||.++.
T Consensus        83 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~  156 (319)
T 3ioy_A           83 A------RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAF  156 (319)
T ss_dssp             H------HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGT
T ss_pred             H------hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccc
Confidence            8      6689999999999863  45577899999999999999999999999999764     126899999999998


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  290 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~  290 (369)
                                          .+.++...|++||+|+.+|+++++.|+.   +.||+|++|+||+|+|++...........
T Consensus       157 --------------------~~~~~~~~Y~aSKaal~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~  213 (319)
T 3ioy_A          157 --------------------LAAGSPGIYNTTKFAVRGLSESLHYSLL---KYEIGVSVLCPGLVKSYIYASDDIRPDAL  213 (319)
T ss_dssp             --------------------CCCSSSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEECCCCBC--------------
T ss_pred             --------------------cCCCCCHHHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEEcCeEccCcccccccCchhh
Confidence                                6778889999999999999999999998   78999999999999999976532211110


Q ss_pred             H----HHH---HHH----hhCCCCHHHHHHHHHHHhcCC
Q 017580          291 A----FTV---LKL----LGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       291 ~----~~~---~~~----~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      .    ...   ...    .....+|+++|+.++.++..+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          214 KGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             ---------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             cccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence            0    000   000    011269999999999876554

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.4e-39  Score=293.40  Aligned_cols=237  Identities=23%  Similarity=0.308  Sum_probs=188.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++ |+++||||++|||+++|++|+++|++|++++|+.++++++.+++...   .++.++.+|++|+++++++++++.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3566 89999999999999999999999999999999998888887777442   4789999999999999999998876


Q ss_pred             HHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCC-eEEEEcCCccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFN  214 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g-~IV~vsS~~~~~~~~  214 (369)
                            .++++|+||||||+..   +..+.+.+++++++++|+.|++++++.++|.|++++ .| +||++||..+.    
T Consensus        94 ------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~----  162 (272)
T 2nwq_A           94 ------EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGK----  162 (272)
T ss_dssp             ------GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGT----
T ss_pred             ------HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhc----
Confidence                  5689999999999853   445788999999999999999999999999998765 57 99999999987    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAFT  293 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~~~~~~~  293 (369)
                                      .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+... .....  ..
T Consensus       163 ----------------~~~~~~~~Y~asKaa~~~l~~~la~el~---~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~~  221 (272)
T 2nwq_A          163 ----------------WPYPGSHVYGGTKAFVEQFSLNLRCDLQ---GTGVRVTNLEPGLCESEFSLVRFGGDQAR--YD  221 (272)
T ss_dssp             ----------------SCCTTCHHHHHHHHHHHHHHHHHHTTCT---TSCCEEEEEEECSBC------------------
T ss_pred             ----------------cCCCCCchHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEEcCCCcCcchhcccccchHH--HH
Confidence                            6677888999999999999999999998   78999999999999999865321 11000  00


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  331 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g  331 (369)
                      .........+|+|+|+.+++++..+...+|..+..+.+
T Consensus       222 ~~~~~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          222 KTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             ----CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             HhhccCCCCCHHHHHHHHHHHhCCCccCccceEEEeec
Confidence            00111235799999999998776655667777765554

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.5e-38  Score=288.81  Aligned_cols=245  Identities=23%  Similarity=0.240  Sum_probs=183.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|+++.++++++++++.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888887654  45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                      .+     .+++|+||||||+..  +..+.+.+++++.+++|+.++++++++++|.|++++ .++||++||..+.      
T Consensus        88 ~~-----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~------  155 (266)
T 1xq1_A           88 MF-----GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGV------  155 (266)
T ss_dssp             HH-----TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-----------
T ss_pred             Hh-----CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhc------
Confidence            33     168999999999863  445678999999999999999999999999998765 6899999999887      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||++++.++++++.|++   +.+|++++|+||++.|++.+...............
T Consensus       156 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  218 (266)
T 1xq1_A          156 --------------VSASVGSIYSATKGALNQLARNLACEWA---SDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK  218 (266)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEECCSCC--------------------
T ss_pred             --------------cCCCCCchHHHHHHHHHHHHHHHHHHHh---HhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcC
Confidence                          5566778999999999999999999997   78999999999999999976532111111122234


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       219 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          219 PLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             -----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCccc
Confidence            6677889999999999655432 2567999999988764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.2e-38  Score=289.10  Aligned_cols=241  Identities=19%  Similarity=0.218  Sum_probs=198.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++     +.++.++.+|++|+++++++++++.+
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888777766     45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccccCC--C------CCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-----CCCeEEEEc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATS--S------RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNVT  205 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~--~------~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~~g~IV~vs  205 (369)
                            .++++|+||||||+....  .      +.+.+++++.+++|+.+++.+++.++|.|+++.     +.++||++|
T Consensus        83 ------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~is  156 (265)
T 2o23_A           83 ------KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTA  156 (265)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEEC
T ss_pred             ------HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeC
Confidence                  457899999999986432  1      368899999999999999999999999998761     268999999


Q ss_pred             CCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017580          206 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  285 (369)
Q Consensus       206 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~  285 (369)
                      |..+.                    .+.++...|++||++++.++++++.|++   +.+|+|++|+||+++|++.+..+.
T Consensus       157 S~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~  213 (265)
T 2o23_A          157 SVAAF--------------------EGQVGQAAYSASKGGIVGMTLPIARDLA---PIGIRVMTIAPGLFGTPLLTSLPE  213 (265)
T ss_dssp             CTHHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCC-------
T ss_pred             Chhhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeccccCccccccCH
Confidence            99887                    5667788999999999999999999997   789999999999999999765432


Q ss_pred             HHHHHHHHHHHHh-hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          286 FLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       286 ~~~~~~~~~~~~~-~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      ... .......|. +++.+|+|+|+.+++++. .+..+|+.+..++|....
T Consensus       214 ~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          214 KVC-NFLASQVPFPSRLGDPAEYAHLVQAIIE-NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             ----CHHHHTCSSSCSCBCHHHHHHHHHHHHH-CTTCCSCEEEESTTCCCC
T ss_pred             HHH-HHHHHcCCCcCCCCCHHHHHHHHHHHhh-cCccCceEEEECCCEecC
Confidence            111 111122344 678899999999998763 456789999888886543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=9.4e-39  Score=285.84  Aligned_cols=230  Identities=18%  Similarity=0.192  Sum_probs=190.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||++|||+++|++|+++|++|++++|++++   ..+++     +  +..+.+|+++ ++++++++++.+    
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~----   66 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G--AVPLPTDLEK-DDPKGLVKRALE----   66 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T--CEEEECCTTT-SCHHHHHHHHHH----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C--cEEEecCCch-HHHHHHHHHHHH----
Confidence            6899999999999999999999999999999999865   23333     2  6789999999 999999999888    


Q ss_pred             cCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        .++++|+||||||+..  +..+.+.+++++.+++|+.+++++++.++|.|++++ .|+||++||..+.          
T Consensus        67 --~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~----------  133 (239)
T 2ekp_A           67 --ALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTF----------  133 (239)
T ss_dssp             --HHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT----------
T ss_pred             --HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhc----------
Confidence              4578999999999863  455789999999999999999999999999998765 6899999999887          


Q ss_pred             ccccccccccCCC--chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHHHH
Q 017580          221 TITGKFFLRSKCY--PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLKL  297 (369)
Q Consensus       221 ~~~~~~~~~~~~~--~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~  297 (369)
                                .+.  ++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+........ .......|
T Consensus       134 ----------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p  200 (239)
T 2ekp_A          134 ----------TAGGPVPIPAYTTAKTALLGLTRALAKEWA---RLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP  200 (239)
T ss_dssp             ----------SCCTTSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT
T ss_pred             ----------cCCCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC
Confidence                      444  6778999999999999999999998   7899999999999999997643211111 11112235


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       201 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  237 (239)
T 2ekp_A          201 MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGFL  237 (239)
T ss_dssp             TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCcc
Confidence            678889999999999655432 256899999888853

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.8e-38  Score=285.53  Aligned_cols=240  Identities=21%  Similarity=0.208  Sum_probs=199.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||++|||++++++|+++|++|++++|+.++++++.+++.... +.++.++.+|++|+++++++++++.+    
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~----   76 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATME----   76 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHH----
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH----
Confidence            6899999999999999999999999999999999988888777762222 35789999999999999999999988    


Q ss_pred             cCCCCCccEEEeccccccC-----CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          143 SDMHSSIQLLINNAGILAT-----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                        .++++|+||||||+...     ..+.+.+++++.+++|+.+++.+++.++|.|++++ .++||++||..+.       
T Consensus        77 --~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~-------  146 (250)
T 2cfc_A           77 --QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASL-------  146 (250)
T ss_dssp             --HHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             --HhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhc-------
Confidence              45789999999998643     34668899999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~  296 (369)
                                   .+.++...|++||++++.++++++.|++   +.+|++++++||++.|++.+. ..............
T Consensus       147 -------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  210 (250)
T 2cfc_A          147 -------------VAFPGRSAYTTSKGAVLQLTKSVAVDYA---GSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARI  210 (250)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTC
T ss_pred             -------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcC
Confidence                         6667788999999999999999999997   789999999999999999754 21111111111223


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~  333 (369)
                      |++++.+|+|+|+.+++++.... ..+|+.+..++|..
T Consensus       211 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  248 (250)
T 2cfc_A          211 PQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYT  248 (250)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCcee
Confidence            56678899999999997765432 56899998888753

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=3e-38  Score=292.93  Aligned_cols=239  Identities=27%  Similarity=0.380  Sum_probs=190.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCCh-HHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~i~~~~~~i~  137 (369)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+ +.++.++.+|++|+ ++++++++.+.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999999999999999987664 45799999999998 99999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc--------------------------------CCCCCCHHhHHHhhhhhhHHHHHHH
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--------------------------------TSSRLTPEGYDQMMSTNYIGAFFLT  185 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--------------------------------~~~~~~~~~~~~~~~vN~~~~~~l~  185 (369)
                      +      .++++|+||||||+..                                +..+.+.+++++++++|+.|+++++
T Consensus        87 ~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  160 (311)
T 3o26_A           87 T------HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVT  160 (311)
T ss_dssp             H------HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred             H------hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHH
Confidence            8      4578999999999863                                2235688999999999999999999


Q ss_pred             HHHhHhhhcCCCCCeEEEEcCCccccccccc------------CCCcc-----------cccccccccCC-Cchhhhhhh
Q 017580          186 KLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ------------VNNET-----------ITGKFFLRSKC-YPCARIYEY  241 (369)
Q Consensus       186 ~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~------------~~~~~-----------~~~~~~~~~~~-~~~~~~Y~~  241 (369)
                      +.++|.|++++ .|+||++||.++.......            +....           .... .....+ .++...|++
T Consensus       161 ~~~~~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~  238 (311)
T 3o26_A          161 EVLIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKEN-LIETNGWPSFGAAYTT  238 (311)
T ss_dssp             HHHHHHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTT-CTTTTTCCSSCHHHHH
T ss_pred             HHhhHhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhcc-ccccccCcccchhhHH
Confidence            99999998776 6899999999887432110            00000           0000 000012 245678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC-C
Q 017580          242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-E  320 (369)
Q Consensus       242 SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~  320 (369)
                      ||+|++++++++++|+.     +|+|++|+||+|+|+|.+...                ..+++++|+.+++++..++ .
T Consensus       239 SK~a~~~~~~~la~e~~-----~i~v~~v~PG~v~T~~~~~~~----------------~~~~~~~a~~~~~~~~~~~~~  297 (311)
T 3o26_A          239 SKACLNAYTRVLANKIP-----KFQVNCVCPGLVKTEMNYGIG----------------NYTAEEGAEHVVRIALFPDDG  297 (311)
T ss_dssp             HHHHHHHHHHHHHHHCT-----TSEEEEECCCSBCSGGGTTCC----------------SBCHHHHHHHHHHHHTCCSSC
T ss_pred             HHHHHHHHHHHHHhhcC-----CceEEEecCCceecCCcCCCC----------------CCCHHHHHHHHHHHHhCCCCC
Confidence            99999999999999985     399999999999999986532                2499999999999888776 4


Q ss_pred             CcccEEe
Q 017580          321 TSGVYFF  327 (369)
Q Consensus       321 ~sG~~~~  327 (369)
                      .+|.||.
T Consensus       298 ~~g~~~~  304 (311)
T 3o26_A          298 PSGFFYD  304 (311)
T ss_dssp             CCSCEET
T ss_pred             CCceEec
Confidence            4566654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-39  Score=288.42  Aligned_cols=233  Identities=19%  Similarity=0.229  Sum_probs=189.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++. ++      .++.++.+|++|+++++++.+     
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~~~~~~~~~~~-----   70 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY------PGIQTRVLDVTKKKQIDQFAN-----   70 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS------TTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc------cCceEEEeeCCCHHHHHHHHH-----
Confidence            467999999999999999999999999999999999987654433 21      268899999999999884433     


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||.++.       
T Consensus        71 -----~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  137 (246)
T 2ag5_A           71 -----EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASS-------  137 (246)
T ss_dssp             -----HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT-------
T ss_pred             -----HhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhC-------
Confidence                 3578999999999863  345678999999999999999999999999998765 6899999999887       


Q ss_pred             CCcccccccccccCCCc-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHH
Q 017580          218 NNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMA  291 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-----~~~~~~  291 (369)
                                   .+.+ +...|++||++++.++++++.|++   +.||+||+|+||+++|++.+....     ......
T Consensus       138 -------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  201 (246)
T 2ag5_A          138 -------------VKGVVNRCVYSTTKAAVIGLTKSVAADFI---QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARND  201 (246)
T ss_dssp             -------------TBCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHH
T ss_pred             -------------cCCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHH
Confidence                         4445 778999999999999999999998   789999999999999998654110     111111


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       202 ~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~  244 (246)
T 2ag5_A          202 FLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (246)
T ss_dssp             HHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            122235678889999999999766432 356899999888753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.3e-38  Score=290.00  Aligned_cols=237  Identities=14%  Similarity=0.152  Sum_probs=193.4

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEeCCcch-HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        60 ~~~~k~vlITGa--s~gIG~~~a~~La~~G~~Vvl~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.++ ++++.+++     +.++.++++|++|+++++++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-----PAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-----SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-----CCCceEEEccCCCHHHHHHHHHHH
Confidence            477999999999  9999999999999999999999999765 34433322     346788999999999999999999


Q ss_pred             HHHHhccCCCC---CccEEEecccccc-------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          137 QQWLLDSDMHS---SIQLLINNAGILA-------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       137 ~~~~~~~~~~~---~id~lv~nAG~~~-------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                      .+.      ++   ++|+||||||+..       +..+.+.+++++.+++|+.++++++++++|.|++   .|+||++||
T Consensus        79 ~~~------~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss  149 (269)
T 2h7i_A           79 TEA------IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDF  149 (269)
T ss_dssp             HHH------HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEC
T ss_pred             HHH------hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcC
Confidence            884      46   8999999999864       3456789999999999999999999999999975   379999999


Q ss_pred             CcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--
Q 017580          207 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--  284 (369)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~--  284 (369)
                      ..+                     .+.+....|++||++++.++++++.|++   +.||+||+|+||+|+|++.+...  
T Consensus       150 ~~~---------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~  205 (269)
T 2h7i_A          150 DPS---------------------RAMPAYNWMTVAKSALESVNRFVAREAG---KYGVRSNLVAAGPIRTLAMSAIVGG  205 (269)
T ss_dssp             CCS---------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCHHHHHHHTT
T ss_pred             ccc---------------------cccCchHHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCcccchhhhccccc
Confidence            764                     3446678999999999999999999998   78999999999999999865431  


Q ss_pred             ---hHHH------HHHHHHHHHhh-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          285 ---SFLS------LMAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       285 ---~~~~------~~~~~~~~~~~-~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                         ....      ........|++ ++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          206 ALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             cchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence               1100      01122334677 6899999999999766432 3578999999988654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=7.3e-39  Score=287.45  Aligned_cols=227  Identities=20%  Similarity=0.190  Sum_probs=190.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-CCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~-~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++|+++||||++|||+++|++|++ .|++|++++|+++.            ....+.++++|++|+++++++++.+.   
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~---   67 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK---   67 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT---
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH---
Confidence            578999999999999999999999 78899999998651            13467899999999999999886543   


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                           ++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|+++   |+||++||..+.        
T Consensus        68 -----~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---g~iv~~sS~~~~--------  131 (244)
T 4e4y_A           68 -----NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG---ASIVFNGSDQCF--------  131 (244)
T ss_dssp             -----TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE---EEEEEECCGGGT--------
T ss_pred             -----hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC---cEEEEECCHHHc--------
Confidence                 468999999999863  55678999999999999999999999999999763   799999999988        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH----------H
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL----------S  288 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~----------~  288 (369)
                                  .+.++...|++||+++++++++|+.|++   +.||+||+|+||+|+|++.+......          .
T Consensus       132 ------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  196 (244)
T 4e4y_A          132 ------------IAKPNSFAYTLSKGAIAQMTKSLALDLA---KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEA  196 (244)
T ss_dssp             ------------CCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHH
T ss_pred             ------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHH
Confidence                        7778889999999999999999999998   78999999999999999976543221          1


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ........|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       197 ~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          197 QKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCccC
Confidence            112222346678899999999999766533 3578999999988653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=8e-39  Score=287.20  Aligned_cols=229  Identities=17%  Similarity=0.118  Sum_probs=188.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-e--CCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLV-G--RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~--r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ||+++||||++|||+++|++|+++|++|+++ +  |++++++++.+++  .  +       .|+.|+++++++++++.+ 
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~--~-------~~~~~~~~v~~~~~~~~~-   68 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--P--G-------TIALAEQKPERLVDATLQ-   68 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--T--T-------EEECCCCCGGGHHHHHGG-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--C--C-------CcccCHHHHHHHHHHHHH-
Confidence            5799999999999999999999999999999 6  9988877776654  1  2       123377788888888877 


Q ss_pred             HhccCCCCCccEEEecccccc-----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                           .++++|+||||||+..     +..+.+.+++++++++|+.++++++++++|.|++++ .|+||++||.++.    
T Consensus        69 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~----  138 (244)
T 1zmo_A           69 -----HGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGK----  138 (244)
T ss_dssp             -----GSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT----
T ss_pred             -----HcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhC----
Confidence                 6789999999999863     345788999999999999999999999999998775 6999999999987    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc---ccchhHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM---REVPSFLSLMA  291 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~---~~~~~~~~~~~  291 (369)
                                      .+.++...|++||+++++++++++.|++   +.||+||+|+||+|+|++.   +..........
T Consensus       139 ----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  199 (244)
T 1zmo_A          139 ----------------KPLAYNPLYGPARAATVALVESAAKTLS---RDGILLYAIGPNFFNNPTYFPTSDWENNPELRE  199 (244)
T ss_dssp             ----------------SCCTTCTTHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHH
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEeeCCCcCCcccccccccchHHHHH
Confidence                            6677888999999999999999999998   7899999999999999997   44321111111


Q ss_pred             HHH-HHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          292 FTV-LKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       292 ~~~-~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      ... ..|++++.+|+|+|+.+++++.... ..+|+++..++|.
T Consensus       200 ~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          200 RVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence            122 3467788999999999997665432 5689999888874

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-38  Score=289.31  Aligned_cols=242  Identities=21%  Similarity=0.299  Sum_probs=200.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.++.+|++|+++++++++++.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888887654  4578999999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..  +..+.+.+++++++++|+.|++.+++.++|.|++++ .++||++||.++.     
T Consensus       117 ~------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-----  184 (285)
T 2c07_A          117 T------EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGL-----  184 (285)
T ss_dssp             H------HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH-----
T ss_pred             H------hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhc-----
Confidence            8      5688999999999863  345778999999999999999999999999998765 6899999999877     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||++++.++++++.|++   +.||+|++|+||+++|++......... ......
T Consensus       185 ---------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~  245 (285)
T 2c07_A          185 ---------------TGNVGQANYSSSKAGVIGFTKSLAKELA---SRNITVNAIAPGFISSDMTDKISEQIK-KNIISN  245 (285)
T ss_dssp             ---------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCC-----CCHHHH-HHHHTT
T ss_pred             ---------------cCCCCCchHHHHHHHHHHHHHHHHHHHH---HhCcEEEEEEeCcEecCchhhcCHHHH-HHHHhh
Confidence                           5567788999999999999999999997   789999999999999998765432211 111122


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .+.+++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       246 ~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          246 IPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            35567889999999999766543 24689999888775

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=2.7e-38  Score=284.61  Aligned_cols=244  Identities=25%  Similarity=0.331  Sum_probs=201.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..   ..++.++.+|++|+++++++++++.+ 
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEK-   78 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            46799999999999999999999999999999999998888777766633   25789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+.+++.+++|+.+++.+++.++|.|++++..++||++||..+.       
T Consensus        79 -----~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------  146 (251)
T 1zk4_A           79 -----AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF-------  146 (251)
T ss_dssp             -----HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT-------
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhc-------
Confidence                 4578999999999863  34577899999999999999999999999999887622899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||++++.++++++.|+... +.+|++++|+||++.|++.+..+............|
T Consensus       147 -------------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  212 (251)
T 1zk4_A          147 -------------VGDPSLGAYNASKGAVRIMSKSAALDCALK-DYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTP  212 (251)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCT
T ss_pred             -------------cCCCCCccchHHHHHHHHHHHHHHHHhccc-CCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCC
Confidence                         666778899999999999999999987421 468999999999999999876532211111111235


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       213 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          213 MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence            567889999999999766543 246799998888764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-38  Score=285.29  Aligned_cols=251  Identities=21%  Similarity=0.215  Sum_probs=202.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.. +.++.++.+|++|+++++++++++.+ 
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~-   88 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDA-   88 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHH-
Confidence            5789999999999999999999999999999999998777766666665443 45789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.+++.++++++|.|.+++..++||++||..+....... 
T Consensus        89 -----~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-  162 (265)
T 1h5q_A           89 -----DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-  162 (265)
T ss_dssp             -----HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-
T ss_pred             -----hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-
Confidence                 5689999999999863  33467899999999999999999999999999876434899999998876221000 


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                  ..+..+...|++||++++.++++++.|++   +.+|+|++|+||+|+|++.+...... ........+
T Consensus       163 ------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~  226 (265)
T 1h5q_A          163 ------------LNGSLTQVFYNSSKAACSNLVKGLAAEWA---SAGIRVNALSPGYVNTDQTAHMDKKI-RDHQASNIP  226 (265)
T ss_dssp             ------------TTEECSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCGGGGGSCHHH-HHHHHHTCT
T ss_pred             ------------ccccccccccHHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCccccccccccchhH-HHHHHhcCc
Confidence                        01122367899999999999999999997   78999999999999999987643221 111122245


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       227 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          227 LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             ccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence            667889999999999766543 3568999988888653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.8e-38  Score=300.30  Aligned_cols=255  Identities=11%  Similarity=0.005  Sum_probs=203.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-CCCEEEEEeCCcchHHH------------HHHHHHhhcCCCcEEEEEecCCChHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLSE------------TMADITSRNKDARLEAFQVDLSSFQS  128 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~-~G~~Vvl~~r~~~~~~~------------~~~~~~~~~~~~~v~~~~~Dls~~~~  128 (369)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+.+++            +.+++++.  +.++..+.+|++|+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHHH
Confidence            489999999999999999999999 99999999998765432            23444443  5678899999999999


Q ss_pred             HHHHHHHHHHHHhccCCC-CCccEEEeccccc---------------cCC---------------------CCCCHHhHH
Q 017580          129 VLKFKDSLQQWLLDSDMH-SSIQLLINNAGIL---------------ATS---------------------SRLTPEGYD  171 (369)
Q Consensus       129 i~~~~~~i~~~~~~~~~~-~~id~lv~nAG~~---------------~~~---------------------~~~~~~~~~  171 (369)
                      ++++++++.+      .+ |+||+||||||+.               .+.                     .+.++++|+
T Consensus       138 v~~~v~~i~~------~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~  211 (422)
T 3s8m_A          138 RAQVIELIKT------EMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIE  211 (422)
T ss_dssp             HHHHHHHHHH------HSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHH
T ss_pred             HHHHHHHHHH------HcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHH
Confidence            9999999998      67 8999999999872               222                     257899999


Q ss_pred             HhhhhhhHHHH-HHHHHHhHh-hhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchh--hhhhhhHHHHH
Q 017580          172 QMMSTNYIGAF-FLTKLLLPL-LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCLL  247 (369)
Q Consensus       172 ~~~~vN~~~~~-~l~~~~~~~-~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~SK~a~~  247 (369)
                      +++++|..+.+ .+++.+.+. |+++  +|+||++||.++.                    .+.+.+  .+|++||+|+.
T Consensus       212 ~~v~Vn~~~~~~~~~~a~~~~~m~~~--gG~IVniSSi~g~--------------------~~~p~~~~~aY~ASKaAl~  269 (422)
T 3s8m_A          212 DTITVMGGQDWELWIDALEGAGVLAD--GARSVAFSYIGTE--------------------ITWPIYWHGALGKAKVDLD  269 (422)
T ss_dssp             HHHHHHSSHHHHHHHHHHHHTTCEEE--EEEEEEEEECCCG--------------------GGHHHHTSHHHHHHHHHHH
T ss_pred             HHHHhhchhHHHHHHHHHHHHHHhhC--CCEEEEEeCchhh--------------------ccCCCccchHHHHHHHHHH
Confidence            99999999987 788887664 4443  4899999999987                    566666  89999999999


Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCC-cccEE
Q 017580          248 IFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPET-SGVYF  326 (369)
Q Consensus       248 ~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~-sG~~~  326 (369)
                      +++++|+.|++   +.||+||+|+||+|+|++....+...... .....+++|..+|||+|+.+.+++...-.. .|..-
T Consensus       270 ~lTrsLA~Ela---~~GIRVNaVaPG~i~T~~~~~ip~~~~~~-~~~~~~m~r~G~pEdva~~v~~L~sd~ly~~~~~~~  345 (422)
T 3s8m_A          270 RTAQRLNARLA---KHGGGANVAVLKSVVTQASAAIPVMPLYI-SMVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPA  345 (422)
T ss_dssp             HHHHHHHHHHH---TTTCEEEEEEECCCCCTTGGGSTHHHHHH-HHHHHHHHHTTCCCCHHHHHHHHHHHTTTCTTCCCC
T ss_pred             HHHHHHHHHhC---ccCEEEEEEEcCCCcChhhhcCCCChHHH-HHHHhhhcCCcChHHHHHHHHHHhcchhhccCCCCc
Confidence            99999999998   89999999999999999998776544322 233457889999999999999766543232 25544


Q ss_pred             eCCCCccccCCcccCCHHHHHHHH
Q 017580          327 FGGKGRTVNSSALSFNSKLAGELW  350 (369)
Q Consensus       327 ~~~~g~~~~~~~~~~d~~~~~~lw  350 (369)
                      ..|++..+...+...+++.|.++-
T Consensus       346 ~~d~~~~~r~d~~e~~~~~q~~~~  369 (422)
T 3s8m_A          346 EVDEQNRLRLDDWELRDDVQDACK  369 (422)
T ss_dssp             CCCTTSCEESCTTTTSHHHHHHHH
T ss_pred             ccCCCCCCccchhhCCHHHHHHHH
Confidence            355555667777777887775543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.2e-38  Score=298.77  Aligned_cols=254  Identities=11%  Similarity=-0.003  Sum_probs=203.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-CCCEEEEEeCCcchHH------------HHHHHHHhhcCCCcEEEEEecCCChHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLS------------ETMADITSRNKDARLEAFQVDLSSFQS  128 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~-~G~~Vvl~~r~~~~~~------------~~~~~~~~~~~~~~v~~~~~Dls~~~~  128 (369)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            .+.+++.+.  +.++..+.+|++|+++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSDEI  123 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCHHH
Confidence            589999999999999999999999 9999999998765432            223344443  5578899999999999


Q ss_pred             HHHHHHHHHHHHhccCCCCCccEEEeccccc---------------cCC---------------------CCCCHHhHHH
Q 017580          129 VLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---------------ATS---------------------SRLTPEGYDQ  172 (369)
Q Consensus       129 i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~---------------~~~---------------------~~~~~~~~~~  172 (369)
                      ++++++++.+      .+|++|+||||||+.               .+.                     .+.++++|++
T Consensus       124 v~~~v~~i~~------~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~  197 (405)
T 3zu3_A          124 KQLTIDAIKQ------DLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDS  197 (405)
T ss_dssp             HHHHHHHHHH------HTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHH
T ss_pred             HHHHHHHHHH------HcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHH
Confidence            9999999998      678999999999974               233                     5679999999


Q ss_pred             hhhhhhHHHH-HHHHHHhH-hhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchh--hhhhhhHHHHHH
Q 017580          173 MMSTNYIGAF-FLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCLLI  248 (369)
Q Consensus       173 ~~~vN~~~~~-~l~~~~~~-~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~SK~a~~~  248 (369)
                      ++++|..+.+ ++++++.+ .|++.  +|+||++||+++.                    .+.+.+  .+|++||+++.+
T Consensus       198 ~v~Vn~~~~~~~~~~~~~~~~m~~~--gG~IVniSSi~~~--------------------~~~p~~~~~aY~AaKaal~~  255 (405)
T 3zu3_A          198 TVAVMGGEDWQMWIDALLDAGVLAE--GAQTTAFTYLGEK--------------------ITHDIYWNGSIGAAKKDLDQ  255 (405)
T ss_dssp             HHHHHSSHHHHHHHHHHHHHTCEEE--EEEEEEEECCCCG--------------------GGTTTTTTSHHHHHHHHHHH
T ss_pred             HHHhhchhHHHHHHHHHHHHhhhhC--CcEEEEEeCchhh--------------------CcCCCccchHHHHHHHHHHH
Confidence            9999999998 77887765 45543  4899999999987                    556666  899999999999


Q ss_pred             HHHHHHHHhCCCCCC-CeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          249 FSYELHRNLGLDKSR-HVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       249 ~~~~la~el~~~~~~-~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      ++++|+.|++   +. ||+||+|+||.+.|++....+..... ......++++..+||++|+.+.+++  ++.-.|.-..
T Consensus       256 ltrsLA~Ela---~~~GIRVNaVaPG~i~T~~s~~ip~~p~y-~~~l~~~mkr~G~~Ed~a~~i~~L~--sd~l~~~~~~  329 (405)
T 3zu3_A          256 KVLAIRESLA---AHGGGDARVSVLKAVVSQASSAIPMMPLY-LSLLFKVMKEKGTHEGCIEQVYSLY--KDSLCGDSPH  329 (405)
T ss_dssp             HHHHHHHHHH---TTTSCEEEEEECCCCCCHHHHTSTTHHHH-HHHHHHHHHHHTCCCCHHHHHHHHH--HHTTSSSCCC
T ss_pred             HHHHHHHHhC---cccCeEEEEEEeCCCcCchhhcCCCCcHH-HHHHHHHHhcCCCcHHHHHHHHHHH--hccccCCCCC
Confidence            9999999998   88 99999999999999998877643322 2233447888999999999999655  4344455554


Q ss_pred             CCCCccccCCcccCCHHHHHHHHH
Q 017580          328 GGKGRTVNSSALSFNSKLAGELWT  351 (369)
Q Consensus       328 ~~~g~~~~~~~~~~d~~~~~~lw~  351 (369)
                      .|++..+...+...+++.|.++-+
T Consensus       330 ~D~~~~~r~d~~e~~~~~q~~~~~  353 (405)
T 3zu3_A          330 MDQEGRLRADYKELDPEVQNQVQQ  353 (405)
T ss_dssp             BCTTSCEECCHHHHCHHHHHHHHH
T ss_pred             cCCCcCCCCchhhcCHHHHHHHHH
Confidence            566666666666677777754433

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.6e-39  Score=304.46  Aligned_cols=242  Identities=15%  Similarity=0.139  Sum_probs=193.8

Q ss_pred             CCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCc---------chHHHHHHHHHhh-cCCCcEEEEEecCCCh--H
Q 017580           62 KRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSS---------HLLSETMADITSR-NKDARLEAFQVDLSSF--Q  127 (369)
Q Consensus        62 ~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~---------~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~--~  127 (369)
                      ++|++|||||++  |||+++|++|+++|++|++++|++         ++++...+.+... .....+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            378999999985  999999999999999999877664         2222221111111 1123478899999988  8


Q ss_pred             ------------------HHHHHHHHHHHHHhccCCCCCccEEEeccccc----cCCCCCCHHhHHHhhhhhhHHHHHHH
Q 017580          128 ------------------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLT  185 (369)
Q Consensus       128 ------------------~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~l~  185 (369)
                                        +++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|+++++
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~------~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  154 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQ------KYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLC  154 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHH------HHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHH------hcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence                              99999999998      558899999999974    34567899999999999999999999


Q ss_pred             HHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchhh-hhhhhHHHHHHHHHHHHHHhCCCCC-C
Q 017580          186 KLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR-IYEYSKLCLLIFSYELHRNLGLDKS-R  263 (369)
Q Consensus       186 ~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~SK~a~~~~~~~la~el~~~~~-~  263 (369)
                      ++++|.|+++   |+||++||.++.                    .+.+... .|++||+|+.+|+++|+.|++   + .
T Consensus       155 ~~~~p~m~~~---g~Iv~isS~~~~--------------------~~~~~~~~~Y~asKaal~~~~~~la~el~---~~~  208 (329)
T 3lt0_A          155 KYFVNIMKPQ---SSIISLTYHASQ--------------------KVVPGYGGGMSSAKAALESDTRVLAYHLG---RNY  208 (329)
T ss_dssp             HHHGGGEEEE---EEEEEEECGGGT--------------------SCCTTCTTTHHHHHHHHHHHHHHHHHHHH---HHH
T ss_pred             HHHHHHHhhC---CeEEEEeCcccc--------------------CCCCcchHHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence            9999999874   899999999988                    6677775 999999999999999999997   6 7


Q ss_pred             CeEEEEecCCcccCCccccchhHH--------------------------------------------HHHHHHHHHHhh
Q 017580          264 HVSVIAADPGVVKTNIMREVPSFL--------------------------------------------SLMAFTVLKLLG  299 (369)
Q Consensus       264 ~i~v~~v~PG~v~T~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~  299 (369)
                      ||+||+|+||+|+|+|.+......                                            .........|++
T Consensus       209 gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  288 (329)
T 3lt0_A          209 NIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLR  288 (329)
T ss_dssp             CCEEEEEEECCCCCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSC
T ss_pred             CeEEEEEecceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCccc
Confidence            999999999999999987642100                                            012233345778


Q ss_pred             CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          300 LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      |+.+|+|+|+.+++++... ...+|+.+..++|..+.
T Consensus       289 r~~~peevA~~v~fL~s~~a~~itG~~i~vdGG~~~~  325 (329)
T 3lt0_A          289 QKLLSTDIGSVASFLLSRESRAITGQTIYVDNGLNIM  325 (329)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CcCCHHHHHHHHHHHhCchhccccCcEEEEcCCeeEE
Confidence            8999999999999665422 35789999999998763

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=7.4e-38  Score=282.29  Aligned_cols=244  Identities=19%  Similarity=0.228  Sum_probs=203.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|+++++++++++.+ 
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   84 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAIS-   84 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999998888888887654  45788999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccccC-CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          140 LLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                           .++++|+||||||+... ..+.+.+++++.+++|+.+++++++.++|.|++++ .++||++||..+.        
T Consensus        85 -----~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~--------  150 (255)
T 1fmc_A           85 -----KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE--------  150 (255)
T ss_dssp             -----HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             -----hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc--------
Confidence                 45789999999998643 22678999999999999999999999999998765 6899999999887        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++...|++||++++.++++++.|++   +.+|++++++||++.|++.+...............|+
T Consensus       151 ------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  215 (255)
T 1fmc_A          151 ------------NKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI  215 (255)
T ss_dssp             ------------CCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS
T ss_pred             ------------CCCCCCcccHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc
Confidence                        5667788999999999999999999997   7899999999999999987653211111111222355


Q ss_pred             hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          299 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      +++.+|+|+|+.+++++... ...+|+.|..++|....
T Consensus       216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          216 RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             ccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceecc
Confidence            67889999999999766432 24578888888887653

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.2e-38  Score=290.26  Aligned_cols=231  Identities=22%  Similarity=0.271  Sum_probs=189.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++|.++++++++++.+  
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~--   75 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLA--   75 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHH--
Confidence            46899999999999999999999999999999999998887766543     45789999999999999999999988  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|+||||||+.  .+..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||..+.        
T Consensus        76 ----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~--------  142 (281)
T 3m1a_A           76 ----RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQ--------  142 (281)
T ss_dssp             ----HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             ----hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccc--------
Confidence                457899999999986  3456789999999999999999999999999998765 6899999999988        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--------hhHHHH-
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--------PSFLSL-  289 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--------~~~~~~-  289 (369)
                                  .+.++...|++||++++.++++++.|++   +.||+|++|+||+|+|++....        +..... 
T Consensus       143 ------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  207 (281)
T 3m1a_A          143 ------------LSFAGFSAYSATKAALEQLSEGLADEVA---PFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKV  207 (281)
T ss_dssp             ------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHH
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCccccccccccccccCCcchhhHHHh
Confidence                        6778889999999999999999999998   7899999999999999985431        111111 


Q ss_pred             ---HHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          290 ---MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       290 ---~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                         .......+.+++.+|+|+|+++++++... ...+.|+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~-~~~~~~~l  247 (281)
T 3m1a_A          208 GPTRQLVQGSDGSQPGDPAKAAAAIRLALDTE-KTPLRLAL  247 (281)
T ss_dssp             HHHHHHHHC-----CBCHHHHHHHHHHHHHSS-SCCSEEEE
T ss_pred             HHHHHHHhhccCCCCCCHHHHHHHHHHHHhCC-CCCeEEec
Confidence               11112234557889999999999765443 33344444

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=6e-38  Score=277.66  Aligned_cols=214  Identities=21%  Similarity=0.208  Sum_probs=183.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+                      +|++|+++++++++++   
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~---   57 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI---   57 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH---
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh---
Confidence            467899999999999999999999999999999999754                      8999999999888743   


Q ss_pred             HhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                             +++|+||||||+.   .+..+.+.+++++.+++|+.++++++++++|.|++   .|+||++||..+.      
T Consensus        58 -------g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~------  121 (223)
T 3uce_A           58 -------GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSR------  121 (223)
T ss_dssp             -------CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGT------
T ss_pred             -------CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhc------
Confidence                   6799999999976   34567899999999999999999999999999976   3799999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH---HHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS---LMAFT  293 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~---~~~~~  293 (369)
                                    .+.++...|++||++++.++++++.|++   +  |+||+|+||+++|++.+.......   .....
T Consensus       122 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  182 (223)
T 3uce_A          122 --------------KVVANTYVKAAINAAIEATTKVLAKELA---P--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQ  182 (223)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---T--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHH
T ss_pred             --------------cCCCCchHHHHHHHHHHHHHHHHHHhhc---C--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHh
Confidence                          7778889999999999999999999996   4  999999999999999877543221   12233


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      ...|++++.+|+|+|+++++++. +...+|+.+..++|..+
T Consensus       183 ~~~~~~~~~~~~dvA~~~~~l~~-~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          183 SHLPVGKVGEASDIAMAYLFAIQ-NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             HHSTTCSCBCHHHHHHHHHHHHH-CTTCCSCEEEESTTGGG
T ss_pred             hcCCCCCccCHHHHHHHHHHHcc-CCCCCCcEEEecCCeec
Confidence            34577888999999999997765 45778999999988654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.8e-37  Score=283.43  Aligned_cols=244  Identities=21%  Similarity=0.277  Sum_probs=201.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|+++++++++++.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998877776666522   23789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                            .++++|+||||||+..    +..+.+.+.+++.+++|+.+++.+++.++|.|++++ .++||++||..+.    
T Consensus        89 ------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~----  157 (278)
T 2bgk_A           89 ------KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSF----  157 (278)
T ss_dssp             ------HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGT----
T ss_pred             ------HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeecccc----
Confidence                  4578999999999863    345778899999999999999999999999998765 6899999999887    


Q ss_pred             ccCCCcccccccccccCCCc-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHH-H
Q 017580          215 AQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLM-A  291 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~-~  291 (369)
                                      .+.+ +...|++||++++.++++++.|++   +.||++++|+||++.|++.+.... ..... .
T Consensus       158 ----------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  218 (278)
T 2bgk_A          158 ----------------TAGEGVSHVYTATKHAVLGLTTSLCTELG---EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEE  218 (278)
T ss_dssp             ----------------CCCTTSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHH
T ss_pred             ----------------CCCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeceecchhhhhhcccchhHHHH
Confidence                            4445 677899999999999999999997   789999999999999999765421 11111 1


Q ss_pred             HHHH--HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          292 FTVL--KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 ~~~~--~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ....  .+.+++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       219 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          219 LAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             HHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCccccc
Confidence            1111  12356889999999999766443 35689999999887764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.8e-37  Score=283.86  Aligned_cols=240  Identities=18%  Similarity=0.188  Sum_probs=201.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.+++.+++...  +.++.++.+|++|.++++++++++.+ 
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-  107 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEK-  107 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999988887777776554  45789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEeccccccC---CC-CCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILAT---SS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~---~~-~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                           .++++|+||||||+...   .. +.+.+++++.+++|+.+++.+++.++|.|++++ .++||++||..+.     
T Consensus       108 -----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~-----  176 (279)
T 3ctm_A          108 -----DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGK-----  176 (279)
T ss_dssp             -----HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTS-----
T ss_pred             -----HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhc-----
Confidence                 45789999999998633   33 667899999999999999999999999998765 6899999999876     


Q ss_pred             cCCCcccccccccccCC--CchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKC--YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~--~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                     .+  .++...|++||++++.++++++.|++   +.+ +|++|+||+++|++.+...... .....
T Consensus       177 ---------------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~-~v~~v~Pg~v~t~~~~~~~~~~-~~~~~  236 (279)
T 3ctm_A          177 ---------------IVNIPQLQAPYNTAKAACTHLAKSLAIEWA---PFA-RVNTISPGYIDTDITDFASKDM-KAKWW  236 (279)
T ss_dssp             ---------------CC---CCHHHHHHHHHHHHHHHHHHHHHTT---TTC-EEEEEEECSBSSTTTSSCCHHH-HHHHH
T ss_pred             ---------------cCCCCCCcccHHHHHHHHHHHHHHHHHHhc---ccC-CEEEEeccCCccccccccChHH-HHHHH
Confidence                           44  56788999999999999999999997   678 9999999999999975433221 11222


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ...|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       237 ~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          237 QLTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HhCCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            3346678899999999999766543 356899998888854

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=2.1e-37  Score=279.29  Aligned_cols=239  Identities=20%  Similarity=0.259  Sum_probs=197.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcE-EEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARL-EAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v-~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++++|+++||||+||||+++|++|+++|++|++++|++++++++.+++     +.++ .++.+|++|+++++++++++.
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988887777666     3356 889999999999999999887


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      + +      +++|+||||||+..  +..+.+.+.+++.+++|+.|++.+++.++|.|++++ .++||++||..+.     
T Consensus        82 ~-~------~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-----  148 (254)
T 2wsb_A           82 A-V------APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGT-----  148 (254)
T ss_dssp             H-H------SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-----
T ss_pred             h-h------CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhc-----
Confidence            6 3      67999999999863  445778999999999999999999999999998765 6899999998876     


Q ss_pred             cCCCcccccccccccCCCchh--hhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHH
Q 017580          216 QVNNETITGKFFLRSKCYPCA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAF  292 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~--~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~  292 (369)
                                     .+.+..  ..|++||++++.++++++.|++   +.+|++++|+||++.|++.+........ ...
T Consensus       149 ---------------~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  210 (254)
T 2wsb_A          149 ---------------IVNRPQFASSYMASKGAVHQLTRALAAEWA---GRGVRVNALAPGYVATEMTLKMRERPELFETW  210 (254)
T ss_dssp             ---------------SCCSSSCBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSHHHHHHHTCHHHHHHH
T ss_pred             ---------------cCCCCCcchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEecccCchhhhccccChHHHHHH
Confidence                           334444  7899999999999999999997   7899999999999999987643211111 111


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      ....|.+++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  252 (254)
T 2wsb_A          211 LDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGYT  252 (254)
T ss_dssp             HHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCEe
Confidence            22235567889999999999766442 356899998887753

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-37  Score=282.62  Aligned_cols=242  Identities=19%  Similarity=0.195  Sum_probs=196.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+...+.++.++.+|++|+++++++++++.+  
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--   82 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD--   82 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH--
Confidence            578999999999999999999999999999999999988888777776543345789999999999999999999988  


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|+||||||+..      .+.+++.+++|+.+++.+++.++|.|++++  ..|+||++||..+.        
T Consensus        83 ----~~g~id~lv~~Ag~~~------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------  144 (267)
T 2gdz_A           83 ----HFGRLDILVNNAGVNN------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL--------  144 (267)
T ss_dssp             ----HHSCCCEEEECCCCCC------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT--------
T ss_pred             ----HcCCCCEEEECCCCCC------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcccc--------
Confidence                4578999999999752      467899999999999999999999997652  14899999999887        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHH--HHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-------
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYEL--HRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-------  289 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l--a~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-------  289 (369)
                                  .+.++...|++||++++.+++++  +.|++   +.+|+||+|+||+++|++..........       
T Consensus       145 ------------~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  209 (267)
T 2gdz_A          145 ------------MPVAQQPVYCASKHGIVGFTRSAALAANLM---NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYK  209 (267)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGH
T ss_pred             ------------CCCCCCchHHHHHHHHHHHHHHHHHHHHhc---cCCcEEEEEecCcCcchhhhccccccccchhhhHH
Confidence                        66677889999999999999995  68887   7899999999999999986543211100       


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSA  338 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~  338 (369)
                      .......+..++.+|+|+|+.+++++.. +..+|+.+..+++......+
T Consensus       210 ~~~~~~~~~~~~~~~~dvA~~v~~l~s~-~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          210 DHIKDMIKYYGILDPPLIANGLITLIED-DALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHHHHHHHCCBCHHHHHHHHHHHHHC-TTCSSCEEEEETTTEEEECC
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHhcC-cCCCCcEEEecCCCcccccC
Confidence            0011112233567999999999976543 35789998888777654433

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=6.2e-38  Score=281.02  Aligned_cols=237  Identities=24%  Similarity=0.316  Sum_probs=199.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEE-EeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ||+++||||++|||++++++|+++|++|++ .+|+.++.+++.++++..  +.++.++.+|++|+++++++++++.+   
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---   75 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAID---   75 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHH---
Confidence            589999999999999999999999999998 489988888887777654  45789999999999999999999988   


Q ss_pred             ccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .++++|++|||||+...  ..+.+.+.+++.+++|+.+++++++.++|.|++++ .++||++||..+.         
T Consensus        76 ---~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~---------  142 (244)
T 1edo_A           76 ---AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGL---------  142 (244)
T ss_dssp             ---HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH---------
T ss_pred             ---HcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhc---------
Confidence               56899999999998643  34678899999999999999999999999998765 6899999999877         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+.++...|++||++++.++++++.|++   +.+|++++++||++.|++.+....... .......|.+
T Consensus       143 -----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~  207 (244)
T 1edo_A          143 -----------IGNIGQANYAAAKAGVIGFSKTAAREGA---SRNINVNVVCPGFIASDMTAKLGEDME-KKILGTIPLG  207 (244)
T ss_dssp             -----------HCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCSHHHHTTCHHHH-HHHHTSCTTC
T ss_pred             -----------CCCCCCccchhhHHHHHHHHHHHHHHhh---hcCCEEEEEeeCccccchhhhcChHHH-HHHhhcCCCC
Confidence                       5567788999999999999999999997   789999999999999999766432211 1111123556


Q ss_pred             CCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCc
Q 017580          300 LLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGR  332 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~--~~sG~~~~~~~g~  332 (369)
                      ++.+|+|+|+.+++++..+.  ..+|+.+..++|.
T Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          208 RTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             SCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             CCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            78899999999997664432  4579999888774

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=6.2e-38  Score=281.58  Aligned_cols=239  Identities=23%  Similarity=0.309  Sum_probs=184.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++|+++||||++|||++++++|+++|++|+++ .|+++.+++..+++...  +.++.++.+|++|+++++++++++.+ 
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   79 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMD-   79 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHH-
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999 67888888887777654  45789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.+.+++++.+++|+.+++++++.++|.|++++ .++||++||..+.       
T Consensus        80 -----~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  146 (247)
T 2hq1_A           80 -----AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGI-------  146 (247)
T ss_dssp             -----HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------
T ss_pred             -----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhc-------
Confidence                 4578999999999863  344668889999999999999999999999998765 6899999998877       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||++++.++++++.|++   +.+|++++++||+++|++....+.... .......|
T Consensus       147 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~  209 (247)
T 2hq1_A          147 -------------IGNAGQANYAASKAGLIGFTKSIAKEFA---AKGIYCNAVAPGIIKTDMTDVLPDKVK-EMYLNNIP  209 (247)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSCHHHH-HHHHTTST
T ss_pred             -------------cCCCCCcHhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEEEEEEeccchhhcchHHH-HHHHhhCC
Confidence                         5667788999999999999999999997   789999999999999998765433211 11112235


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .+++.+|+|+|+.+++++... ...+|+.|..++|.
T Consensus       210 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          210 LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            567889999999999766443 34678888888775

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.5e-38  Score=280.50  Aligned_cols=218  Identities=21%  Similarity=0.194  Sum_probs=175.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++.+|+++.++++++++++.+     
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-----   71 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDS-----   71 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSS-----
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhh-----
Confidence            68999999999999999999999999999999998887776665     45788999999999999998886543     


Q ss_pred             CCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                          ..|++|||||+..  +..+.+.+++++++++|+.|++++++.++|.|++++  ++||++||..+.           
T Consensus        72 ----~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~-----------  134 (230)
T 3guy_A           72 ----IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAAQ-----------  134 (230)
T ss_dssp             ----CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGGT-----------
T ss_pred             ----cCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeecccC-----------
Confidence                3499999999863  345779999999999999999999999999998875  599999999988           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                               .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+.....         .+.+++
T Consensus       135 ---------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~  193 (230)
T 3guy_A          135 ---------QPKAQESTYCAVKWAVKGLIESVRLELK---GKPMKIIAVYPGGMATEFWETSGKS---------LDTSSF  193 (230)
T ss_dssp             ---------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSSCEEEEEEECCC-------------------------C
T ss_pred             ---------CCCCCCchhHHHHHHHHHHHHHHHHHHH---hcCeEEEEEECCcccChHHHhcCCC---------CCcccC
Confidence                     7778889999999999999999999998   8899999999999999997654321         235578


Q ss_pred             CCHHHHHHHHHHHhcCCC--CCcccEEeCC
Q 017580          302 QSPEKGINSVLDAALAPP--ETSGVYFFGG  329 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~~~--~~sG~~~~~~  329 (369)
                      .+|+|+|+.+++++..++  ..+|+.+..+
T Consensus       194 ~~~~dvA~~i~~l~~~~~~~~itg~~~~~~  223 (230)
T 3guy_A          194 MSAEDAALMIHGALANIGNGYVSDITVNRE  223 (230)
T ss_dssp             CCHHHHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred             CCHHHHHHHHHHHHhCcCCCCccceeecCC
Confidence            899999999996554333  3456666543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.7e-37  Score=278.84  Aligned_cols=241  Identities=25%  Similarity=0.333  Sum_probs=201.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++.+.. +.++.++.+|++|+++++++++++.+ 
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~-   81 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYN-   81 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            4678999999999999999999999999999999999988888877775532 45789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.+++++++.++|.|++++ .++||++||..+.       
T Consensus        82 -----~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  148 (248)
T 2pnf_A           82 -----LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGF-------  148 (248)
T ss_dssp             -----HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHH-------
T ss_pred             -----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhc-------
Confidence                 5688999999999864  334678999999999999999999999999998765 6899999998776       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||++++.++++++.|++   +.+|++++++||++.|++......... .......|
T Consensus       149 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~  211 (248)
T 2pnf_A          149 -------------TGNVGQVNYSTTKAGLIGFTKSLAKELA---PRNVLVNAVAPGFIETDMTAVLSEEIK-QKYKEQIP  211 (248)
T ss_dssp             -------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCGGGGGSCHHHH-HHHHHTCT
T ss_pred             -------------CCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeceecCchhhhccHHHH-HHHHhcCC
Confidence                         4556778999999999999999999997   789999999999999999765432211 11112235


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .+++.+|+|+|+.+++++... ...+|+.|..++|.
T Consensus       212 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          212 LGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence            567889999999999776543 35678888877764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=5.9e-38  Score=283.21  Aligned_cols=231  Identities=19%  Similarity=0.186  Sum_probs=190.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||++|||+++|++|+++|++|++++|+.++++++.+ +...+  .++..+     |+++++++++++.+     
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~--~~~~~~-----d~~~v~~~~~~~~~-----   68 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETY--PQLKPM-----SEQEPAELIEAVTS-----   68 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHC--TTSEEC-----CCCSHHHHHHHHHH-----
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcC--CcEEEE-----CHHHHHHHHHHHHH-----
Confidence            689999999999999999999999999999999988877665 65542  344433     67788888998887     


Q ss_pred             CCCCCccEEEeccccc-c--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          144 DMHSSIQLLINNAGIL-A--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~-~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                       .++++|+||||||+. .  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+.          
T Consensus        69 -~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~----------  136 (254)
T 1zmt_A           69 -AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPF----------  136 (254)
T ss_dssp             -HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTT----------
T ss_pred             -HhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccc----------
Confidence             457899999999986 2  345778999999999999999999999999998765 6899999999987          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc---------cCCccccchhHHHHHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV---------KTNIMREVPSFLSLMA  291 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v---------~T~~~~~~~~~~~~~~  291 (369)
                                .+.++...|++||++++.++++++.|++   +.||+||+|+||+|         +|++.+..+...  ..
T Consensus       137 ----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~--~~  201 (254)
T 1zmt_A          137 ----------GPWKELSTYTSARAGACTLANALSKELG---EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHV--AH  201 (254)
T ss_dssp             ----------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHH--HH
T ss_pred             ----------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCccccccccccCCCcccccChHHH--HH
Confidence                      6677888999999999999999999998   78999999999999         888765432211  11


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  334 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~  334 (369)
                      .....|++++.+|+|+|+.+++++.... ..+|+++..++|...
T Consensus       202 ~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          202 VKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             HHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCCC
T ss_pred             HhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCchh
Confidence            2223466788999999999997665432 568999999988654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.9e-38  Score=284.05  Aligned_cols=246  Identities=22%  Similarity=0.271  Sum_probs=194.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc-----CCCcEEEEEecCCChHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-----KDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~-----~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+     +..++.++.+|++|+++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999999888877766654432     12568899999999999999999


Q ss_pred             HHHHHHhccCCCCCc-cEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          135 SLQQWLLDSDMHSSI-QLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       135 ~i~~~~~~~~~~~~i-d~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      ++.+      .++++ |+||||||+..  +..+.+.+++++.+++|+.|+++++++++|.|.+++..|+||++||..+. 
T Consensus        84 ~~~~------~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-  156 (264)
T 2pd6_A           84 QVQA------CFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGK-  156 (264)
T ss_dssp             HHHH------HHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH-
T ss_pred             HHHH------HhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhc-
Confidence            9988      45778 99999999863  33467899999999999999999999999999765324899999999877 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  291 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~  291 (369)
                                         .+.++...|++||++++.++++++.|++   +.+|++++++||++.|++.+....... ..
T Consensus       157 -------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~  213 (264)
T 2pd6_A          157 -------------------VGNVGQTNYAASKAGVIGLTQTAARELG---RHGIRCNSVLPGFIATPMTQKVPQKVV-DK  213 (264)
T ss_dssp             -------------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSCC-----------C
T ss_pred             -------------------cCCCCChhhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeecccccchhhcCHHHH-HH
Confidence                               5667788999999999999999999997   789999999999999998765322110 00


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      .....|.+++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       214 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          214 ITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             TGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC---
T ss_pred             HHHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceec
Confidence            111134567789999999999766432 35679999888887653

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-37  Score=275.50  Aligned_cols=229  Identities=25%  Similarity=0.353  Sum_probs=195.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +|+++||||++|||++++++|+++|+       +|++++|+.++++++.+++...  +.++.++.+|++|++++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHH
Confidence            68999999999999999999999999       9999999998888888777654  45789999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +.+      .++++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|++++ .++||++||..+.   
T Consensus        80 ~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~---  149 (244)
T 2bd0_A           80 IVE------RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAAT---  149 (244)
T ss_dssp             HHH------HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT---
T ss_pred             HHH------hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhc---
Confidence            988      5688999999999863  334678999999999999999999999999998665 6899999999887   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       .+.++...|++||++++.++++++.|++   +.||++++++||++.|++.+......      
T Consensus       150 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~------  203 (244)
T 2bd0_A          150 -----------------KAFRHSSIYCMSKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMWGKVDDEM------  203 (244)
T ss_dssp             -----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCSTTTCCCCSTT------
T ss_pred             -----------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---ccCcEEEEEECCCccchhhhhccccc------
Confidence                             6677788999999999999999999998   78999999999999999976543211      


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~  333 (369)
                          ..++.+|+|+|+.+++++.... ...|..+..+.++.
T Consensus       204 ----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~  240 (244)
T 2bd0_A          204 ----QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGD  240 (244)
T ss_dssp             ----GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCC
T ss_pred             ----cccCCCHHHHHHHHHHHHhCCccccchheEEeccccc
Confidence                1257799999999998775443 44566666555433

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.8e-37  Score=308.19  Aligned_cols=251  Identities=21%  Similarity=0.221  Sum_probs=197.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|++|+++|++|++.+|+  .++++.+++.+.  +.++..+.+|++  ++.+++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHH
Confidence            36889999999999999999999999999999999874  245666677654  446778888884  445677888877


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            .+++||+||||||+.  .+..++++++|++++++|+.|+++++++++|+|++++ .|+||++||.++.      
T Consensus       392 ------~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~------  458 (604)
T 2et6_A          392 ------KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGI------  458 (604)
T ss_dssp             ------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHH------
T ss_pred             ------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhc------
Confidence                  458999999999986  3556889999999999999999999999999998775 6999999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++...|++||+|+.+|+++|+.|++   +.||+||+|+||. +|+|.......          
T Consensus       459 --------------~~~~~~~~Y~asKaal~~lt~~la~El~---~~gIrVn~v~PG~-~T~m~~~~~~~----------  510 (604)
T 2et6_A          459 --------------YGNFGQANYSSSKAGILGLSKTMAIEGA---KNNIKVNIVAPHA-ETAMTLSIMRE----------  510 (604)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECC-CCCC-----------------
T ss_pred             --------------cCCCCChhHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEcCCC-CCccccccCch----------
Confidence                          6778889999999999999999999998   8899999999995 99997542111          


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc----------CCcccCCHHHHHHHHHHHHHh
Q 017580          297 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN----------SSALSFNSKLAGELWTTSCNL  356 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~----------~~~~~~d~~~~~~lw~~~~~~  356 (369)
                      ......+|+|+|..+++++......+|+.+..++|....          +.....+.+...+.|+.+.+.
T Consensus       511 ~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  580 (604)
T 2et6_A          511 QDKNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDF  580 (604)
T ss_dssp             --CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred             hhccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcc
Confidence            012346999999999954432223689999888886431          122234666666778765544

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-37  Score=285.07  Aligned_cols=246  Identities=20%  Similarity=0.235  Sum_probs=200.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc---CCCcEEEEEecCCChHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN---KDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~---~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++....   .+.++.++.+|++|++++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888888886521   245799999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +.+      .++++|+||||||+..  +..+.+.+++++.+++|+.|+++++++++|.+.+++ .++||++||.+ .   
T Consensus        94 ~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~---  162 (303)
T 1yxm_A           94 TLD------TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-K---  162 (303)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-T---
T ss_pred             HHH------HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-c---
Confidence            988      4578999999999753  345678999999999999999999999999654433 58999999987 5   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc-ccchh--HHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM-REVPS--FLSLM  290 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~-~~~~~--~~~~~  290 (369)
                                       .+.+....|++||+++..++++++.|+.   +.||++++|+||++.|++. .....  .....
T Consensus       163 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  222 (303)
T 1yxm_A          163 -----------------AGFPLAVHSGAARAGVYNLTKSLALEWA---CSGIRINCVAPGVIYSQTAVENYGSWGQSFFE  222 (303)
T ss_dssp             -----------------TCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT
T ss_pred             -----------------cCCCcchhhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCCcccchhhhhccccchHHHH
Confidence                             5667778999999999999999999997   7899999999999999953 22111  00000


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ......|.+++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       223 ~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          223 GSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             TGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHhcCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            1111235567889999999999766432 35689999999887653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-37  Score=278.66  Aligned_cols=232  Identities=21%  Similarity=0.220  Sum_probs=184.9

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ++..+++||+++||||++|||+++|++|+++|++|++++|+++..    +++     + ++.++ +|+  .+++++++++
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~-----~-~~~~~-~D~--~~~~~~~~~~   78 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS-----G-HRYVV-CDL--RKDLDLLFEK   78 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT-----C-SEEEE-CCT--TTCHHHHHHH
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh-----C-CeEEE-eeH--HHHHHHHHHH
Confidence            445578899999999999999999999999999999999987322    222     2 56677 999  5667776664


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +          .++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|++++ .|+||++||..+.   
T Consensus        79 ~----------~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~---  144 (249)
T 1o5i_A           79 V----------KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVI---  144 (249)
T ss_dssp             S----------CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT---
T ss_pred             h----------cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhc---
Confidence            3          36999999999763  345778999999999999999999999999998765 6899999999887   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                                       .+.++...|++||++++.++++++.|++   +.||+||+|+||+++|++.+............
T Consensus       145 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  204 (249)
T 1o5i_A          145 -----------------SPIENLYTSNSARMALTGFLKTLSFEVA---PYGITVNCVAPGWTETERVKELLSEEKKKQVE  204 (249)
T ss_dssp             -----------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTHHHHSCHHHHHHHH
T ss_pred             -----------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCCCccCcccccchhhHHHHHH
Confidence                             6677888999999999999999999998   78999999999999999875432211110112


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ...|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       205 ~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          205 SQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            2245677889999999999766432 3568999998888643

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.5e-37  Score=276.19  Aligned_cols=237  Identities=23%  Similarity=0.319  Sum_probs=197.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEE-EEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEA-FQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~-~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +|+++||||+||||++++++|+++|++|+++ +|+.++++++.+++...  +.++.. +.+|++|.++++++++++.+  
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~--   76 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAE--   76 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHH--
Confidence            4789999999999999999999999999998 89988888887777654  345666 89999999999999999988  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|++|||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|++++ .++||++||..+.        
T Consensus        77 ----~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~--------  143 (245)
T 2ph3_A           77 ----VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGI--------  143 (245)
T ss_dssp             ----HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH--------
T ss_pred             ----hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhc--------
Confidence                4578999999999863  335678999999999999999999999999998765 6899999999877        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++...|++||++++.++++++.|+.   +.+|++++++||++.|++.+..+.... .......+.
T Consensus       144 ------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~  207 (245)
T 2ph3_A          144 ------------LGNPGQANYVASKAGLIGFTRAVAKEYA---QRGITVNAVAPGFIETEMTERLPQEVK-EAYLKQIPA  207 (245)
T ss_dssp             ------------HCCSSBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSCHHHH-HHHHHTCTT
T ss_pred             ------------cCCCCCcchHHHHHHHHHHHHHHHHHHH---HcCeEEEEEEEEeecCcchhhcCHHHH-HHHHhcCCC
Confidence                        5556778999999999999999999997   789999999999999998765432211 111122345


Q ss_pred             hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          299 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      +++.+|+|+|+.+++++... ...+|+++..++|.
T Consensus       208 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          208 GRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            67889999999999765432 24579998888764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.8e-37  Score=279.92  Aligned_cols=236  Identities=19%  Similarity=0.262  Sum_probs=188.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCCh-HHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~i~~~~~~i~  137 (369)
                      ++++|+++||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+..++.++.++.+|++|+ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            367899999999999999999999999996 9999998753  3334454444456889999999998 99999999998


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+.      +.+++++.+++|+.+++.++++++|.|.+++  ..|+||++||.++.     
T Consensus        80 ~------~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~-----  142 (254)
T 1sby_A           80 D------QLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF-----  142 (254)
T ss_dssp             H------HHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-----
T ss_pred             H------hcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhc-----
Confidence            8      457899999999974      4578999999999999999999999997653  14899999999987     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTV  294 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~  294 (369)
                                     .+.++...|++||++++.++++++.++.   +.+|+|++|+||+|+|++.+....... ......
T Consensus       143 ---------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  204 (254)
T 1sby_A          143 ---------------NAIHQVPVYSASKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAE  204 (254)
T ss_dssp             ---------------SCCTTSHHHHHHHHHHHHHHHHHHHHHH---HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHH
T ss_pred             ---------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---cCCeEEEEEecCCccCccccccchhhhhhHHHHH
Confidence                           6677788999999999999999999986   679999999999999998765321100 000000


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      ......+.+|+|+|+.+++++.  ...+|+.|..++|...
T Consensus       205 ~~~~~~~~~~~dvA~~i~~~~~--~~~~G~~~~v~gG~~~  242 (254)
T 1sby_A          205 LLLSHPTQTSEQCGQNFVKAIE--ANKNGAIWKLDLGTLE  242 (254)
T ss_dssp             HHTTSCCEEHHHHHHHHHHHHH--HCCTTCEEEEETTEEE
T ss_pred             HHhcCCCCCHHHHHHHHHHHHH--cCCCCCEEEEeCCcee
Confidence            1111134589999999997663  4567999988888543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=6.2e-37  Score=307.35  Aligned_cols=228  Identities=24%  Similarity=0.272  Sum_probs=191.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc---------chHHHHHHHHHhhcCCCcEEEEEecCCChHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS---------HLLSETMADITSRNKDARLEAFQVDLSSFQSVL  130 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~---------~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~  130 (369)
                      +++||+++||||++|||+++|++|+++|++|++++|+.         +.++++.+++...+  .++   .+|++|.++++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g--~~~---~~d~~d~~~~~   79 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG--GVA---VADYNNVLDGD   79 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT--CEE---EEECCCTTCHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC--CeE---EEEcCCHHHHH
Confidence            47899999999999999999999999999999998765         67788888886653  232   36999988899


Q ss_pred             HHHHHHHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          131 KFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       131 ~~~~~i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                      ++++++.+      .+++||+||||||+.  .+..+++.++|+++++||+.|+++++++++|+|++++ .|+||++||.+
T Consensus        80 ~~v~~~~~------~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~a  152 (604)
T 2et6_A           80 KIVETAVK------NFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPA  152 (604)
T ss_dssp             HHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHH
T ss_pred             HHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHH
Confidence            99999988      568999999999986  3556889999999999999999999999999998765 69999999999


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  288 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~  288 (369)
                      +.                    .+.++...|++||+|+.+|+++|+.|++   +.||+||+|+|| +.|+|........ 
T Consensus       153 g~--------------------~~~~~~~~Y~asKaal~~lt~~la~El~---~~gIrVn~v~Pg-~~T~m~~~~~~~~-  207 (604)
T 2et6_A          153 GL--------------------YGNFGQANYASAKSALLGFAETLAKEGA---KYNIKANAIAPL-ARSRMTESIMPPP-  207 (604)
T ss_dssp             HH--------------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC-CCCHHHHTTSCHH-
T ss_pred             Hc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEccC-CcCccccccCChh-
Confidence            88                    6677889999999999999999999998   889999999998 6898865431110 


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  333 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~  333 (369)
                               .....+|+|+|..+++++......+|+.+..++|..
T Consensus       208 ---------~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~  243 (604)
T 2et6_A          208 ---------MLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFY  243 (604)
T ss_dssp             ---------HHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEE
T ss_pred             ---------hhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeE
Confidence                     113459999999999765544456899998888753

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.4e-36  Score=272.32  Aligned_cols=235  Identities=23%  Similarity=0.259  Sum_probs=191.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++      ..+.++.+|++|+++++++++     
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~-----   72 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG-----   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCCCEEEEeCCCHHHHHHHHH-----
Confidence            467999999999999999999999999999999999987776655443      134667999999999888765     


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.+.+.+++.+++|+.+++++++.++|.|++++..++||++||..+.       
T Consensus        73 -----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------  140 (244)
T 3d3w_A           73 -----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ-------  140 (244)
T ss_dssp             -----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhc-------
Confidence                 3578999999999863  34567889999999999999999999999999865324899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~  296 (369)
                                   .+.++...|++||++++.++++++.|++   +.+|++++|+||++.|++.+.. .............
T Consensus       141 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  204 (244)
T 3d3w_A          141 -------------RAVTNHSVYCSTKGALDMLTKVMALELG---PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI  204 (244)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC
T ss_pred             -------------cCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeccccccchhhhccChHHHHHHHhhC
Confidence                         5667788999999999999999999997   7899999999999999986532 1111111122223


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      |.+++.+|+|+|+.+++++... ...+|+.|..++|..
T Consensus       205 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          205 PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            5677889999999999766433 256899988888753

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-36  Score=276.48  Aligned_cols=237  Identities=24%  Similarity=0.327  Sum_probs=192.4

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++.++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+...++.++.+|++|++++++++++
T Consensus        25 ~~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  104 (279)
T 1xg5_A           25 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA  104 (279)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHH
Confidence            34456889999999999999999999999999999999999998888888887765456789999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC-CCeEEEEcCCccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTSFTHRNV  212 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-~g~IV~vsS~~~~~~  212 (369)
                      +.+      .++++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|++++. .++||++||..+...
T Consensus       105 ~~~------~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  178 (279)
T 1xg5_A          105 IRS------QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  178 (279)
T ss_dssp             HHH------HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHH------hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc
Confidence            988      4578999999999863  3456789999999999999999999999999987652 389999999887511


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMA  291 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~  291 (369)
                                        .+.++...|++||++++.++++++.|++. .+.+|++++|+||+|+|++.... ......  
T Consensus       179 ------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~--  237 (279)
T 1xg5_A          179 ------------------LPLSVTHFYSATKYAVTALTEGLRQELRE-AQTHIRATCISPGVVETQFAFKLHDKDPEK--  237 (279)
T ss_dssp             ------------------CSCGGGHHHHHHHHHHHHHHHHHHHHHHH-TTCCCEEEEEEESCBCSSHHHHHTTTCHHH--
T ss_pred             ------------------CCCCCCchhHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEEecCcccchhhhhhcccChhH--
Confidence                              34567789999999999999999999841 14789999999999999985321 111111  


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCCC
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      .....+..++.+|+|+|+.+++++..+.
T Consensus       238 ~~~~~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          238 AAATYEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred             HhhhcccccCCCHHHHHHHHHHHhcCCc
Confidence            1112233467899999999998776544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-36  Score=276.91  Aligned_cols=222  Identities=23%  Similarity=0.326  Sum_probs=191.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++.+|++|+++++++++++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999998888888887664  4578999999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|++++ .++||++||..+.     
T Consensus       104 ~------~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-----  171 (272)
T 1yb1_A          104 A------EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGH-----  171 (272)
T ss_dssp             H------HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-C-----
T ss_pred             H------HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhc-----
Confidence            8      5688999999999864  334567889999999999999999999999998765 6899999999887     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||++++.++++++.|+....+.+|+|++|+||+++|++.+..           .
T Consensus       172 ---------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-----------~  225 (272)
T 1yb1_A          172 ---------------VSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----------S  225 (272)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----------H
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-----------c
Confidence                           66678899999999999999999999842114689999999999999996531           1


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      .+++++.+|+|+|+.+++++..+.
T Consensus       226 ~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          226 TSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             ccccCCCCHHHHHHHHHHHHHcCC
Confidence            235678899999999998776543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=4.4e-37  Score=277.60  Aligned_cols=241  Identities=22%  Similarity=0.255  Sum_probs=199.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++||||+||||++++++|+++|++|++++|+ +++++++.+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999 88888888877654  45789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccc-c--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC----CCCeEEEEcCCcccc
Q 017580          139 WLLDSDMHSSIQLLINNAGI-L--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----VPSRIVNVTSFTHRN  211 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~-~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~----~~g~IV~vsS~~~~~  211 (369)
                            .++++|+||||||+ .  .+..+.+.+.+++++++|+.+++.+++.++|.|.+++    ..++||++||..+. 
T Consensus        82 ------~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-  154 (258)
T 3afn_B           82 ------KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGH-  154 (258)
T ss_dssp             ------HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHH-
T ss_pred             ------HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhc-
Confidence                  45789999999997 3  2345678899999999999999999999999987532    12799999998876 


Q ss_pred             cccccCCCcccccccccccC-CCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017580          212 VFNAQVNNETITGKFFLRSK-CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~  290 (369)
                                         . +.++...|++||++++.++++++.|++   +.+|++++++||++.|++.+...... ..
T Consensus       155 -------------------~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~  211 (258)
T 3afn_B          155 -------------------TGGGPGAGLYGAAKAFLHNVHKNWVDFHT---KDGVRFNIVSPGTVDTAFHADKTQDV-RD  211 (258)
T ss_dssp             -------------------HCCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSGGGTTCCHHH-HH
T ss_pred             -------------------cCCCCCchHHHHHHHHHHHHHHHHHHhhc---ccCeEEEEEeCCCcccccccccCHHH-HH
Confidence                               3 556778999999999999999999997   78999999999999999976542211 11


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGR  332 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~~--~~sG~~~~~~~g~  332 (369)
                      ......|++++.+|+|+|+.+++++....  ..+|+.|..++|.
T Consensus       212 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          212 RISNGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             HHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHhccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            11122355678899999999997654321  4579998888775

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=2.1e-36  Score=288.55  Aligned_cols=262  Identities=14%  Similarity=0.020  Sum_probs=210.0

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHCCCEEEEEeCCcch------------HHHHHHHHHhhcCCCcEEEEEecCCCh
Q 017580           61 IKRPVCIVTGATSGLGAA--AAYALSREGFHVVLVGRSSHL------------LSETMADITSRNKDARLEAFQVDLSSF  126 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~--~a~~La~~G~~Vvl~~r~~~~------------~~~~~~~~~~~~~~~~v~~~~~Dls~~  126 (369)
                      ..||+||||||++|||++  +++.|+++|++|++++|+.+.            .+.+.+.+.+.  +.++..+.+|++|+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCH
Confidence            468999999999999999  999999999999999997654            23333333333  56789999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCccEEEeccccc---------------cCC---------------------CCCCHHhH
Q 017580          127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---------------ATS---------------------SRLTPEGY  170 (369)
Q Consensus       127 ~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~---------------~~~---------------------~~~~~~~~  170 (369)
                      ++++++++++.+      .+++||+||||||..               .+.                     .+.+.++|
T Consensus       136 ~~v~~~v~~i~~------~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~  209 (418)
T 4eue_A          136 ETKDKVIKYIKD------EFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEI  209 (418)
T ss_dssp             HHHHHHHHHHHH------TTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHH
T ss_pred             HHHHHHHHHHHH------HcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHH
Confidence            999999999998      779999999999974               122                     24589999


Q ss_pred             HHhhhhhhHHHH-HHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchh--hhhhhhHHHHH
Q 017580          171 DQMMSTNYIGAF-FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCLL  247 (369)
Q Consensus       171 ~~~~~vN~~~~~-~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~SK~a~~  247 (369)
                      +.++++|..+.+ .+++.+.+.+...+ +|+||++||.++.                    .+.+.+  .+|++||+|+.
T Consensus       210 ~~~~~vn~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~--------------------~~~p~~~~~aY~ASKaAL~  268 (418)
T 4eue_A          210 EETRKVMGGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSP--------------------RTYKIYREGTIGIAKKDLE  268 (418)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCG--------------------GGTTTTTTSHHHHHHHHHH
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhc--------------------CCCCccccHHHHHHHHHHH
Confidence            999999999988 77777776543333 5899999999887                    556666  89999999999


Q ss_pred             HHHHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017580          248 IFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF  326 (369)
Q Consensus       248 ~~~~~la~el~~~~~-~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~  326 (369)
                      +++++|+.|++   + .||+||+|+||+|.|++....+..... ......++++..+||++++.+.+++.. ...+|.++
T Consensus       269 ~ltrsLA~ELa---~~~GIrVN~V~PG~v~T~~s~~ip~~p~y-~~~~~~~mk~~G~~E~v~e~~~~L~sd-~~~~g~~~  343 (418)
T 4eue_A          269 DKAKLINEKLN---RVIGGRAFVSVNKALVTKASAYIPTFPLY-AAILYKVMKEKNIHENCIMQIERMFSE-KIYSNEKI  343 (418)
T ss_dssp             HHHHHHHHHHH---HHHSCEEEEEECCCCCCHHHHTSTTHHHH-HHHHHHHHHHTTCCCCHHHHHHHHHHH-TTSSSSCC
T ss_pred             HHHHHHHHHhC---CccCeEEEEEECCcCcChhhhcCCCCcHH-HHHHHHHHhhcCChHHHHHHHHHHhhc-cccCCCcc
Confidence            99999999998   7 799999999999999998877643322 222334677888999999999976544 44568887


Q ss_pred             eCCCCccccCCcccCCHHHHHHHHHHHHHh
Q 017580          327 FGGKGRTVNSSALSFNSKLAGELWTTSCNL  356 (369)
Q Consensus       327 ~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~  356 (369)
                      ..|+|..+...+...+++.|+++-+.-+++
T Consensus       344 ~~D~~~~~r~d~~e~~~~~q~~~~~~~~~~  373 (418)
T 4eue_A          344 QFDDKGRLRMDDLELRKDVQDEVDRIWSNI  373 (418)
T ss_dssp             CCCTTSCEESCTTTTCHHHHHHHHHHHHHC
T ss_pred             ccCCCceeeCChhhcCHHHHHHHHHHHHHh
Confidence            778888888888888988886554444433

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.9e-36  Score=280.46  Aligned_cols=189  Identities=21%  Similarity=0.305  Sum_probs=160.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-----cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-----SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-----~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++|+++||||++|||+++|++|+++|++|++++|+     .++++++.+.+...  +.++.++.+|++|++++++++++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Confidence            568999999999999999999999999999988776     34555555555444  46799999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +.+      .++++|+||||||+.  .+..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++..  
T Consensus        81 ~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~--  151 (324)
T 3u9l_A           81 IIG------EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAG--  151 (324)
T ss_dssp             HHH------HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--
T ss_pred             HHH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhcc--
Confidence            998      558899999999986  3556789999999999999999999999999998776 69999999988761  


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  280 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~  280 (369)
                                       .+.+....|++||+|+++++++++.|++   +.||+|++|+||++.|++.
T Consensus       152 -----------------~~~~~~~~Y~asKaa~~~~~~~la~el~---~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          152 -----------------GTPPYLAPYFAAKAAMDAIAVQYARELS---RWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             -----------------CCCSSCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECCC-----
T ss_pred             -----------------CCCCcchhHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEECCccccCch
Confidence                             2345678899999999999999999998   8899999999999997764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1e-36  Score=296.09  Aligned_cols=239  Identities=19%  Similarity=0.212  Sum_probs=191.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+... +++.+...+.    .+.++.||++|.++++++++++.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV----GGTALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999997532 2222222222    356899999999999999999988


Q ss_pred             HHhccCCCCC-ccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          139 WLLDSDMHSS-IQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       139 ~~~~~~~~~~-id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                            .+++ +|+||||||+..  +..+.+.+.|++++++|+.|++++++++.|.|++++ .++||++||.++.     
T Consensus       284 ------~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~-----  351 (454)
T 3u0b_A          284 ------HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGI-----  351 (454)
T ss_dssp             ------HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHH-----
T ss_pred             ------HcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhC-----
Confidence                  4555 999999999874  345789999999999999999999999999998765 7899999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||+++++|+++++.|++   +.||+||+|+||+|+|+|.+..+..... .....
T Consensus       352 ---------------~g~~g~~~YaasKaal~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~  412 (454)
T 3u0b_A          352 ---------------AGNRGQTNYATTKAGMIGLAEALAPVLA---DKGITINAVAPGFIETKMTEAIPLATRE-VGRRL  412 (454)
T ss_dssp             ---------------HCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECSBCC----------CH-HHHHS
T ss_pred             ---------------CCCCCCHHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEcCcccChhhhhcchhhHH-HHHhh
Confidence                           6778889999999999999999999998   8899999999999999998765432211 11222


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      .++++..+|+|+|+.+++++... ...+|+.+.+++|..
T Consensus       413 ~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          413 NSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             BTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSBS
T ss_pred             ccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCccc
Confidence            35667789999999999765432 367899999988764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=4.7e-36  Score=267.28  Aligned_cols=220  Identities=25%  Similarity=0.307  Sum_probs=178.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+|+++||||+||||++++++|+++|++|++++|+.++++++.+++      .++.++.+|++|.++++++++++.+   
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~---   74 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEE---   74 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHH---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHH---
Confidence            4689999999999999999999999999999999988777665543      1678899999999999999999988   


Q ss_pred             ccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         .++++|++|||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|++++ .++||++||..+.         
T Consensus        75 ---~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~---------  141 (234)
T 2ehd_A           75 ---AFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGK---------  141 (234)
T ss_dssp             ---HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTT---------
T ss_pred             ---HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhc---------
Confidence               4578999999999863  345678999999999999999999999999998875 6899999999887         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  299 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  299 (369)
                                 .+.++...|++||++++.++++++.|++   +.||++++|+||+++|++....+..     .       
T Consensus       142 -----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~-----~-------  195 (234)
T 2ehd_A          142 -----------NPFKGGAAYNASKFGLLGLAGAAMLDLR---EANVRVVNVLPGSVDTGFAGNTPGQ-----A-------  195 (234)
T ss_dssp             -----------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEECC--------------------------
T ss_pred             -----------CCCCCCchhhHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeCCCcCCcccccccc-----c-------
Confidence                       6667788999999999999999999997   7899999999999999987643211     0       


Q ss_pred             CCCCHHHHHHHHHHHhcCCC-CCcccEEeCC
Q 017580          300 LLQSPEKGINSVLDAALAPP-ETSGVYFFGG  329 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~  329 (369)
                      ...+|+|+|+.+++++.... ..+|+....+
T Consensus       196 ~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~~  226 (234)
T 2ehd_A          196 WKLKPEDVAQAVLFALEMPGHAMVSEIELRP  226 (234)
T ss_dssp             --CCHHHHHHHHHHHHHSCCSSCCCEEECCC
T ss_pred             CCCCHHHHHHHHHHHhCCCcccccceEEEee
Confidence            13599999999998776543 4566665544

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=6e-36  Score=268.13  Aligned_cols=235  Identities=25%  Similarity=0.304  Sum_probs=190.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+++++..+++      ..+.++.+|++|+++++++++     
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~-----   72 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG-----   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCCcEEecCCCHHHHHHHHH-----
Confidence            467899999999999999999999999999999999987776655432      235667999999999888766     


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++|||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|.+++..++||++||..+.       
T Consensus        73 -----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-------  140 (244)
T 1cyd_A           73 -----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH-------  140 (244)
T ss_dssp             -----TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhc-------
Confidence                 3578999999999763  34567899999999999999999999999999765324899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~  296 (369)
                                   .+.++...|++||++++.++++++.|++   ..+|++++++||++.|++.+.. .............
T Consensus       141 -------------~~~~~~~~Y~~sK~a~~~~~~~~a~~~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  204 (244)
T 1cyd_A          141 -------------VTFPNLITYSSTKGAMTMLTKAMAMELG---PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH  204 (244)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS
T ss_pred             -------------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcccCccccccccCHHHHHHHHhcC
Confidence                         5667788999999999999999999997   7899999999999999986532 1111111122233


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                      +++++.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       205 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          205 PLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             CccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCcc
Confidence            5667889999999999766443 256799888887754

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-36  Score=272.97  Aligned_cols=241  Identities=23%  Similarity=0.270  Sum_probs=197.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++++|+++||||+||||++++++|+++|++|++++| +.+.++++.++++..  +.++.++.+|++|+++++++++++.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999 777777777777654  4578899999999999999999998


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|++|||||+..  +..+.+.+.+++.+++|+.++++++++++|.|++   +++||++||..+..    
T Consensus        95 ~------~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~----  161 (274)
T 1ja9_A           95 S------HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVM----  161 (274)
T ss_dssp             H------HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTC----
T ss_pred             H------HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCEEEEEcChHhcc----
Confidence            8      4578999999999863  3346789999999999999999999999999973   38999999987651    


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc------------c
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE------------V  283 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~------------~  283 (369)
                                     .+.++...|++||++++.++++++.|++   ..+|++++++||++.|++.+.            .
T Consensus       162 ---------------~~~~~~~~Y~~sK~a~~~~~~~~~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  223 (274)
T 1ja9_A          162 ---------------TGIPNHALYAGSKAAVEGFCRAFAVDCG---AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGM  223 (274)
T ss_dssp             ---------------CSCCSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTC
T ss_pred             ---------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcccccchhcccccccccccccC
Confidence                           2345677899999999999999999997   789999999999999998762            1


Q ss_pred             hhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          284 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      .............+.+++.+|+|+|+.+++++... ...+|+.|..++|.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          224 PQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             chHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            10111111122235667889999999999766543 24578888888764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-36  Score=268.81  Aligned_cols=230  Identities=23%  Similarity=0.300  Sum_probs=179.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++|+++||||++|||++++++|+++|  ++|++++|+.++++++.+.     .+.++.++.+|++++++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-----KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-----CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-----cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999  9999999998877654321     256789999999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC------CC----CCeEEEEc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS------PV----PSRIVNVT  205 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~------~~----~g~IV~vs  205 (369)
                      .++.    +++|+||||||+..   +..+.+.+.+++.+++|+.+++.++++++|.|+++      +.    .++||++|
T Consensus        76 ~~g~----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  151 (250)
T 1yo6_A           76 IVGS----DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             HHGG----GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             hcCC----CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEec
Confidence            4420    17999999999864   34567899999999999999999999999999764      21    48999999


Q ss_pred             CCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017580          206 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  285 (369)
Q Consensus       206 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~  285 (369)
                      |..+.......             ..+.++...|++||++++.++++++.|++   +.+|++++|+||+|+|++.+..  
T Consensus       152 S~~~~~~~~~~-------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~--  213 (250)
T 1yo6_A          152 SGLGSITDNTS-------------GSAQFPVLAYRMSKAAINMFGRTLAVDLK---DDNVLVVNFCPGWVQTNLGGKN--  213 (250)
T ss_dssp             CGGGCSTTCCS-------------TTSSSCBHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEEECCCC----------
T ss_pred             cCccccCCccc-------------ccccCCccHHHHHHHHHHHHHHHHHHHhc---cCCeEEEEEcCCceecCCCCCC--
Confidence            98876221000             01114667899999999999999999997   7899999999999999987531  


Q ss_pred             HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017580          286 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  331 (369)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g  331 (369)
                                    ...+|+|+|+.+++++.... ..+|.|+..+++
T Consensus       214 --------------~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  246 (250)
T 1yo6_A          214 --------------AALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             -------------------HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             --------------CCCCHHHHHHHHHHHHhcccccCCCeEEEECCc
Confidence                          24599999999998876654 468999887654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=4e-36  Score=302.62  Aligned_cols=256  Identities=18%  Similarity=0.198  Sum_probs=194.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC---------CcchHHHHHHHHHhhcCCCcEEEEEecCCChHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR---------SSHLLSETMADITSRNKDARLEAFQVDLSSFQS  128 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r---------~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~  128 (369)
                      ..+++||++|||||++|||+++|++|+++|++|++++|         +.+.++++.+++...+.  .   ..+|++|.++
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~--~---~~~D~~d~~~   88 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG--E---AVADYNSVID   88 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC--C---EEECCCCGGG
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC--e---EEEEeCCHHH
Confidence            34688999999999999999999999999999999988         77788888888876532  2   2489999999


Q ss_pred             HHHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          129 VLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       129 i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                      ++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||
T Consensus        89 ~~~~~~~~~~------~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS  161 (613)
T 3oml_A           89 GAKVIETAIK------AFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSS  161 (613)
T ss_dssp             HHHHHC----------------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECC
T ss_pred             HHHHHHHHHH------HCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECC
Confidence            9999999988      6789999999999873  445789999999999999999999999999999876 799999999


Q ss_pred             CcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017580          207 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  286 (369)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~  286 (369)
                      .++.                    .+.++...|++||+|+.+|+++|+.|++   +.||+||+|+||.+ |+|.......
T Consensus       162 ~a~~--------------------~~~~~~~~Y~asKaal~~lt~~la~e~~---~~gI~vn~v~Pg~~-t~~~~~~~~~  217 (613)
T 3oml_A          162 NSGI--------------------YGNFGQVNYTAAKMGLIGLANTVAIEGA---RNNVLCNVIVPTAA-SRMTEGILPD  217 (613)
T ss_dssp             HHHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC-------CCCCCH
T ss_pred             HHHc--------------------CCCCCChHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEECCCC-Chhhhhccch
Confidence            9988                    6677889999999999999999999998   88999999999975 6666543221


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc------------CC-cccCCHHHHHHHHHHH
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN------------SS-ALSFNSKLAGELWTTS  353 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~------------~~-~~~~d~~~~~~lw~~~  353 (369)
                      .          .....+|+|+|+.+++++......+|+++..++|....            +. ....+.+...+.|+.+
T Consensus       218 ~----------~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i  287 (613)
T 3oml_A          218 I----------LFNELKPKLIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNV  287 (613)
T ss_dssp             H----------HHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHH
T ss_pred             h----------hhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHh
Confidence            1          12456999999999965544435689998877765431            11 2235678888899988


Q ss_pred             HHhhhc
Q 017580          354 CNLFIN  359 (369)
Q Consensus       354 ~~~~~~  359 (369)
                      .++-..
T Consensus       288 ~~~~~~  293 (613)
T 3oml_A          288 TDMSKA  293 (613)
T ss_dssp             TCCTTC
T ss_pred             hccccC
Confidence            876553

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.4e-36  Score=280.36  Aligned_cols=243  Identities=13%  Similarity=0.130  Sum_probs=184.6

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCEEEEEeCCcch-----------HHHHHHHHHhhcCCCcEEEEEec----
Q 017580           60 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHL-----------LSETMADITSRNKDARLEAFQVD----  122 (369)
Q Consensus        60 ~~~~k~vlITGas--~gIG~~~a~~La~~G~~Vvl~~r~~~~-----------~~~~~~~~~~~~~~~~v~~~~~D----  122 (369)
                      +++||+++||||+  +|||+++|++|+++|++|++++|++..           ++++ +++...........+.+|    
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceecc
Confidence            4679999999999  999999999999999999999876321           1111 111100000113444443    


Q ss_pred             ----CC----C--------hHHHHHHHHHHHHHHhccCCCCCccEEEeccccc----cCCCCCCHHhHHHhhhhhhHHHH
Q 017580          123 ----LS----S--------FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAF  182 (369)
Q Consensus       123 ----ls----~--------~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~  182 (369)
                          ++    |        +++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~  157 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQ------DFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV  157 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHH------HHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHH------HcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHH
Confidence                22    2        6789999999988      457899999999974    34457899999999999999999


Q ss_pred             HHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchh-hhhhhhHHHHHHHHHHHHHHhCCCC
Q 017580          183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDK  261 (369)
Q Consensus       183 ~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~SK~a~~~~~~~la~el~~~~  261 (369)
                      +++++++|.|++   .|+||++||.++.                    .+.++. ..|++||+|+++|+++++.|++   
T Consensus       158 ~l~~~~~~~m~~---~g~iv~isS~~~~--------------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---  211 (297)
T 1d7o_A          158 SLLSHFLPIMNP---GGASISLTYIASE--------------------RIIPGYGGGMSSAKAALESDTRVLAFEAG---  211 (297)
T ss_dssp             HHHHHHGGGEEE---EEEEEEEECGGGT--------------------SCCTTCTTTHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHhcc---CceEEEEeccccc--------------------cCCCCcchHHHHHHHHHHHHHHHHHHHhC---
Confidence            999999999975   3899999999887                    555665 6899999999999999999996   


Q ss_pred             C-CCeEEEEecCCcccCCccccchhHHHH-HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          262 S-RHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       262 ~-~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      + .||+||+|+||+|+|++.+........ .......|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       212 ~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          212 RKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             HHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             cccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence            4 699999999999999997764211111 11122346678899999999999655332 35689999999887653

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=8.9e-37  Score=284.63  Aligned_cols=243  Identities=16%  Similarity=0.147  Sum_probs=157.6

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEeCCc-----------chHH-----------HHHHHHHhhcCC-C
Q 017580           60 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSS-----------HLLS-----------ETMADITSRNKD-A  114 (369)
Q Consensus        60 ~~~~k~vlITGa--s~gIG~~~a~~La~~G~~Vvl~~r~~-----------~~~~-----------~~~~~~~~~~~~-~  114 (369)
                      +++||++|||||  ++|||+++|++|+++|++|++++|++           ++++           ++.+++.+.+.. .
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            478999999999  89999999999999999999998753           2222           223333222110 0


Q ss_pred             cEEEEEec------------CCC--------hHHHHHHHHHHHHHHhccCCCCCccEEEeccccc----cCCCCCCHHhH
Q 017580          115 RLEAFQVD------------LSS--------FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGY  170 (369)
Q Consensus       115 ~v~~~~~D------------ls~--------~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~  170 (369)
                      ...++.+|            ++|        +++++++++++.+      .++++|+||||||+.    .+..+.+.++|
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~  159 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRA------DVGQIDILVHSLANGPEVTKPLLQTSRKGY  159 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHH------HHSCEEEEEEEEECCSSSSSCGGGCCHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHH------HcCCCCEEEECCccCCCCCCccccCCHHHH
Confidence            12344443            333        4589999999988      458899999999975    34457899999


Q ss_pred             HHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchh-hhhhhhHHHHHHH
Q 017580          171 DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIF  249 (369)
Q Consensus       171 ~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~SK~a~~~~  249 (369)
                      ++++++|+.|+++++++++|+|++   .|+||++||.++.                    .+.++. ..|++||+|+.+|
T Consensus       160 ~~~~~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~--------------------~~~~~~~~~Y~asKaal~~l  216 (319)
T 2ptg_A          160 LAAVSSSSYSFVSLLQHFLPLMKE---GGSALALSYIASE--------------------KVIPGYGGGMSSAKAALESD  216 (319)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEECC--------------------------------------THHH
T ss_pred             HHHHhHhhHHHHHHHHHHHHHHhc---CceEEEEeccccc--------------------cccCccchhhHHHHHHHHHH
Confidence            999999999999999999999975   3899999999887                    555666 6899999999999


Q ss_pred             HHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHH--HH-----HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CC
Q 017580          250 SYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFL--SL-----MAFTVLKLLGLLQSPEKGINSVLDAALAP-PE  320 (369)
Q Consensus       250 ~~~la~el~~~~~-~~i~v~~v~PG~v~T~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~  320 (369)
                      +++|+.|++   + .||+||+|+||+|+|+|.+......  ..     .......|++++.+|+|+|+.+++++... ..
T Consensus       217 ~~~la~el~---~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~  293 (319)
T 2ptg_A          217 CRTLAFEAG---RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARA  293 (319)
T ss_dssp             HHHHHHHHH---HHHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHhc---cccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            999999996   4 6999999999999999976542110  00     00112347778899999999999655432 36


Q ss_pred             CcccEEeCCCCccc
Q 017580          321 TSGVYFFGGKGRTV  334 (369)
Q Consensus       321 ~sG~~~~~~~g~~~  334 (369)
                      .+|+.+..++|...
T Consensus       294 itG~~i~vdGG~~~  307 (319)
T 2ptg_A          294 VTGATLYVDNGLHA  307 (319)
T ss_dssp             CCSCEEEESTTCTT
T ss_pred             ccCCEEEECCCcee
Confidence            78999999998754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.3e-36  Score=283.09  Aligned_cols=243  Identities=16%  Similarity=0.119  Sum_probs=184.3

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEeCCcch------HH-HHHHHHHhhcCCC---cEEEEEec-----
Q 017580           60 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHL------LS-ETMADITSRNKDA---RLEAFQVD-----  122 (369)
Q Consensus        60 ~~~~k~vlITGa--s~gIG~~~a~~La~~G~~Vvl~~r~~~~------~~-~~~~~~~~~~~~~---~v~~~~~D-----  122 (369)
                      +++||+++||||  ++|||+++|++|+++|++|++++|++..      .+ ...+++.+...+.   .+.++.+|     
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            478999999999  8999999999999999999999986410      00 0011111111111   12344443     


Q ss_pred             -------CC--------ChHHHHHHHHHHHHHHhccCCCCCccEEEeccccc----cCCCCCCHHhHHHhhhhhhHHHHH
Q 017580          123 -------LS--------SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFF  183 (369)
Q Consensus       123 -------ls--------~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~  183 (369)
                             ++        |+++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|+++
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  159 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQ------DLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS  159 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHH------HHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHH------hcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence                   33        36689999999988      458899999999975    344578999999999999999999


Q ss_pred             HHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchh-hhhhhhHHHHHHHHHHHHHHhCCCCC
Q 017580          184 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDKS  262 (369)
Q Consensus       184 l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~SK~a~~~~~~~la~el~~~~~  262 (369)
                      ++++++|.|++   .|+||++||.++.                    .+.++. ..|++||+|+.+|+++|+.|++   +
T Consensus       160 l~~~~~~~m~~---~g~Iv~isS~~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~el~---~  213 (315)
T 2o2s_A          160 LLQHFGPIMNE---GGSAVTLSYLAAE--------------------RVVPGYGGGMSSAKAALESDTRTLAWEAG---Q  213 (315)
T ss_dssp             HHHHHSTTEEE---EEEEEEEEEGGGT--------------------SCCTTCCTTHHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHhc---CCEEEEEeccccc--------------------ccCCCccHHHHHHHHHHHHHHHHHHHHhC---c
Confidence            99999999975   3899999999887                    555665 5899999999999999999996   4


Q ss_pred             -CCeEEEEecCCcccCCccccchh-----H-HHH-HHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017580          263 -RHVSVIAADPGVVKTNIMREVPS-----F-LSL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  333 (369)
Q Consensus       263 -~~i~v~~v~PG~v~T~~~~~~~~-----~-~~~-~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~  333 (369)
                       .||+||+|+||+|+|++.+....     . ... .......|++++.+|+|+|+.+++++... ...+|+++..++|..
T Consensus       214 ~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          214 KYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             HTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence             79999999999999998654321     1 111 11122346778899999999999655421 356899999999876


Q ss_pred             c
Q 017580          334 V  334 (369)
Q Consensus       334 ~  334 (369)
                      .
T Consensus       294 ~  294 (315)
T 2o2s_A          294 A  294 (315)
T ss_dssp             G
T ss_pred             e
Confidence            5

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=3.4e-36  Score=271.19  Aligned_cols=222  Identities=13%  Similarity=0.057  Sum_probs=185.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+..+|+++||||++|||+++|++|+++|++|++++|+.++.+              -..+.+|++|.++++++++++.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~   83 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINS   83 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHH
Confidence            3455899999999999999999999999999999999976422              13578999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccccC---CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                            .++++|+||||||+...   ..+.+.+++++++++|+.|++.++++++|.|++   .|+||++||..+.     
T Consensus        84 ------~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~-----  149 (251)
T 3orf_A           84 ------KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAAL-----  149 (251)
T ss_dssp             ------TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG-----
T ss_pred             ------HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhc-----
Confidence                  77999999999998643   456788999999999999999999999999976   3799999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||+|++.++++++.|++. .+.+|+|++|+||+|+|++.+.....         
T Consensus       150 ---------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~~~gi~v~~v~PG~v~t~~~~~~~~~---------  204 (251)
T 3orf_A          150 ---------------NRTSGMIAYGATKAATHHIIKDLASENGG-LPAGSTSLGILPVTLDTPTNRKYMSD---------  204 (251)
T ss_dssp             ---------------SCCTTBHHHHHHHHHHHHHHHHHTSTTSS-SCTTCEEEEEEESCBCCHHHHHHCTT---------
T ss_pred             ---------------cCCCCCchhHHHHHHHHHHHHHHHHHhcc-cCCCcEEEEEecCcCcCcchhhhccc---------
Confidence                           77788899999999999999999999631 15899999999999999987543221         


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcC-C-CCCcccEEeCCCCcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALA-P-PETSGVYFFGGKGRT  333 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~-~-~~~sG~~~~~~~g~~  333 (369)
                      .+.+++.+|+|+|+.+++++.. . ...+|+.+....|..
T Consensus       205 ~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          205 ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             ccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence            1345678999999999987765 2 356898887665543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-35  Score=268.60  Aligned_cols=231  Identities=20%  Similarity=0.245  Sum_probs=188.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCC---CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G---~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      ..++++|+++||||++|||+++|++|+++|   ++|++++|+.++.+.+ +++.+.  +.++.++.+|+++.++++++++
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~   92 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKLVA   92 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHHHH
Confidence            346789999999999999999999999999   9999999998776654 444443  4578999999999999999999


Q ss_pred             HHHHHHhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC------CC----CCeE
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS------PV----PSRI  201 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~------~~----~g~I  201 (369)
                      ++.+.++.    .++|+||||||+..   +..+.+.+++++.+++|+.+++.+++.++|.|+++      +.    .++|
T Consensus        93 ~~~~~~g~----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  168 (267)
T 1sny_A           93 DIEGVTKD----QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAI  168 (267)
T ss_dssp             HHHHHHGG----GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEE
T ss_pred             HHHHhcCC----CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceE
Confidence            99884421    17999999999864   33567899999999999999999999999999865      11    4899


Q ss_pred             EEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017580          202 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR  281 (369)
Q Consensus       202 V~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~  281 (369)
                      |++||..+....                 .+.++...|++||++++.++++++.|++   +.+|++++|+||+|+|++..
T Consensus       169 v~isS~~~~~~~-----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~  228 (267)
T 1sny_A          169 INMSSILGSIQG-----------------NTDGGMYAYRTSKSALNAATKSLSVDLY---PQRIMCVSLHPGWVKTDMGG  228 (267)
T ss_dssp             EEECCGGGCSTT-----------------CCSCCCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEECCCSBCSTTTC
T ss_pred             EEEecccccccC-----------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---cCCcEEEEeCCcceecCCCC
Confidence            999998876210                 1123567899999999999999999997   78999999999999999975


Q ss_pred             cchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017580          282 EVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  331 (369)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g  331 (369)
                      ..                ...+|+++|+.+++++.... ..+|.++..+++
T Consensus       229 ~~----------------~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  263 (267)
T 1sny_A          229 SS----------------APLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT  263 (267)
T ss_dssp             TT----------------CSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSC
T ss_pred             CC----------------CCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCc
Confidence            31                35699999999998876544 568998876544

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=3.6e-36  Score=281.22  Aligned_cols=232  Identities=22%  Similarity=0.249  Sum_probs=179.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhh----cCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +|+|+||||++|||+++|++|+++|++|++++|+...+++..+.+...    ..+.++.++.+|++|+++++++++++. 
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~-   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh-
Confidence            689999999999999999999999999999888766554444443321    224578999999999999999988763 


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                             ++++|+||||||+.  .+..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus        81 -------~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~------  146 (327)
T 1jtv_A           81 -------EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGL------  146 (327)
T ss_dssp             -------TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT------
T ss_pred             -------cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc------
Confidence                   37899999999986  3445778999999999999999999999999998665 6899999999987      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH---------
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL---------  287 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~---------  287 (369)
                                    .+.+....|++||++++.|+++++.|++   +.||+|++|+||+|+|+|.+......         
T Consensus       147 --------------~~~~~~~~Y~aSK~a~~~~~~~la~el~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  209 (327)
T 1jtv_A          147 --------------MGLPFNDVYCASKFALEGLCESLAVLLL---PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDI  209 (327)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCC-------CCHHHHHHTSCH
T ss_pred             --------------cCCCCChHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeCcccChHHhhhhhcchhhhccCCH
Confidence                          6667788999999999999999999998   78999999999999999976531100         


Q ss_pred             ---HHH-HHH--HHHHhhCC-CCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          288 ---SLM-AFT--VLKLLGLL-QSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       288 ---~~~-~~~--~~~~~~~~-~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                         ... ...  ...+++++ .+|+|+|+.+++++..+. ....|+.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~-~~~~~~t  255 (327)
T 1jtv_A          210 HTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK-PTLRYFT  255 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS-CCSEEES
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCC-CCeEEEe
Confidence               000 000  01233343 599999999998765432 2345554

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=2e-36  Score=271.06  Aligned_cols=223  Identities=13%  Similarity=0.033  Sum_probs=182.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .++|+++||||++|||+++|++|+++|++|++++|++++.+            ....++.+|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999976432            245778999999999999999998843


Q ss_pred             hccCCCCCccEEEecccccc--CC-CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                      +    .+++|+||||||+..  +. .+.+.+.+++.+++|+.+++.++++++|.|++   .|+||++||.++.       
T Consensus        73 ~----~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~-------  138 (241)
T 1dhr_A           73 G----DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAAL-------  138 (241)
T ss_dssp             T----TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG-------
T ss_pred             C----CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHc-------
Confidence            1    168999999999863  33 56778999999999999999999999999965   3899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||++++.++++++.|++. .+.||+||+|+||+++|++.+......         .
T Consensus       139 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~-~~~gi~v~~v~PG~v~T~~~~~~~~~~---------~  195 (241)
T 1dhr_A          139 -------------DGTPGMIGYGMAKGAVHQLCQSLAGKNSG-MPSGAAAIAVLPVTLDTPMNRKSMPEA---------D  195 (241)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHTSTTSS-CCTTCEEEEEEESCEECHHHHHHSTTS---------C
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCeEEEEEecCcccCccccccCcch---------h
Confidence                         66778899999999999999999999841 147899999999999999865421110         0


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~  332 (369)
                      ..+..+|+|+|+.+++++.... ..+|+++..+++.
T Consensus       196 ~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          196 FSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             hccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence            1234689999999997764432 5689998776554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=2.7e-35  Score=270.41  Aligned_cols=218  Identities=22%  Similarity=0.265  Sum_probs=185.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||+||||+++|++|+++|++|++++|++++++++.+++.+.+ ..++.++.+|++|.++++++++++.+ 
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~-  102 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGK-  102 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHH-
Confidence            4789999999999999999999999999999999999999888888876653 34789999999999999999999988 


Q ss_pred             HhccCCCCCccEEEec-ccccc-CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINN-AGILA-TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~n-AG~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|++||| ||+.. +..+.+.+++++++++|+.|++.++++++|.|+++.  |+||++||.++.       
T Consensus       103 -----~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~-------  168 (286)
T 1xu9_A          103 -----LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGK-------  168 (286)
T ss_dssp             -----HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGT-------
T ss_pred             -----HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC--CEEEEECCcccc-------
Confidence                 45789999999 57653 334568899999999999999999999999997653  899999999887       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHh--CCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL--GLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el--~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                   .+.++...|++||++++.++++++.|+  .   ..+|++++|+||+++|++.......         
T Consensus       169 -------------~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~---~~~i~v~~v~Pg~v~t~~~~~~~~~---------  223 (286)
T 1xu9_A          169 -------------VAYPMVAAYSASKFALDGFFSSIRKEYSVS---RVNVSITLCVLGLIDTETAMKAVSG---------  223 (286)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHH---TCCCEEEEEEECCBCCHHHHHHSCG---------
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEEeecCccCChhHHHhccc---------
Confidence                         667788899999999999999999998  4   6799999999999999986431110         


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      .......+|+++|+.+++++..+
T Consensus       224 ~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          224 IVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             cccCCCCCHHHHHHHHHHHHhcC
Confidence            00123569999999999876544

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-36  Score=268.11  Aligned_cols=223  Identities=14%  Similarity=0.039  Sum_probs=183.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++|+++||||++|||+++|++|+++|++|++++|++++.+            ....++.+|++|+++++++++++.+.++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999976532            2457788999999999999999988431


Q ss_pred             ccCCCCCccEEEecccccc--CC-CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          142 DSDMHSSIQLLINNAGILA--TS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~--~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .+++|+||||||+..  +. .+.+.+.+++.+++|+.+++.+++.++|.|++   .|+||++||.++.        
T Consensus        70 ----~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~--------  134 (236)
T 1ooe_A           70 ----GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAM--------  134 (236)
T ss_dssp             ----TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG--------
T ss_pred             ----CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhc--------
Confidence                168999999999863  33 46678999999999999999999999999965   3799999999987        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++...|++||++++.++++++.|++. .+.||+|++|+||+++|++.+......         ..
T Consensus       135 ------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~---------~~  192 (236)
T 1ooe_A          135 ------------GPTPSMIGYGMAKAAVHHLTSSLAAKDSG-LPDNSAVLTIMPVTLDTPMNRKWMPNA---------DH  192 (236)
T ss_dssp             ------------SCCTTBHHHHHHHHHHHHHHHHHHSTTSS-CCTTCEEEEEEESCBCCHHHHHHSTTC---------CG
T ss_pred             ------------cCCCCcHHHHHHHHHHHHHHHHHHHHhcc-cCCCeEEEEEecCcccCcchhhcCCCc---------cc
Confidence                        67788899999999999999999999841 157899999999999999865421110         11


Q ss_pred             hCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCcc
Q 017580          299 GLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRT  333 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~~~g~~  333 (369)
                      .+..+|+|+|+.+++.+..+  ...+|+++..++|..
T Consensus       193 ~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          193 SSWTPLSFISEHLLKWTTETSSRPSSGALLKITTENG  229 (236)
T ss_dssp             GGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             cccCCHHHHHHHHHHHHcCCCcccccccEEEEecCCC
Confidence            24568999999998655443  256799987776643

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-35  Score=263.21  Aligned_cols=227  Identities=21%  Similarity=0.259  Sum_probs=186.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+++||||++|||++++++|+++|++|++++|+.+ .             .++.++.+|++|+++++++++++ +    
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~----   62 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-Q----   62 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-H----
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-H----
Confidence            689999999999999999999999999999999865 1             23578999999999999999998 5    


Q ss_pred             cCCCCCccEEEeccccccC--CCCC----CHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-----CCCeEEEEcCCcccc
Q 017580          143 SDMHSSIQLLINNAGILAT--SSRL----TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNVTSFTHRN  211 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~--~~~~----~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~~g~IV~vsS~~~~~  211 (369)
                        .++++|++|||||+...  ..+.    +.+++++.+++|+.+++.+++.++|.|++++     ..++||++||..+. 
T Consensus        63 --~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-  139 (242)
T 1uay_A           63 --EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF-  139 (242)
T ss_dssp             --HHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH-
T ss_pred             --hhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc-
Confidence              35789999999998632  2233    3459999999999999999999999998753     12599999999887 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  291 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~  291 (369)
                                         .+.++...|++||++++.++++++.|++   +.||++++|+||++.|++......... ..
T Consensus       140 -------------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~  196 (242)
T 1uay_A          140 -------------------EGQIGQAAYAASKGGVVALTLPAARELA---GWGIRVVTVAPGLFDTPLLQGLPEKAK-AS  196 (242)
T ss_dssp             -------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSCSSHHHHTSCHHHH-HH
T ss_pred             -------------------cCCCCCchhhHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeccCcchhhhccchhHH-HH
Confidence                               5567788999999999999999999997   789999999999999999766433211 11


Q ss_pred             HHHHHHh-hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          292 FTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 ~~~~~~~-~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      .....|+ +++.+|+|+|+.+++++.. +..+|+.+..++|..+.
T Consensus       197 ~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          197 LAAQVPFPPRLGRPEEYAALVLHILEN-PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHTTCCSSCSCCCHHHHHHHHHHHHHC-TTCCSCEEEESTTCCCC
T ss_pred             HHhhCCCcccCCCHHHHHHHHHHHhcC-CCCCCcEEEEcCCeecC
Confidence            1112344 6788999999999987665 66789999888887653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.3e-36  Score=271.26  Aligned_cols=214  Identities=19%  Similarity=0.201  Sum_probs=152.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||++|||+++|++|++ |++|++++|++++++++.+       ..++.++.+|+++.++ .+.+.+..+ 
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~-   71 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLK-   71 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGT-
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHH-
Confidence            36789999999999999999999998 9999999999877665543       2358899999998766 333333333 


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           .++++|+||||||+..  +..+.+.+++++++++|+.+++++++.++|.|++++  |+||++||.++.       
T Consensus        72 -----~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~-------  137 (245)
T 3e9n_A           72 -----NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGN-------  137 (245)
T ss_dssp             -----TCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC------------
T ss_pred             -----hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccc-------
Confidence                 5689999999999873  345678899999999999999999999999998764  899999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++...|++||+|++.++++++.|++   +.||+|++|+||+|+|++.+.......     ...+
T Consensus       138 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-----~~~~  196 (245)
T 3e9n_A          138 -------------GPHPGNTIYAASKHALRGLADAFRKEEA---NNGIRVSTVSPGPTNTPMLQGLMDSQG-----TNFR  196 (245)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCC---------------------C
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCCccCchhhhhhhhhh-----cccc
Confidence                         6778889999999999999999999998   789999999999999999876533221     1123


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC
Q 017580          298 LGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      .+++.+|+|+|+++++++..+
T Consensus       197 ~~~~~~p~dvA~~i~~l~~~~  217 (245)
T 3e9n_A          197 PEIYIEPKEIANAIRFVIDAG  217 (245)
T ss_dssp             CGGGSCHHHHHHHHHHHHTSC
T ss_pred             cccCCCHHHHHHHHHHHHcCC
Confidence            456789999999999766443

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.2e-35  Score=266.23  Aligned_cols=235  Identities=26%  Similarity=0.382  Sum_probs=186.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-CCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~-~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++|+++||||++|||+++|++|++ +|++|++++|+.++.++..+++...  +.++.++.+|++|.++++++++++.+  
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~--   78 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRK--   78 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHH--
Confidence            579999999999999999999999 9999999999998888888888665  45788999999999999999999988  


Q ss_pred             hccCCCCCccEEEeccccccCC-CCCC-HHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc---
Q 017580          141 LDSDMHSSIQLLINNAGILATS-SRLT-PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA---  215 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~-~~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~---  215 (369)
                          .++++|+||||||+.... .+.+ .+.+++++++|+.|++++++.++|.|++   .|+||++||..+......   
T Consensus        79 ----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~  151 (276)
T 1wma_A           79 ----EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSP  151 (276)
T ss_dssp             ----HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCH
T ss_pred             ----hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCCh
Confidence                457899999999986432 2333 5889999999999999999999999875   379999999877632100   


Q ss_pred             ---------cCCCcccccc---------c-ccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCC----CCeEEEEecC
Q 017580          216 ---------QVNNETITGK---------F-FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS----RHVSVIAADP  272 (369)
Q Consensus       216 ---------~~~~~~~~~~---------~-~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~----~~i~v~~v~P  272 (369)
                               .+..++....         . .....+.+ ...|++||++++.+++.++++++   +    .+|+|++|+|
T Consensus       152 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~---~~~~~~~i~v~~v~P  227 (276)
T 1wma_A          152 ELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLS---EQRKGDKILLNACCP  227 (276)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHH---HHCTTSCCEEEEEEC
T ss_pred             hHHhhccccccchhhhhhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhh---cccCCCceEEEEecC
Confidence                     0000000000         0 00001122 27899999999999999999996   4    6999999999


Q ss_pred             CcccCCccccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEe
Q 017580          273 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFF  327 (369)
Q Consensus       273 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~  327 (369)
                      |+|+|++.+.                .++.+|+|+|+.+++++..++   ..+|+++.
T Consensus       228 G~v~t~~~~~----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          228 GWVRTDMAGP----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             CSBCSTTTCT----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             CccccCcCCc----------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            9999999764                146799999999998876542   56899987

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=3.8e-35  Score=265.04  Aligned_cols=237  Identities=16%  Similarity=0.150  Sum_probs=169.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||++|||+++|++|+++|++|++++|++++++.              . +.+|+++.++++++++++       
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~-------   59 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKC-------   59 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTC-------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHh-------
Confidence            689999999999999999999999999999998764321              1 678999999988877631       


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc-c
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET-I  222 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~-~  222 (369)
                        .+++|+||||||+..+.     +.+++++++|+.++++++++++|.|++++ .|+||++||.++............ .
T Consensus        60 --~~~id~lv~~Ag~~~~~-----~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~  131 (257)
T 1fjh_A           60 --SKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             --TTCCSEEEECCCCCTTC-----SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             --CCCCCEEEECCCCCCCc-----ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhh
Confidence              27899999999986421     33899999999999999999999998775 689999999987732111000000 0


Q ss_pred             ccccc-------cccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHH
Q 017580          223 TGKFF-------LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTV  294 (369)
Q Consensus       223 ~~~~~-------~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~  294 (369)
                      .....       ....+.++...|++||++++.++++++.|++   +.+|+|++|+||+|+|++.+.. .... ......
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~  207 (257)
T 1fjh_A          132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG---EAGVRLNTIAPGATETPLLQAGLQDPR-YGESIA  207 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH---HTTCEEEEEEECC---------------------
T ss_pred             cccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEeeCCCCCccchhhccchh-HHHHHH
Confidence            00000       0003445788999999999999999999997   7899999999999999997654 2111 001111


Q ss_pred             --HHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017580          295 --LKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  334 (369)
Q Consensus       295 --~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~  334 (369)
                        ..|++++.+|+|+|+.+++++.... ..+|+++..++|...
T Consensus       208 ~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          208 KFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             -CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             hcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence              2355678999999999997654322 568999998888654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.97  E-value=6.2e-32  Score=291.38  Aligned_cols=236  Identities=19%  Similarity=0.158  Sum_probs=186.2

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSG-LGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas~g-IG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++||++|||||++| ||+++|++|+++|++|+++ +|+.++++++.+++.+..+  +.++.++.+|++|.+++++++++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            578999999999998 9999999999999999998 6888888887777754432  45789999999999999999999


Q ss_pred             HHHHHhccCC-----CC-CccEEEecccccc---CCCCCC--HHhHHHhhhhhhHHHHHHHHHH--hHhhhcCCCCCeEE
Q 017580          136 LQQWLLDSDM-----HS-SIQLLINNAGILA---TSSRLT--PEGYDQMMSTNYIGAFFLTKLL--LPLLKNSPVPSRIV  202 (369)
Q Consensus       136 i~~~~~~~~~-----~~-~id~lv~nAG~~~---~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--~~~~~~~~~~g~IV  202 (369)
                      +.+      .     ++ ++|+||||||+..   +..+.+  .+.|+++|++|+.+++.+++.+  +|.|++++ .|+||
T Consensus       752 i~~------~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-~G~IV  824 (1887)
T 2uv8_A          752 IYD------TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVIL  824 (1887)
T ss_dssp             HHS------CTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-EEEEE
T ss_pred             HHH------hccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-CCEEE
Confidence            887      5     55 8999999999863   345677  8999999999999999999998  78887765 68999


Q ss_pred             EEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHH-HHHHHHHhCCCCCCCeEEEEecCCccc-CCcc
Q 017580          203 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIF-SYELHRNLGLDKSRHVSVIAADPGVVK-TNIM  280 (369)
Q Consensus       203 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~-~~~la~el~~~~~~~i~v~~v~PG~v~-T~~~  280 (369)
                      ++||.++.                    .+  +...|++||+|+.+| ++.++.+++   +. |+||+|+||+|+ |+|.
T Consensus       825 nISS~ag~--------------------~g--g~~aYaASKAAL~~Lttr~lA~ela---~~-IrVNaV~PG~V~tT~m~  878 (1887)
T 2uv8_A          825 PMSPNHGT--------------------FG--GDGMYSESKLSLETLFNRWHSESWA---NQ-LTVCGAIIGWTRGTGLM  878 (1887)
T ss_dssp             EECSCTTC--------------------SS--CBTTHHHHHHHGGGHHHHHHHSSCT---TT-EEEEEEEECCEECC---
T ss_pred             EEcChHhc--------------------cC--CCchHHHHHHHHHHHHHHHHHHHhC---CC-eEEEEEEeccccccccc
Confidence            99999877                    33  456899999999999 999999986   55 999999999999 8987


Q ss_pred             ccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCC----CcccEEeC--CCCccc
Q 017580          281 REVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE----TSGVYFFG--GKGRTV  334 (369)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~----~sG~~~~~--~~g~~~  334 (369)
                      .........   ....++ +..+|+|+|+.++  ++.++.    .+|+.+..  ++|...
T Consensus       879 ~~~~~~~~~---~~~~pl-r~~sPEEVA~avl--fLaSd~~as~iTGq~I~VDVDGG~~~  932 (1887)
T 2uv8_A          879 SANNIIAEG---IEKMGV-RTFSQKEMAFNLL--GLLTPEVVELCQKSPVMADLNGGLQF  932 (1887)
T ss_dssp             --CCTTHHH---HHTTSC-CCEEHHHHHHHHH--GGGSHHHHHHHHHSCEEEEESCSTTT
T ss_pred             ccchhHHHH---HHhcCC-CCCCHHHHHHHHH--HHhCCCccccccCcEEEEECCCCeec
Confidence            542111111   111222 4569999999999  444443    36777765  366544

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.5e-32  Score=287.08  Aligned_cols=236  Identities=18%  Similarity=0.150  Sum_probs=187.3

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSG-LGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas~g-IG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++||++|||||++| ||+++|++|+++|++|+++ +|+.++++++.+++.+..+  +.++.++.+|++|.+++++++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            578999999999998 9999999999999999998 6887777777777754332  45789999999999999999999


Q ss_pred             HHHHHhccCC-----CC-CccEEEecccccc---CCCCCC--HHhHHHhhhhhhHHHHHHHHHH--hHhhhcCCCCCeEE
Q 017580          136 LQQWLLDSDM-----HS-SIQLLINNAGILA---TSSRLT--PEGYDQMMSTNYIGAFFLTKLL--LPLLKNSPVPSRIV  202 (369)
Q Consensus       136 i~~~~~~~~~-----~~-~id~lv~nAG~~~---~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--~~~~~~~~~~g~IV  202 (369)
                      +.+      .     ++ ++|+||||||+..   +..+.+  .+.|++++++|+.+++.+++.+  +|.|++++ .|+||
T Consensus       553 I~e------~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-gGrIV  625 (1688)
T 2pff_A          553 IYD------TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVIL  625 (1688)
T ss_dssp             HHS------CTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-EEECC
T ss_pred             HHH------hccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-CCEEE
Confidence            987      5     56 8999999999863   445667  8999999999999999999999  88887765 58999


Q ss_pred             EEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHH-HHHHHHHhCCCCCCCeEEEEecCCccc-CCcc
Q 017580          203 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIF-SYELHRNLGLDKSRHVSVIAADPGVVK-TNIM  280 (369)
Q Consensus       203 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~-~~~la~el~~~~~~~i~v~~v~PG~v~-T~~~  280 (369)
                      ++||.++.                    .+  +...|++||+|+.+| ++.++.+++   +. |+||+|+||+|+ |+|.
T Consensus       626 nISSiAG~--------------------~G--g~saYaASKAAL~aLttrsLAeEla---~~-IRVNaVaPG~V~TT~M~  679 (1688)
T 2pff_A          626 PMSPNHGT--------------------FG--GDGMYSESKLSLETLFNRWHSESWA---NQ-LTVCGAIIGWTRGTGLM  679 (1688)
T ss_dssp             CCCSCTTT--------------------SS--CBTTHHHHHHHHTHHHHHTTTSSCT---TT-EECCCCCCCCCCCCSSS
T ss_pred             EEEChHhc--------------------cC--CchHHHHHHHHHHHHHHHHHHHHcC---CC-eEEEEEEECcCcCCccc
Confidence            99999877                    33  456899999999999 788888886   44 999999999999 7886


Q ss_pred             ccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCC----CcccEEeCC--CCccc
Q 017580          281 REVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE----TSGVYFFGG--KGRTV  334 (369)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~----~sG~~~~~~--~g~~~  334 (369)
                      .........   ....++ +..+|+|+|+.++++  .++.    .+|+.+..+  +|...
T Consensus       680 ~~~e~~~~~---l~~ipl-R~~sPEEVA~aIlFL--aSd~sAs~ITGq~I~VDVDGG~~~  733 (1688)
T 2pff_A          680 SANNIIAEG---IEKMGV-RTFSQKEMAFNLLGL--LTPEVVELCQKSPVMADLNGGLQF  733 (1688)
T ss_dssp             CTTTTCSTT---TSSSSC-CCCCCCTTHHHHHHH--TSTTHHHHHTTSCCCCCCSCSGGG
T ss_pred             CCchHHHHH---HHhCCC-CCCCHHHHHHHHHHH--hCCCccccccCcEEEEEcCCCeee
Confidence            531110000   000122 455999999999954  4443    368877654  66544

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=7.3e-31  Score=228.29  Aligned_cols=195  Identities=17%  Similarity=0.189  Sum_probs=163.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+||||++++++|+ +|++|++++|+.+                   .+.+|++++++++++++++        
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~--------   56 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV--------   56 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH--------
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh--------
Confidence            79999999999999999999 9999999999864                   4789999999999887753        


Q ss_pred             CCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          145 MHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                        +++|++|||||...  +..+.+.+.+++.+++|+.+++.+++.+.|.|++   .++||++||..+.            
T Consensus        57 --~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~------------  119 (202)
T 3d7l_A           57 --GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMME------------  119 (202)
T ss_dssp             --CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGT------------
T ss_pred             --CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhc------------
Confidence              57999999999763  3446788999999999999999999999999864   3799999998877            


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCC
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ  302 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  302 (369)
                              .+.++...|++||++++.++++++.|+    +.+|++++++||++.|++.+...          ..+..++.
T Consensus       120 --------~~~~~~~~Y~~sK~~~~~~~~~~~~e~----~~gi~v~~v~pg~v~~~~~~~~~----------~~~~~~~~  177 (202)
T 3d7l_A          120 --------DPIVQGASAAMANGAVTAFAKSAAIEM----PRGIRINTVSPNVLEESWDKLEP----------FFEGFLPV  177 (202)
T ss_dssp             --------SCCTTCHHHHHHHHHHHHHHHHHTTSC----STTCEEEEEEECCBGGGHHHHGG----------GSTTCCCB
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHHHc----cCCeEEEEEecCccCCchhhhhh----------hccccCCC
Confidence                    666778899999999999999999887    36899999999999999753110          11234578


Q ss_pred             CHHHHHHHHHHHhcCCCCCcccEEeC
Q 017580          303 SPEKGINSVLDAALAPPETSGVYFFG  328 (369)
Q Consensus       303 ~~~e~A~~v~~~~l~~~~~sG~~~~~  328 (369)
                      +|+|+|+.++.++  ....+|+.|..
T Consensus       178 ~~~dva~~~~~~~--~~~~~G~~~~v  201 (202)
T 3d7l_A          178 PAAKVARAFEKSV--FGAQTGESYQV  201 (202)
T ss_dssp             CHHHHHHHHHHHH--HSCCCSCEEEE
T ss_pred             CHHHHHHHHHHhh--hccccCceEec
Confidence            9999999998665  34556776653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=1.2e-31  Score=241.26  Aligned_cols=239  Identities=19%  Similarity=0.144  Sum_probs=175.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||+||||++++++|+++|++|++++|+.++.+.               .+.+|+++.++++++++++       
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~-------   59 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRC-------   59 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHH-------
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHc-------
Confidence            589999999999999999999999999999998764311               1678999999998887743       


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc-
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI-  222 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~-  222 (369)
                        .+++|+||||||+..+     .+.+++.+++|+.+++.++++++|.|++++ .++||++||..+...........+. 
T Consensus        60 --~~~~d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~  131 (255)
T 2dkn_A           60 --GGVLDGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAM  131 (255)
T ss_dssp             --TTCCSEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHH
T ss_pred             --CCCccEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhh
Confidence              2579999999998642     234889999999999999999999998765 6899999998877321110000000 


Q ss_pred             -----ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH-
Q 017580          223 -----TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK-  296 (369)
Q Consensus       223 -----~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-  296 (369)
                           ...........++...|+.||++++.+++.++++++   +.+|++++++||++.|++.+............... 
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~  208 (255)
T 2dkn_A          132 LAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA---GRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFV  208 (255)
T ss_dssp             HHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH---HTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCC
T ss_pred             cccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHH
Confidence                 000000000124678999999999999999999987   67999999999999999875431110000111111 


Q ss_pred             -HhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017580          297 -LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  335 (369)
Q Consensus       297 -~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~~  335 (369)
                       +.+++.+|+|+|+++++++.... ..+|++|..++|....
T Consensus       209 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          209 APLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence             45578899999999997765432 4679999888887654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=1.2e-30  Score=227.64  Aligned_cols=197  Identities=21%  Similarity=0.257  Sum_probs=162.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||+||||++++++|+++  +|++++|++++++++.+++.     .  .++.+|++|++++++++++        
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-----~--~~~~~D~~~~~~~~~~~~~--------   63 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-----A--RALPADLADELEAKALLEE--------   63 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-----C--EECCCCTTSHHHHHHHHHH--------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-----C--cEEEeeCCCHHHHHHHHHh--------
Confidence            57999999999999999999999  99999999888777766652     1  7889999999999988876        


Q ss_pred             CCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          144 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                        ++++|++|||||+..  +..+.+.+++++.+++|+.+++.+++++    ++++ .++||++||..+.           
T Consensus        64 --~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~sS~~~~-----------  125 (207)
T 2yut_A           64 --AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-GARAVFFGAYPRY-----------  125 (207)
T ss_dssp             --HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-EEEEEEECCCHHH-----------
T ss_pred             --cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-CcEEEEEcChhhc-----------
Confidence              167999999999863  3446788999999999999999999998    2222 4899999999887           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                               .+.++...|++||++++.++++++.|++   +.+|++++++||++.|++.....           .+.+++
T Consensus       126 ---------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~gi~v~~v~pg~v~t~~~~~~~-----------~~~~~~  182 (207)
T 2yut_A          126 ---------VQVPGFAAYAAAKGALEAYLEAARKELL---REGVHLVLVRLPAVATGLWAPLG-----------GPPKGA  182 (207)
T ss_dssp             ---------HSSTTBHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEECCCCBCSGGGGGGT-----------SCCTTC
T ss_pred             ---------cCCCCcchHHHHHHHHHHHHHHHHHHHh---hhCCEEEEEecCcccCCCccccC-----------CCCCCC
Confidence                     5667788999999999999999999997   78999999999999999853321           123467


Q ss_pred             CCHHHHHHHHHHHhcCC
Q 017580          302 QSPEKGINSVLDAALAP  318 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~~  318 (369)
                      .+|+|+|+.+++++..+
T Consensus       183 ~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          183 LSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             BCHHHHHHHHHHHHC--
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            89999999999766443

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=2.2e-30  Score=278.82  Aligned_cols=238  Identities=17%  Similarity=0.137  Sum_probs=185.7

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHCCCEEEEEe-CCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSG-LGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas~g-IG~~~a~~La~~G~~Vvl~~-r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++||+||||||++| ||+++|++|+++|++|++++ |+.+++++..+++.+..  .+.++.++.||++|.+++++++++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            478999999999999 99999999999999999985 77777777766664432  246799999999999999999999


Q ss_pred             HHHHHhccCC---CC-CccEEEecccccc---CCCCCC--HHhHHHhhhhhhHHHHHHHHH--HhHhhhcCCCCCeEEEE
Q 017580          136 LQQWLLDSDM---HS-SIQLLINNAGILA---TSSRLT--PEGYDQMMSTNYIGAFFLTKL--LLPLLKNSPVPSRIVNV  204 (369)
Q Consensus       136 i~~~~~~~~~---~~-~id~lv~nAG~~~---~~~~~~--~~~~~~~~~vN~~~~~~l~~~--~~~~~~~~~~~g~IV~v  204 (369)
                      +.+      .   ++ +||+||||||+..   +..+.+  .+.|+++|++|+.+++.+++.  ++|.|.+++ .|+||++
T Consensus       729 i~~------~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnI  801 (1878)
T 2uv9_A          729 IYD------TKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPL  801 (1878)
T ss_dssp             HHC------SSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEE
T ss_pred             HHH------hhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEE
Confidence            886      5   67 8999999999863   446777  899999999999999999987  778887664 5899999


Q ss_pred             cCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHH-hCCCCCCCeEEEEecCCccc-CCcccc
Q 017580          205 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN-LGLDKSRHVSVIAADPGVVK-TNIMRE  282 (369)
Q Consensus       205 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e-l~~~~~~~i~v~~v~PG~v~-T~~~~~  282 (369)
                      ||.++.                    .+  +...|++||+++++|++.++.+ ++   +. |+||+|+||+++ |+|...
T Consensus       802 SS~ag~--------------------~g--g~~aYaASKAAL~aLt~~laAeEla---~~-IrVNaVaPG~V~gT~m~~~  855 (1878)
T 2uv9_A          802 SPNHGT--------------------FG--NDGLYSESKLALETLFNRWYSESWG---NY-LTICGAVIGWTRGTGLMSA  855 (1878)
T ss_dssp             CSCSSS--------------------SS--CCSSHHHHHHHHTTHHHHHHHSTTT---TT-EEEEEEEECCBCCTTSCSH
T ss_pred             cchhhc--------------------cC--CchHHHHHHHHHHHHHHHHHHHHcC---CC-eEEEEEEecceecCccccc
Confidence            999887                    33  3568999999999999876654 65   44 999999999999 999754


Q ss_pred             chhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC--CCCcccEEeC--CCCccc
Q 017580          283 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFG--GKGRTV  334 (369)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~--~~g~~~  334 (369)
                      ....   .......++ +..+|+|+|+.+++++...  ...+|+.+..  ++|...
T Consensus       856 ~~~~---~~~~~~~pl-r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          856 NNLV---AEGVEKLGV-RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             HHHT---HHHHHTTTC-CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred             chhh---HHHHHhcCC-CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccc
Confidence            2110   111111222 4559999999999654322  1346777654  466543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=5.7e-30  Score=252.82  Aligned_cols=216  Identities=14%  Similarity=0.097  Sum_probs=174.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEE-eCC-------------cchHHHHHHHHHhhcCCCcEEEEEecCCCh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLV-GRS-------------SHLLSETMADITSRNKDARLEAFQVDLSSF  126 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~-~r~-------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~  126 (369)
                      .++++|||||++|||+++|++|+++|++ |+++ +|+             .+.++++.+++.+.  +.++.++.||++|.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCH
Confidence            5899999999999999999999999996 8888 998             35567777777665  56899999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEE
Q 017580          127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV  204 (369)
Q Consensus       127 ~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~v  204 (369)
                      ++++++++++.       .+++||+||||||+..  +..+.+.+.+++++++|+.|++++.+.+.|.+++++..++||++
T Consensus       328 ~~v~~~~~~i~-------~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~  400 (525)
T 3qp9_A          328 EAAARLLAGVS-------DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLF  400 (525)
T ss_dssp             HHHHHHHHTSC-------TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEE
T ss_pred             HHHHHHHHHHH-------hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEE
Confidence            99999998775       3589999999999874  45678999999999999999999999999999776435899999


Q ss_pred             cCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017580          205 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  284 (369)
Q Consensus       205 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~  284 (369)
                      ||.++.                    .+.++...|++||++++.|+    .+++   ..||++++|+||+++|+|.....
T Consensus       401 SS~a~~--------------------~g~~g~~~YaaaKa~l~~lA----~~~~---~~gi~v~sI~pG~~~tgm~~~~~  453 (525)
T 3qp9_A          401 SSVAAI--------------------WGGAGQGAYAAGTAFLDALA----GQHR---ADGPTVTSVAWSPWEGSRVTEGA  453 (525)
T ss_dssp             EEGGGT--------------------TCCTTCHHHHHHHHHHHHHH----TSCC---SSCCEEEEEEECCBTTSGGGSSH
T ss_pred             CCHHHc--------------------CCCCCCHHHHHHHHHHHHHH----HHHH---hCCCCEEEEECCccccccccchh
Confidence            999998                    77888999999999998874    4555   78999999999999999985422


Q ss_pred             hHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC
Q 017580          285 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      ....    .. .......+|+++++.+.+++...
T Consensus       454 ~~~~----~~-~~g~~~l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          454 TGER----LR-RLGLRPLAPATALTALDTALGHG  482 (525)
T ss_dssp             HHHH----HH-HTTBCCBCHHHHHHHHHHHHHHT
T ss_pred             hHHH----HH-hcCCCCCCHHHHHHHHHHHHhCC
Confidence            1111    11 11113579999999999776543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=2.7e-28  Score=238.33  Aligned_cols=212  Identities=19%  Similarity=0.177  Sum_probs=168.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc---chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..+++.+++.+.  +.++.++.||++|.++++++++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999 899999974   4466777777665  57899999999999999999998765


Q ss_pred             HHhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                            . +++|+||||||+.   .+..+.+.+.+++++++|+.|++++.+.+.+.+     .++||++||.++.     
T Consensus       317 ------~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-----~~~iV~~SS~a~~-----  379 (496)
T 3mje_A          317 ------D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-----LDAFVLFSSGAAV-----  379 (496)
T ss_dssp             ------T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-----CSEEEEEEEHHHH-----
T ss_pred             ------h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-----CCEEEEEeChHhc-----
Confidence                  4 7899999999986   345678999999999999999999999876652     4799999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.++...|++||++++.|++.++       ..||++++|+||.+.|.............   ..
T Consensus       380 ---------------~g~~g~~~YaAaKa~ldala~~~~-------~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l---~~  434 (496)
T 3mje_A          380 ---------------WGSGGQPGYAAANAYLDALAEHRR-------SLGLTASSVAWGTWGEVGMATDPEVHDRL---VR  434 (496)
T ss_dssp             ---------------TTCTTCHHHHHHHHHHHHHHHHHH-------HTTCCCEEEEECEESSSCC------CHHH---HH
T ss_pred             ---------------CCCCCcHHHHHHHHHHHHHHHHHH-------hcCCeEEEEECCcccCCccccChHHHHHH---Hh
Confidence                           777889999999999998887654       46899999999998765433211111111   11


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      ..+ ...+|+++++.+.+++...+
T Consensus       435 ~g~-~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          435 QGV-LAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             TTE-EEECHHHHHHHHHHHHHHTC
T ss_pred             cCC-CCCCHHHHHHHHHHHHcCCC
Confidence            111 23599999999987665443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=3.4e-27  Score=243.46  Aligned_cols=212  Identities=24%  Similarity=0.221  Sum_probs=170.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHH-HCCC-EEEEEeCC---cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALS-REGF-HVVLVGRS---SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La-~~G~-~Vvl~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+++++||||++|||+++|++|+ ++|+ +|++++|+   .+.+++..+++++.  +.++.++.||++|.++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            47999999999999999999999 7999 69999999   45677777787665  678999999999999999999987


Q ss_pred             HHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      .+ +||+||||||+..  +..+++.++|++.+++|+.|++++.+++.|.|       +||++||.++.    
T Consensus       607 ~~------~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~----  668 (795)
T 3slk_A          607 PD------EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGV----  668 (795)
T ss_dssp             CT------TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHH----
T ss_pred             HH------hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhc----
Confidence            65      44 8999999999974  45578999999999999999999999997776       89999999998    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.++...|++||+    |+++|+++++   ..||++|+|+||++.|++........ ......
T Consensus       669 ----------------~g~~g~~~YaAaka----~~~alA~~~~---~~Gi~v~sI~pG~v~t~g~~~~~~~~-~~~~~~  724 (795)
T 3slk_A          669 ----------------LGSGGQGNYAAANS----FLDALAQQRQ---SRGLPTRSLAWGPWAEHGMASTLREA-EQDRLA  724 (795)
T ss_dssp             ----------------HTCSSCHHHHHHHH----HHHHHHHHHH---HTTCCEEEEEECCCSCCCHHHHHHHH-HHHHHH
T ss_pred             ----------------CCCCCCHHHHHHHH----HHHHHHHHHH---HcCCeEEEEECCeECcchhhccccHH-HHHHHH
Confidence                            77888999999996    5566666665   78999999999999987643321111 111111


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      ...+ ...+++++...+..++...
T Consensus       725 ~~g~-~~l~~~e~~~~~~~~l~~~  747 (795)
T 3slk_A          725 RSGL-LPISTEEGLSQFDAACGGA  747 (795)
T ss_dssp             HTTB-CCCCHHHHHHHHHHHHTSS
T ss_pred             hcCC-CCCCHHHHHHHHHHHHhCC
Confidence            1122 3468899988888655443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.94  E-value=7.7e-27  Score=263.13  Aligned_cols=225  Identities=16%  Similarity=0.092  Sum_probs=166.5

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHCCCEEEEEeCCcch-----HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHH
Q 017580           60 GIKRPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHL-----LSETMADITSRNKDARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        60 ~~~~k~vlITGas~g-IG~~~a~~La~~G~~Vvl~~r~~~~-----~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~  133 (369)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...  +.++..+.+|++|.+++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHH
Confidence            378999999999999 9999999999999999999999876     55555555333  457899999999999999999


Q ss_pred             HHHHHHHhccCCCCCccEEEeccccc-------cCCCCCCHHhHHHh----hhhhhHHHHHHHHHHhHhhhcCCCC---C
Q 017580          134 DSLQQWLLDSDMHSSIQLLINNAGIL-------ATSSRLTPEGYDQM----MSTNYIGAFFLTKLLLPLLKNSPVP---S  199 (369)
Q Consensus       134 ~~i~~~~~~~~~~~~id~lv~nAG~~-------~~~~~~~~~~~~~~----~~vN~~~~~~l~~~~~~~~~~~~~~---g  199 (369)
                      +++.+...+  .+|++|+||||||+.       ....+.+.++|++.    +++|+.+++.+++.+.|.|..++..   +
T Consensus      2211 ~~i~~~~~~--~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ 2288 (3089)
T 3zen_D         2211 EWVGTEQTE--SLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLH 2288 (3089)
T ss_dssp             HHHTSCCEE--EESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred             HHHHhhhhh--hcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeE
Confidence            988751100  358999999999982       12223344555544    9999999999999999999876521   1


Q ss_pred             eEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHH--hCCCCCCCeEEEEecCCccc-
Q 017580          200 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN--LGLDKSRHVSVIAADPGVVK-  276 (369)
Q Consensus       200 ~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e--l~~~~~~~i~v~~v~PG~v~-  276 (369)
                      .|+++|+..+.                      .++..+|++||+|+.+|+++++.|  ++    ++|+||+++||+|+ 
T Consensus      2289 ii~~~ss~~g~----------------------~g~~~aYsASKaAl~~LtrslA~E~~~a----~~IrVn~v~PG~v~t 2342 (3089)
T 3zen_D         2289 VVLPGSPNRGM----------------------FGGDGAYGEAKSALDALENRWSAEKSWA----ERVSLAHALIGWTKG 2342 (3089)
T ss_dssp             EEEEECSSTTS----------------------CSSCSSHHHHGGGHHHHHHHHHHCSTTT----TTEEEEEEECCCEEC
T ss_pred             EEEECCccccc----------------------CCCchHHHHHHHHHHHHHHHHHhccccC----CCeEEEEEeecccCC
Confidence            23333433222                      234458999999999999999999  64    57999999999998 


Q ss_pred             CCccccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCC
Q 017580          277 TNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE  320 (369)
Q Consensus       277 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~  320 (369)
                      |++..........   ....+. +..+|+|+|..++  +|+++.
T Consensus      2343 T~l~~~~~~~~~~---~~~~~~-r~~~PeEIA~avl--fLaS~~ 2380 (3089)
T 3zen_D         2343 TGLMGQNDAIVSA---VEEAGV-TTYTTDEMAAMLL--DLCTVE 2380 (3089)
T ss_dssp             STTTTTTTTTHHH---HGGGSC-BCEEHHHHHHHHH--HTTSHH
T ss_pred             CcccccchhHHHH---HHhcCC-CCCCHHHHHHHHH--HHhChh
Confidence            7776442211111   111122 3449999999999  666653

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=4.3e-26  Score=206.96  Aligned_cols=206  Identities=16%  Similarity=0.057  Sum_probs=157.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++|+|+||||+||||++++++|+++|++|++++|++.+.+           ..++.++.+|++|.++++++++       
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA-------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence            4689999999999999999999999999999999975432           3578999999999998877655       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                            ++|+||||||+.      +.+.+++.+++|+.|++++++++.+.    + .++||++||..++.......    
T Consensus        64 ------~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~~----~-~~~iv~~SS~~~~g~~~~~~----  122 (267)
T 3rft_A           64 ------GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARAH----G-QPRIVFASSNHTIGYYPQTE----  122 (267)
T ss_dssp             ------TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGTTSBTTS----
T ss_pred             ------CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcchHHhCCCCCCC----
Confidence                  389999999983      34568899999999999999998432    2 57999999988763221111    


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                          ...+..+.++...|+.||++.+.+++.++.++      ++++++|+||.|.+++......             ..+
T Consensus       123 ----~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~------g~~~~~vr~~~v~~~~~~~~~~-------------~~~  179 (267)
T 3rft_A          123 ----RLGPDVPARPDGLYGVSKCFGENLARMYFDKF------GQETALVRIGSCTPEPNNYRML-------------STW  179 (267)
T ss_dssp             ----CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECBCSSSCCSTTHH-------------HHB
T ss_pred             ----CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCeEEEEEeecccCCCCCCCce-------------eeE
Confidence                01112455667899999999999999999876      4778888999888876543111             124


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017580          302 QSPEKGINSVLDAALAPPETSGVYFFGG  329 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~~~~~sG~~~~~~  329 (369)
                      .+++|+++.+..++...+...+.++...
T Consensus       180 ~~~~d~a~~~~~~~~~~~~~~~~~~~~s  207 (267)
T 3rft_A          180 FSHDDFVSLIEAVFRAPVLGCPVVWGAS  207 (267)
T ss_dssp             CCHHHHHHHHHHHHHCSCCCSCEEEECC
T ss_pred             EcHHHHHHHHHHHHhCCCCCceEEEEeC
Confidence            6899999999876655544334444433

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=4.5e-25  Score=217.04  Aligned_cols=207  Identities=15%  Similarity=0.176  Sum_probs=167.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcc---hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH---LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++++||||+||||++++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.||++|.+++++++++  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc--
Confidence            478999999999999999999999999 7999999874   456666777654  56899999999999999888764  


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                               +++|+||||||+..  +..+.+.+.+++.+++|+.|++++.+.+.+..   + .++||++||.++.     
T Consensus       334 ---------~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~-~~~~V~~SS~a~~-----  395 (511)
T 2z5l_A          334 ---------YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---G-LDAFVLFSSVTGT-----  395 (511)
T ss_dssp             ---------SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---T-CCCEEEEEEGGGT-----
T ss_pred             ---------CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---C-CCEEEEEeCHHhc-----
Confidence                     57999999999874  33567899999999999999999998765431   2 4799999999887     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchhHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~  294 (369)
                                     .+.++...|++||++++.+++.++       ..|+++++|+||++ +|+|.......  ..   .
T Consensus       396 ---------------~g~~g~~~YaaaKa~ld~la~~~~-------~~gi~v~sv~pG~~~~tgm~~~~~~~--~~---~  448 (511)
T 2z5l_A          396 ---------------WGNAGQGAYAAANAALDALAERRR-------AAGLPATSVAWGLWGGGGMAAGAGEE--SL---S  448 (511)
T ss_dssp             ---------------TCCTTBHHHHHHHHHHHHHHHHHH-------TTTCCCEEEEECCBCSTTCCCCHHHH--HH---H
T ss_pred             ---------------CCCCCCHHHHHHHHHHHHHHHHHH-------HcCCcEEEEECCcccCCcccccccHH--HH---H
Confidence                           667788999999999999988653       56899999999999 78887653211  11   1


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                       .......+|+++++.+..++...
T Consensus       449 -~~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          449 -RRGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             -HHTBCCBCHHHHHHHHHHHHHHT
T ss_pred             -hcCCCCCCHHHHHHHHHHHHhCC
Confidence             11124679999999999876543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=8.2e-26  Score=221.41  Aligned_cols=210  Identities=21%  Similarity=0.193  Sum_probs=164.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcc---hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH---LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++++||||+||||++++++|+++|+ +|++++|+.+   ..+++.+++...  +.++.++.||++|.+++.++++++ 
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            478999999999999999999999999 5999999875   456666667654  568999999999999999999887 


Q ss_pred             HHHhccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      .++++|++|||||+...  ..+.+.+.+++.+++|+.|++++.+.+.+.    + .++||++||.++.     
T Consensus       302 ~------~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~-~~~~V~~SS~a~~-----  365 (486)
T 2fr1_A          302 G------DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL----D-LTAFVLFSSFASA-----  365 (486)
T ss_dssp             C------TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS----C-CSEEEEEEEHHHH-----
T ss_pred             H------hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC----C-CCEEEEEcChHhc-----
Confidence            3      45899999999998743  346789999999999999999999987542    2 5899999999887     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccchhHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVPSFLSLMAFTV  294 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~  294 (369)
                                     .+.++...|+++|++++.|++.++       ..|+++++|+||.+.|+ |......  .   ...
T Consensus       366 ---------------~g~~g~~~Yaaaka~l~~la~~~~-------~~gi~v~~i~pG~~~~~gm~~~~~~--~---~~~  418 (486)
T 2fr1_A          366 ---------------FGAPGLGGYAPGNAYLDGLAQQRR-------SDGLPATAVAWGTWAGSGMAEGPVA--D---RFR  418 (486)
T ss_dssp             ---------------TCCTTCTTTHHHHHHHHHHHHHHH-------HTTCCCEEEEECCBC-----------------CT
T ss_pred             ---------------CCCCCCHHHHHHHHHHHHHHHHHH-------hcCCeEEEEECCeeCCCcccchhHH--H---HHH
Confidence                           666778899999999998876554       45899999999999876 5432110  0   000


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                       .......+++++++.+..++...
T Consensus       419 -~~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          419 -RHGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             -TTTEECBCHHHHHHHHHHHHHTT
T ss_pred             -hcCCCCCCHHHHHHHHHHHHhCC
Confidence             00013569999999999876544

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.92  E-value=2.9e-25  Score=197.57  Aligned_cols=208  Identities=14%  Similarity=0.036  Sum_probs=150.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcE-EEEEecCCChHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARL-EAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v-~~~~~Dls~~~~i~~~~~~  135 (369)
                      ...+++|++++||||+|+||++++++|+++|++|++++|++++++++.+        .++ .++.+|++  +++      
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~--~~~------   78 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE--EDF------   78 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT--SCC------
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH--HHH------
Confidence            4457889999999999999999999999999999999999887665432        257 88999998  222      


Q ss_pred             HHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                       .+      ..+++|+||||||...      .+.+++.+++|+.++..+++++...    + .++||++||..+....  
T Consensus        79 -~~------~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~~~~~~--  138 (236)
T 3e8x_A           79 -SH------AFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEKR----G-IKRFIMVSSVGTVDPD--  138 (236)
T ss_dssp             -GG------GGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHHH----T-CCEEEEECCTTCSCGG--
T ss_pred             -HH------HHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHHc----C-CCEEEEEecCCCCCCC--
Confidence             22      3357999999999753      2567899999999999999988443    2 4799999996655110  


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     ...++...|+.||++++.+++          ..++++++++||++.|+..........     ..
T Consensus       139 ---------------~~~~~~~~Y~~sK~~~e~~~~----------~~gi~~~~lrpg~v~~~~~~~~~~~~~-----~~  188 (236)
T 3e8x_A          139 ---------------QGPMNMRHYLVAKRLADDELK----------RSSLDYTIVRPGPLSNEESTGKVTVSP-----HF  188 (236)
T ss_dssp             ---------------GSCGGGHHHHHHHHHHHHHHH----------HSSSEEEEEEECSEECSCCCSEEEEES-----SC
T ss_pred             ---------------CChhhhhhHHHHHHHHHHHHH----------HCCCCEEEEeCCcccCCCCCCeEEecc-----CC
Confidence                           011567899999999988765          257999999999999987543211000     00


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  331 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g  331 (369)
                      .....+.+++|+|+.+++++..+ ...|+.|..++|
T Consensus       189 ~~~~~~i~~~Dva~~~~~~~~~~-~~~g~~~~v~~~  223 (236)
T 3e8x_A          189 SEITRSITRHDVAKVIAELVDQQ-HTIGKTFEVLNG  223 (236)
T ss_dssp             SCCCCCEEHHHHHHHHHHHTTCG-GGTTEEEEEEEC
T ss_pred             CcccCcEeHHHHHHHHHHHhcCc-cccCCeEEEeCC
Confidence            00135678999999999765443 356777766555

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.91  E-value=5.2e-23  Score=191.03  Aligned_cols=252  Identities=9%  Similarity=-0.026  Sum_probs=183.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHH-HCCCEEEEEeCCcch------------HHHHHHHHHhhcCCCcEEEEEecCCChH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALS-REGFHVVLVGRSSHL------------LSETMADITSRNKDARLEAFQVDLSSFQ  127 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La-~~G~~Vvl~~r~~~~------------~~~~~~~~~~~~~~~~v~~~~~Dls~~~  127 (369)
                      ..+|+|||||||+|||++++..|| +.|++++++++..+.            ...+.+++++.  +.+...+.||++|.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSDE  125 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCHH
Confidence            457999999999999999999999 689999999886542            23344555555  568899999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCccEEEeccccccC---------------C---------------------CCCCHHhHH
Q 017580          128 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---------------S---------------------SRLTPEGYD  171 (369)
Q Consensus       128 ~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~---------------~---------------------~~~~~~~~~  171 (369)
                      +++++++++++      .+|+||+||||++....               .                     ...+.++++
T Consensus       126 ~i~~vi~~i~~------~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie  199 (401)
T 4ggo_A          126 IKAQVIEEAKK------KGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAA  199 (401)
T ss_dssp             HHHHHHHHHHH------TTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHH
T ss_pred             HHHHHHHHHHH------hcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHH
Confidence            99999999999      78999999999996410               0                     012344444


Q ss_pred             H---hhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchh--hhhhhhHHHH
Q 017580          172 Q---MMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCL  246 (369)
Q Consensus       172 ~---~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~SK~a~  246 (369)
                      .   .|....++.+...+...+.|.+   ++++|.+|+..+.                    ..+|.+  ..++.+|++|
T Consensus       200 ~T~~vMg~s~~s~w~~al~~a~lla~---G~siva~SYiGse--------------------~t~P~Y~~G~mG~AKaaL  256 (401)
T 4ggo_A          200 ATVKVMGGEDWERWIKQLSKEGLLEE---GCITLAYSYIGPE--------------------ATQALYRKGTIGKAKEHL  256 (401)
T ss_dssp             HHHHHHSSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCG--------------------GGHHHHTTSHHHHHHHHH
T ss_pred             HHHHHHhhhHHHHHHHHHHhhhcccC---CceEEEEeccCcc--------------------eeecCCCccHHHHHHHHH
Confidence            4   4455667777777777787755   5899999998876                    344443  4789999999


Q ss_pred             HHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017580          247 LIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF  326 (369)
Q Consensus       247 ~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~  326 (369)
                      +..++.|+.+++     ++++++++||.+.|.....+|.......... ..++...+.|.+.+.+.++|...-...+.-.
T Consensus       257 Ea~~r~La~eL~-----~~~a~v~v~~a~vT~AssaIP~~ply~~~l~-kvmk~~g~heg~ieq~~rl~~~~ly~~~~~~  330 (401)
T 4ggo_A          257 EATAHRLNKENP-----SIRAFVSVNKGLVTRASAVIPVIPLYLASLF-KVMKEKGNHEGCIEQITRLYAERLYRKDGTI  330 (401)
T ss_dssp             HHHHHHHHHHCT-----TEEEEEEECCCCCCTTGGGSSSHHHHHHHHH-HHHHHHTCCCCHHHHHHHHHHHTTSCTTCCC
T ss_pred             HHHHHHHHHhcC-----CCcEEEEEcCccccchhhcCCCchHHHHHHH-HHHHhcCCCCchHHHHHHHHHHhhccCCCCC
Confidence            999999999985     4899999999999999988876554433222 2344445788888988888765432221112


Q ss_pred             eCCCCccccCCcccCCHHHHHHH
Q 017580          327 FGGKGRTVNSSALSFNSKLAGEL  349 (369)
Q Consensus       327 ~~~~g~~~~~~~~~~d~~~~~~l  349 (369)
                      -.|+...+...+...+++.|.++
T Consensus       331 ~~D~~~r~r~d~~el~~~vq~~v  353 (401)
T 4ggo_A          331 PVDEENRIRIDDWELEEDVQKAV  353 (401)
T ss_dssp             CCCTTSCEESCTTTTCHHHHHHH
T ss_pred             CcCCCCCccCchhhcCHHHHHHH
Confidence            22333445555666677766443

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.91  E-value=4.1e-23  Score=193.80  Aligned_cols=243  Identities=13%  Similarity=0.042  Sum_probs=167.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ++|+||||+|+||++++++|+++|++|++++|+. .......+.+..   ..++.++.+|++|.+++.++++.       
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~-------   71 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITK-------   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHH-------
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhc-------
Confidence            4799999999999999999999999999999864 333333344433   23688999999999998887764       


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc-CCCc-
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ-VNNE-  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~-~~~~-  220 (369)
                          .++|+||||||....  +.+.+.++..+++|+.++..+++++.+.+.    .++||++||.+.+...... ...+ 
T Consensus        72 ----~~~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~e~~  141 (347)
T 1orr_A           72 ----YMPDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETE  141 (347)
T ss_dssp             ----HCCSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             ----cCCCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCccccc
Confidence                249999999997421  223456788999999999999999988753    2699999998765321110 0000 


Q ss_pred             -cc----ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---hHHHHHH-
Q 017580          221 -TI----TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---SFLSLMA-  291 (369)
Q Consensus       221 -~~----~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~---~~~~~~~-  291 (369)
                       .+    ......+..+.++...|+.||++.+.+++.++.++      ++++++++||.+.++......   ....... 
T Consensus       142 ~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~  215 (347)
T 1orr_A          142 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF------GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQK  215 (347)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTCCCBTTBCHHHHHHHH
T ss_pred             ccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh------CCcEEEEccCceeCcCCCCCCcCcHHHHHHHH
Confidence             00    00001112344567899999999999999999875      689999999999998754321   1111111 


Q ss_pred             HHHHH-----HhhC---------CCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          292 FTVLK-----LLGL---------LQSPEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       292 ~~~~~-----~~~~---------~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                      .....     +...         +.+++|+|++++.++...+..+|+.|..++|.
T Consensus       216 ~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          216 AVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCG
T ss_pred             HHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCC
Confidence            11111     2211         45899999999976653234467777777665

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=4.7e-23  Score=192.91  Aligned_cols=242  Identities=14%  Similarity=0.083  Sum_probs=166.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEE-EecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF-QVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~-~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++++|+||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.... +.++.++ .+|++|.+++.+++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~-----   81 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVI-----   81 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHH-----
Confidence            4678999999999999999999999999999999999887766665554432 2468888 89999988765543     


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc----
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN----  214 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~----  214 (369)
                              .++|++|||||.....     +++++.+++|+.++..+++++.+.   .+ .++||++||..++....    
T Consensus        82 --------~~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~---~~-~~~iv~~SS~~~~~~~~~~~~  144 (342)
T 1y1p_A           82 --------KGAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAAT---PS-VKRFVLTSSTVSALIPKPNVE  144 (342)
T ss_dssp             --------TTCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTC---TT-CCEEEEECCGGGTCCCCTTCC
T ss_pred             --------cCCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhC---CC-CcEEEEeccHHHhcCCCCCCC
Confidence                    2589999999976432     345779999999999999988652   12 47999999987653211    


Q ss_pred             -ccCCCccccccc------ccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---
Q 017580          215 -AQVNNETITGKF------FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---  284 (369)
Q Consensus       215 -~~~~~~~~~~~~------~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~---  284 (369)
                       .+++.+......      .....+..+...|+.||++.+.+++.++++++    .++++++++||.+.++......   
T Consensus       145 ~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~~~rp~~v~g~~~~~~~~~~  220 (342)
T 1y1p_A          145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK----PHFTLNAVLPNYTIGTIFDPETQSG  220 (342)
T ss_dssp             CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC----CSSEEEEEEESEEECCCSCTTTCCC
T ss_pred             CcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcC----CCceEEEEcCCceECCCCCCCCCCc
Confidence             111111100000      00001234668999999999999999999985    4899999999999998764321   


Q ss_pred             hHHHHHHHHH------HH---HhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017580          285 SFLSLMAFTV------LK---LLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  329 (369)
Q Consensus       285 ~~~~~~~~~~------~~---~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~  329 (369)
                      ..........      ..   ....+.+++|+|++++.++.. +...|.++++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~-~~~~g~~~~~~  273 (342)
T 1y1p_A          221 STSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL-PQIERRRVYGT  273 (342)
T ss_dssp             HHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC-TTCCSCEEEEC
T ss_pred             cHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC-cccCCceEEEe
Confidence            1111111000      00   122457899999999976654 33456555444

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.91  E-value=2.2e-23  Score=193.74  Aligned_cols=241  Identities=12%  Similarity=0.024  Sum_probs=170.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +.++|+||||+|+||++++++|+++|++|++++|+.+. +.    +       ++.++.+|++|.+++.++++.      
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~------   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD------   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH------
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh------
Confidence            35799999999999999999999999999999998754 11    1       578899999999998887764      


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc---cccCC
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF---NAQVN  218 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~---~~~~~  218 (369)
                           +++|++|||||....  ..+.+++++.+++|+.++..+++++ +.+.  + .++||++||.+.+...   ..+++
T Consensus        73 -----~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-~~~iv~~SS~~v~g~~~~~~~~~~  141 (321)
T 2pk3_A           73 -----IKPDYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-DCRILTIGSSEEYGMILPEESPVS  141 (321)
T ss_dssp             -----HCCSEEEECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-CCEEEEEEEGGGTBSCCGGGCSBC
T ss_pred             -----cCCCEEEEcCcccch--hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-CCeEEEEccHHhcCCCCCCCCCCC
Confidence                 359999999997532  1223467889999999999999998 5552  1 4799999998765321   11111


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH---
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL---  295 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~---  295 (369)
                                +..+.++...|+.||++.+.+++.++.++      ++++++++||.+.++.................   
T Consensus       142 ----------E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~  205 (321)
T 2pk3_A          142 ----------EENQLRPMSPYGVSKASVGMLARQYVKAY------GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEM  205 (321)
T ss_dssp             ----------TTSCCBCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHT
T ss_pred             ----------CCCCCCCCCccHHHHHHHHHHHHHHHHHc------CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhc
Confidence                      12344566799999999999999998765      68999999999998876532111111111111   


Q ss_pred             H---H---------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          296 K---L---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       296 ~---~---------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      .   +         ...+.+++|+|++++.++...  ..|..|..+++.+..          .+++.+...+.++.
T Consensus       206 g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~g~~~~i~~~~~~s----------~~e~~~~i~~~~g~  269 (321)
T 2pk3_A          206 EKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG--KTGDVYNVCSGIGTR----------IQDVLDLLLAMANV  269 (321)
T ss_dssp             TSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEESCSCEEE----------HHHHHHHHHHHSSS
T ss_pred             CCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC--CCCCeEEeCCCCCee----------HHHHHHHHHHHhCC
Confidence            0   0         112468999999999766543  346667666666654          33455555555543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=2.1e-23  Score=195.41  Aligned_cols=255  Identities=15%  Similarity=0.051  Sum_probs=176.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+...+..+++.... +.++.++.+|++|.+++.+++++      
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~------   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA------   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH------
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc------
Confidence            46799999999999999999999999999999998877666666665443 34688999999999998887764      


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                           .++|++|||||....  ....+..++.+++|+.++..+++++    ++.+ .++||++||.+.+......     
T Consensus        77 -----~~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~SS~~~~g~~~~~-----  139 (341)
T 3enk_A           77 -----HPITAAIHFAALKAV--GESVAKPIEYYRNNLDSLLSLLRVM----RERA-VKRIVFSSSATVYGVPERS-----  139 (341)
T ss_dssp             -----SCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHH----HHTT-CCEEEEEEEGGGBCSCSSS-----
T ss_pred             -----cCCcEEEECcccccc--CccccChHHHHHHHHHHHHHHHHHH----HhCC-CCEEEEEecceEecCCCCC-----
Confidence                 469999999997532  1123445678999999999887765    3333 4799999997765321111     


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc----c-----hhHHHHHHH
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE----V-----PSFLSLMAF  292 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~----~-----~~~~~~~~~  292 (369)
                          ...+..+..+...|+.||++.+.+++.++.++     .++++++++||.+..+....    .     .........
T Consensus       140 ----~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~  210 (341)
T 3enk_A          140 ----PIDETFPLSATNPYGQTKLMAEQILRDVEAAD-----PSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQ  210 (341)
T ss_dssp             ----SBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHC-----TTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHH
T ss_pred             ----CCCCCCCCCCCChhHHHHHHHHHHHHHHhhcC-----CCceEEEEeeccccCCccccccCCCcccCccchHHHHHH
Confidence                01112445566789999999999999999885     36899999999987663211    0     011111111


Q ss_pred             HHHH---Hh---------------hCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCCHHHHHHHHHHH
Q 017580          293 TVLK---LL---------------GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTS  353 (369)
Q Consensus       293 ~~~~---~~---------------~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~  353 (369)
                      ....   ++               ..+..++|+|++++.++... +...|..|..++|++..          .+++.+..
T Consensus       211 ~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s----------~~e~~~~i  280 (341)
T 3enk_A          211 VAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYS----------VLEVVRAF  280 (341)
T ss_dssp             HHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEE----------HHHHHHHH
T ss_pred             HHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCcee----------HHHHHHHH
Confidence            1100   00               11356799999999766542 23456777777777665          34455555


Q ss_pred             HHhhhc
Q 017580          354 CNLFIN  359 (369)
Q Consensus       354 ~~~~~~  359 (369)
                      .+.++.
T Consensus       281 ~~~~g~  286 (341)
T 3enk_A          281 EKASGR  286 (341)
T ss_dssp             HHHHCS
T ss_pred             HHHhCC
Confidence            565554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.91  E-value=2e-24  Score=192.75  Aligned_cols=203  Identities=14%  Similarity=0.103  Sum_probs=145.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++++++||||+||||++++++|+++|+  +|++++|++++.++..        ..++.++.+|++|++++.+++     
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~-----   82 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAF-----   82 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGG-----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHh-----
Confidence            4578999999999999999999999999  9999999976543211        125788999999998876543     


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                              .++|++|||||....     .+.+++.+++|+.++..+++++.+    .+ .++||++||..+.        
T Consensus        83 --------~~~d~vi~~ag~~~~-----~~~~~~~~~~n~~~~~~~~~~~~~----~~-~~~iv~~SS~~~~--------  136 (242)
T 2bka_A           83 --------QGHDVGFCCLGTTRG-----KAGAEGFVRVDRDYVLKSAELAKA----GG-CKHFNLLSSKGAD--------  136 (242)
T ss_dssp             --------SSCSEEEECCCCCHH-----HHHHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCC--------
T ss_pred             --------cCCCEEEECCCcccc-----cCCcccceeeeHHHHHHHHHHHHH----CC-CCEEEEEccCcCC--------
Confidence                    259999999997532     245678999999999998887543    33 4799999998765        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCe-EEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV-SVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                  .  ++...|+.||++++.+++.+          ++ ++++++||++.|+..................+
T Consensus       137 ------------~--~~~~~Y~~sK~~~e~~~~~~----------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~  192 (242)
T 2bka_A          137 ------------K--SSNFLYLQVKGEVEAKVEEL----------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLP  192 (242)
T ss_dssp             ------------T--TCSSHHHHHHHHHHHHHHTT----------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCC
T ss_pred             ------------C--CCcchHHHHHHHHHHHHHhc----------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccC
Confidence                        2  12357999999999887543          34 79999999999997543211110000000011


Q ss_pred             ----hhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          298 ----LGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       298 ----~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                          .+++.+++|+|+.+++++..+ ...|.++.
T Consensus       193 ~~~~~~~~~~~~dva~~~~~~~~~~-~~~~~~~~  225 (242)
T 2bka_A          193 DSWASGHSVPVVTVVRAMLNNVVRP-RDKQMELL  225 (242)
T ss_dssp             TTGGGGTEEEHHHHHHHHHHHHTSC-CCSSEEEE
T ss_pred             ccccCCcccCHHHHHHHHHHHHhCc-cccCeeEe
Confidence                345679999999999765433 33355544

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.91  E-value=1.6e-23  Score=196.40  Aligned_cols=257  Identities=12%  Similarity=0.080  Sum_probs=171.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++|+||||+|+||.+++++|+++|++|++++|+.+..+.  +.+.......++.++.+|++|.+++.++++.+     
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----
Confidence            57899999999999999999999999999999998765432  12222222347889999999999988877653     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                            ++|++|||||....  +.+.+++++.+++|+.++..+++++.+. . .  .++||++||.+.+......     
T Consensus        75 ------~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~-~--~~~iv~~SS~~vyg~~~~~-----  137 (345)
T 2z1m_A           75 ------QPDEVYNLAAQSFV--GVSFEQPILTAEVDAIGVLRILEALRTV-K-P--DTKFYQASTSEMFGKVQEI-----  137 (345)
T ss_dssp             ------CCSEEEECCCCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH-C-T--TCEEEEEEEGGGGCSCSSS-----
T ss_pred             ------CCCEEEECCCCcch--hhhhhCHHHHHHHHHHHHHHHHHHHHHh-C-C--CceEEEEechhhcCCCCCC-----
Confidence                  48999999997521  2234567889999999999999998753 1 1  2799999998765321110     


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH-----
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK-----  296 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-----  296 (369)
                          ...+..+.++...|+.||++.+.+++.++.++.......+.++++.||...|.+.................     
T Consensus       138 ----~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (345)
T 2z1m_A          138 ----PQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLG  213 (345)
T ss_dssp             ----SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEES
T ss_pred             ----CCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeC
Confidence                01112344566789999999999999999987521123456778889988887643222111100000000     


Q ss_pred             --Hhh-CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          297 --LLG-LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       297 --~~~-~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                        ... .+.+++|+|++++.++..+.  .|.|.. .++.++.          .+++.+...+.++.
T Consensus       214 ~~~~~~~~~~v~Dva~a~~~~~~~~~--~~~~~i-~~~~~~s----------~~e~~~~i~~~~g~  266 (345)
T 2z1m_A          214 NLNAKRDWGYAPEYVEAMWLMMQQPE--PDDYVI-ATGETHT----------VREFVEKAAKIAGF  266 (345)
T ss_dssp             CTTCEECCEEHHHHHHHHHHHHTSSS--CCCEEE-CCSCCEE----------HHHHHHHHHHHTTC
T ss_pred             CCCceeeeEEHHHHHHHHHHHHhCCC--CceEEE-eCCCCcc----------HHHHHHHHHHHhCC
Confidence              011 26789999999997664332  355544 4455543          33455555555554

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.90  E-value=1.9e-23  Score=196.42  Aligned_cols=219  Identities=16%  Similarity=0.182  Sum_probs=163.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSRE-GF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~-G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++|+|+||||+|+||++++++|+++ |+ +|++++|++.+...+.+++.    ..++.++.+|++|.+++.++++   
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~---   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALE---   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTT---
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHh---
Confidence            467899999999999999999999999 98 99999999887766665552    3578999999999888766543   


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                                ++|+||||||....  .......++.+++|+.|+.++++++.+.    + .++||++||..+.       
T Consensus        91 ----------~~D~Vih~Aa~~~~--~~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~-v~~~V~~SS~~~~-------  146 (344)
T 2gn4_A           91 ----------GVDICIHAAALKHV--PIAEYNPLECIKTNIMGASNVINACLKN----A-ISQVIALSTDKAA-------  146 (344)
T ss_dssp             ----------TCSEEEECCCCCCH--HHHHHSHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGS-------
T ss_pred             ----------cCCEEEECCCCCCC--CchhcCHHHHHHHHHHHHHHHHHHHHhC----C-CCEEEEecCCccC-------
Confidence                      48999999997531  1123445689999999999999998775    1 4799999996654       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-HH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-LK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~  296 (369)
                                   .   +...|+.||++.+.++++++++++   ..++++++++||.|.++...-.+.......... ..
T Consensus       147 -------------~---p~~~Y~~sK~~~E~~~~~~~~~~~---~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~  207 (344)
T 2gn4_A          147 -------------N---PINLYGATKLCSDKLFVSANNFKG---SSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEI  207 (344)
T ss_dssp             -------------S---CCSHHHHHHHHHHHHHHHGGGCCC---SSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCE
T ss_pred             -------------C---CccHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCce
Confidence                         2   246899999999999999998876   688999999999999876432222111110000 00


Q ss_pred             H------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017580          297 L------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  330 (369)
Q Consensus       297 ~------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~  330 (369)
                      +      ...+.+++|+|+.++.++...  ..|..|...+
T Consensus       208 ~i~~~~~~r~~i~v~D~a~~v~~~l~~~--~~g~~~~~~~  245 (344)
T 2gn4_A          208 PITDIRMTRFWITLDEGVSFVLKSLKRM--HGGEIFVPKI  245 (344)
T ss_dssp             EESCTTCEEEEECHHHHHHHHHHHHHHC--CSSCEEEECC
T ss_pred             EEeCCCeEEeeEEHHHHHHHHHHHHhhc--cCCCEEecCC
Confidence            0      112468999999999776543  2466665443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.90  E-value=5.1e-23  Score=194.34  Aligned_cols=244  Identities=14%  Similarity=0.097  Sum_probs=166.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +|+||||+|+||++++++|+++ |++|++++|+.  ...+.+ +++.   ...++.++.+|++|.+++.+++++      
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~------   71 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDSAEITRIFEQ------   71 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHHH------
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCHHHHHHHHhh------
Confidence            4999999999999999999998 79999999875  222221 1111   134789999999999998887764      


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC----CCCeEEEEcCCcccccccc--
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----VPSRIVNVTSFTHRNVFNA--  215 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~----~~g~IV~vsS~~~~~~~~~--  215 (369)
                           .++|+||||||....  +.+.+.+++.+++|+.++..+++++.+.|...+    ..++||++||.+.+.....  
T Consensus        72 -----~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~  144 (361)
T 1kew_A           72 -----YQPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPD  144 (361)
T ss_dssp             -----HCCSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGG
T ss_pred             -----cCCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccc
Confidence                 259999999997531  223466788999999999999999999875321    1259999999765422110  


Q ss_pred             cC-CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          216 QV-NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       216 ~~-~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                      .. ...+.  ....+..+.++...|+.||++.+.+++.++.++      ++++++++||.|.++................
T Consensus       145 ~~~~~~~~--~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~  216 (361)
T 1kew_A          145 EVENSVTL--PLFTETTAYAPSSPYSASKASSDHLVRAWRRTY------GLPTIVTNCSNNYGPYHFPEKLIPLVILNAL  216 (361)
T ss_dssp             GSCTTSCC--CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEESTTCCTTSHHHHHHHHHH
T ss_pred             cccccccC--CCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCcEEEEeeceeECCCCCcccHHHHHHHHHH
Confidence            00 00000  011112345567799999999999999999876      5889999999999987542111111111111


Q ss_pred             H-HHh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          295 L-KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       295 ~-~~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      . .+.         ..+.+++|+|++++.++...  ..|+.|..+++.+..
T Consensus       217 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~g~~~~v~~~~~~s  265 (361)
T 1kew_A          217 EGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG--KAGETYNIGGHNEKK  265 (361)
T ss_dssp             HTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCCCEEE
T ss_pred             cCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC--CCCCEEEecCCCeee
Confidence            0 011         13457999999999766432  467777777777654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.90  E-value=1.2e-22  Score=189.84  Aligned_cols=247  Identities=12%  Similarity=0.060  Sum_probs=170.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcc--hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++|+||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++   ....++.++.+|++|.+++.+++.    
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDL---EDDPRYTFVKGDVADYELVKELVR----   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTT---TTCTTEEEEECCTTCHHHHHHHHH----
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhh---ccCCceEEEEcCCCCHHHHHHHhh----
Confidence            4679999999999999999999997  89999998742  12111 111   113578999999999988877652    


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQV  217 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~  217 (369)
                               ++|++|||||....  +.+.+.+++.+++|+.++..+++++.+.  ..  .++||++||.+.+.... .++
T Consensus        75 ---------~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~--~~~iv~~SS~~vyg~~~~~~~  139 (336)
T 2hun_A           75 ---------KVDGVVHLAAESHV--DRSISSPEIFLHSNVIGTYTLLESIRRE--NP--EVRFVHVSTDEVYGDILKGSF  139 (336)
T ss_dssp             ---------TCSEEEECCCCCCH--HHHHHCTHHHHHHHHHHHHHHHHHHHHH--CT--TSEEEEEEEGGGGCCCSSSCB
T ss_pred             ---------CCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CC--CcEEEEeccHHHHCCCCCCCc
Confidence                     38999999997531  2234567889999999999999999877  21  37999999976542211 111


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH--
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL--  295 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--  295 (369)
                      +          +..+.++...|+.||++.+.+++.++.++      ++++++++||.+.++.................  
T Consensus       140 ~----------E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~  203 (336)
T 2hun_A          140 T----------ENDRLMPSSPYSATKAASDMLVLGWTRTY------NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGL  203 (336)
T ss_dssp             C----------TTBCCCCCSHHHHHHHHHHHHHHHHHHHT------TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTC
T ss_pred             C----------CCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCC
Confidence            1          11344556789999999999999998865      68999999999999875321111111111000  


Q ss_pred             --------HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          296 --------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       296 --------~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                              .....+.+++|+|++++.++..  ...|+.|..+++.+..          .+++.+...+.++..
T Consensus       204 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~--~~~g~~~~v~~~~~~s----------~~e~~~~i~~~~g~~  264 (336)
T 2hun_A          204 KIPIYGTGKNVRDWLYVEDHVRAIELVLLK--GESREIYNISAGEEKT----------NLEVVKIILRLMGKG  264 (336)
T ss_dssp             CEEEETC---CEEEEEHHHHHHHHHHHHHH--CCTTCEEEECCSCEEC----------HHHHHHHHHHHTTCC
T ss_pred             CceEeCCCCceeeeEEHHHHHHHHHHHHhC--CCCCCEEEeCCCCccc----------HHHHHHHHHHHhCCC
Confidence                    0112346799999999976543  2357777777776654          344666666666554

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=2.9e-22  Score=188.77  Aligned_cols=251  Identities=11%  Similarity=-0.007  Sum_probs=171.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC---CCcEEEEEecCCChHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK---DARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~---~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +++++|+||||+|+||++++++|+++|++|++++|+.....+..+.+.+...   ..++.++.+|++|.+++.++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            4578999999999999999999999999999999976432222222221111   2468899999999988776544   


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-c
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-Q  216 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~  216 (369)
                                ++|++||+||.....  .+.+++++.+++|+.++..+++++.+.    + .++||++||...+..... +
T Consensus       102 ----------~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~  164 (352)
T 1sb8_A          102 ----------GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLP  164 (352)
T ss_dssp             ----------TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSS
T ss_pred             ----------CCCEEEECCcccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeccHHhcCCCCCCC
Confidence                      489999999975311  134667889999999999999988653    2 479999999877633211 1


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---h-HHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---S-FLSLMAF  292 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~---~-~~~~~~~  292 (369)
                      +.          +..+..+...|+.||++.+.+++.++.++      ++++++++||.+.++......   . .......
T Consensus       165 ~~----------E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~  228 (352)
T 1sb8_A          165 KV----------EDTIGKPLSPYAVTKYVNELYADVFSRCY------GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSS  228 (352)
T ss_dssp             BC----------TTCCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHH
T ss_pred             CC----------CCCCCCCCChhHHHHHHHHHHHHHHHHHc------CCCEEEEEECceeCcCCCCCcchhhHHHHHHHH
Confidence            11          11333456789999999999999998875      588999999999988654220   1 1111111


Q ss_pred             H-HHHHh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhh
Q 017580          293 T-VLKLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF  357 (369)
Q Consensus       293 ~-~~~~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~  357 (369)
                      . ...+.         ..+..++|+|++++.++...+...|..|...++.+..          .+++.+...+.+
T Consensus       229 ~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s----------~~e~~~~i~~~~  293 (352)
T 1sb8_A          229 MIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTS----------LNQLFFALRDGL  293 (352)
T ss_dssp             HHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEE----------HHHHHHHHHHHH
T ss_pred             HHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCcc----------HHHHHHHHHHHH
Confidence            1 00111         1346799999999976655334456677666666654          334555555555

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.90  E-value=2.8e-22  Score=189.13  Aligned_cols=242  Identities=14%  Similarity=0.049  Sum_probs=166.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++|+||||+|+||.+++++|+++|++|++++|+.+......+.+.   ...++.++.+|+++.+++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc----
Confidence            457899999999999999999999999999999998766544444332   1347889999999999988877643    


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                             ++|+||||||...  ...+.+.+++.+++|+.++..+++++.+.   .+ .++||++||...+........  
T Consensus        80 -------~~d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~-~~~~v~~SS~~vyg~~~~~~~--  144 (357)
T 1rkx_A           80 -------QPEIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG-VKAVVNITSDKCYDNKEWIWG--  144 (357)
T ss_dssp             -------CCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC-CCEEEEECCGGGBCCCCSSSC--
T ss_pred             -------CCCEEEECCCCcc--cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC-CCeEEEecCHHHhCCCCcCCC--
Confidence                   4899999999631  12345667889999999999999998763   11 379999999876532211000  


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEecCCcccCCccccchhHH-HHHHHHHH-
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD---KSRHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVL-  295 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~---~~~~i~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~-  295 (369)
                            ..+..+..+...|+.||++.+.+++.++.++...   .+.++++++++||.+.++......... ........ 
T Consensus       145 ------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g  218 (357)
T 1rkx_A          145 ------YRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQS  218 (357)
T ss_dssp             ------BCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTT
T ss_pred             ------CCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcC
Confidence                  0111244456789999999999999999887200   013899999999999987542111111 11110000 


Q ss_pred             HH--------hhCCCCHHHHHHHHHHHhcC---CCCCcccEEeCCC
Q 017580          296 KL--------LGLLQSPEKGINSVLDAALA---PPETSGVYFFGGK  330 (369)
Q Consensus       296 ~~--------~~~~~~~~e~A~~v~~~~l~---~~~~sG~~~~~~~  330 (369)
                      .+        ...+..++|+|++++.++..   .+...|..|...+
T Consensus       219 ~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~  264 (357)
T 1rkx_A          219 QPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGP  264 (357)
T ss_dssp             CCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCC
T ss_pred             CCEEECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECC
Confidence            00        11246789999999976643   2223345555554

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.89  E-value=1.3e-23  Score=196.38  Aligned_cols=242  Identities=11%  Similarity=0.049  Sum_probs=163.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..++++++|+||||+|+||++++++|+++|++|++++|+.+...+..++      -.++.++.+|++|.+++.++++++ 
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------l~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP------VAGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS------CTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc------cCCceEEEeeCCCHHHHHHHHhhc-
Confidence            3467899999999999999999999999999999999976532211111      136889999999999988877643 


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc--
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA--  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~--  215 (369)
                                ++|+||||||.....   +.++++  +++|+.++..+++++...    + .++||++||.+.+.....  
T Consensus        88 ----------~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~----~-~~~iV~~SS~~~~~~~~~~~  147 (330)
T 2pzm_A           88 ----------KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA----G-VKRLLNFQTALCYGRPATVP  147 (330)
T ss_dssp             ----------CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH----T-CSEEEEEEEGGGGCSCSSSS
T ss_pred             ----------CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc----C-CCEEEEecCHHHhCCCccCC
Confidence                      499999999986432   445555  999999999999998742    2 479999999876532111  


Q ss_pred             -cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeE-EEEecCCcccCCccccchhHHHHHHHH
Q 017580          216 -QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS-VIAADPGVVKTNIMREVPSFLSLMAFT  293 (369)
Q Consensus       216 -~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~-v~~v~PG~v~T~~~~~~~~~~~~~~~~  293 (369)
                       +++++          .  .+...|+.||++.+.+++.+  ++.   ...|| ++++.||. .|++...+.   ......
T Consensus       148 ~~~~E~----------~--~~~~~Y~~sK~~~e~~~~~~--~~~---~~~iR~~~v~gp~~-~~~~~~~~~---~~~~~~  206 (330)
T 2pzm_A          148 IPIDSP----------T--APFTSYGISKTAGEAFLMMS--DVP---VVSLRLANVTGPRL-AIGPIPTFY---KRLKAG  206 (330)
T ss_dssp             BCTTCC----------C--CCCSHHHHHHHHHHHHHHTC--SSC---EEEEEECEEECTTC-CSSHHHHHH---HHHHTT
T ss_pred             CCcCCC----------C--CCCChHHHHHHHHHHHHHHc--CCC---EEEEeeeeeECcCC-CCCHHHHHH---HHHHcC
Confidence             11111          1  24568999999999998877  443   44566 66777775 444322110   000000


Q ss_pred             HHHH----hhCCCCHHHHHH-HHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          294 VLKL----LGLLQSPEKGIN-SVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       294 ~~~~----~~~~~~~~e~A~-~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      ....    ...+.+++|+|+ +++.++.. +.  |..|..++|.+..          .+++.+...+.++..
T Consensus       207 ~~~~~~~~~~~~i~~~Dva~~a~~~~~~~-~~--g~~~~v~~~~~~s----------~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          207 QKCFCSDTVRDFLDMSDFLAIADLSLQEG-RP--TGVFNVSTGEGHS----------IKEVFDVVLDYVGAT  265 (330)
T ss_dssp             CCCCEESCEECEEEHHHHHHHHHHHTSTT-CC--CEEEEESCSCCEE----------HHHHHHHHHHHHTCC
T ss_pred             CEEeCCCCEecceeHHHHHHHHHHHHhhc-CC--CCEEEeCCCCCCC----------HHHHHHHHHHHhCCC
Confidence            0000    234578999999 99965433 22  6777777776654          444666666666654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=3.1e-22  Score=176.18  Aligned_cols=176  Identities=10%  Similarity=0.059  Sum_probs=131.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH-HCCCEEEEEeCCcc-hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALS-REGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La-~~G~~Vvl~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|+++||||+||||++++++|+ ++|++|++++|+++ +++++.    ..  ..++.++.+|++|+++++++++      
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~------   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT------   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT------
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc------
Confidence            3789999999999999999999 89999999999987 655443    11  4578999999999998877654      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                             ++|++|||||..                 |+.     ++.+++.|++.+ .++||++||..+.          
T Consensus        73 -------~~d~vv~~ag~~-----------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~----------  112 (221)
T 3r6d_A           73 -------NAEVVFVGAMES-----------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLS----------  112 (221)
T ss_dssp             -------TCSEEEESCCCC-----------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTT----------
T ss_pred             -------CCCEEEEcCCCC-----------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceec----------
Confidence                   389999999953                 322     788888888765 6799999998876          


Q ss_pred             ccccccccccCCCchhh----------hhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccchhHHHH
Q 017580          221 TITGKFFLRSKCYPCAR----------IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVPSFLSL  289 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~----------~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~-~~~~~~~~~~~  289 (369)
                                .+.+...          .|+.+|.+++.+.+          ..++++++|+||++.++ ...........
T Consensus       113 ----------~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~----------~~~i~~~~vrpg~v~~~~~~~~~~~~~~~  172 (221)
T 3r6d_A          113 ----------GEFPVALEKWTFDNLPISYVQGERQARNVLR----------ESNLNYTILRLTWLYNDPEXTDYELIPEG  172 (221)
T ss_dssp             ----------SCSCHHHHHHHHHTSCHHHHHHHHHHHHHHH----------HSCSEEEEEEECEEECCTTCCCCEEECTT
T ss_pred             ----------CCCCcccccccccccccHHHHHHHHHHHHHH----------hCCCCEEEEechhhcCCCCCcceeeccCC
Confidence                      2222222          79999999987664          24799999999999887 33222110000


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHh
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAA  315 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~  315 (369)
                           ....+...+++|+|+.+++++
T Consensus       173 -----~~~~~~~~~~~dvA~~~~~l~  193 (221)
T 3r6d_A          173 -----AQFNDAQVSREAVVKAIFDIL  193 (221)
T ss_dssp             -----SCCCCCEEEHHHHHHHHHHHH
T ss_pred             -----ccCCCceeeHHHHHHHHHHHH
Confidence                 001123568999999999877

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.88  E-value=1.7e-21  Score=183.24  Aligned_cols=253  Identities=11%  Similarity=-0.008  Sum_probs=177.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCC---CcEEEEEecCCChHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD---ARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~---~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +++++|+||||+|+||++++++|+++|++|++++|+..........+....+.   .++.++.+|++|.+++.++++   
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---
Confidence            45789999999999999999999999999999999876555555555432211   578999999999987766543   


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-c
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-Q  216 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~  216 (369)
                                ++|++||+||....  ..+.++.+..+++|+.++..+++++...    + .+++|++||...+..... +
T Consensus       100 ----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vyg~~~~~~  162 (351)
T 3ruf_A          100 ----------GVDHVLHQAALGSV--PRSIVDPITTNATNITGFLNILHAAKNA----Q-VQSFTYAASSSTYGDHPALP  162 (351)
T ss_dssp             ----------TCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSS
T ss_pred             ----------CCCEEEECCccCCc--chhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEecHHhcCCCCCCC
Confidence                      49999999997422  2234556788999999999999987543    2 469999999876633211 1


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SFLSLMAF  292 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----~~~~~~~~  292 (369)
                      ++          +..+..+...|+.||.+.+.+++.++.+.      ++++++++||.+..+......    ........
T Consensus       163 ~~----------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~  226 (351)
T 3ruf_A          163 KV----------EENIGNPLSPYAVTKYVNEIYAQVYARTY------GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAA  226 (351)
T ss_dssp             BC----------TTCCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHH
T ss_pred             Cc----------cCCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHH
Confidence            11          11344556789999999999999998875      578999999999877543221    11111111


Q ss_pred             HHH-HHh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          293 TVL-KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       293 ~~~-~~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      ... .+.         ..+..++|+|++++.++...+...|..|...++++..          .+++++...+.++.
T Consensus       227 ~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s----------~~e~~~~i~~~~g~  293 (351)
T 3ruf_A          227 MLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTT----------LNELSGYIYDELNL  293 (351)
T ss_dssp             HHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEE----------HHHHHHHHHHHHHT
T ss_pred             HHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCccc----------HHHHHHHHHHHhCc
Confidence            100 010         1245699999999977666445567777777777665          45566677777765

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.88  E-value=7.4e-22  Score=186.70  Aligned_cols=246  Identities=16%  Similarity=0.112  Sum_probs=161.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH--CCCEEEEEeCCcchHHHHHHHH-----HhhcCCCcEEEEEecCCChHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSR--EGFHVVLVGRSSHLLSETMADI-----TSRNKDARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~--~G~~Vvl~~r~~~~~~~~~~~~-----~~~~~~~~v~~~~~Dls~~~~i~~~  132 (369)
                      ++++++|+||||+|+||++++++|++  +|++|++++|+...........     .....+.++.++.+|++|.++++++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            57789999999999999999999999  9999999999765211100000     0011244678999999999887765


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                          .        ..++|+||||||+...    +.+.++..+++|+.++..+++++..    .  +++||++||...+..
T Consensus        87 ----~--------~~~~D~vih~A~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~~~V~~SS~~vyg~  144 (362)
T 3sxp_A           87 ----E--------KLHFDYLFHQAAVSDT----TMLNQELVMKTNYQAFLNLLEIARS----K--KAKVIYASSAGVYGN  144 (362)
T ss_dssp             ----T--------TSCCSEEEECCCCCGG----GCCCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGGCS
T ss_pred             ----h--------ccCCCEEEECCccCCc----cccCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEeCcHHHhCC
Confidence                1        2569999999996532    4466788999999999999998733    2  356999999665533


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---h-HHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---S-FLS  288 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~---~-~~~  288 (369)
                      ...+...          ..+..+...|+.||++.+.+++.++.+        +.++.+.|+.+..|-.....   . ...
T Consensus       145 ~~~~~~E----------~~~~~p~~~Y~~sK~~~E~~~~~~~~~--------~~~~~lR~~~v~Gp~~~~~~~~~~~~~~  206 (362)
T 3sxp_A          145 TKAPNVV----------GKNESPENVYGFSKLCMDEFVLSHSND--------NVQVGLRYFNVYGPREFYKEKTASMVLQ  206 (362)
T ss_dssp             CCSSBCT----------TSCCCCSSHHHHHHHHHHHHHHHTTTT--------SCEEEEEECSEESTTCGGGGGGSCHHHH
T ss_pred             CCCCCCC----------CCCCCCCChhHHHHHHHHHHHHHHhcc--------CCEEEEEeCceeCcCCCCCCcchhHHHH
Confidence            2222211          134455678999999999998887643        45777778777665433211   0 111


Q ss_pred             HHHHHH-HHHh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhh
Q 017580          289 LMAFTV-LKLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFI  358 (369)
Q Consensus       289 ~~~~~~-~~~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~  358 (369)
                      ...... ..+.         ..+..++|+|++++.++..  ..+| .|..++|++..          .+++.+...+.++
T Consensus       207 ~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~--~~~g-~~~i~~~~~~s----------~~e~~~~i~~~~g  273 (362)
T 3sxp_A          207 LALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKA--QKSG-VYNVGYSQARS----------YNEIVSILKEHLG  273 (362)
T ss_dssp             HHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTC--SSCE-EEEESCSCEEE----------HHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhc--CCCC-EEEeCCCCCcc----------HHHHHHHHHHHcC
Confidence            110000 0011         1245699999999965433  3467 66666666654          3445555555555

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.88  E-value=1.5e-21  Score=183.41  Aligned_cols=254  Identities=13%  Similarity=0.071  Sum_probs=168.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHC--CCEEEEEeCCcch-HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~--G~~Vvl~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++|+||||+|+||.+++++|+++  |++|++++|+... ..+.   +... .+.++.++.+|++|.+++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---LEAI-LGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---TGGG-CSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhH---Hhhh-ccCCeEEEECCCCCHHHHHHHhh------
Confidence            68999999999999999999999  8999999997531 1111   1111 13578999999999988766543      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc--C-
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ--V-  217 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~--~-  217 (369)
                             .+|++||+||....  +.+.++++..+++|+.++..+++++.+.    +  ++||++||...+......  . 
T Consensus        75 -------~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~~  139 (348)
T 1oc2_A           75 -------KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY----D--IRFHHVSTDEVYGDLPLREDLP  139 (348)
T ss_dssp             -------TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGGCCBCCGGGST
T ss_pred             -------cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh----C--CeEEEecccceeCCCccccccc
Confidence                   26999999997531  2234567789999999999999998775    2  499999997755321100  0 


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-H
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-K  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~  296 (369)
                      ...........+..+.++...|+.||++.+.+++.++.++      ++++++++||.+.++................. .
T Consensus       140 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~  213 (348)
T 1oc2_A          140 GHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF------GVKATISNCSNNYGPYQHIEKFIPRQITNILAGI  213 (348)
T ss_dssp             TTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTC
T ss_pred             ccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCC
Confidence            0000000111122345566789999999999999998875      58999999999998875421111111111100 0


Q ss_pred             H---------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          297 L---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       297 ~---------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      +         ...+.+++|+|++++.++...  ..|+.|..+++.+..          .+++.+...+.++..
T Consensus       214 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~g~~~~i~~~~~~s----------~~e~~~~i~~~~g~~  274 (348)
T 1oc2_A          214 KPKLYGEGKNVRDWIHTNDHSTGVWAILTKG--RMGETYLIGADGEKN----------NKEVLELILEKMGQP  274 (348)
T ss_dssp             CCEEETTSCCEEECEEHHHHHHHHHHHHHHC--CTTCEEEECCSCEEE----------HHHHHHHHHHHTTCC
T ss_pred             CceEecCCCceEeeEEHHHHHHHHHHHhhCC--CCCCeEEeCCCCCCC----------HHHHHHHHHHHhCCC
Confidence            0         113467999999999766432  357777777766654          344555566665544

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.88  E-value=9.4e-22  Score=184.06  Aligned_cols=237  Identities=16%  Similarity=0.133  Sum_probs=153.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+..++... +..... ..++.++.+|++|.+++.++++      
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            57899999999999999999999999999999998765433322 111100 1368899999999988776543      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc---cC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA---QV  217 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~---~~  217 (369)
                             .+|++||+|+... ..  ..+..++.+++|+.|+.++++++.+...    .+|||++||.++......   ..
T Consensus        77 -------~~d~Vih~A~~~~-~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~----~~riV~~SS~~~~~~~~~~~~~~  142 (337)
T 2c29_D           77 -------GCTGVFHVATPMD-FE--SKDPENEVIKPTIEGMLGIMKSCAAAKT----VRRLVFTSSAGTVNIQEHQLPVY  142 (337)
T ss_dssp             -------TCSEEEECCCCCC-SS--CSSHHHHTHHHHHHHHHHHHHHHHHHSC----CCEEEEECCGGGTSCSSSCCSEE
T ss_pred             -------CCCEEEEeccccC-CC--CCChHHHHHHHHHHHHHHHHHHHHhCCC----ccEEEEeeeHhhcccCCCCCccc
Confidence                   3799999998652 11  1223357899999999999999876531    369999999875532211   01


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHH----H-
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLM----A-  291 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~----~-  291 (369)
                      +++......+.. ...++...|+.||++.+.+++.++++.      ++++++++||.|.+|.... .+......    . 
T Consensus       143 ~E~~~~~~~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g  215 (337)
T 2c29_D          143 DESCWSDMEFCR-AKKMTAWMYFVSKTLAEQAAWKYAKEN------NIDFITIIPTLVVGPFIMSSMPPSLITALSPITG  215 (337)
T ss_dssp             CTTCCCCHHHHH-HHCCTTHHHHHHHHHHHHHHHHHHHHH------TCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHT
T ss_pred             CcccCCchhhhc-ccCCccchHHHHHHHHHHHHHHHHHHc------CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcC
Confidence            111000000000 000133479999999999988877543      6899999999999887543 22111110    0 


Q ss_pred             ---HHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          292 ---FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       292 ---~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                         .....+..++.+++|+|++++.++.. +...|.|+.
T Consensus       216 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~  253 (337)
T 2c29_D          216 NEAHYSIIRQGQFVHLDDLCNAHIYLFEN-PKAEGRYIC  253 (337)
T ss_dssp             CGGGHHHHTEEEEEEHHHHHHHHHHHHHC-TTCCEEEEE
T ss_pred             CCccccccCCCCEEEHHHHHHHHHHHhcC-cccCceEEE
Confidence               00011223478999999999976543 344566644

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.88  E-value=2e-21  Score=182.52  Aligned_cols=244  Identities=15%  Similarity=0.031  Sum_probs=162.6

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ++..+.++++|+||||+|+||.+++++|+++|++|++++|+.+.              .++.++.+|++|.+++.++++ 
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~-   76 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM-   76 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT-
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh-
Confidence            34556788999999999999999999999999999999998763              357789999999988776544 


Q ss_pred             HHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                                  ++|++||+||...    .+.+.++..+++|+.++..+++++..    .+ .++||++||...+.....
T Consensus        77 ------------~~d~vih~A~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~V~~SS~~vyg~~~~  135 (347)
T 4id9_A           77 ------------GVSAVLHLGAFMS----WAPADRDRMFAVNVEGTRRLLDAASA----AG-VRRFVFASSGEVYPENRP  135 (347)
T ss_dssp             ------------TCSEEEECCCCCC----SSGGGHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGTTTTSC
T ss_pred             ------------CCCEEEECCcccC----cchhhHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEECCHHHhCCCCC
Confidence                        4899999999753    33455689999999999999998754    22 469999999766532100


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc-------------CCcccc
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK-------------TNIMRE  282 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~-------------T~~~~~  282 (369)
                      .       .....+..+..+...|+.||.+.+.+++.++.+.      ++++++++|+.+.             .+....
T Consensus       136 ~-------~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~  202 (347)
T 4id9_A          136 E-------FLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG------AMETVILRFSHTQDATELLDEDSFFSGPRFFL  202 (347)
T ss_dssp             S-------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS------SSEEEEEEECEEECGGGTTCTTSSSHHHHHBH
T ss_pred             C-------CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc------CCceEEEccceEeecccccccccccCCCCccc
Confidence            0       0011112455567789999999999999998763      7899999999997             222111


Q ss_pred             chh-------HHHHHHHHHHHH-hh-------------CC----CCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCC
Q 017580          283 VPS-------FLSLMAFTVLKL-LG-------------LL----QSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSS  337 (369)
Q Consensus       283 ~~~-------~~~~~~~~~~~~-~~-------------~~----~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~  337 (369)
                      ...       ............ .+             .+    .+++|+|++++.++..+. ..|..|...++++..  
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~~ni~~~~~~s--  279 (347)
T 4id9_A          203 RPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE-AAGGTFNLGADEPAD--  279 (347)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG-GTTEEEEESCSSCEE--
T ss_pred             ccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc-cCCCeEEECCCCccc--
Confidence            000       001111111111 11             12    678999999997665543 346666666666654  


Q ss_pred             cccCCHHHHHHHHHHHHHhhhc
Q 017580          338 ALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       338 ~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                              ..++.+...+.++.
T Consensus       280 --------~~e~~~~i~~~~g~  293 (347)
T 4id9_A          280 --------FAALLPKIAALTGL  293 (347)
T ss_dssp             --------HHHHHHHHHHHHCC
T ss_pred             --------HHHHHHHHHHHhCC
Confidence                    34456666666554

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=5e-21  Score=183.08  Aligned_cols=191  Identities=13%  Similarity=0.002  Sum_probs=137.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHH-HCCCEEEEEeCCcch---------HHHHHHHHHhhcC---CCc---EEEEEecCCChH
Q 017580           64 PVCIVTGATSGLGAAAAYALS-REGFHVVLVGRSSHL---------LSETMADITSRNK---DAR---LEAFQVDLSSFQ  127 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La-~~G~~Vvl~~r~~~~---------~~~~~~~~~~~~~---~~~---v~~~~~Dls~~~  127 (369)
                      .+|+||||+|+||.+++++|+ ++|++|++++|+...         .+.+.+.+++...   ..+   +.++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            479999999999999999999 999999999997654         3444333333221   124   889999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          128 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       128 ~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                      ++.+++++          ++++|+||||||.....  .+.+.+++.+++|+.++..+++++..    .+ .++||++||.
T Consensus        83 ~~~~~~~~----------~~~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~iv~~SS~  145 (397)
T 1gy8_A           83 FLNGVFTR----------HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLL----HK-CDKIIFSSSA  145 (397)
T ss_dssp             HHHHHHHH----------SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEG
T ss_pred             HHHHHHHh----------cCCCCEEEECCCccCcC--cchhhHHHHHHHHhHHHHHHHHHHHH----hC-CCEEEEECCH
Confidence            88777652          35699999999975321  13466788999999999999998643    22 4799999997


Q ss_pred             cccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          208 THRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                      +.+..........  ......+..+..+...|+.||++.+.+++.++.++      ++++++++||.+..+.
T Consensus       146 ~v~g~~~~~~~~~--~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          146 AIFGNPTMGSVST--NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY------GIKGICLRYFNACGAH  209 (397)
T ss_dssp             GGTBSCCC-------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECCC
T ss_pred             HHhCCCCcccccc--cccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH------CCcEEEEeccceeCCC
Confidence            6543211000000  00011112334456789999999999999999876      6899999999997664

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.87  E-value=9.1e-22  Score=184.47  Aligned_cols=240  Identities=13%  Similarity=0.061  Sum_probs=159.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREG-------FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G-------~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~  132 (369)
                      .+++++|+||||+|+||.+++++|+++|       ++|++++|+.+....        ....++.++.+|++|.+++.++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHH
Confidence            4678999999999999999999999999       899999998653221        1145788999999999988776


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                      ++            +++|++|||||....   .+.+++++.+++|+.++..+++++.+...+.+..++||++||.+.+..
T Consensus        83 ~~------------~~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~  147 (342)
T 2hrz_A           83 VE------------ARPDVIFHLAAIVSG---EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGA  147 (342)
T ss_dssp             HH------------TCCSEEEECCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCS
T ss_pred             Hh------------cCCCEEEECCccCcc---cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCC
Confidence            54            259999999997531   235678899999999999999998775432111369999999876532


Q ss_pred             c-cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEec--CCcccCCccccchhHHHH
Q 017580          213 F-NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD--PGVVKTNIMREVPSFLSL  289 (369)
Q Consensus       213 ~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~--PG~v~T~~~~~~~~~~~~  289 (369)
                      . +.++++          ..+..+...|+.||++.+.+++.++.+... ....++++.+.  ||.+.++...-.......
T Consensus       148 ~~~~~~~E----------~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~  216 (342)
T 2hrz_A          148 PLPYPIPD----------EFHTTPLTSYGTQKAICELLLSDYSRRGFF-DGIGIRLPTICIRPGKPNAAASGFFSNILRE  216 (342)
T ss_dssp             SCCSSBCT----------TCCCCCSSHHHHHHHHHHHHHHHHHHTTSC-EEEEEEECEETTCCSSCCCSGGGHHHHHHHH
T ss_pred             CCCCCcCC----------CCCCCCcchHHHHHHHHHHHHHHHHHhcCC-CceeEEeeeEEecCCCCcchhHHHHHHHHHH
Confidence            2 111111          133445678999999999999998876421 02346666666  887665432111111100


Q ss_pred             HHHHHH--HHhh-----CCCCHHHHHHHHHHHhcCCCC--CcccEEeCCCCccc
Q 017580          290 MAFTVL--KLLG-----LLQSPEKGINSVLDAALAPPE--TSGVYFFGGKGRTV  334 (369)
Q Consensus       290 ~~~~~~--~~~~-----~~~~~~e~A~~v~~~~l~~~~--~sG~~~~~~~g~~~  334 (369)
                      ......  .+.+     .+.+++|+|++++.++..+..  ..|..|... |.+.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~  269 (342)
T 2hrz_A          217 PLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSA  269 (342)
T ss_dssp             HHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEE
T ss_pred             HhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCC
Confidence            000000  0011     135799999999977654432  234555553 4443

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.87  E-value=2e-21  Score=182.39  Aligned_cols=256  Identities=12%  Similarity=0.043  Sum_probs=169.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+++++|+||||+|+||.+++++|+++|  ++|++.+|......  ...+.......++.++.+|++|.+++.++++.. 
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   97 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-   97 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence            4567899999999999999999999999  68888887642110  111222222458999999999999988887752 


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                                ++|++||+||....  ..+.+..+..+++|+.++..+++++.+.    + .+++|++||...+.......
T Consensus        98 ----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vy~~~~~~~  160 (346)
T 4egb_A           98 ----------DVQVIVNFAAESHV--DRSIENPIPFYDTNVIGTVTLLELVKKY----P-HIKLVQVSTDEVYGSLGKTG  160 (346)
T ss_dssp             ----------TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS----T-TSEEEEEEEGGGGCCCCSSC
T ss_pred             ----------CCCEEEECCcccch--hhhhhCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeCchHHhCCCCcCC
Confidence                      48999999998632  2245667889999999999999887543    2 46999999987653321110


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-H
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-K  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~  296 (369)
                              ...+..+..+...|+.||.+.+.+++.++.+.      ++++++++||.+.++................. .
T Consensus       161 --------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~  226 (346)
T 4egb_A          161 --------RFTEETPLAPNSPYSSSKASADMIALAYYKTY------QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGK  226 (346)
T ss_dssp             --------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTC
T ss_pred             --------CcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEeecceeCcCCCccchHHHHHHHHHcCC
Confidence                    11112444566789999999999999998765      57899999999988765322111111111000 0


Q ss_pred             Hhh---------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhccC
Q 017580          297 LLG---------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQ  361 (369)
Q Consensus       297 ~~~---------~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~~  361 (369)
                      +..         .+..++|+|++++.++..+.  .|..|...++.+..          .+++++...+.++...
T Consensus       227 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~~~~s----------~~e~~~~i~~~~g~~~  288 (346)
T 4egb_A          227 KLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR--VGEVYNIGGNNEKT----------NVEVVEQIITLLGKTK  288 (346)
T ss_dssp             CCEEETTSCCEECEEEHHHHHHHHHHHHHHCC--TTCEEEECCSCCEE----------HHHHHHHHHHHHTCCG
T ss_pred             CceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC--CCCEEEECCCCcee----------HHHHHHHHHHHhCCCc
Confidence            010         12458999999997665544  67677767666654          4456666666666544

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.87  E-value=1.3e-20  Score=178.50  Aligned_cols=253  Identities=11%  Similarity=0.061  Sum_probs=158.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHH-HHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~-~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++++||||+|+||++++++|+++|++|++++|+.+... +..+++....  .+.++.++.+|++|.+++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            368999999999999999999999999999999865421 1112221110  1346889999999999988877653   


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~  218 (369)
                              ++|++|||||....  ..+.++++..+++|+.++..+++++.+...++  .++||++||.+.+..... ++.
T Consensus        78 --------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~SS~~v~g~~~~~~~~  145 (372)
T 1db3_A           78 --------QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLEK--KTRFYQASTSELYGLVQEIPQK  145 (372)
T ss_dssp             --------CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGGTTCCSSSBC
T ss_pred             --------CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCCC--CcEEEEeCChhhhCCCCCCCCC
Confidence                    48999999997532  23456678899999999999999998765432  379999999876532211 111


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-ch-h-HHHHHHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VP-S-FLSLMAFTVL  295 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~-~-~~~~~~~~~~  295 (369)
                                +..+..+...|+.||++.+.+++.++.++.      +.+..+.|..+..|.... .. . ..........
T Consensus       146 ----------E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~------~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~  209 (372)
T 1db3_A          146 ----------ETTPFYPRSPYAVAKLYAYWITVNYRESYG------MYACNGILFNHESPRRGETFVTRKITRAIANIAQ  209 (372)
T ss_dssp             ----------TTSCCCCCSHHHHHHHHHHHHHHHHHHHHC------CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHT
T ss_pred             ----------ccCCCCCCChHHHHHHHHHHHHHHHHHHhC------CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHc
Confidence                      113344567899999999999999998863      444455555444332211 10 0 0001000000


Q ss_pred             H--H---h------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          296 K--L---L------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       296 ~--~---~------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      .  +   .      ..+..++|+|++++.++..+.  .+.| +..++.+..          .+++.+...+.++.
T Consensus       210 g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~-ni~~~~~~s----------~~e~~~~i~~~~g~  271 (372)
T 1db3_A          210 GLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ--PEDF-VIATGVQYS----------VRQFVEMAAAQLGI  271 (372)
T ss_dssp             TSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS--CCCE-EECCCCCEE----------HHHHHHHHHHTTTE
T ss_pred             CCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC--CceE-EEcCCCcee----------HHHHHHHHHHHhCC
Confidence            0  0   0      124679999999996543322  3444 444455544          34466666666654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.87  E-value=2.6e-22  Score=179.69  Aligned_cols=215  Identities=14%  Similarity=0.006  Sum_probs=145.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~--G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++++||||+|+||++++++|+++  |++|++++|++++.++.         ..++.++.+|++|.+++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCHHHHHHHHc----
Confidence            35789999999999999999999999  89999999987654322         2356789999999988776653    


Q ss_pred             HHhccCCCCCccEEEeccccccCC-----------CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATS-----------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~-----------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                               .+|++|||||.....           .+.+.+.+++.+++|+.++..+++++.+.    + .++||++||.
T Consensus        69 ---------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~iv~~SS~  134 (253)
T 1xq6_A           69 ---------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-VKHIVVVGSM  134 (253)
T ss_dssp             ---------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-CSEEEEEEET
T ss_pred             ---------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C-CCEEEEEcCc
Confidence                     389999999975321           11123444568899999999998887543    2 4799999998


Q ss_pred             cccccccccCCCcccccccccccCCC--chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017580          208 THRNVFNAQVNNETITGKFFLRSKCY--PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  285 (369)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~  285 (369)
                      .+....                 .+.  .....|+.+|++++.+++          ..++++++++||.+.++.......
T Consensus       135 ~~~~~~-----------------~~~~~~~~~~y~~sK~~~e~~~~----------~~~i~~~~vrpg~v~~~~~~~~~~  187 (253)
T 1xq6_A          135 GGTNPD-----------------HPLNKLGNGNILVWKRKAEQYLA----------DSGTPYTIIRAGGLLDKEGGVREL  187 (253)
T ss_dssp             TTTCTT-----------------CGGGGGGGCCHHHHHHHHHHHHH----------TSSSCEEEEEECEEECSCSSSSCE
T ss_pred             cCCCCC-----------------CccccccchhHHHHHHHHHHHHH----------hCCCceEEEecceeecCCcchhhh
Confidence            765110                 111  111347779999887763          257999999999998875421100


Q ss_pred             HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017580          286 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  331 (369)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g  331 (369)
                      ...... ........+.+++|+|+.+++++..+ ...|+.|...++
T Consensus       188 ~~~~~~-~~~~~~~~~~~~~Dva~~~~~~~~~~-~~~g~~~~i~~~  231 (253)
T 1xq6_A          188 LVGKDD-ELLQTDTKTVPRADVAEVCIQALLFE-EAKNKAFDLGSK  231 (253)
T ss_dssp             EEESTT-GGGGSSCCEEEHHHHHHHHHHHTTCG-GGTTEEEEEEEC
T ss_pred             hccCCc-CCcCCCCcEEcHHHHHHHHHHHHcCc-cccCCEEEecCC
Confidence            000000 00001124679999999999765443 335665555443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.87  E-value=9.8e-22  Score=181.80  Aligned_cols=240  Identities=15%  Similarity=0.047  Sum_probs=166.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++|+||||+|+||++++++|+++|++|++++|+.+...+..        ...+.++.+|++|.+ +.++           
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~-----------   60 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAG-----------   60 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTT-----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhh-----------
Confidence            36999999999999999999999999999999876432211        346789999999976 4332           


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                        ... |++||+||...  ...+.+.++..+++|+.++..+++++...    + .++||++||...+.......      
T Consensus        61 --~~~-d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~vyg~~~~~~------  124 (312)
T 3ko8_A           61 --IKG-DVVFHFAANPE--VRLSTTEPIVHFNENVVATFNVLEWARQT----G-VRTVVFASSSTVYGDADVIP------  124 (312)
T ss_dssp             --CCC-SEEEECCSSCS--SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSSSS------
T ss_pred             --cCC-CEEEECCCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeCcHHHhCCCCCCC------
Confidence              123 99999999642  24456677889999999999999988443    2 46999999987663321110      


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH--HHh---
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL--KLL---  298 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~---  298 (369)
                         ..+..+..+...|+.||++.+.+++.++.++      ++++++++||.+.++....... .........  .++   
T Consensus       125 ---~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------g~~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~  194 (312)
T 3ko8_A          125 ---TPEEEPYKPISVYGAAKAAGEVMCATYARLF------GVRCLAVRYANVVGPRLRHGVI-YDFIMKLRRNPNVLEVL  194 (312)
T ss_dssp             ---BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECTTCCSSHH-HHHHHHHHHCTTEEEEC
T ss_pred             ---CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCCEEEEeeccccCcCCCCChH-HHHHHHHHhCCCCeEEc
Confidence               1112445567799999999999999999876      6899999999999987543111 111111110  010   


Q ss_pred             ------hCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          299 ------GLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       299 ------~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                            ..+.+++|+|++++.++...  ....|..|...++++..          .+++.+...+.++.
T Consensus       195 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s----------~~e~~~~i~~~~g~  253 (312)
T 3ko8_A          195 GDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVR----------VLDIAQIVAEVLGL  253 (312)
T ss_dssp             ----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEE----------HHHHHHHHHHHHTC
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCcee----------HHHHHHHHHHHhCC
Confidence                  12456999999999776551  23456666666666654          34455555555543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.87  E-value=1.3e-21  Score=183.22  Aligned_cols=221  Identities=17%  Similarity=0.120  Sum_probs=149.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      .+|+||||+|+||.+++++|+++|++|++++|+.++.+.+    .    ..++.++.+|++|.+++.++++         
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~----~~~~~~~~~Dl~d~~~~~~~~~---------   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A----YLEPECRVAEMLDHAGLERALR---------   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G----GGCCEEEECCTTCHHHHHHHTT---------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c----cCCeEEEEecCCCHHHHHHHHc---------
Confidence            3799999999999999999999999999999987654321    1    1267889999999887765443         


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc-CCCccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ-VNNETI  222 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~-~~~~~~  222 (369)
                          ++|++||+||...    .+.+..++.+++|+.++..+++++.+.    + .++||++||...+...... ...+  
T Consensus        77 ----~~d~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~E--  141 (342)
T 2x4g_A           77 ----GLDGVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA----R-VPRILYVGSAYAMPRHPQGLPGHE--  141 (342)
T ss_dssp             ----TCSEEEEC----------------CHHHHHHHHHHHHHHHHHHH----T-CSCEEEECCGGGSCCCTTSSCBCT--
T ss_pred             ----CCCEEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHhhCcCCCCCCCCC--
Confidence                4899999999753    234567889999999999999998774    1 3799999998776432210 0011  


Q ss_pred             ccccccccCCCch----hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc-cc-chhHHHHHHHHHHH
Q 017580          223 TGKFFLRSKCYPC----ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM-RE-VPSFLSLMAFTVLK  296 (369)
Q Consensus       223 ~~~~~~~~~~~~~----~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~-~~-~~~~~~~~~~~~~~  296 (369)
                             ..+..+    ...|+.||++.+.+++.++.      . ++++++++||.+.++.. +. ..............
T Consensus       142 -------~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~------~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~  207 (342)
T 2x4g_A          142 -------GLFYDSLPSGKSSYVLCKWALDEQAREQAR------N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMT  207 (342)
T ss_dssp             -------TCCCSSCCTTSCHHHHHHHHHHHHHHHHHH------T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCC
T ss_pred             -------CCCCCccccccChHHHHHHHHHHHHHHHhh------c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCc
Confidence                   122233    67899999999999999875      3 78999999999998865 21 21111110000000


Q ss_pred             H----hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          297 L----LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       297 ~----~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                      +    ...+.+++|+|++++.++..+..  |..|..+++.
T Consensus       208 ~~~~~~~~~i~v~Dva~~~~~~~~~~~~--g~~~~v~~~~  245 (342)
T 2x4g_A          208 HYVAGQRNVIDAAEAGRGLLMALERGRI--GERYLLTGHN  245 (342)
T ss_dssp             EEECCEEEEEEHHHHHHHHHHHHHHSCT--TCEEEECCEE
T ss_pred             cccCCCcceeeHHHHHHHHHHHHhCCCC--CceEEEcCCc
Confidence            0    01146899999999977654432  6667766665

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.87  E-value=1.1e-20  Score=179.82  Aligned_cols=258  Identities=13%  Similarity=0.054  Sum_probs=161.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch-----HHHHHHHHHhhcCCC-cEEEEEecCCChHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-----LSETMADITSRNKDA-RLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~-----~~~~~~~~~~~~~~~-~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ++|+||||+|+||.+++++|+++|++|++++|+.+.     ++....++...  +. ++.++.+|++|.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            789999999999999999999999999999998653     22222111111  12 6889999999999988877653 


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                                ++|+|||+||....  ..+.+.++..+++|+.++..+++++.+...+++..++||++||...+.....++
T Consensus       106 ----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~  173 (381)
T 1n7h_A          106 ----------KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQ  173 (381)
T ss_dssp             ----------CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSB
T ss_pred             ----------CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCC
Confidence                      48999999997532  123466788999999999999999999875432247999999987653321111


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-H-
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-L-  295 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~-  295 (369)
                      .          +..+..+...|+.||++.+.+++.++.+++..-.....++.+.||...+.+...+........... . 
T Consensus       174 ~----------E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~  243 (381)
T 1n7h_A          174 S----------ETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTK  243 (381)
T ss_dssp             C----------TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCC
T ss_pred             C----------CCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCe
Confidence            1          113445567899999999999999998764100011122333444332211110010000000000 0 


Q ss_pred             ------HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          296 ------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       296 ------~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                            .....+..++|+|++++.++..+.  .| .|...++.+..          .+++.+...+.++.
T Consensus       244 ~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~~-~~~i~~~~~~s----------~~e~~~~i~~~~g~  300 (381)
T 1n7h_A          244 LFLGNLQASRDWGFAGDYVEAMWLMLQQEK--PD-DYVVATEEGHT----------VEEFLDVSFGYLGL  300 (381)
T ss_dssp             EEESCTTCEEECEEHHHHHHHHHHHHTSSS--CC-EEEECCSCEEE----------HHHHHHHHHHHTTC
T ss_pred             EEeCCCCceeeeEEHHHHHHHHHHHHhCCC--CC-eEEeeCCCCCc----------HHHHHHHHHHHcCC
Confidence                  001125679999999997664432  24 44555555554          33455555555543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.87  E-value=4.3e-22  Score=174.95  Aligned_cols=199  Identities=11%  Similarity=0.147  Sum_probs=146.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~~~~~  143 (369)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..          .++.++.+|++| .+++.+++          
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~----------   61 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQL----------   61 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTT----------
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHH----------
Confidence            599999999999999999999999999999997653321          478999999999 87766543          


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                         .++|++|||||...          +..+++|+.++..+++++.    +.+ .++||++||..+....  +..+    
T Consensus        62 ---~~~d~vi~~ag~~~----------~~~~~~n~~~~~~l~~a~~----~~~-~~~iv~~SS~~~~~~~--~~~e----  117 (219)
T 3dqp_A           62 ---HGMDAIINVSGSGG----------KSLLKVDLYGAVKLMQAAE----KAE-VKRFILLSTIFSLQPE--KWIG----  117 (219)
T ss_dssp             ---TTCSEEEECCCCTT----------SSCCCCCCHHHHHHHHHHH----HTT-CCEEEEECCTTTTCGG--GCCS----
T ss_pred             ---cCCCEEEECCcCCC----------CCcEeEeHHHHHHHHHHHH----HhC-CCEEEEECcccccCCC--cccc----
Confidence               35999999999864          2378999999999988873    332 4799999998765211  0000    


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCC
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS  303 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (369)
                             .+..+...|+.||++.+.+++      .   ..++++++++||++.++.........        .....+.+
T Consensus       118 -------~~~~~~~~Y~~sK~~~e~~~~------~---~~~i~~~ilrp~~v~g~~~~~~~~~~--------~~~~~~i~  173 (219)
T 3dqp_A          118 -------AGFDALKDYYIAKHFADLYLT------K---ETNLDYTIIQPGALTEEEATGLIDIN--------DEVSASNT  173 (219)
T ss_dssp             -------HHHHHTHHHHHHHHHHHHHHH------H---SCCCEEEEEEECSEECSCCCSEEEES--------SSCCCCEE
T ss_pred             -------cccccccHHHHHHHHHHHHHH------h---ccCCcEEEEeCceEecCCCCCccccC--------CCcCCccc
Confidence                   112346789999999998876      1   57899999999999887544321100        11235678


Q ss_pred             HHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          304 PEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       304 ~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                      ++|+|+.++.++..+ ...|+.|..++|.
T Consensus       174 ~~Dva~~i~~~l~~~-~~~g~~~~i~~g~  201 (219)
T 3dqp_A          174 IGDVADTIKELVMTD-HSIGKVISMHNGK  201 (219)
T ss_dssp             HHHHHHHHHHHHTCG-GGTTEEEEEEECS
T ss_pred             HHHHHHHHHHHHhCc-cccCcEEEeCCCC
Confidence            999999999766543 3446666655443

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.87  E-value=5.6e-21  Score=176.94  Aligned_cols=238  Identities=14%  Similarity=0.049  Sum_probs=162.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++|+||||+|+||++++++|+++|..|++..|+....+.         ....+.++.+|+++ +++.++++         
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~---------~~~~~~~~~~Dl~~-~~~~~~~~---------   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF---------VNEAARLVKADLAA-DDIKDYLK---------   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG---------SCTTEEEECCCTTT-SCCHHHHT---------
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh---------cCCCcEEEECcCCh-HHHHHHhc---------
Confidence            479999999999999999999999555555555433211         13468899999999 77766543         


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                          ++|++||+||..  ....+.+.+++.+++|+.++..+++++...    + .++||++||...+.......      
T Consensus        63 ----~~d~vih~a~~~--~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~vyg~~~~~~------  125 (313)
T 3ehe_A           63 ----GAEEVWHIAANP--DVRIGAENPDEIYRNNVLATYRLLEAMRKA----G-VSRIVFTSTSTVYGEAKVIP------  125 (313)
T ss_dssp             ----TCSEEEECCCCC--CCC-CCCCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEECCGGGGCSCSSSS------
T ss_pred             ----CCCEEEECCCCC--ChhhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEeCchHHhCcCCCCC------
Confidence                489999999964  234456778899999999999999886432    2 47999999987663221110      


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH--Hh---
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK--LL---  298 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~---  298 (369)
                         ..+..+..+...|+.||++.+.+++.++.++      +++++++.||.+.++...... ...........  +.   
T Consensus       126 ---~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~  195 (313)
T 3ehe_A          126 ---TPEDYPTHPISLYGASKLACEALIESYCHTF------DMQAWIYRFANVIGRRSTHGV-IYDFIMKLKRNPEELEIL  195 (313)
T ss_dssp             ---BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT------TCEEEEEECSCEESTTCCCSH-HHHHHHHHHHCTTEEEES
T ss_pred             ---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc------CCCEEEEeeccccCcCCCcCh-HHHHHHHHHcCCCceEEe
Confidence               1112455567789999999999999999875      689999999999887544211 11111111110  11   


Q ss_pred             ------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          299 ------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       299 ------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                            ..+..++|+|++++.++.  +...|..|...++++..          .+++.+...+.++.
T Consensus       196 ~~g~~~~~~i~v~Dva~a~~~~~~--~~~~~~~~ni~~~~~~s----------~~e~~~~i~~~~g~  250 (313)
T 3ehe_A          196 GNGEQNKSYIYISDCVDAMLFGLR--GDERVNIFNIGSEDQIK----------VKRIAEIVCEELGL  250 (313)
T ss_dssp             TTSCCEECCEEHHHHHHHHHHHTT--CCSSEEEEECCCSCCEE----------HHHHHHHHHHHTTC
T ss_pred             CCCCeEEeEEEHHHHHHHHHHHhc--cCCCCceEEECCCCCee----------HHHHHHHHHHHhCC
Confidence                  124678999999996554  44456677777777665          34455555555543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.86  E-value=1.2e-20  Score=177.19  Aligned_cols=253  Identities=13%  Similarity=0.102  Sum_probs=166.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch------HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL------LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~------~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +++|+||||+|+||.+++++|+++|++|++++|+...      ..+..+++.... +.++.++.+|++|.+++.+++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~-   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK-   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHh-
Confidence            4789999999999999999999999999999886432      223333333211 34688999999999988877653 


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-c
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-A  215 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~  215 (369)
                                .++|++||+||.....  .+.+.+++.+++|+.++..+++++..    .+ .++||++||...+.... .
T Consensus        80 ----------~~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~g~~~~~  142 (348)
T 1ek6_A           80 ----------YSFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKA----HG-VKNLVFSSSATVYGNPQYL  142 (348)
T ss_dssp             ----------CCEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGGCSCSSS
T ss_pred             ----------cCCCEEEECCCCcCcc--chhhchHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEECcHHHhCCCCCC
Confidence                      1599999999975321  13456788999999999999987543    22 47999999977653211 1


Q ss_pred             cCCCcccccccccccCCC-chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc----ccc-----hh
Q 017580          216 QVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM----REV-----PS  285 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~----~~~-----~~  285 (369)
                      ++++          ..+. +....|+.||++.+.+++.++.+ .    .++++++++|+.+-.+..    ...     ..
T Consensus       143 ~~~E----------~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~----~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~  207 (348)
T 1ek6_A          143 PLDE----------AHPTGGCTNPYGKSKFFIEEMIRDLCQA-D----KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNN  207 (348)
T ss_dssp             SBCT----------TSCCCCCSSHHHHHHHHHHHHHHHHHHH-C----TTCEEEEEEECEEECCCTTSSCCCCCSSSCCS
T ss_pred             CcCC----------CCCCCCCCCchHHHHHHHHHHHHHHHhc-C----CCcceEEEeeccccCCCcccccCcCcccchhh
Confidence            1111          1222 23678999999999999999876 3    468999999998876521    000     01


Q ss_pred             HHHHHHHHHH---HH---------------hhCCCCHHHHHHHHHHHhcCCCCCcc-cEEeCCCCccccCCcccCCHHHH
Q 017580          286 FLSLMAFTVL---KL---------------LGLLQSPEKGINSVLDAALAPPETSG-VYFFGGKGRTVNSSALSFNSKLA  346 (369)
Q Consensus       286 ~~~~~~~~~~---~~---------------~~~~~~~~e~A~~v~~~~l~~~~~sG-~~~~~~~g~~~~~~~~~~d~~~~  346 (369)
                      ..........   .+               ...+..++|+|++++.++.......| ..|...++.+..          .
T Consensus       208 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s----------~  277 (348)
T 1ek6_A          208 LMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS----------V  277 (348)
T ss_dssp             HHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE----------H
T ss_pred             HHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCcc----------H
Confidence            1111111111   00               01235689999999976654332233 666666666554          3


Q ss_pred             HHHHHHHHHhhhc
Q 017580          347 GELWTTSCNLFIN  359 (369)
Q Consensus       347 ~~lw~~~~~~~~~  359 (369)
                      +++.+...+.++.
T Consensus       278 ~e~~~~i~~~~g~  290 (348)
T 1ek6_A          278 LQMVQAMEKASGK  290 (348)
T ss_dssp             HHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHhCC
Confidence            4455666666554

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.86  E-value=4.4e-21  Score=179.35  Aligned_cols=240  Identities=13%  Similarity=0.020  Sum_probs=157.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ...+++++|+||||+|+||++++++|+++|++|++++|+.....+.   +..   -.++.++.+|++|.+++.++++.  
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~---~~~~~~~~~Dl~d~~~~~~~~~~--   87 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD---HPNLTFVEGSIADHALVNQLIGD--   87 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC---CTTEEEEECCTTCHHHHHHHHHH--
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh---cCCceEEEEeCCCHHHHHHHHhc--
Confidence            3456789999999999999999999999999999999986432111   100   14688999999999988877664  


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc----cc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN----VF  213 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~----~~  213 (369)
                               .++|+||||||.....   +.++.+  +++|+.++..+++++.+.    + .++||++||.+.+.    ..
T Consensus        88 ---------~~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~----~-~~~iV~~SS~~~~g~~~~~~  148 (333)
T 2q1w_A           88 ---------LQPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN----N-VGRFVYFQTALCYGVKPIQQ  148 (333)
T ss_dssp             ---------HCCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGCSCCCSS
T ss_pred             ---------cCCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh----C-CCEEEEECcHHHhCCCcccC
Confidence                     2599999999986432   334444  999999999999998763    2 47999999977652    11


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHH-HHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYE-LHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  292 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~-la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  292 (369)
                      ..+++++          . .+....|+.||++.+.+++. ++           .+..+.|+.+..+.... .........
T Consensus       149 ~~~~~E~----------~-~p~~~~Y~~sK~~~E~~~~~s~~-----------~~~ilR~~~v~gp~~~~-~~~~~~~~~  205 (333)
T 2q1w_A          149 PVRLDHP----------R-NPANSSYAISKSANEDYLEYSGL-----------DFVTFRLANVVGPRNVS-GPLPIFFQR  205 (333)
T ss_dssp             SBCTTSC----------C-CCTTCHHHHHHHHHHHHHHHHTC-----------CEEEEEESEEESTTCCS-SHHHHHHHH
T ss_pred             CCCcCCC----------C-CCCCCchHHHHHHHHHHHHhhhC-----------CeEEEeeceEECcCCcC-cHHHHHHHH
Confidence            1011110          1 22226899999999998876 53           35667777666554111 000011100


Q ss_pred             HHH-------HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          293 TVL-------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       293 ~~~-------~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      ...       .....+.+++|+|++++.++....   |..|..+++.+..          .+++++...+.++..
T Consensus       206 ~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---g~~~~v~~~~~~s----------~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          206 LSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG---HGAYHFSSGTDVA----------IKELYDAVVEAMALP  267 (333)
T ss_dssp             HHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC---CEEEECSCSCCEE----------HHHHHHHHHHHTTCS
T ss_pred             HHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC---CCEEEeCCCCCcc----------HHHHHHHHHHHhCCC
Confidence            000       011245789999999997665433   6777777776654          445666666666654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.86  E-value=1.6e-21  Score=188.54  Aligned_cols=239  Identities=13%  Similarity=0.067  Sum_probs=157.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc---hHHHHHHHHHhhc-------CCCcEEEEEecCCChHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH---LLSETMADITSRN-------KDARLEAFQVDLSSFQSV  129 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~---~~~~~~~~~~~~~-------~~~~v~~~~~Dls~~~~i  129 (369)
                      ...+++|+||||+|+||.+++++|+++|++|++++|+.+   ..+.+.+.+....       ...++.++.+|+++.+++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            456789999999999999999999999999999999987   4444444443321       135799999999998876


Q ss_pred             HHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          130 LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       130 ~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      .       .       .+++|+||||||....     .+.++..+++|+.++..+++++.+    .  .++||++||...
T Consensus       146 ~-------~-------~~~~d~Vih~A~~~~~-----~~~~~~~~~~Nv~g~~~l~~aa~~----~--~~~~v~~SS~~~  200 (427)
T 4f6c_A          146 V-------L-------PENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ----H--HARLIYVSTISV  200 (427)
T ss_dssp             C-------C-------SSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH----T--TCEEEEEEEGGG
T ss_pred             C-------C-------cCCCCEEEECCcccCC-----CCCHHHHHHHHHHHHHHHHHHHHh----c--CCcEEEECchHh
Confidence            6       1       3679999999998632     356788999999999999999876    2  479999999876


Q ss_pred             ccccccc-CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-----
Q 017580          210 RNVFNAQ-VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-----  283 (369)
Q Consensus       210 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-----  283 (369)
                       ...... .....+.....  ..+..+...|+.||++.+.+++.++.       .++++++++||.|.++.....     
T Consensus       201 -G~~~~~~~~~~~~~E~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~g~~~~ivRpg~v~G~~~~~~~~~~~  270 (427)
T 4f6c_A          201 -GTYFDIDTEDVTFSEADV--YKGQLLTSPYTRSKFYSELKVLEAVN-------NGLDGRIVRVGNLTSPYNGRWHMRNI  270 (427)
T ss_dssp             -GSEECSSCSCCEECTTCS--CSSCCCCSHHHHHHHHHHHHHHHHHH-------TTCCEEEEEECCEESCSSSCCCCTTG
T ss_pred             -CCCccCCCCCcccccccc--ccCCCCCCchHHHHHHHHHHHHHHHH-------cCCCEEEEeCCeeecCCCCCccccCc
Confidence             211100 00000100000  01133667899999999999988753       478999999999987764432     


Q ss_pred             --hhHHHHHHHHHH-HH--------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          284 --PSFLSLMAFTVL-KL--------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       284 --~~~~~~~~~~~~-~~--------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                        ............ .+        ...+.+++|+|++++.++..+.  .|..|...++.++.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~~s  331 (427)
T 4f6c_A          271 KTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNKMP  331 (427)
T ss_dssp             GGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC--CCSEEEESCSCCEE
T ss_pred             chHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC--CCCEEEecCCCCCc
Confidence              001111111000 00        1125678999999997665544  66777666666654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.86  E-value=1.7e-21  Score=176.46  Aligned_cols=201  Identities=18%  Similarity=0.145  Sum_probs=148.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+++||||+|+||++++++|+++|++|++++|+.++..           ..++.++.+|++|++++.++++         
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~---------   62 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK---------   62 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT---------
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc---------
Confidence            68999999999999999999999999999999875310           1357889999999888776543         


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                          ++|++|||||..      +.+.+++.+++|+.++..+++++.+.    + .++||++||...+...+....     
T Consensus        63 ----~~d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~~~~~~~~~~~-----  122 (267)
T 3ay3_A           63 ----DCDGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARNL----G-KPRIVFASSNHTIGYYPRTTR-----  122 (267)
T ss_dssp             ----TCSEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHHT----T-CCEEEEEEEGGGSTTSBTTSC-----
T ss_pred             ----CCCEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCCHHHhCCCCCCCC-----
Confidence                389999999975      23456889999999999999988642    2 479999999876633211100     


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchhHHHHHHHHHHHHhhCCC
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSFLSLMAFTVLKLLGLLQ  302 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~  302 (369)
                         ..+..+..+...|+.||++.+.+++.++.      ..++++++++||.+ .++....              ....+.
T Consensus       123 ---~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~------~~gi~~~~lrp~~v~~~~~~~~--------------~~~~~~  179 (267)
T 3ay3_A          123 ---IDTEVPRRPDSLYGLSKCFGEDLASLYYH------KFDIETLNIRIGSCFPKPKDAR--------------MMATWL  179 (267)
T ss_dssp             ---BCTTSCCCCCSHHHHHHHHHHHHHHHHHH------TTCCCEEEEEECBCSSSCCSHH--------------HHHHBC
T ss_pred             ---CCCCCCCCCCChHHHHHHHHHHHHHHHHH------HcCCCEEEEeceeecCCCCCCC--------------eeeccc
Confidence               11113344567899999999999998865      35799999999998 4543110              112357


Q ss_pred             CHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          303 SPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       303 ~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      +++|+|+.++.++..+....+.|+.
T Consensus       180 ~~~dva~~~~~~~~~~~~~~~~~~~  204 (267)
T 3ay3_A          180 SVDDFMRLMKRAFVAPKLGCTVVYG  204 (267)
T ss_dssp             CHHHHHHHHHHHHHSSCCCEEEEEE
T ss_pred             cHHHHHHHHHHHHhCCCCCceeEec
Confidence            9999999999876655432333433

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.86  E-value=9.2e-22  Score=222.82  Aligned_cols=175  Identities=17%  Similarity=0.186  Sum_probs=136.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCcchHH---HHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLS---ETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~~~~~---~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+|+++||||++|||+++|++|+++|++ |++++|+..+.+   +..+++...  +.++.++.||++|.++++++++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999996 889999876543   344444433  5689999999999999999999886


Q ss_pred             HHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +       +++||+||||||+.  .+..+++.+.|++++++|+.|++++.+.+.+.|.+.   |+||++||.++.     
T Consensus      1961 ~-------~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~---g~iV~iSS~ag~----- 2025 (2512)
T 2vz8_A         1961 Q-------LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL---DYFVIFSSVSCG----- 2025 (2512)
T ss_dssp             H-------HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC---CEEEEECCHHHH-----
T ss_pred             h-------cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC---CEEEEecchhhc-----
Confidence            4       37899999999986  345678999999999999999999999999988653   799999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  275 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v  275 (369)
                                     .+.++...|++||+++++|++.++.+       |+...++..|.+
T Consensus      2026 ---------------~g~~g~~~Y~aaKaal~~l~~~rr~~-------Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2026 ---------------RGNAGQANYGFANSAMERICEKRRHD-------GLPGLAVQWGAI 2063 (2512)
T ss_dssp             ---------------TTCTTCHHHHHHHHHHHHHHHHHHHT-------TSCCCEEEECCB
T ss_pred             ---------------CCCCCcHHHHHHHHHHHHHHHHHHHC-------CCcEEEEEccCc
Confidence                           67788899999999999999987754       444555555544

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.86  E-value=4.2e-20  Score=176.98  Aligned_cols=198  Identities=14%  Similarity=0.093  Sum_probs=138.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHH----------------HHHHHHhhcCCCcEEEEEecCC
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE----------------TMADITSRNKDARLEAFQVDLS  124 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~----------------~~~~~~~~~~~~~v~~~~~Dls  124 (369)
                      .++.+|+||||+|.||.+++++|+++|++|++++|+......                ...++.... ..++.++.+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCCC
Confidence            467899999999999999999999999999999987543211                111111111 346889999999


Q ss_pred             ChHHHHHHHHHHHHHHhccCCCCCccEEEeccccccCC-CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEE
Q 017580          125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN  203 (369)
Q Consensus       125 ~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~  203 (369)
                      |.+++.++++..           ++|+||||||..... ...+++.++..+++|+.|+..+++++.+.-   . ..+||+
T Consensus        88 d~~~~~~~~~~~-----------~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~-~~~~V~  152 (404)
T 1i24_A           88 DFEFLAESFKSF-----------EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---E-ECHLVK  152 (404)
T ss_dssp             SHHHHHHHHHHH-----------CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---T-TCEEEE
T ss_pred             CHHHHHHHHhcc-----------CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC---C-CcEEEE
Confidence            999888877643           499999999975321 123566677899999999999999986541   1 149999


Q ss_pred             EcCCcccccccccCCCccccccc----ccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          204 VTSFTHRNVFNAQVNNETITGKF----FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       204 vsS~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                      +||.+.+.....++..+.+....    .....+..+...|+.||++.+.+++.++.++      ++++++++||.|.++.
T Consensus       153 ~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------gi~~~ivrp~~v~Gp~  226 (404)
T 1i24_A          153 LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW------GIRATDLNQGVVYGVK  226 (404)
T ss_dssp             ECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECSC
T ss_pred             eCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc------CCeEEEEecceeeCCC
Confidence            99976653322111111000000    0000234456789999999999999998765      6899999999998875


Q ss_pred             c
Q 017580          280 M  280 (369)
Q Consensus       280 ~  280 (369)
                      .
T Consensus       227 ~  227 (404)
T 1i24_A          227 T  227 (404)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=3.3e-20  Score=176.16  Aligned_cols=251  Identities=10%  Similarity=0.037  Sum_probs=163.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch-----HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-----LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~-----~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++|+||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.+... ...++.++.+|++|.+++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            689999999999999999999999999999998643     22211111000 1346889999999999988877653  


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QV  217 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~  217 (369)
                               ++|+||||||....  ..+.++++..+++|+.++..+++++.+...+.  .++||++||...+..... ++
T Consensus       102 ---------~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~--~~~iv~~SS~~~~~~~~~~~~  168 (375)
T 1t2a_A          102 ---------KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSELYGKVQEIPQ  168 (375)
T ss_dssp             ---------CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGTCSCSSSSB
T ss_pred             ---------CCCEEEECCCcccc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCCc--cceEEEecchhhhCCCCCCCC
Confidence                     48999999997431  12346678899999999999999998765421  379999999876632211 11


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-ch-h-HHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VP-S-FLSLMAFTV  294 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~-~-~~~~~~~~~  294 (369)
                      +          +..+..+...|+.||++.+.+++.++.++      ++.+..+.|+.+..|.... .. . .........
T Consensus       169 ~----------E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~  232 (375)
T 1t2a_A          169 K----------ETTPFYPRSPYGAAKLYAYWIVVNFREAY------NLFAVNGILFNHESPRRGANFVTRKISRSVAKIY  232 (375)
T ss_dssp             C----------TTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHH
T ss_pred             C----------ccCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEecccccCCCCCCCcchHHHHHHHHHHH
Confidence            1          11334456789999999999999999876      4667777777665543221 11 0 001110000


Q ss_pred             HH--H---h------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          295 LK--L---L------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       295 ~~--~---~------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      ..  +   .      ..+..++|+|++++.++..+.  .|.|.. .++.++.          .+++.+...+.++.
T Consensus       233 ~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni-~~~~~~s----------~~e~~~~i~~~~g~  295 (375)
T 1t2a_A          233 LGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE--PEDFVI-ATGEVHS----------VREFVEKSFLHIGK  295 (375)
T ss_dssp             HTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS--CCCEEE-CCSCCEE----------HHHHHHHHHHHTTC
T ss_pred             cCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC--CceEEE-eCCCccc----------HHHHHHHHHHHhCC
Confidence            00  0   0      124579999999997765433  355544 4455544          34456666666654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.86  E-value=5.3e-21  Score=177.54  Aligned_cols=232  Identities=15%  Similarity=0.117  Sum_probs=144.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC-Ccch---HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHL---LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r-~~~~---~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ||+|+||||+|+||++++++|+++|++|++++| +.+.   .... .++...  ..++.++.+|++|.++++++++    
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGA--SEKLHFFNADLSNPDSFAAAIE----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTH--HHHEEECCCCTTCGGGGHHHHT----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-Hhhhcc--CCceEEEecCCCCHHHHHHHHc----
Confidence            578999999999999999999999999999998 6532   1111 111000  1357889999999998776553    


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCH-HhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc--
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTP-EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA--  215 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~-~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~--  215 (369)
                               .+|+|||+|+..    ..+. +..++.+++|+.|+.++++++.+..   + .++||++||.++....+.  
T Consensus        74 ---------~~d~vih~A~~~----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-~~~iV~~SS~~~~~~~~~~~  136 (322)
T 2p4h_X           74 ---------GCVGIFHTASPI----DFAVSEPEEIVTKRTVDGALGILKACVNSK---T-VKRFIYTSSGSAVSFNGKDK  136 (322)
T ss_dssp             ---------TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS---S-CCEEEEEEEGGGTSCSSSCC
T ss_pred             ---------CCCEEEEcCCcc----cCCCCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeccHHHcccCCCCC
Confidence                     379999999743    1222 2245689999999999999987652   1 479999999875532211  


Q ss_pred             -cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHH-HH
Q 017580          216 -QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLM-AF  292 (369)
Q Consensus       216 -~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~-~~  292 (369)
                       .++.+......+.. ...+....|+.||++.+.+++.++.+      .++++++++||.|.++.... .+...... ..
T Consensus       137 ~~~~e~~~~~~~~~~-~~~p~~~~Y~~sK~~~e~~~~~~~~~------~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~  209 (322)
T 2p4h_X          137 DVLDESDWSDVDLLR-SVKPFGWNYAVSKTLAEKAVLEFGEQ------NGIDVVTLILPFIVGRFVCPKLPDSIEKALVL  209 (322)
T ss_dssp             SEECTTCCCCHHHHH-HHCCTTHHHHHHHHHHHHHHHHHHHH------TTCCEEEEEECEEESCCCSSSCCHHHHHHTHH
T ss_pred             eecCCccccchhhhc-ccCcccccHHHHHHHHHHHHHHHHHh------cCCcEEEEcCCceECCCCCCCCCchHHHHHHH
Confidence             01110000000000 00011126999999888877766543      47999999999999987543 22111111 00


Q ss_pred             HHH--HHh--h--CCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017580          293 TVL--KLL--G--LLQSPEKGINSVLDAALAPPETSGVYF  326 (369)
Q Consensus       293 ~~~--~~~--~--~~~~~~e~A~~v~~~~l~~~~~sG~~~  326 (369)
                      ...  ...  .  .+.+++|+|++++.++.. +..+|.|.
T Consensus       210 ~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~g~~~  248 (322)
T 2p4h_X          210 VLGKKEQIGVTRFHMVHVDDVARAHIYLLEN-SVPGGRYN  248 (322)
T ss_dssp             HHSCGGGCCEEEEEEEEHHHHHHHHHHHHHS-CCCCEEEE
T ss_pred             HhCCCccCcCCCcCEEEHHHHHHHHHHHhhC-cCCCCCEE
Confidence            000  001  1  267999999999976644 33567754

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.86  E-value=9e-21  Score=180.47  Aligned_cols=250  Identities=12%  Similarity=-0.003  Sum_probs=165.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .++++|+||||+|+||++++++|+++|++|++++|+.+.....      .  ..++.++.+|++|.+++.++++      
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~------   92 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE------   92 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT------
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC------
Confidence            3568999999999999999999999999999999987543211      0  2357889999999988776543      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC-
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN-  219 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~-  219 (369)
                             ++|++||+||..... ..+.+.+++.+++|+.++..+++++...    + .++||++||...+......... 
T Consensus        93 -------~~d~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~~V~~SS~~v~~~~~~~~~~~  159 (379)
T 2c5a_A           93 -------GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARIN----G-IKRFFYASSACIYPEFKQLETTN  159 (379)
T ss_dssp             -------TCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEEEEGGGSCGGGSSSSSS
T ss_pred             -------CCCEEEECceecCcc-cccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeehheeCCCCCCCccC
Confidence                   489999999975321 1113557889999999999999988542    2 4699999997665322110000 


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hHHHHHHHHH-
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SFLSLMAFTV-  294 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----~~~~~~~~~~-  294 (369)
                      ..+....   ..+..+...|+.||++.+.+++.++.+.      ++++++++||.+.++......    .......... 
T Consensus       160 ~~~~E~~---~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  230 (379)
T 2c5a_A          160 VSLKESD---AWPAEPQDAFGLEKLATEELCKHYNKDF------GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQT  230 (379)
T ss_dssp             CEECGGG---GSSBCCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHH
T ss_pred             CCcCccc---CCCCCCCChhHHHHHHHHHHHHHHHHHH------CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHh
Confidence            0000000   0134456789999999999999998765      689999999999887643210    1111111110 


Q ss_pred             HHH----------hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          295 LKL----------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       295 ~~~----------~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      ..+          ...+.+++|+|++++.++..+  . |..|+..++.++.          .+++.+...+.++.
T Consensus       231 ~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~--~-~~~~ni~~~~~~s----------~~e~~~~i~~~~g~  292 (379)
T 2c5a_A          231 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--F-REPVNIGSDEMVS----------MNEMAEMVLSFEEK  292 (379)
T ss_dssp             CSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS--C-CSCEEECCCCCEE----------HHHHHHHHHHTTTC
T ss_pred             CCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc--C-CCeEEeCCCCccC----------HHHHHHHHHHHhCC
Confidence            001          112456999999999766543  2 3344545555544          34456666666654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.86  E-value=1.5e-20  Score=173.84  Aligned_cols=241  Identities=12%  Similarity=0.012  Sum_probs=161.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||++++++|+++|++|++++|+.+...+   .+     ..++.++.+|++|.+++.+++++         
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dl~~~~~~~~~~~~---------   64 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-----PKGVPFFRVDLRDKEGVERAFRE---------   64 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-----CTTCCEECCCTTCHHHHHHHHHH---------
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-----ccCeEEEECCCCCHHHHHHHHHh---------
Confidence            59999999999999999999999999999985432110   01     13567889999999998887663         


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC-cccccccccCCCcccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF-THRNVFNAQVNNETIT  223 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~-~~~~~~~~~~~~~~~~  223 (369)
                        .++|++||+||....  ..+.++++..+++|+.++..+++++...    + .++||++||. ..+.......+     
T Consensus        65 --~~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~----~-~~~iv~~SS~~~~~g~~~~~~~-----  130 (311)
T 2p5y_A           65 --FRPTHVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQY----G-VEKLVFASTGGAIYGEVPEGER-----  130 (311)
T ss_dssp             --HCCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEHHHHHCCCCTTCC-----
T ss_pred             --cCCCEEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCCChhhcCCCCCCCC-----
Confidence              248999999997431  1234667889999999999999987532    2 4799999997 32211000000     


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--hHHH-HHHHHH-HHH--
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--SFLS-LMAFTV-LKL--  297 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~--~~~~-~~~~~~-~~~--  297 (369)
                         ..+..+..+...|+.||++.+.+++.++.++      ++++++++||.+.+|......  .... ...... ..+  
T Consensus       131 ---~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  201 (311)
T 2p5y_A          131 ---AEETWPPRPKSPYAASKAAFEHYLSVYGQSY------GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVT  201 (311)
T ss_dssp             ---BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEE
T ss_pred             ---cCCCCCCCCCChHHHHHHHHHHHHHHHHHHc------CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcE
Confidence               0011233456789999999999999998875      588999999999988653221  1111 111100 001  


Q ss_pred             -h-----------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          298 -L-----------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       298 -~-----------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                       .           ..+.+++|+|++++.++..+    |..|..++|.+..          .+++.+...+.++.
T Consensus       202 ~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~----~~~~~i~~~~~~s----------~~e~~~~i~~~~g~  261 (311)
T 2p5y_A          202 LYARKTPGDEGCVRDYVYVGDVAEAHALALFSL----EGIYNVGTGEGHT----------TREVLMAVAEAAGK  261 (311)
T ss_dssp             EECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC----CEEEEESCSCCEE----------HHHHHHHHHHHHTC
T ss_pred             EEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC----CCEEEeCCCCCcc----------HHHHHHHHHHHhCC
Confidence             0           12356899999999766442    5666666666554          34455555555554

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.85  E-value=8.9e-21  Score=177.33  Aligned_cols=244  Identities=14%  Similarity=0.056  Sum_probs=164.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC---C---CEEEEEeCCcch--HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSRE---G---FHVVLVGRSSHL--LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~---G---~~Vvl~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +++||||+|+||++++++|+++   |   ++|++++|+...  .+.+ +.+   ....++.++.+|++|.+++.+++   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~~~~~~~---   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APV---DADPRLRFVHGDIRDAGLLAREL---   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGG---TTCTTEEEEECCTTCHHHHHHHT---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhc---ccCCCeEEEEcCCCCHHHHHHHh---
Confidence            5999999999999999999997   8   999999986421  1111 111   11357899999999998776654   


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                                .++|++||+||....  +.+.+++++.+++|+.++..+++++.+..     .++||++||.+.+..... 
T Consensus        75 ----------~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-----~~~~v~~SS~~vyg~~~~-  136 (337)
T 1r6d_A           75 ----------RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDAG-----VGRVVHVSTNQVYGSIDS-  136 (337)
T ss_dssp             ----------TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHTT-----CCEEEEEEEGGGGCCCSS-
T ss_pred             ----------cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEecchHHhCCCCC-
Confidence                      359999999997531  12345667899999999999999987652     369999999876532110 


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-  295 (369)
                         .     ...+..+..+...|+.||++.+.+++.++.++      ++++++++||.+.++................. 
T Consensus       137 ---~-----~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~  202 (337)
T 1r6d_A          137 ---G-----SWTESSPLEPNSPYAASKAGSDLVARAYHRTY------GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDG  202 (337)
T ss_dssp             ---S-----CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTT
T ss_pred             ---C-----CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH------CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcC
Confidence               0     01111344556789999999999999998875      57899999999998875321111111111000 


Q ss_pred             HHh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          296 KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       296 ~~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      .+.         ..+.+++|+|++++.++..+  ..|+.|..+++.+..          .+++.+...+.++.
T Consensus       203 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~g~~~~v~~~~~~s----------~~e~~~~i~~~~g~  263 (337)
T 1r6d_A          203 GTLPLYGDGANVREWVHTDDHCRGIALVLAGG--RAGEIYHIGGGLELT----------NRELTGILLDSLGA  263 (337)
T ss_dssp             CCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCCCEEE----------HHHHHHHHHHHHTC
T ss_pred             CCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC--CCCCEEEeCCCCCcc----------HHHHHHHHHHHhCC
Confidence            000         12457899999999766433  356677767666654          33455555555554

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.85  E-value=2e-20  Score=177.90  Aligned_cols=249  Identities=13%  Similarity=0.022  Sum_probs=163.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++++|+||||+|+||.+++++|+++| ++|++++|+.+...+.   +.   ...++.++.+|++|++++.++      
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~---~~~~v~~~~~Dl~d~~~l~~~------   96 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP---DHPAVRFSETSITDDALLASL------   96 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC---CCTTEEEECSCTTCHHHHHHC------
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc---CCCceEEEECCCCCHHHHHHH------
Confidence            4678899999999999999999999999 9999999986532111   10   135788999999998776543      


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QV  217 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~  217 (369)
                             ..++|+|||+||....  ..+.+..++.+++|+.++..+++++..    ..+.++||++||...+..... ++
T Consensus        97 -------~~~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~  163 (377)
T 2q1s_A           97 -------QDEYDYVFHLATYHGN--QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDA  163 (377)
T ss_dssp             -------CSCCSEEEECCCCSCH--HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC-----------
T ss_pred             -------hhCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCc
Confidence                   2369999999997532  123456788999999999999988743    201469999999765532111 11


Q ss_pred             C--CcccccccccccCCC-chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc---------cc---
Q 017580          218 N--NETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM---------RE---  282 (369)
Q Consensus       218 ~--~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~---------~~---  282 (369)
                      .  .+.. +      .+. .+...|+.||++.+.+++.++.++      ++++++++||.+.++..         ..   
T Consensus       164 ~~~E~~~-~------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~  230 (377)
T 2q1s_A          164 KATEETD-I------VSLHNNDSPYSMSKIFGEFYSVYYHKQH------QLPTVRARFQNVYGPGEILGAGRWRGTPATV  230 (377)
T ss_dssp             ---CCCC-C------CCSSCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTCCTTCSSCCSSGGGT
T ss_pred             Ccccccc-c------ccccCCCCchHHHHHHHHHHHHHHHHHh------CCCEEEEeeccEECCCCcccccccccCcccc
Confidence            1  1100 0      033 446789999999999999998765      68899999999988765         21   


Q ss_pred             -chhHHHHHHHHH-HHHh---------hCCCCHHHHHHH-HHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHH
Q 017580          283 -VPSFLSLMAFTV-LKLL---------GLLQSPEKGINS-VLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELW  350 (369)
Q Consensus       283 -~~~~~~~~~~~~-~~~~---------~~~~~~~e~A~~-v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw  350 (369)
                       ............ ..+.         ..+..++|+|++ ++.++..+.  .| .|...+++++.          .+++.
T Consensus       231 ~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~~~s----------~~e~~  297 (377)
T 2q1s_A          231 WRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP--GG-VYNIASGKETS----------IADLA  297 (377)
T ss_dssp             SCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCCCEE----------HHHHH
T ss_pred             cccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCCcee----------HHHHH
Confidence             011111111000 0011         123458999999 887665543  67 66666666554          44566


Q ss_pred             HHHHHhhhc
Q 017580          351 TTSCNLFIN  359 (369)
Q Consensus       351 ~~~~~~~~~  359 (369)
                      +...+.++.
T Consensus       298 ~~i~~~~g~  306 (377)
T 2q1s_A          298 TKINEITGN  306 (377)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHhCC
Confidence            666666654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=6.2e-20  Score=171.35  Aligned_cols=248  Identities=11%  Similarity=-0.005  Sum_probs=163.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHH-HHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~-~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++|+||||+|+||.+++++|+++|++|++++|+.+... ...+.+   ....++.++.+|++|.+++.++++.+     
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   85 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKA-----   85 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc---cccCceEEEECCCCCHHHHHHHHHHc-----
Confidence            578999999999999999999999999999999875421 111111   11346889999999999988877643     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNE  220 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~  220 (369)
                            ++|++||+||....  ..+.++.+..+++|+.++..+++++.+.    +..++||++||...+..... +++  
T Consensus        86 ------~~d~Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~--  151 (335)
T 1rpn_A           86 ------QPQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQD--  151 (335)
T ss_dssp             ------CCSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBC--
T ss_pred             ------CCCEEEECccccch--hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCC--
Confidence                  48999999997431  1123456789999999999999988654    10269999999776533211 111  


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh-
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-  299 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-  299 (369)
                              +..+..+...|+.||++.+.+++.++.++      ++.+.++.|+.+..+....................+ 
T Consensus       152 --------E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~  217 (335)
T 1rpn_A          152 --------ENTPFYPRSPYGVAKLYGHWITVNYRESF------GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGK  217 (335)
T ss_dssp             --------TTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTS
T ss_pred             --------cccCCCCCChhHHHHHHHHHHHHHHHHHc------CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCC
Confidence                    11334456689999999999999998776      466777888887665432211000000000000001 


Q ss_pred             -------------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          300 -------------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       300 -------------~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                                   .+..++|+|++++.++..+.  .+.| +..++.++.          .+++.+...+.++.
T Consensus       218 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--~~~~-ni~~~~~~s----------~~e~~~~i~~~~g~  277 (335)
T 1rpn_A          218 QQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADDY-VVATGVTTT----------VRDMCQIAFEHVGL  277 (335)
T ss_dssp             CSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CCCE-EECCSCEEE----------HHHHHHHHHHTTTC
T ss_pred             CceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--CCEE-EEeCCCCcc----------HHHHHHHHHHHhCC
Confidence                         13567999999997765433  3444 444555554          33455555555544

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.85  E-value=3.2e-21  Score=167.20  Aligned_cols=202  Identities=14%  Similarity=0.017  Sum_probs=142.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +++++||||+|+||++++++|+++|++|++++|++++.+..        ...++.++.+|++|++++.++++        
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~--------   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA--------   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT--------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc--------
Confidence            47899999999999999999999999999999997653211        13468899999999988766543        


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                           .+|++|||||.....   +      ..++|+.++..+++++.+.    + .++||++||...+....        
T Consensus        67 -----~~d~vi~~a~~~~~~---~------~~~~n~~~~~~~~~~~~~~----~-~~~~v~~Ss~~~~~~~~--------  119 (206)
T 1hdo_A           67 -----GQDAVIVLLGTRNDL---S------PTTVMSEGARNIVAAMKAH----G-VDKVVACTSAFLLWDPT--------  119 (206)
T ss_dssp             -----TCSEEEECCCCTTCC---S------CCCHHHHHHHHHHHHHHHH----T-CCEEEEECCGGGTSCTT--------
T ss_pred             -----CCCEEEECccCCCCC---C------ccchHHHHHHHHHHHHHHh----C-CCeEEEEeeeeeccCcc--------
Confidence                 379999999975431   1      1248888888888876543    2 46999999986551100        


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchhHHHHHHHHHHHHhhCC
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSFLSLMAFTVLKLLGLL  301 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~  301 (369)
                              ....+...|+.+|++++.+++          ..++++++++||.+ .++..........      ..+.+.+
T Consensus       120 --------~~~~~~~~y~~~K~~~e~~~~----------~~~i~~~~lrp~~~~~~~~~~~~~~~~~------~~~~~~~  175 (206)
T 1hdo_A          120 --------KVPPRLQAVTDDHIRMHKVLR----------ESGLKYVAVMPPHIGDQPLTGAYTVTLD------GRGPSRV  175 (206)
T ss_dssp             --------CSCGGGHHHHHHHHHHHHHHH----------HTCSEEEEECCSEEECCCCCSCCEEESS------SCSSCSE
T ss_pred             --------cccccchhHHHHHHHHHHHHH----------hCCCCEEEEeCCcccCCCCCcceEeccc------CCCCCCc
Confidence                    001156789999999988873          24789999999998 4443322211000      0010356


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          302 QSPEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       302 ~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                      .+++|+|+.+++++..+ ...|+.|..++|.
T Consensus       176 i~~~Dva~~~~~~~~~~-~~~g~~~~i~~g~  205 (206)
T 1hdo_A          176 ISKHDLGHFMLRCLTTD-EYDGHSTYPSHQY  205 (206)
T ss_dssp             EEHHHHHHHHHHTTSCS-TTTTCEEEEECCC
T ss_pred             cCHHHHHHHHHHHhcCc-cccccceeeeccc
Confidence            79999999999765443 4567777666553

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.85  E-value=2.1e-21  Score=172.75  Aligned_cols=203  Identities=8%  Similarity=0.015  Sum_probs=133.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ..|+|+||||+||||++++++|+++| ++|++++|+++++++.        ...++.++.+|++|+++++++++      
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~------   87 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ------   87 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT------
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc------
Confidence            45799999999999999999999999 8999999998754321        13478999999999998877654      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                             .+|+||||||...         +           ...++.+++.|++.+ .++||++||..++...+......
T Consensus        88 -------~~D~vv~~a~~~~---------~-----------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~  139 (236)
T 3qvo_A           88 -------GQDIVYANLTGED---------L-----------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEW  139 (236)
T ss_dssp             -------TCSEEEEECCSTT---------H-----------HHHHHHHHHHHHHTT-CCEEEEECCCCC-----------
T ss_pred             -------CCCEEEEcCCCCc---------h-----------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccc
Confidence                   3799999998521         0           123567888887765 68999999988763221110000


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhC
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  300 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  300 (369)
                             ...........|..+|.++           .   ..+|++++|+||++.|+...........     ....++
T Consensus       140 -------~~~~~~~~~~~~~~~~~~l-----------~---~~gi~~~~vrPg~i~~~~~~~~~~~~~~-----~~~~~~  193 (236)
T 3qvo_A          140 -------NNAVIGEPLKPFRRAADAI-----------E---ASGLEYTILRPAWLTDEDIIDYELTSRN-----EPFKGT  193 (236)
T ss_dssp             ------------CGGGHHHHHHHHHH-----------H---TSCSEEEEEEECEEECCSCCCCEEECTT-----SCCSCS
T ss_pred             -------hhhcccchHHHHHHHHHHH-----------H---HCCCCEEEEeCCcccCCCCcceEEeccC-----CCCCCc
Confidence                   0001223344555554322           2   5789999999999988764432110000     001235


Q ss_pred             CCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017580          301 LQSPEKGINSVLDAALAPPETSGVYFFGGKGR  332 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~  332 (369)
                      +.+++|+|+.+++++..+....|+.|...++.
T Consensus       194 ~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          194 IVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             EEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             EECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence            67999999999988776663446666555443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.85  E-value=6.3e-21  Score=176.68  Aligned_cols=237  Identities=14%  Similarity=0.021  Sum_probs=130.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +++|+||||+|+||++++++|+++|++|++++|+.+.            +  +  ++.+|++|.+++.++++..      
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~--~--~~~~Dl~d~~~~~~~~~~~------   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P--K--FEQVNLLDSNAVHHIIHDF------   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH------
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C--C--eEEecCCCHHHHHHHHHhh------
Confidence            5789999999999999999999999999999987542            1  1  6789999998888776643      


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                           ++|++||+||....  ..+.+.+++.+++|+.++..+++++.+.      +++||++||...+.....++.+   
T Consensus        60 -----~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v~~~~~~~~~E---  123 (315)
T 2ydy_A           60 -----QPHVIVHCAAERRP--DVVENQPDAASQLNVDASGNLAKEAAAV------GAFLIYISSDYVFDGTNPPYRE---  123 (315)
T ss_dssp             -----CCSEEEECC---------------------CHHHHHHHHHHHHH------TCEEEEEEEGGGSCSSSCSBCT---
T ss_pred             -----CCCEEEECCcccCh--hhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHHHcCCCCCCCCC---
Confidence                 48999999997542  2345677889999999999999998763      2599999998876331111111   


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH-HHH-----HH
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-FTV-----LK  296 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~-----~~  296 (369)
                             ..+..+...|+.||++.+.+++.++.+     -..+|++.|. |...++...-......... ...     ..
T Consensus       124 -------~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (315)
T 2ydy_A          124 -------EDIPAPLNLYGKTKLDGEKAVLENNLG-----AAVLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHW  190 (315)
T ss_dssp             -------TSCCCCCSHHHHHHHHHHHHHHHHCTT-----CEEEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECS
T ss_pred             -------CCCCCCcCHHHHHHHHHHHHHHHhCCC-----eEEEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccC
Confidence                   133445678999999999999887432     1234444444 3333311000111111000 000     00


Q ss_pred             HhhCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          297 LLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~~--~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      ....+.+++|+|++++.++...  ....|..|...++.++.          .+++.+...+.++..
T Consensus       191 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s----------~~e~~~~i~~~~g~~  246 (315)
T 2ydy_A          191 QQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMT----------KYEMACAIADAFNLP  246 (315)
T ss_dssp             SBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBC----------HHHHHHHHHHHTTCC
T ss_pred             ceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCccc----------HHHHHHHHHHHhCCC
Confidence            1224568999999999766542  12345666666666654          444666666666554

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.84  E-value=1.8e-20  Score=176.71  Aligned_cols=246  Identities=13%  Similarity=0.071  Sum_probs=162.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++++++|+||||+|+||.+++++|+++| ++|++++|+.....  ...+    .+  +. +.+|+++.++++++++.  
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~~--~~-~~~d~~~~~~~~~~~~~--  110 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----VD--LN-IADYMDKEDFLIQIMAG--  110 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----TT--SC-CSEEEEHHHHHHHHHTT--
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----cC--ce-EeeecCcHHHHHHHHhh--
Confidence            34667899999999999999999999999 89999999865421  0111    11  22 67899998877766542  


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-c
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-Q  216 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~  216 (369)
                      .      .++++|++||+||....    +.+.+++.+++|+.++..+++++.+.    + . +||++||...+..... .
T Consensus       111 ~------~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~-r~V~~SS~~v~g~~~~~~  174 (357)
T 2x6t_A          111 E------EFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDF  174 (357)
T ss_dssp             C------CCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGCSCSSCC
T ss_pred             c------ccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEcchHHhCCCCCCC
Confidence            0      34579999999997643    34457889999999999999998763    2 4 9999999876532211 1


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc---hhH-HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV---PSF-LSLMAF  292 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~---~~~-~~~~~~  292 (369)
                      ++++          .+..+...|+.||++.+.+++.++.+      .++++++++||.+.++.....   ... ......
T Consensus       175 ~~E~----------~~~~p~~~Y~~sK~~~E~~~~~~~~~------~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~  238 (357)
T 2x6t_A          175 IESR----------EYEKPLNVFGYSKFLFDEYVRQILPE------ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQ  238 (357)
T ss_dssp             CSSG----------GGCCCSSHHHHHHHHHHHHHHHHGGG------CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHH
T ss_pred             cCCc----------CCCCCCChhHHHHHHHHHHHHHHHHH------cCCCEEEEecCeEECCCCCCCcccchHHHHHHHH
Confidence            1111          23334568999999999999988764      368899999999987754311   011 111110


Q ss_pred             HHH----------HH-hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          293 TVL----------KL-LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       293 ~~~----------~~-~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      ...          .. ...+.+++|+|++++.++....   |..|...++.++.          .+++.+...+.++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---~~~~~i~~~~~~s----------~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          239 LNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAES----------FQAVADATLAYHKKG  304 (357)
T ss_dssp             HHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCEE----------HHHHHHHHHHHHTCC
T ss_pred             HHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEecCCCccc----------HHHHHHHHHHHcCCC
Confidence            000          01 1234689999999997665443   5566666666554          344566666666543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=1.5e-21  Score=172.19  Aligned_cols=218  Identities=14%  Similarity=0.013  Sum_probs=149.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++++||||+|+||++++++|+++|++|++++|++++.+..         ..++.++.+|++|.+++.++++         
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~---------   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK---------   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT---------
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc---------
Confidence            6899999999999999999999999999999997654221         2578999999999998776654         


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                          ++|++||+||....        ..+.+++|+.++..+++++.+.    + .+++|++||..+....+.....    
T Consensus        67 ----~~d~vi~~a~~~~~--------~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~----  125 (227)
T 3dhn_A           67 ----GADAVISAFNPGWN--------NPDIYDETIKVYLTIIDGVKKA----G-VNRFLMVGGAGSLFIAPGLRLM----  125 (227)
T ss_dssp             ----TCSEEEECCCC--------------CCSHHHHHHHHHHHHHHHT----T-CSEEEEECCSTTSEEETTEEGG----
T ss_pred             ----CCCEEEEeCcCCCC--------ChhHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCChhhccCCCCCccc----
Confidence                38999999986421        1237899999999888887543    2 4699999998766432211111    


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCC
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS  303 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (369)
                            ..+..+...|+.||++.+.+.+.+++      ..++++++++||.+.++......................+.+
T Consensus       126 ------~~~~~p~~~Y~~sK~~~e~~~~~~~~------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~  193 (227)
T 3dhn_A          126 ------DSGEVPENILPGVKALGEFYLNFLMK------EKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHIS  193 (227)
T ss_dssp             ------GTTCSCGGGHHHHHHHHHHHHHTGGG------CCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEE
T ss_pred             ------cCCcchHHHHHHHHHHHHHHHHHHhh------ccCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEe
Confidence                  13334567899999999988887765      358999999999997664321100000000000000013568


Q ss_pred             HHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017580          304 PEKGINSVLDAALAPPETSGVYFFGGKGRT  333 (369)
Q Consensus       304 ~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~  333 (369)
                      ++|+|++++.++..++ ..|+.|...+.++
T Consensus       194 ~~Dva~ai~~~l~~~~-~~g~~~~~~~~~~  222 (227)
T 3dhn_A          194 VEDYAAAMIDELEHPK-HHQERFTIGYLEH  222 (227)
T ss_dssp             HHHHHHHHHHHHHSCC-CCSEEEEEECCSC
T ss_pred             HHHHHHHHHHHHhCcc-ccCcEEEEEeehh
Confidence            9999999998766554 4566655444333

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.84  E-value=1.5e-19  Score=168.35  Aligned_cols=244  Identities=12%  Similarity=0.071  Sum_probs=164.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++|+||||+|+||.+++++|+++|++|++++|+.....   +.+     ..++.++.+|++|.+++.+++++        
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~~~~~~~~--------   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI-----TEGAKFYNGDLRDKAFLRDVFTQ--------   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS-----CTTSEEEECCTTCHHHHHHHHHH--------
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc-----CCCcEEEECCCCCHHHHHHHHhh--------
Confidence            47999999999999999999999999999999764322   111     22678999999999988777653        


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNETI  222 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~~~  222 (369)
                         .++|++||+||.....  .+.+..++.+++|+.++..+++++..    .+ .+++|++||...+.... .+++    
T Consensus        66 ---~~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~----  131 (330)
T 2c20_A           66 ---ENIEAVMHFAADSLVG--VSMEKPLQYYNNNVYGALCLLEVMDE----FK-VDKFIFSSTAATYGEVDVDLIT----  131 (330)
T ss_dssp             ---SCEEEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGGCSCSSSSBC----
T ss_pred             ---cCCCEEEECCcccCcc--ccccCHHHHHHHHhHHHHHHHHHHHH----cC-CCEEEEeCCceeeCCCCCCCCC----
Confidence               3699999999975321  13456788999999999999988643    22 47999999977653211 1111    


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc--------chhHHHHHHHHH
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE--------VPSFLSLMAFTV  294 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~  294 (369)
                            +..+..+...|+.||++.+.+++.++.+      .++++++++||.+.++....        ............
T Consensus       132 ------E~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~  199 (330)
T 2c20_A          132 ------EETMTNPTNTYGETKLAIEKMLHWYSQA------SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVA  199 (330)
T ss_dssp             ------TTSCCCCSSHHHHHHHHHHHHHHHHHHT------SSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHH
T ss_pred             ------cCCCCCCCChHHHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHH
Confidence                  1133445678999999999999998865      37899999999998764210        011111110000


Q ss_pred             H---HHh---------------hCCCCHHHHHHHHHHHhcCCCC-CcccEEeCCCCccccCCcccCCHHHHHHHHHHHHH
Q 017580          295 L---KLL---------------GLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCN  355 (369)
Q Consensus       295 ~---~~~---------------~~~~~~~e~A~~v~~~~l~~~~-~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~  355 (369)
                      .   .++               ..+..++|+|++++.++..... ..|..|...++.+..          .+++.+...+
T Consensus       200 ~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s----------~~e~~~~i~~  269 (330)
T 2c20_A          200 LGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFS----------VKEIVDAVRE  269 (330)
T ss_dssp             TTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBC----------HHHHHHHHHH
T ss_pred             hhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCcc----------HHHHHHHHHH
Confidence            0   000               0234689999999976644322 235566666665554          3445666666


Q ss_pred             hhhc
Q 017580          356 LFIN  359 (369)
Q Consensus       356 ~~~~  359 (369)
                      .++.
T Consensus       270 ~~g~  273 (330)
T 2c20_A          270 VTNH  273 (330)
T ss_dssp             HTTS
T ss_pred             HhCC
Confidence            6654

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.83  E-value=6.6e-19  Score=162.86  Aligned_cols=234  Identities=16%  Similarity=0.067  Sum_probs=161.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +++|+||||+|+||.+++++|+++|++|++++|+....+     +     . ++.++.+|++ .+++.++++        
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~-----~-~~~~~~~Dl~-~~~~~~~~~--------   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I-----N-DYEYRVSDYT-LEDLINQLN--------   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT--------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C-----C-ceEEEEcccc-HHHHHHhhc--------
Confidence            368999999999999999999999999999999944322     1     1 6789999999 887765443        


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCcc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNET  221 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~~  221 (369)
                           ++|++||+||.....      ..++.+++|+.++..+++++...    + .+++|++||...+.... .++.   
T Consensus        62 -----~~d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~~----~-~~r~v~~SS~~vyg~~~~~~~~---  122 (311)
T 3m2p_A           62 -----DVDAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYEN----N-ISNIVYASTISAYSDETSLPWN---  122 (311)
T ss_dssp             -----TCSEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGCCCGGGCSBC---
T ss_pred             -----CCCEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEccHHHhCCCCCCCCC---
Confidence                 599999999986432      45678999999999998887442    2 46899999976553221 1111   


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-HHHh--
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-LKLL--  298 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~--  298 (369)
                             +..+..+...|+.||.+.+.+++.++.+      .+++++++.||.+.++................ ..+.  
T Consensus       123 -------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  189 (311)
T 3m2p_A          123 -------EKELPLPDLMYGVSKLACEHIGNIYSRK------KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTL  189 (311)
T ss_dssp             -------TTSCCCCSSHHHHHHHHHHHHHHHHHHH------SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEE
T ss_pred             -------CCCCCCCCchhHHHHHHHHHHHHHHHHH------cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEE
Confidence                   1134455678999999999999998875      47899999999998876542211111111100 0000  


Q ss_pred             -------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          299 -------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       299 -------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                             ..+..++|+|++++.++..+.  .|..|...++++..          .+++++...+.++..
T Consensus       190 ~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~~i~~~~~~s----------~~e~~~~i~~~~g~~  246 (311)
T 3m2p_A          190 HANSVAKREFLYAKDAAKSVIYALKQEK--VSGTFNIGSGDALT----------NYEVANTINNAFGNK  246 (311)
T ss_dssp             SSBCCCCEEEEEHHHHHHHHHHHTTCTT--CCEEEEECCSCEEC----------HHHHHHHHHHHTTCT
T ss_pred             ecCCCeEEceEEHHHHHHHHHHHHhcCC--CCCeEEeCCCCccc----------HHHHHHHHHHHhCCC
Confidence                   023568899999996654433  56666666666664          455666677666653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.83  E-value=2.8e-19  Score=169.47  Aligned_cols=254  Identities=10%  Similarity=0.098  Sum_probs=167.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCC-ChHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS-SFQSVLKFKDS  135 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls-~~~~i~~~~~~  135 (369)
                      +..+++++|+||||+|+||.+++++|+++ |++|++++|+.++.....       ...++.++.+|++ +.+++.++++ 
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~~d~~~~~~~~~-   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-------KHERMHFFEGDITINKEWVEYHVK-   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-------GSTTEEEEECCTTTCHHHHHHHHH-
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-------cCCCeEEEeCccCCCHHHHHHHhc-
Confidence            34567899999999999999999999999 999999999876543321       1357899999999 8888877665 


Q ss_pred             HHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                        .          +|+|||+||...+.  ...+..++.+++|+.++..+++++...    +  .++|++||...+.....
T Consensus        91 --~----------~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~----~--~~~v~~SS~~vyg~~~~  150 (372)
T 3slg_A           91 --K----------CDVILPLVAIATPA--TYVKQPLRVFELDFEANLPIVRSAVKY----G--KHLVFPSTSEVYGMCAD  150 (372)
T ss_dssp             --H----------CSEEEECBCCCCHH--HHHHCHHHHHHHHTTTTHHHHHHHHHH----T--CEEEEECCGGGGBSCCC
T ss_pred             --c----------CCEEEEcCccccHH--HHhhCHHHHHHHHHHHHHHHHHHHHHh----C--CcEEEeCcHHHhCCCCC
Confidence              2          89999999975321  123456678999999999998887544    2  69999999665532211


Q ss_pred             -cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHH
Q 017580          216 -QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFL  287 (369)
Q Consensus       216 -~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-------~~~~  287 (369)
                       ++..+....   .......+...|+.||.+.+.+++.++.      . ++++++++|+.+..+.....       ....
T Consensus       151 ~~~~e~~~~~---~~~p~~~p~~~Y~~sK~~~E~~~~~~~~------~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~  220 (372)
T 3slg_A          151 EQFDPDASAL---TYGPINKPRWIYACSKQLMDRVIWGYGM------E-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVV  220 (372)
T ss_dssp             SSBCTTTCCE---EECCTTCTTHHHHHHHHHHHHHHHHHHT------T-TCEEEEEEECSEECSSCCCTTCSBSCSCHHH
T ss_pred             CCCCcccccc---ccCCCCCCCCcHHHHHHHHHHHHHHHHH------C-CCCEEEEccccccCCCcccccccccccchHH
Confidence             111110000   0001114566899999999999888874      3 78999999999987754320       0111


Q ss_pred             -HHHHHHHH-HHh---h------CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCC-CccccCCcccCCHHHHHHHHHHHH
Q 017580          288 -SLMAFTVL-KLL---G------LLQSPEKGINSVLDAALAPP-ETSGVYFFGGK-GRTVNSSALSFNSKLAGELWTTSC  354 (369)
Q Consensus       288 -~~~~~~~~-~~~---~------~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~-g~~~~~~~~~~d~~~~~~lw~~~~  354 (369)
                       ........ .+.   +      .+..++|+|++++.++..+. ...|..|...+ +++..          .+++++...
T Consensus       221 ~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s----------~~e~~~~i~  290 (372)
T 3slg_A          221 TQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFS----------VRELANKML  290 (372)
T ss_dssp             HHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEE----------HHHHHHHHH
T ss_pred             HHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCcc----------HHHHHHHHH
Confidence             11111100 000   0      24578999999997766543 24567776666 45665          444566666


Q ss_pred             Hhhhc
Q 017580          355 NLFIN  359 (369)
Q Consensus       355 ~~~~~  359 (369)
                      +.++.
T Consensus       291 ~~~g~  295 (372)
T 3slg_A          291 ELAAE  295 (372)
T ss_dssp             HHHHH
T ss_pred             HHhCC
Confidence            66654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.83  E-value=1.7e-20  Score=175.53  Aligned_cols=233  Identities=17%  Similarity=0.178  Sum_probs=146.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH--HHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET--MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~--~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+||||+|+||++++++|+++|++|+++.|+.+..+..  ...+. .  ..++.++.+|++|.+++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc------
Confidence            68999999999999999999999999999999986543211  12222 1  2468889999999888766543      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-----
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-----  215 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-----  215 (369)
                             .+|++||+||.... .  ..+..++.+++|+.|+..+++++.+..   + .+|||++||.++....+.     
T Consensus        80 -------~~D~Vih~A~~~~~-~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~r~V~~SS~~~~~~~~~~~~~~  145 (338)
T 2rh8_A           80 -------GCDFVFHVATPVHF-A--SEDPENDMIKPAIQGVVNVMKACTRAK---S-VKRVILTSSAAAVTINQLDGTGL  145 (338)
T ss_dssp             -------TCSEEEEESSCCCC------------CHHHHHHHHHHHHHHHHCT---T-CCEEEEECCHHHHHHHHHTCSCC
T ss_pred             -------CCCEEEEeCCccCC-C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-cCEEEEEecHHHeecCCcCCCCc
Confidence                   37999999986421 1  112234589999999999999887642   1 369999999875422111     


Q ss_pred             cCCCcccccccccccCCC-chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHH---
Q 017580          216 QVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLM---  290 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~---  290 (369)
                      .++++........  .+. +....|+.||++.+.+++.++++.      ++++++++||.|.+|.... .+......   
T Consensus       146 ~~~E~~~~~~~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~  217 (338)
T 2rh8_A          146 VVDEKNWTDIEFL--TSAKPPTWGYPASKTLAEKAAWKFAEEN------NIDLITVIPTLMAGSSLTSDVPSSIGLAMSL  217 (338)
T ss_dssp             CCCTTTTTCC---------CCCCCCTTSCCHHHHHHHHHHHHH------TCCEEEEEECEEESCCSSSSCCHHHHHHHHH
T ss_pred             ccChhhccchhhc--cccCCccchHHHHHHHHHHHHHHHHHHc------CCcEEEEeCCceECCCCCCCCCchHHHHHHH
Confidence            1111110000000  000 111269999999999888877543      6889999999999986543 12111100   


Q ss_pred             -----HHHH-HH----Hhh--CCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          291 -----AFTV-LK----LLG--LLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       291 -----~~~~-~~----~~~--~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                           .... ..    +.+  .+.+++|+|++++.++.. +...|.|+.
T Consensus       218 ~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~  265 (338)
T 2rh8_A          218 ITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEK-ESASGRYIC  265 (338)
T ss_dssp             HHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHC-TTCCEEEEE
T ss_pred             HcCCccccccccccccccCcccEEEHHHHHHHHHHHHcC-CCcCCcEEE
Confidence                 0000 00    111  367999999999976543 344566654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=5.1e-19  Score=173.41  Aligned_cols=242  Identities=13%  Similarity=0.081  Sum_probs=155.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC---CCEEEEEeCCcchHHHHHHHHHhhcC--------------CCcEEEEEec
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSRE---GFHVVLVGRSSHLLSETMADITSRNK--------------DARLEAFQVD  122 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~---G~~Vvl~~r~~~~~~~~~~~~~~~~~--------------~~~v~~~~~D  122 (369)
                      ..++++|+||||+|+||.+++++|+++   |++|++++|+.+..+ ..+.+.+...              ..++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            457899999999999999999999999   999999999877543 2333333221              2589999999


Q ss_pred             CCCh------HHHHHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC
Q 017580          123 LSSF------QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP  196 (369)
Q Consensus       123 ls~~------~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~  196 (369)
                      ++++      +++.++++             ++|++|||||....      +.+++.+++|+.++..+++++..    .+
T Consensus       149 l~~~~~gld~~~~~~~~~-------------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~----~~  205 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALT----TK  205 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTS----SS
T ss_pred             CCCcccCCCHHHHHHHHc-------------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHh----CC
Confidence            9944      45544433             28999999998643      34567899999999999988754    22


Q ss_pred             CCCeEEEEcCCccccccc-ccCCCccc-ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCc
Q 017580          197 VPSRIVNVTSFTHRNVFN-AQVNNETI-TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  274 (369)
Q Consensus       197 ~~g~IV~vsS~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~  274 (369)
                       .+++|++||...+.... ..+..+.. ................|+.||.+.+.+++.++.+.      ++++++++||.
T Consensus       206 -~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ivRpg~  278 (478)
T 4dqv_A          206 -LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC------ALPVAVFRCGM  278 (478)
T ss_dssp             -CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH------CCCEEEEEECE
T ss_pred             -CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh------CCCeEEEECce
Confidence             36999999976542211 11111100 00000000011122459999999999999998764      58899999999


Q ss_pred             ccCCcc--c--cchhHHHHHHHHHHHHhh--------------------CCCCHHHHHHHHHHHhcCC---CCCcccEEe
Q 017580          275 VKTNIM--R--EVPSFLSLMAFTVLKLLG--------------------LLQSPEKGINSVLDAALAP---PETSGVYFF  327 (369)
Q Consensus       275 v~T~~~--~--~~~~~~~~~~~~~~~~~~--------------------~~~~~~e~A~~v~~~~l~~---~~~sG~~~~  327 (369)
                      |..+-.  .  +............ ...+                    .+...+|+|++++.++...   +...|..|.
T Consensus       279 v~G~~~~~g~~~~~~~~~~l~~~~-~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~yn  357 (478)
T 4dqv_A          279 ILADTSYAGQLNMSDWVTRMVLSL-MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYH  357 (478)
T ss_dssp             EECCSSSSSCCCTTBHHHHHHHHH-HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEE
T ss_pred             eeCCCccCCcCCHHHHHHHHHHHH-HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEE
Confidence            976522  1  1111111111111 1111                    1256889999999776542   334456666


Q ss_pred             CCCCcc
Q 017580          328 GGKGRT  333 (369)
Q Consensus       328 ~~~g~~  333 (369)
                      ..++.+
T Consensus       358 v~~~~~  363 (478)
T 4dqv_A          358 VMNPHD  363 (478)
T ss_dssp             ESCCCC
T ss_pred             ecCCCC
Confidence            555544

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.83  E-value=3.6e-19  Score=166.41  Aligned_cols=179  Identities=15%  Similarity=0.098  Sum_probs=126.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||++++++|+++|++|++++|......+..+.+.... +.++.++.+|++|++++.++++.         
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~---------   71 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHD---------   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhc---------
Confidence            59999999999999999999999999999875322112222232211 34678899999999988777653         


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                        .++|+||||||.....  .+.+..++.+++|+.++..+++++..    .+ .++||++||.+.+..... ..      
T Consensus        72 --~~~D~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~g~~~~-~~------  135 (338)
T 1udb_A           72 --HAIDTVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRA----AN-VKNFIFSSSATVYGDNPK-IP------  135 (338)
T ss_dssp             --TTCSEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCCS-SS------
T ss_pred             --cCCCEEEECCccCccc--cchhcHHHHHHHHHHHHHHHHHHHHh----cC-CCeEEEEccHHHhCCCCC-CC------
Confidence              2599999999975211  12345567899999999999887533    22 479999999766532110 00      


Q ss_pred             ccccccCCC-chhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc
Q 017580          225 KFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  276 (369)
Q Consensus       225 ~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~  276 (369)
                        ..+..+. ++...|+.||++.+.+++.++.+.     .++++.++.|+.+-
T Consensus       136 --~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~ilR~~~v~  181 (338)
T 1udb_A          136 --YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ-----PDWSIALLRYFNPV  181 (338)
T ss_dssp             --BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS-----TTCEEEEEEECEEE
T ss_pred             --cCcccCCCCCCChHHHHHHHHHHHHHHHHHhc-----CCCceEEEeeceec
Confidence              0011222 336789999999999999999874     36888888886664

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.82  E-value=3.9e-19  Score=166.42  Aligned_cols=250  Identities=11%  Similarity=0.064  Sum_probs=162.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCCh-HHHHHHHHHHHHHHh
Q 017580           64 PVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQWLL  141 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~i~~~~~~i~~~~~  141 (369)
                      ++|+||||+|+||.+++++|+++ |++|++++|+.++.+...       ...++.++.+|++|. +.++++++   .   
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~---~---   67 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK---K---   67 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH---H---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc---C---
Confidence            36999999999999999999998 899999999876543211       134789999999984 45555443   2   


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNE  220 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~  220 (369)
                             +|++||+||...+.  ...++.++.+++|+.++..+++++.+    .+  ++||++||...+..... .+..+
T Consensus        68 -------~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~v~~SS~~v~g~~~~~~~~e~  132 (345)
T 2bll_A           68 -------CDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVK----YR--KRIIFPSTSEVYGMCSDKYFDED  132 (345)
T ss_dssp             -------CSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHH----TT--CEEEEECCGGGGBTCCCSSBCTT
T ss_pred             -------CCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHH----hC--CeEEEEecHHHcCCCCCCCcCCc
Confidence                   89999999975321  11345678899999999999888754    22  69999999776532211 11111


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------h-hHHHHHHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------P-SFLSLMAF  292 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-------~-~~~~~~~~  292 (369)
                      ....  . ......+...|+.||++.+.+++.++++.      ++++++++||.+.++.....       . ........
T Consensus       133 ~~~~--~-~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  203 (345)
T 2bll_A          133 HSNL--I-VGPVNKPRWIYSVSKQLLDRVIWAYGEKE------GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN  203 (345)
T ss_dssp             TCCC--B-CCCTTCGGGHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHH
T ss_pred             cccc--c-cCcccCcccccHHHHHHHHHHHHHHHHhc------CCCEEEEcCCcccCCCcccccccccccccHHHHHHHH
Confidence            0000  0 00011345689999999999999998765      58899999999987764321       0 11111111


Q ss_pred             HH-HHH---hh------CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc-cccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          293 TV-LKL---LG------LLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR-TVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       293 ~~-~~~---~~------~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~-~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      .. ..+   .+      .+.+++|+|++++.++.... ...|+.|...++. ++.          .+++.+...+.++..
T Consensus       204 ~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s----------~~e~~~~i~~~~g~~  273 (345)
T 2bll_A          204 LVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS----------IEELGEMLLASFEKH  273 (345)
T ss_dssp             HHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEE----------HHHHHHHHHHHHHTC
T ss_pred             HHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCC----------HHHHHHHHHHHhCCC
Confidence            00 001   01      25689999999997765433 2457777666654 444          344555555555543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.82  E-value=2.1e-19  Score=157.56  Aligned_cols=211  Identities=15%  Similarity=0.063  Sum_probs=130.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +|+||||+|+||++++++|+++|++|++++|++++++...         .++.++.+|++|.++     +.         
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~-----~~---------   58 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL-----SD---------   58 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH-----HH---------
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh-----hh---------
Confidence            5999999999999999999999999999999987654321         467899999999886     11         


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                       ..++|++|||||....           ...+|+.++..++    +.+++.+ .+++|++||..+....+......    
T Consensus        59 -~~~~d~vi~~ag~~~~-----------~~~~~~~~~~~l~----~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~----  117 (221)
T 3ew7_A           59 -LSDQNVVVDAYGISPD-----------EAEKHVTSLDHLI----SVLNGTV-SPRLLVVGGAASLQIDEDGNTLL----  117 (221)
T ss_dssp             -HTTCSEEEECCCSSTT-----------TTTSHHHHHHHHH----HHHCSCC-SSEEEEECCCC----------------
T ss_pred             -hcCCCEEEECCcCCcc-----------ccchHHHHHHHHH----HHHHhcC-CceEEEEecceEEEcCCCCcccc----
Confidence             1458999999998421           2445666655544    4555554 58999999988764322110000    


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhCCCCH
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP  304 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (369)
                          ...+..+...|+.+|.+.+.+ ..+..  .   ..++++++++||.+.++......................+.++
T Consensus       118 ----~~~~~~~~~~y~~~k~~~e~~-~~~~~--~---~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~  187 (221)
T 3ew7_A          118 ----ESKGLREAPYYPTARAQAKQL-EHLKS--H---QAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISM  187 (221)
T ss_dssp             -----------CCCSCCHHHHHHHH-HHHHT--T---TTTSCEEEEECSSCCCCC---------------------CCCH
T ss_pred             ----ccCCCCCHHHHHHHHHHHHHH-HHHHh--h---ccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeH
Confidence                002223345699999999886 33332  1   4689999999999988721110000000000000111246799


Q ss_pred             HHHHHHHHHHhcCCCCCcccEEeCCC
Q 017580          305 EKGINSVLDAALAPPETSGVYFFGGK  330 (369)
Q Consensus       305 ~e~A~~v~~~~l~~~~~sG~~~~~~~  330 (369)
                      +|+|+.++.++..++ ..|+.|...+
T Consensus       188 ~Dva~~~~~~l~~~~-~~g~~~~~~~  212 (221)
T 3ew7_A          188 EDYAIAVLDEIERPN-HLNEHFTVAG  212 (221)
T ss_dssp             HHHHHHHHHHHHSCS-CTTSEEECCC
T ss_pred             HHHHHHHHHHHhCcc-ccCCEEEECC
Confidence            999999998776554 4566666554

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.81  E-value=2.4e-20  Score=164.04  Aligned_cols=211  Identities=15%  Similarity=0.039  Sum_probs=136.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||++++++|+++|++|++++|+++++++..        ..++.++.+|++|.++     +.         
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~-----~~---------   59 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE-----AD---------   59 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH-----HH---------
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH-----hh---------
Confidence            4999999999999999999999999999999987654331        3468899999999887     11         


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                       ..++|++|||||.....         ....+|+.++..+    ++.+++.+  +++|++||.++..........  .  
T Consensus        60 -~~~~d~vi~~ag~~~~~---------~~~~~n~~~~~~l----~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~--~--  119 (224)
T 3h2s_A           60 -LDSVDAVVDALSVPWGS---------GRGYLHLDFATHL----VSLLRNSD--TLAVFILGSASLAMPGADHPM--I--  119 (224)
T ss_dssp             -HTTCSEEEECCCCCTTS---------SCTHHHHHHHHHH----HHTCTTCC--CEEEEECCGGGSBCTTCSSCG--G--
T ss_pred             -cccCCEEEECCccCCCc---------chhhHHHHHHHHH----HHHHHHcC--CcEEEEecceeeccCCCCccc--c--
Confidence             24589999999986211         1245677776554    44555554  899999998765332211000  0  


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHHHhhCCCC
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLKLLGLLQS  303 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~  303 (369)
                        ........+...|+.||++.+.+ +.+   ..   ..++++++++||++.++..... .......  ........+.+
T Consensus       120 --~~~~~~~~~~~~y~~sK~~~e~~-~~~---~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~--~~~~~~~~~i~  188 (224)
T 3h2s_A          120 --LDFPESAASQPWYDGALYQYYEY-QFL---QM---NANVNWIGISPSEAFPSGPATSYVAGKDTL--LVGEDGQSHIT  188 (224)
T ss_dssp             --GGCCGGGGGSTTHHHHHHHHHHH-HHH---TT---CTTSCEEEEEECSBCCCCCCCCEEEESSBC--CCCTTSCCBCC
T ss_pred             --ccCCCCCccchhhHHHHHHHHHH-HHH---Hh---cCCCcEEEEcCccccCCCcccCceeccccc--ccCCCCCceEe
Confidence              00001122356899999988844 222   22   5789999999999987722111 0000000  00001124679


Q ss_pred             HHHHHHHHHHHhcCCCCCcccEEeCC
Q 017580          304 PEKGINSVLDAALAPPETSGVYFFGG  329 (369)
Q Consensus       304 ~~e~A~~v~~~~l~~~~~sG~~~~~~  329 (369)
                      ++|+|++++.++..+. ..|+.|...
T Consensus       189 ~~DvA~~~~~~l~~~~-~~g~~~~~~  213 (224)
T 3h2s_A          189 TGNMALAILDQLEHPT-AIRDRIVVR  213 (224)
T ss_dssp             HHHHHHHHHHHHHSCC-CTTSEEEEE
T ss_pred             HHHHHHHHHHHhcCcc-ccCCEEEEe
Confidence            9999999998776554 446666544

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.81  E-value=1.4e-18  Score=162.85  Aligned_cols=247  Identities=13%  Similarity=0.012  Sum_probs=156.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++++|+||||+|+||.+++++|+++|++|++++|+........+.+   ....++.++.+|+++..            
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~------------   88 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL------------   88 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC------------
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh------------
Confidence            466889999999999999999999999999999999754321111111   11346889999998742            


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~  218 (369)
                            ..++|+|||+||......  ..+..++.+++|+.++..+++++.+.    +  .++|++||...+.... .+++
T Consensus        89 ------~~~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~----~--~~~v~~SS~~v~g~~~~~~~~  154 (343)
T 2b69_A           89 ------YIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV----G--ARLLLASTSEVYGDPEVHPQS  154 (343)
T ss_dssp             ------CCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH----T--CEEEEEEEGGGGBSCSSSSBC
T ss_pred             ------hcCCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHh----C--CcEEEECcHHHhCCCCCCCCc
Confidence                  246999999999753210  12345678999999999999987653    2  4999999976553221 1111


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHHHHHHHH-HH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLMAFT-VL  295 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--~~~~~~~~~~-~~  295 (369)
                      +..     +....+..+...|+.||++.+.+++.++.+.      ++++++++||.+.++.....  .......... ..
T Consensus       155 E~~-----~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (343)
T 2b69_A          155 EDY-----WGHVNPIGPRACYDEGKRVAETMCYAYMKQE------GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQG  223 (343)
T ss_dssp             TTC-----CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHT
T ss_pred             ccc-----cccCCCCCCCCchHHHHHHHHHHHHHHHHHh------CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcC
Confidence            110     0011244556789999999999999988764      67899999999988754321  0101111110 00


Q ss_pred             HHh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          296 KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       296 ~~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                      .+.         ..+..++|+|++++.++..+  ..|.| ...++.+..          .+++.+...+.++.
T Consensus       224 ~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~~~-~i~~~~~~s----------~~e~~~~i~~~~g~  283 (343)
T 2b69_A          224 EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN--VSSPV-NLGNPEEHT----------ILEFAQLIKNLVGS  283 (343)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHTSS--CCSCE-EESCCCEEE----------HHHHHHHHHHHHTC
T ss_pred             CCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC--CCCeE-EecCCCCCc----------HHHHHHHHHHHhCC
Confidence            010         12457999999999765432  23444 444455543          33455555555554

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.81  E-value=3.7e-19  Score=162.89  Aligned_cols=219  Identities=16%  Similarity=0.073  Sum_probs=151.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .++|+||||+|+||++++++|+++|++|++++|+                       .+|++|.+++.++++..      
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~------   62 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK------   62 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH------
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc------
Confidence            4789999999999999999999999999999996                       27999999888776642      


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCcc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNET  221 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~~  221 (369)
                           ++|++||+||....  +.+.+.+++.+++|+.++..+++++.+.    +  .+||++||.+.+.... .++++  
T Consensus        63 -----~~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~--~~iv~~SS~~v~~~~~~~~~~E--  127 (292)
T 1vl0_A           63 -----KPNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----G--AEIVQISTDYVFDGEAKEPITE--  127 (292)
T ss_dssp             -----CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGSCSCCSSCBCT--
T ss_pred             -----CCCEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C--CeEEEechHHeECCCCCCCCCC--
Confidence                 48999999997432  2234677889999999999999998663    2  4999999987653321 11111  


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-HHH---
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-LKL---  297 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~---  297 (369)
                              ..+..+...|+.||++.+.+++.++.          .++.+.|+.+.++ ......  ....... ..+   
T Consensus       128 --------~~~~~~~~~Y~~sK~~~E~~~~~~~~----------~~~~lR~~~v~G~-~~~~~~--~~~~~~~~~~~~~~  186 (292)
T 1vl0_A          128 --------FDEVNPQSAYGKTKLEGENFVKALNP----------KYYIVRTAWLYGD-GNNFVK--TMINLGKTHDELKV  186 (292)
T ss_dssp             --------TSCCCCCSHHHHHHHHHHHHHHHHCS----------SEEEEEECSEESS-SSCHHH--HHHHHHHHCSEEEE
T ss_pred             --------CCCCCCccHHHHHHHHHHHHHHhhCC----------CeEEEeeeeeeCC-CcChHH--HHHHHHhcCCcEEe
Confidence                    13334456899999999998877642          2677888888766 222111  1111000 001   


Q ss_pred             ----hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          298 ----LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       298 ----~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                          ...+.+++|+|++++.++..+   .|..|...++.+..          .+++.+...+.++.
T Consensus       187 ~~~~~~~~i~v~Dva~~~~~~~~~~---~~~~~~i~~~~~~s----------~~e~~~~i~~~~g~  239 (292)
T 1vl0_A          187 VHDQVGTPTSTVDLARVVLKVIDEK---NYGTFHCTCKGICS----------WYDFAVEIFRLTGI  239 (292)
T ss_dssp             ESSCEECCEEHHHHHHHHHHHHHHT---CCEEEECCCBSCEE----------HHHHHHHHHHHHCC
T ss_pred             ecCeeeCCccHHHHHHHHHHHHhcC---CCcEEEecCCCCcc----------HHHHHHHHHHHhCC
Confidence                123457999999999766543   46667766666554          33455555555543

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.81  E-value=7.3e-19  Score=162.37  Aligned_cols=224  Identities=13%  Similarity=0.037  Sum_probs=152.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~--G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++||||+|+||.+++++|+++  |++|++++|+....+     +.     .++.++.+|++|.+++.+++++     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~-----   66 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEV-----   66 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHH-----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhh-----
Confidence            467999999999999999999999  899999999876522     11     1356889999999988877653     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                            .++|++||+||.....   ..+..++.+++|+.++..+++++.+    .+ .+++|++||...+......... 
T Consensus        67 ------~~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~-  131 (312)
T 2yy7_A           67 ------HKITDIYLMAALLSAT---AEKNPAFAWDLNMNSLFHVLNLAKA----KK-IKKIFWPSSIAVFGPTTPKENT-  131 (312)
T ss_dssp             ------TTCCEEEECCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHT----TS-CSEEECCEEGGGCCTTSCSSSB-
T ss_pred             ------cCCCEEEECCccCCCc---hhhChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHHhCCCCCCCCc-
Confidence                  2599999999975321   2356778899999999999998754    22 4699999998766332110000 


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc----hhHHHHHHH-HHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----PSFLSLMAF-TVL  295 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~----~~~~~~~~~-~~~  295 (369)
                             .+..+..+...|+.||++.+.+++.++.++      ++++++++||.+..+.....    ......... ...
T Consensus       132 -------~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  198 (312)
T 2yy7_A          132 -------PQYTIMEPSTVYGISKQAGERWCEYYHNIY------GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD  198 (312)
T ss_dssp             -------CSSCBCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHT
T ss_pred             -------cccCcCCCCchhHHHHHHHHHHHHHHHHhc------CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcC
Confidence                   011333456789999999999999988765      68999999999987542111    011111100 000


Q ss_pred             HHh---------hCCCCHHHHHHHHHHHhcCCCCC--cccEEeCC
Q 017580          296 KLL---------GLLQSPEKGINSVLDAALAPPET--SGVYFFGG  329 (369)
Q Consensus       296 ~~~---------~~~~~~~e~A~~v~~~~l~~~~~--sG~~~~~~  329 (369)
                      .+.         ..+..++|+|++++.++..+...  .|..|...
T Consensus       199 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~  243 (312)
T 2yy7_A          199 KKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLA  243 (312)
T ss_dssp             SEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECC
T ss_pred             CCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeC
Confidence            000         01246799999999776554321  23455544

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.80  E-value=6.6e-19  Score=159.48  Aligned_cols=221  Identities=17%  Similarity=0.081  Sum_probs=147.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||++++++|+ +|++|++++|+.+..           .+     +.+|++|++++.++++.+        
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----------~~-----~~~Dl~~~~~~~~~~~~~--------   56 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----------GG-----YKLDLTDFPRLEDFIIKK--------   56 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----------TC-----EECCTTSHHHHHHHHHHH--------
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----------CC-----ceeccCCHHHHHHHHHhc--------
Confidence            59999999999999999999 589999999987420           12     789999999988877653        


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                         ++|++|||||....  ..+.+.+++.+++|+.++..+++++.+    .  +++||++||..++.....++.+     
T Consensus        57 ---~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~e-----  120 (273)
T 2ggs_A           57 ---RPDVIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDYVFDGEKGNYKE-----  120 (273)
T ss_dssp             ---CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGSCSSSCSBCT-----
T ss_pred             ---CCCEEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecceeEcCCCCCcCC-----
Confidence               48999999997532  223467889999999999999999854    2  3599999998876432221111     


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH------h
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL------L  298 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------~  298 (369)
                           ..+..+...|+.||++.+.+++.    +.   ...+|++.+. |  .+++....   ...  .....+      .
T Consensus       121 -----~~~~~~~~~Y~~sK~~~e~~~~~----~~---~~~iR~~~v~-G--~~~~~~~~---~~~--~~~~~~~~~~~~~  180 (273)
T 2ggs_A          121 -----EDIPNPINYYGLSKLLGETFALQ----DD---SLIIRTSGIF-R--NKGFPIYV---YKT--LKEGKTVFAFKGY  180 (273)
T ss_dssp             -----TSCCCCSSHHHHHHHHHHHHHCC----TT---CEEEEECCCB-S--SSSHHHHH---HHH--HHTTCCEEEESCE
T ss_pred             -----CCCCCCCCHHHHHHHHHHHHHhC----CC---eEEEeccccc-c--ccHHHHHH---HHH--HHcCCCEEeecCC
Confidence                 12334457899999999998877    32   3345555554 3  23221110   000  000001      2


Q ss_pred             hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          299 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      ..+.+++|+|++++.++...  .+| .|..++ ..+.          .+++.+...+.++..
T Consensus       181 ~~~~~~~dva~~i~~~~~~~--~~g-~~~i~~-~~~s----------~~e~~~~~~~~~g~~  228 (273)
T 2ggs_A          181 YSPISARKLASAILELLELR--KTG-IIHVAG-ERIS----------RFELALKIKEKFNLP  228 (273)
T ss_dssp             ECCCBHHHHHHHHHHHHHHT--CCE-EEECCC-CCEE----------HHHHHHHHHHHTTCC
T ss_pred             CCceEHHHHHHHHHHHHhcC--cCC-eEEECC-Cccc----------HHHHHHHHHHHhCCC
Confidence            35678999999999776543  255 455444 4443          344556666666544

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.80  E-value=3.5e-19  Score=164.25  Aligned_cols=225  Identities=14%  Similarity=0.065  Sum_probs=150.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      +++||||+|+||.+++++|+++| ++|++++|+.....  ...+.    +.  . +.+|+++.++++++++..       
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~--~-~~~d~~~~~~~~~~~~~~-------   64 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DL--N-IADYMDKEDFLIQIMAGE-------   64 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----TS--C-CSEEEEHHHHHHHHHTTC-------
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----cc--e-eccccccHHHHHHHHhcc-------
Confidence            38999999999999999999999 89999999865421  11111    11  2 678999887766554310       


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETI  222 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~~~  222 (369)
                       ..+++|++||+||....    +.+..++.+++|+.++..+++++.+.    + . ++|++||...+..... .++++  
T Consensus        65 -~~~~~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~-~~v~~SS~~v~g~~~~~~~~E~--  131 (310)
T 1eq2_A           65 -EFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDFIESR--  131 (310)
T ss_dssp             -CCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGTTCCSCBCSSG--
T ss_pred             -ccCCCcEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEeeHHHhCCCCCCCCCCC--
Confidence             12369999999997643    33456789999999999999988653    2 4 9999999876532211 11111  


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc------c-hhHHHHHH-HHH
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE------V-PSFLSLMA-FTV  294 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~------~-~~~~~~~~-~~~  294 (369)
                              .+..+...|+.||++.+.+++.++.+      .++++++++||.+.++....      . +....... ...
T Consensus       132 --------~~~~p~~~Y~~sK~~~e~~~~~~~~~------~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  197 (310)
T 1eq2_A          132 --------EYEKPLNVYGYSKFLFDEYVRQILPE------ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGES  197 (310)
T ss_dssp             --------GGCCCSSHHHHHHHHHHHHHHHHGGG------CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC---
T ss_pred             --------CCCCCCChhHHHHHHHHHHHHHHHHH------cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCC
Confidence                    23344568999999999999888754      47899999999998876431      1 11111000 000


Q ss_pred             --H----HH-hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          295 --L----KL-LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       295 --~----~~-~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                        .    .. ...+.+++|+|++++.++..+.   |..|...++.++.
T Consensus       198 ~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s  242 (310)
T 1eq2_A          198 PKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAES  242 (310)
T ss_dssp             ----------CBCEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCBC
T ss_pred             cEEecCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEEeCCCccC
Confidence              0    01 2234679999999997765544   5555555555543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=9.7e-19  Score=179.27  Aligned_cols=191  Identities=16%  Similarity=0.104  Sum_probs=134.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++|+||||+|+||++++++|+++|++|++++|+.....+..+++.... ..++.++.+|+++.+++.+++++    
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~----   82 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKE----   82 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHH----
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHh----
Confidence            4678999999999999999999999999999999997654333333332211 34678899999999988877653    


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                             .++|+|||+||.....  ...+..++.+++|+.++..+++++...    + .++||++||.+.+.........
T Consensus        83 -------~~~D~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~~iV~~SS~~vyg~~~~~~~~  148 (699)
T 1z45_A           83 -------YKIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQY----N-VSKFVFSSSATVYGDATRFPNM  148 (699)
T ss_dssp             -------SCCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCCGGGSTTC
T ss_pred             -------CCCCEEEECCcccCcC--ccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEECcHHHhCCCcccccc
Confidence                   1599999999975311  112334678999999999998766432    2 4799999997765321100000


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                      .     ...+..+..+...|+.||++.+.+++.++.+.    ..++++++++|+.+-.+
T Consensus       149 ~-----~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          149 I-----PIPEECPLGPTNPYGHTKYAIENILNDLYNSD----KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             C-----SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS----TTSCEEEEEEECEEECC
T ss_pred             C-----CccccCCCCCCChHHHHHHHHHHHHHHHHHhc----cCCCcEEEEEeccccCC
Confidence            0     00111233456789999999999999998775    36899999999887654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.79  E-value=2.6e-18  Score=174.97  Aligned_cols=238  Identities=11%  Similarity=0.062  Sum_probs=158.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHH-HHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~-i~~~~~~i~~  138 (369)
                      +++++|+||||+|+||.+++++|+++ |++|++++|+.+..+..       ....++.++.+|+++.++ +.++++    
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~v~~Dl~d~~~~~~~~~~----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVK----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG-------TTCTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh-------ccCCceEEEECCCCCcHHHHHHhhc----
Confidence            56889999999999999999999998 89999999987654321       113578899999999764 444433    


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QV  217 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~  217 (369)
                               ++|++||+||...+.  ...+..++.+++|+.++..+++++.+.    +  +++|++||...+..... .+
T Consensus       382 ---------~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~--~r~V~~SS~~vyg~~~~~~~  444 (660)
T 1z7e_A          382 ---------KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----R--KRIIFPSTSEVYGMCSDKYF  444 (660)
T ss_dssp             ---------HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----T--CEEEEECCGGGGBTCCSSSB
T ss_pred             ---------CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHHh----C--CEEEEEecHHHcCCCCCccc
Confidence                     289999999975321  123456789999999999998887543    2  69999999776532211 11


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--------hhHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--------PSFLSL  289 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--------~~~~~~  289 (369)
                      +.+....  . ......+...|+.||++.+.+++.++.+.      ++++++++||.+.++.....        ......
T Consensus       445 ~E~~~~~--~-~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~  515 (660)
T 1z7e_A          445 DEDHSNL--I-VGPVNKPRWIYSVSKQLLDRVIWAYGEKE------GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQL  515 (660)
T ss_dssp             CTTTCCE--E-ECCTTCTTHHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHH
T ss_pred             CCCcccc--c-cCcccCCCCCcHHHHHHHHHHHHHHHHHc------CCCEEEECCCcccCCCccccccccccccchHHHH
Confidence            1110000  0 00011345689999999999999998765      68899999999988764321        001111


Q ss_pred             HHHH-HHHHh---------hCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc-ccc
Q 017580          290 MAFT-VLKLL---------GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR-TVN  335 (369)
Q Consensus       290 ~~~~-~~~~~---------~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~-~~~  335 (369)
                      .... ...+.         ..+.+++|+|++++.++.... ...|..|..+++. ++.
T Consensus       516 ~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s  573 (660)
T 1z7e_A          516 ILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS  573 (660)
T ss_dssp             HHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEE
T ss_pred             HHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcC
Confidence            1111 00111         124569999999997665443 2467777777664 454

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=2.3e-20  Score=163.05  Aligned_cols=190  Identities=14%  Similarity=0.038  Sum_probs=135.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++++||||+|+||++++++|+++|+  +|++++|++++          .  ..++.++.+|+++.+++.+        
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~--------   63 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLD--------   63 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCC--------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHH--------
Confidence            367899999999999999999999998  99999998764          1  3467888999988765432        


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                           ..  +|++|||||....    +.+.+++.+++|+.++..+++++.+.    + .++||++||....         
T Consensus        64 -----~~--~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~---------  118 (215)
T 2a35_A           64 -----GS--IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM----G-ARHYLVVSALGAD---------  118 (215)
T ss_dssp             -----SC--CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEECCTTCC---------
T ss_pred             -----hh--hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHHc----C-CCEEEEECCcccC---------
Confidence                 22  8999999997532    24567888999999999999987543    2 4699999998765         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeE-EEEecCCcccCCcccc-chhHHHHHHHHHHHH
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS-VIAADPGVVKTNIMRE-VPSFLSLMAFTVLKL  297 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~-v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~  297 (369)
                                 .  ++...|+.+|++++.+++.          .+++ +++++||++.++.... ...............
T Consensus       119 -----------~--~~~~~y~~sK~~~e~~~~~----------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  175 (215)
T 2a35_A          119 -----------A--KSSIFYNRVKGELEQALQE----------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPG  175 (215)
T ss_dssp             -----------T--TCSSHHHHHHHHHHHHHTT----------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----C
T ss_pred             -----------C--CCccHHHHHHHHHHHHHHH----------cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCC
Confidence                       1  1235799999999887643          3687 9999999998875321 100000000000000


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCC
Q 017580          298 LGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      ...+.+++|+|+.++.++..+.
T Consensus       176 ~~~~i~~~Dva~~~~~~~~~~~  197 (215)
T 2a35_A          176 KYHGIEACDLARALWRLALEEG  197 (215)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCC
T ss_pred             CcCcEeHHHHHHHHHHHHhcCC
Confidence            1123588999999998775543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.79  E-value=6.2e-18  Score=156.82  Aligned_cols=238  Identities=11%  Similarity=0.032  Sum_probs=157.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++++||||+|+||.+++++|+++|++|++++|+.                      .+|++|.+++.+++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            357899999999999999999999999999988762                      27999998888776642     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNE  220 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~  220 (369)
                            ++|++||+||..... ....+..++.+++|+.++..+++++.+.    + .+++|++||...+.... .++.++
T Consensus        55 ------~~d~vih~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~  122 (321)
T 1e6u_A           55 ------RIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYPKLAKQPMAES  122 (321)
T ss_dssp             ------CCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSCTTCCSSBCGG
T ss_pred             ------CCCEEEEcCeecCCc-chhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCeEEEEccHHHcCCCCCCCcCcc
Confidence                  489999999975311 1124456788999999999999887552    2 36999999987653221 111111


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc----hhHHHHHHHHHH-
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----PSFLSLMAFTVL-  295 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~----~~~~~~~~~~~~-  295 (369)
                      ..     ......+....|+.||++.+.+++.++.+.      ++++++++||.+..+.....    ............ 
T Consensus       123 ~~-----~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  191 (321)
T 1e6u_A          123 EL-----LQGTLEPTNEPYAIAKIAGIKLCESYNRQY------GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEA  191 (321)
T ss_dssp             GT-----TSSCCCGGGHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHH
T ss_pred             cc-----ccCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHh
Confidence            00     000122334689999999999999998764      68999999999987754321    011111111110 


Q ss_pred             -----HHh---h------CCCCHHHHHHHHHHHhcCCCCC-------cccEEeCCCCccccCCcccCCHHHHHHHHHHHH
Q 017580          296 -----KLL---G------LLQSPEKGINSVLDAALAPPET-------SGVYFFGGKGRTVNSSALSFNSKLAGELWTTSC  354 (369)
Q Consensus       296 -----~~~---~------~~~~~~e~A~~v~~~~l~~~~~-------sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~  354 (369)
                           .+.   +      .+..++|+|++++.++......       .|..|...++.++.          .+++.+...
T Consensus       192 ~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s----------~~e~~~~i~  261 (321)
T 1e6u_A          192 TAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCT----------IRELAQTIA  261 (321)
T ss_dssp             HHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEE----------HHHHHHHHH
T ss_pred             hhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCcc----------HHHHHHHHH
Confidence                 011   1      2347999999999776554321       24555555555554          344555566


Q ss_pred             Hhhhc
Q 017580          355 NLFIN  359 (369)
Q Consensus       355 ~~~~~  359 (369)
                      +.++.
T Consensus       262 ~~~g~  266 (321)
T 1e6u_A          262 KVVGY  266 (321)
T ss_dssp             HHHTC
T ss_pred             HHhCC
Confidence            65553

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.78  E-value=3.9e-18  Score=157.32  Aligned_cols=242  Identities=11%  Similarity=-0.033  Sum_probs=158.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++|+||||+|+||++++++|+++|+      +...             ....+..+.+|++|.+++.++++.     
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~~~~~~~~~~-----   59 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDTAQTRALFEK-----   59 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSHHHHHHHHHH-----
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCHHHHHHHHhh-----
Confidence            5678999999999999999999999998      1100             012334457899999988877663     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNN  219 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~  219 (369)
                            .++|++||+||..... ..+.+..++.+++|+.++..+++++...    + .+++|++||...+..... ++.+
T Consensus        60 ------~~~d~Vih~A~~~~~~-~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E  127 (319)
T 4b8w_A           60 ------VQPTHVIHLAAMVGGL-FRNIKYNLDFWRKNVHMNDNVLHSAFEV----G-ARKVVSCLSTCIFPDKTTYPIDE  127 (319)
T ss_dssp             ------SCCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSCSSCCSSBCG
T ss_pred             ------cCCCEEEECceecccc-cccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEEcchhhcCCCCCCCccc
Confidence                  2599999999984311 1123455678999999999999887443    2 369999999876532211 1111


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hHHHHHHHH--
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SFLSLMAFT--  293 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~----~~~~~~~~~--  293 (369)
                      +..     ....+.+....|+.||.+.+.+++.++++.      ++++++++||.+..+......    .........  
T Consensus       128 ~~~-----~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~  196 (319)
T 4b8w_A          128 TMI-----HNGPPHNSNFGYSYAKRMIDVQNRAYFQQY------GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHL  196 (319)
T ss_dssp             GGG-----GBSCCCSSSHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHH
T ss_pred             ccc-----ccCCCCCCcchHHHHHHHHHHHHHHHHHhh------CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHH
Confidence            110     000223334479999999999999998765      688999999999877543210    001111110  


Q ss_pred             -HH--HHh---h------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          294 -VL--KLL---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       294 -~~--~~~---~------~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                       ..  .+.   +      .+..++|+|++++.++...+...|..|...++.+..          .+++.+...+.++.
T Consensus       197 ~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s----------~~e~~~~i~~~~g~  264 (319)
T 4b8w_A          197 AKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVS----------IKEAAEAVVEAMDF  264 (319)
T ss_dssp             HHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEE----------HHHHHHHHHHHTTC
T ss_pred             HhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCcee----------HHHHHHHHHHHhCC
Confidence             00  011   1      235799999999987766555556677666666665          44456666666654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.78  E-value=7.5e-18  Score=155.96  Aligned_cols=166  Identities=11%  Similarity=0.089  Sum_probs=125.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           65 VCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~--G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+||||+|+||.+++++|+++  |++|++++|+.+..+             .+.++.+|++|.+++.+++++       
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~-------   60 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEK-------   60 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHH-------
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhh-------
Confidence            3899999999999999999999  899999998765321             356889999999988877653       


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                          .++|++||+||....   .+.+..+..+++|+.++..+++++.+.    + .+++|++||...+.........   
T Consensus        61 ----~~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~---  125 (317)
T 3ajr_A           61 ----YSIDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQH----R-VEKVVIPSTIGVFGPETPKNKV---  125 (317)
T ss_dssp             ----TTCCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGCCTTSCSSSB---
T ss_pred             ----cCCcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHHc----C-CCEEEEecCHHHhCCCCCCCCc---
Confidence                259999999997532   123567789999999999999987542    2 4699999998776332110000   


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  276 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~  276 (369)
                           .+..+..+...|+.||++.+.+++.++.+.      +++++++.|+.+-
T Consensus       126 -----~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~lR~~~~~  168 (317)
T 3ajr_A          126 -----PSITITRPRTMFGVTKIAAELLGQYYYEKF------GLDVRSLRYPGII  168 (317)
T ss_dssp             -----CSSSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEE
T ss_pred             -----cccccCCCCchHHHHHHHHHHHHHHHHHhc------CCeEEEEecCcEe
Confidence                 011333456789999999999999888654      6899999865554

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.77  E-value=2e-18  Score=157.62  Aligned_cols=218  Identities=13%  Similarity=0.060  Sum_probs=150.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||.+++++|+++|++|++++|.                       ++|++|.+++.++++..        
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~--------   55 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI--------   55 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc--------
Confidence            79999999999999999999999999999992                       38999999888877643        


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCcccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNETIT  223 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~~~~  223 (369)
                         ++|++||+||....  ..+.+.++..+++|+.++..+++++.+.      +.++|++||...+.... .++.     
T Consensus        56 ---~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~vy~~~~~~~~~-----  119 (287)
T 3sc6_A           56 ---RPHIIIHCAAYTKV--DQAEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTDYVFQGDRPEGYD-----  119 (287)
T ss_dssp             ---CCSEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCCCCSSCBC-----
T ss_pred             ---CCCEEEECCcccCh--HHHhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchhhhcCCCCCCCCC-----
Confidence               48999999997532  1122567889999999999999987543      25899999987653321 1111     


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-HHHh----
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-LKLL----  298 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~----  298 (369)
                           +..+..+...|+.||.+.+.+++.++.          +++.++||.+.++........  ...... ..+.    
T Consensus       120 -----E~~~~~p~~~Y~~sK~~~E~~~~~~~~----------~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~  182 (287)
T 3sc6_A          120 -----EFHNPAPINIYGASKYAGEQFVKELHN----------KYFIVRTSWLYGKYGNNFVKT--MIRLGKEREEISVVA  182 (287)
T ss_dssp             -----TTSCCCCCSHHHHHHHHHHHHHHHHCS----------SEEEEEECSEECSSSCCHHHH--HHHHHTTCSEEEEEC
T ss_pred             -----CCCCCCCCCHHHHHHHHHHHHHHHhCC----------CcEEEeeeeecCCCCCcHHHH--HHHHHHcCCCeEeec
Confidence                 124445567899999999998876542          357889999987654332111  100000 0001    


Q ss_pred             ---hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017580          299 ---GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  359 (369)
Q Consensus       299 ---~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  359 (369)
                         ..+..++|+|++++.++..+.  +| .|...++.+..          .+++.+...+.++.
T Consensus       183 ~~~~~~i~v~Dva~~~~~~~~~~~--~~-~~~i~~~~~~s----------~~e~~~~i~~~~g~  233 (287)
T 3sc6_A          183 DQIGSPTYVADLNVMINKLIHTSL--YG-TYHVSNTGSCS----------WFEFAKKIFSYANM  233 (287)
T ss_dssp             SCEECCEEHHHHHHHHHHHHTSCC--CE-EEECCCBSCEE----------HHHHHHHHHHHHTC
T ss_pred             CcccCceEHHHHHHHHHHHHhCCC--CC-eEEEcCCCccc----------HHHHHHHHHHHcCC
Confidence               123459999999997665544  44 55666666554          34455556665553

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.76  E-value=3.5e-18  Score=156.87  Aligned_cols=210  Identities=12%  Similarity=0.027  Sum_probs=144.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +++||||+|+||.+++++|+ +|++|++++|+..                   .+.+|++|.+++.++++..        
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~--------   53 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL--------   53 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH--------
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc--------
Confidence            59999999999999999999 8999999999852                   3578999999888776642        


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCcccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETIT  223 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~~~~  223 (369)
                         ++|++||+||....  ..+.+..++.+++|+.++..+++++.+    .+  .++|++||...+..... ++.     
T Consensus        54 ---~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--~~~v~~SS~~vy~~~~~~~~~-----  117 (299)
T 1n2s_A           54 ---RPDVIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAKAANE----TG--AWVVHYSTDYVFPGTGDIPWQ-----  117 (299)
T ss_dssp             ---CCSEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT--CEEEEEEEGGGSCCCTTCCBC-----
T ss_pred             ---CCCEEEECcccCCH--hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC--CcEEEEecccEEeCCCCCCCC-----
Confidence               48999999997532  112345678899999999999998743    22  48999999876533211 111     


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-HHHh----
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-LKLL----  298 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~----  298 (369)
                           +..+..+...|+.||++.+.+++.++       .   ++++++||.+.++.......  ....... ..+.    
T Consensus       118 -----E~~~~~p~~~Y~~sK~~~E~~~~~~~-------~---~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~  180 (299)
T 1n2s_A          118 -----ETDATSPLNVYGKTKLAGEKALQDNC-------P---KHLIFRTSWVYAGKGNNFAK--TMLRLAKERQTLSVIN  180 (299)
T ss_dssp             -----TTSCCCCSSHHHHHHHHHHHHHHHHC-------S---SEEEEEECSEECSSSCCHHH--HHHHHHHHCSEEEEEC
T ss_pred             -----CCCCCCCccHHHHHHHHHHHHHHHhC-------C---CeEEEeeeeecCCCcCcHHH--HHHHHHhcCCCEEeec
Confidence                 11333446689999999998887653       2   58889999998876442211  1111000 0011    


Q ss_pred             ---hCCCCHHHHHHHHHHHhcCCC-CC-cccEEeCCCCcccc
Q 017580          299 ---GLLQSPEKGINSVLDAALAPP-ET-SGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ---~~~~~~~e~A~~v~~~~l~~~-~~-sG~~~~~~~g~~~~  335 (369)
                         ..+..++|+|++++.++..+. .. .|..|...++++..
T Consensus       181 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (299)
T 1n2s_A          181 DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTT  222 (299)
T ss_dssp             SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEE
T ss_pred             CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCC
Confidence               123458999999997665432 22 36667767666654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.76  E-value=1.2e-18  Score=161.27  Aligned_cols=226  Identities=15%  Similarity=0.013  Sum_probs=142.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++|+||||+|+||.+++++|+++|++|++++|+........+.+.......++.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            4578999999999999999999999999999999986521000000100001122333444443                


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                             ++|++||+||.....  ...+..+..++ |+.++..+++++...-     .+++|++||...+.......   
T Consensus        69 -------~~d~vi~~a~~~~~~--~~~~~~~~~~~-n~~~~~~ll~a~~~~~-----v~~~v~~SS~~v~~~~~~~~---  130 (321)
T 3vps_A           69 -------DVRLVYHLASHKSVP--RSFKQPLDYLD-NVDSGRHLLALCTSVG-----VPKVVVGSTCEVYGQADTLP---  130 (321)
T ss_dssp             -------TEEEEEECCCCCCHH--HHTTSTTTTHH-HHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCSCSSSS---
T ss_pred             -------cCCEEEECCccCChH--HHHhCHHHHHH-HHHHHHHHHHHHHHcC-----CCeEEEecCHHHhCCCCCCC---
Confidence                   499999999975321  01122334566 9999999998875541     36999999987653321110   


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCe-EEEEecCCcccCCccccchhHHHHHHHHH-HHHh
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV-SVIAADPGVVKTNIMREVPSFLSLMAFTV-LKLL  298 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~  298 (369)
                            ..+..+..+...|+.||.+.+.+++.++.+      .++ ++++++||.+.++................ ..+.
T Consensus       131 ------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  198 (321)
T 3vps_A          131 ------TPEDSPLSPRSPYAASKVGLEMVAGAHQRA------SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNEL  198 (321)
T ss_dssp             ------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHS------SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEE
T ss_pred             ------CCCCCCCCCCChhHHHHHHHHHHHHHHHHH------cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCe
Confidence                  111234455678999999999999998874      468 99999999998876543111111111111 1111


Q ss_pred             ---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          299 ---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                               ..+.+++|+|++++.++..+..  | .|...+++++.
T Consensus       199 ~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~--g-~~~i~~~~~~s  241 (321)
T 3vps_A          199 PVEGDGEQRRDFTYITDVVDKLVALANRPLP--S-VVNFGSGQSLS  241 (321)
T ss_dssp             EEETTSCCEECEEEHHHHHHHHHHGGGSCCC--S-EEEESCSCCEE
T ss_pred             EEeCCCCceEceEEHHHHHHHHHHHHhcCCC--C-eEEecCCCccc
Confidence                     1235799999999966554433  6 66666666654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.76  E-value=3.6e-18  Score=156.00  Aligned_cols=228  Identities=9%  Similarity=-0.021  Sum_probs=153.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++|+||| +|+||.+++++|+++|++|++++|+.+.+            ..++.++.+|++|.+++.++++       
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~-------   61 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH-------   61 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG-------
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc-------
Confidence            356899999 59999999999999999999999987642            3467889999999988766443       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                           +++|++||+||..       ....+..+++|+.++..+++++.    +.+ .+++|++||...+......     
T Consensus        62 -----~~~d~vih~a~~~-------~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~v~~SS~~vyg~~~~~-----  119 (286)
T 3gpi_A           62 -----LRPEILVYCVAAS-------EYSDEHYRLSYVEGLRNTLSALE----GAP-LQHVFFVSSTGVYGQEVEE-----  119 (286)
T ss_dssp             -----GCCSEEEECHHHH-------HHC-----CCSHHHHHHHHHHTT----TSC-CCEEEEEEEGGGCCCCCSS-----
T ss_pred             -----CCCCEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHHHHh----hCC-CCEEEEEcccEEEcCCCCC-----
Confidence                 3599999999963       24456788999999999988875    222 4799999998765322110     


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH----HH
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL----KL  297 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~----~~  297 (369)
                          ...+..+..+...|+.||.+.+.+ +..           ++++++.||.+..+....+...  ... ...    ..
T Consensus       120 ----~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-----------~~~~ilR~~~v~G~~~~~~~~~--~~~-~~~~~~~~~  180 (286)
T 3gpi_A          120 ----WLDEDTPPIAKDFSGKRMLEAEAL-LAA-----------YSSTILRFSGIYGPGRLRMIRQ--AQT-PEQWPARNA  180 (286)
T ss_dssp             ----EECTTSCCCCCSHHHHHHHHHHHH-GGG-----------SSEEEEEECEEEBTTBCHHHHH--TTC-GGGSCSSBC
T ss_pred             ----CCCCCCCCCCCChhhHHHHHHHHH-Hhc-----------CCeEEEecccccCCCchhHHHH--HHh-cccCCCcCc
Confidence                111124445567899999998876 432           5688999999987754321110  000 000    00


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          298 LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      ...+..++|+|++++.++..+. ...|..|...+++++.          .+++++...+.++..
T Consensus       181 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s----------~~e~~~~i~~~~g~~  234 (286)
T 3gpi_A          181 WTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLP----------VHDLLRWLADRQGIA  234 (286)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEE----------HHHHHHHHHHHTTCC
T ss_pred             eeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCC----------HHHHHHHHHHHcCCC
Confidence            1124678999999997766542 3346666666666664          445666667766654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.74  E-value=1.1e-17  Score=152.54  Aligned_cols=197  Identities=11%  Similarity=-0.037  Sum_probs=137.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           64 PVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~--G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++||||+|+||++++++|+++  |++|++++|+.++.+.+.        ..++.++.+|++|.+++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA--------DQGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH--------HTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh--------hcCCeEEEeccCCHHHHHHHHh-------
Confidence            36999999999999999999999  999999999987654432        1257889999999887765533       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                            .+|++||+||..     .. +      ++|+.++..+++++..    .+ .++||++||.....          
T Consensus        66 ------~~d~vi~~a~~~-----~~-~------~~n~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~~----------  112 (287)
T 2jl1_A           66 ------GVSKLLFISGPH-----YD-N------TLLIVQHANVVKAARD----AG-VKHIAYTGYAFAEE----------  112 (287)
T ss_dssp             ------TCSEEEECCCCC-----SC-H------HHHHHHHHHHHHHHHH----TT-CSEEEEEEETTGGG----------
T ss_pred             ------cCCEEEEcCCCC-----cC-c------hHHHHHHHHHHHHHHH----cC-CCEEEEECCCCCCC----------
Confidence                  389999999952     11 1      6788898888887643    22 46999999976530          


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-HH---
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-KL---  297 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~---  297 (369)
                               .+    ..|+.+|.+.+.+++.          .+++++.++||++.++......  ......... .+   
T Consensus       113 ---------~~----~~y~~~K~~~E~~~~~----------~~~~~~ilrp~~~~~~~~~~~~--~~~~~~~~~~~~~~~  167 (287)
T 2jl1_A          113 ---------SI----IPLAHVHLATEYAIRT----------TNIPYTFLRNALYTDFFVNEGL--RASTESGAIVTNAGS  167 (287)
T ss_dssp             ---------CC----STHHHHHHHHHHHHHH----------TTCCEEEEEECCBHHHHSSGGG--HHHHHHTEEEESCTT
T ss_pred             ---------CC----CchHHHHHHHHHHHHH----------cCCCeEEEECCEeccccchhhH--HHHhhCCceeccCCC
Confidence                     11    2699999999888742          3688999999998766521111  010000000 00   


Q ss_pred             -hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          298 -LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       298 -~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                       ...+.+++|+|++++.++..+ ...|+.|...++.+.
T Consensus       168 ~~~~~i~~~Dva~~~~~~~~~~-~~~g~~~~i~~~~~~  204 (287)
T 2jl1_A          168 GIVNSVTRNELALAAATVLTEE-GHENKTYNLVSNQPW  204 (287)
T ss_dssp             CCBCCBCHHHHHHHHHHHHTSS-SCTTEEEEECCSSCB
T ss_pred             CccCccCHHHHHHHHHHHhcCC-CCCCcEEEecCCCcC
Confidence             124578999999999766543 345767766666554

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.74  E-value=2.4e-17  Score=162.82  Aligned_cols=236  Identities=13%  Similarity=0.084  Sum_probs=153.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch---HHHHHHHHHhh-------cCCCcEEEEEecCCChHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL---LSETMADITSR-------NKDARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~---~~~~~~~~~~~-------~~~~~v~~~~~Dls~~~~i~~~  132 (369)
                      .++|+||||+|+||.+++++|.++|++|++++|+...   .+.+.+.+...       ....++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4799999999999999999999999999999999873   33333333221       11458999999999987765  


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                                  ...++|+||||||....     ...++..+++|+.++..+++.+.+    .  ..++|++||... ..
T Consensus       228 ------------~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~----~--~~~~v~iSS~~v-G~  283 (508)
T 4f6l_B          228 ------------LPENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ----H--HARLIYVSTISV-GT  283 (508)
T ss_dssp             ------------CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT----T--TCEEEEEEESCT-TS
T ss_pred             ------------CccCCCEEEECCceecC-----CCCHHHHhhhHHHHHHHHHHHHHh----C--CCcEEEeCChhh-cc
Confidence                        12579999999997632     234677899999999999998765    2  479999999886 22


Q ss_pred             cccc-CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc------hh
Q 017580          213 FNAQ-VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV------PS  285 (369)
Q Consensus       213 ~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~------~~  285 (369)
                      .... .....+.....  ..+..+...|+.||.+.+.+++..+.       .|++++++.||.|.++.....      ..
T Consensus       284 ~~~~~~~~~~~~E~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~gi~~~ilRp~~v~G~~~~~~~~~~~~~~  354 (508)
T 4f6l_B          284 YFDIDTEDVTFSEADV--YKGQLLTSPYTRSKFYSELKVLEAVN-------NGLDGRIVRVGNLTSPYNGRWHMRNIKTN  354 (508)
T ss_dssp             EECTTCSCCEECTTCS--CSSBCCCSHHHHHHHHHHHHHHHHHH-------TTCEEEEEEECCEESCSSSCCCCTTCTTC
T ss_pred             CCccCCcCcccccccc--cccccCCCcHHHHHHHHHHHHHHHHH-------cCCCEEEEecceeccCCCCCcccCCcchH
Confidence            1110 00000100000  01123567899999999999888652       479999999999977654332      00


Q ss_pred             -HHHHHHHHHH-H--Hh------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          286 -FLSLMAFTVL-K--LL------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       286 -~~~~~~~~~~-~--~~------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                       .......... .  +.      ..+..++|+|++++.++..+.  .|..|...++.++.
T Consensus       355 ~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~~s  412 (508)
T 4f6l_B          355 RFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNKMP  412 (508)
T ss_dssp             HHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC--SCSEEEESCSCEEE
T ss_pred             HHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC--CCCEEEeCCCCCCC
Confidence             1111110000 0  00      014568999999997665544  56667666666654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.70  E-value=2.3e-17  Score=150.33  Aligned_cols=193  Identities=9%  Similarity=-0.005  Sum_probs=129.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           65 VCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~--G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +++||||+|+||++++++|+++  |++|++++|++++.+.+.    .    ..+.++.+|++|++++.++++        
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~~~~~~~~--------   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A----QGITVRQADYGDEAALTSALQ--------   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H----TTCEEEECCTTCHHHHHHHTT--------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c----CCCeEEEcCCCCHHHHHHHHh--------
Confidence            3899999999999999999999  999999999987654432    1    257889999999987765433        


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                           .+|++||+||...              ..|+.++..+++++..    .+ .++||++||....            
T Consensus        65 -----~~d~vi~~a~~~~--------------~~~~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~------------  108 (286)
T 2zcu_A           65 -----GVEKLLLISSSEV--------------GQRAPQHRNVINAAKA----AG-VKFIAYTSLLHAD------------  108 (286)
T ss_dssp             -----TCSEEEECC----------------------CHHHHHHHHHHH----HT-CCEEEEEEETTTT------------
T ss_pred             -----CCCEEEEeCCCCc--------------hHHHHHHHHHHHHHHH----cC-CCEEEEECCCCCC------------
Confidence                 4899999999521              1366666666665533    22 4699999997654            


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-----HH
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-----KL  297 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-----~~  297 (369)
                              .   ....|+.+|.+.+.+++.          .++++++++||++.++.......   .......     ..
T Consensus       109 --------~---~~~~y~~sK~~~e~~~~~----------~~~~~~ilrp~~~~~~~~~~~~~---~~~~~~~~~~~~~~  164 (286)
T 2zcu_A          109 --------T---SPLGLADEHIETEKMLAD----------SGIVYTLLRNGWYSENYLASAPA---ALEHGVFIGAAGDG  164 (286)
T ss_dssp             --------T---CCSTTHHHHHHHHHHHHH----------HCSEEEEEEECCBHHHHHTTHHH---HHHHTEEEESCTTC
T ss_pred             --------C---CcchhHHHHHHHHHHHHH----------cCCCeEEEeChHHhhhhHHHhHH---hhcCCceeccCCCC
Confidence                    1   113699999999888753          26889999999987764321111   0000000     00


Q ss_pred             hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          298 LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      ...+.+++|+|+.++.++..+. ..|+.|...+++..
T Consensus       165 ~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          165 KIASATRADYAAAAARVISEAG-HEGKVYELAGDSAW  200 (286)
T ss_dssp             CBCCBCHHHHHHHHHHHHHSSS-CTTCEEEECCSSCB
T ss_pred             ccccccHHHHHHHHHHHhcCCC-CCCceEEEeCCCcC
Confidence            1235789999999997765533 35666666665544

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.69  E-value=3.5e-17  Score=150.37  Aligned_cols=205  Identities=13%  Similarity=-0.021  Sum_probs=131.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++++||||+|+||++++++|+++| ++|++++|++++...  +.+..    ..+.++.+|++|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------
Confidence            5789999999999999999999999 999999999765421  22222    257889999999988776543       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                            .+|++|||||.....          ..+.|+.++..++++    +++.+ .++||++||......         
T Consensus        72 ------~~d~vi~~a~~~~~~----------~~~~~~~~~~~~~~a----a~~~g-v~~iv~~S~~~~~~~---------  121 (299)
T 2wm3_A           72 ------GAYATFIVTNYWESC----------SQEQEVKQGKLLADL----ARRLG-LHYVVYSGLENIKKL---------  121 (299)
T ss_dssp             ------TCSEEEECCCHHHHT----------CHHHHHHHHHHHHHH----HHHHT-CSEEEECCCCCHHHH---------
T ss_pred             ------cCCEEEEeCCCCccc----------cchHHHHHHHHHHHH----HHHcC-CCEEEEEcCcccccc---------
Confidence                  389999999853211          133455555444444    44433 479999666443210         


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH--HHHHH--
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF--TVLKL--  297 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~--  297 (369)
                               ........|+.+|.+++.+.+.          .++++++++||++.+++...+.........  ....+  
T Consensus       122 ---------~~~~~~~~y~~sK~~~e~~~~~----------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  182 (299)
T 2wm3_A          122 ---------TAGRLAAAHFDGKGEVEEYFRD----------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTG  182 (299)
T ss_dssp             ---------TTTSCCCHHHHHHHHHHHHHHH----------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCT
T ss_pred             ---------CCCcccCchhhHHHHHHHHHHH----------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCC
Confidence                     0111235699999999887653          257899999999988764321100000000  00000  


Q ss_pred             --hhCCCCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017580          298 --LGLLQSPEKGINSVLDAALAPPETSGVYFFGG  329 (369)
Q Consensus       298 --~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~  329 (369)
                        ...+.+++|+|+.++.++..++...|+.|...
T Consensus       183 ~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~  216 (299)
T 2wm3_A          183 DVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLS  216 (299)
T ss_dssp             TSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECC
T ss_pred             CCccceecHHHHHHHHHHHHcChhhhCCeEEEee
Confidence              01346899999999987765332346666554

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.68  E-value=1.3e-15  Score=143.59  Aligned_cols=238  Identities=14%  Similarity=0.074  Sum_probs=149.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC-----CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREG-----FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G-----~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +++|+||||+|+||.+++++|+++|     ++|++++|+.....         ....++.++.+|++|.+++.++++   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~---   68 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLS---   68 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHT---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHh---
Confidence            4689999999999999999999999     99999999876432         113468899999999988776554   


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEE-------EEcCCccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV-------NVTSFTHR  210 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV-------~vsS~~~~  210 (369)
                             ...++|++||+||...       +..+..+++|+.++..+++++.+....   -.++|       ++||...+
T Consensus        69 -------~~~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~~---~~~~v~~~g~~i~~Ss~~vy  131 (364)
T 2v6g_A           69 -------PLTDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCPN---LKHISLQTGRKHYMGPFESY  131 (364)
T ss_dssp             -------TCTTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCTT---CCEEEEECCTHHHHCCGGGT
T ss_pred             -------cCCCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhccc---cceEEeccCceEEEechhhc
Confidence                   2234999999999752       245778999999999999998765221   24776       67876544


Q ss_pred             cccc---ccCCCcccccccccccCC-CchhhhhhhhHHHHHHHHHHHHHHhCCCCCCC-eEEEEecCCcccCCccccchh
Q 017580          211 NVFN---AQVNNETITGKFFLRSKC-YPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREVPS  285 (369)
Q Consensus       211 ~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~-i~v~~v~PG~v~T~~~~~~~~  285 (369)
                      ....   .++.++          .+ .+....|.    +.+.+++.++.      ..+ +++++++|+.+..+-......
T Consensus       132 g~~~~~~~~~~E~----------~~~~~~~~~y~----~~E~~~~~~~~------~~~~~~~~ilRp~~v~G~~~~~~~~  191 (364)
T 2v6g_A          132 GKIESHDPPYTED----------LPRLKYMNFYY----DLEDIMLEEVE------KKEGLTWSVHRPGNIFGFSPYSMMN  191 (364)
T ss_dssp             TTSCCCCSSBCTT----------SCCCSSCCHHH----HHHHHHHHHHT------TSTTCEEEEEEESSEECCCTTCSSC
T ss_pred             cccccCCCCCCcc----------ccCCccchhhH----HHHHHHHHHhh------cCCCceEEEECCCceeCCCCCcccc
Confidence            2211   111111          11 12233462    23444443332      345 999999999998765432211


Q ss_pred             H-HHH--HHHH---HHHHh------------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHH
Q 017580          286 F-LSL--MAFT---VLKLL------------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAG  347 (369)
Q Consensus       286 ~-~~~--~~~~---~~~~~------------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~  347 (369)
                      . ...  ....   ...+.            -...+.+|+|++++.++..+ ...|+.|+..++.+..          .+
T Consensus       192 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~-~~~g~~~ni~~~~~~s----------~~  260 (364)
T 2v6g_A          192 LVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP-YAKNEAFNVSNGDVFK----------WK  260 (364)
T ss_dssp             HHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG-GGTTEEEEECCSCCBC----------HH
T ss_pred             hHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCC-CCCCceEEecCCCcCC----------HH
Confidence            0 010  0100   00010            01234488999999766543 3356666666665544          44


Q ss_pred             HHHHHHHHhhhcc
Q 017580          348 ELWTTSCNLFINS  360 (369)
Q Consensus       348 ~lw~~~~~~~~~~  360 (369)
                      ++++...+.++..
T Consensus       261 e~~~~i~~~~g~~  273 (364)
T 2v6g_A          261 HFWKVLAEQFGVE  273 (364)
T ss_dssp             HHHHHHHHHHTCC
T ss_pred             HHHHHHHHHhCCC
Confidence            4666666666654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.68  E-value=1e-16  Score=146.50  Aligned_cols=197  Identities=13%  Similarity=0.123  Sum_probs=126.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      +|+||||+|+||++++++|+++ |++|++++|++++.....        ..++.++.+|++|++++.++++         
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--------~~~v~~~~~D~~d~~~l~~~~~---------   64 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--------RGKVSVRQLDYFNQESMVEAFK---------   64 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--------BTTBEEEECCTTCHHHHHHHTT---------
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--------hCCCEEEEcCCCCHHHHHHHHh---------
Confidence            4999999999999999999998 999999999987543221        3468999999999988766543         


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                          ++|++||+||...+            ...|+.++..+    ++.+++.+ -++||++||....             
T Consensus        65 ----~~d~vi~~a~~~~~------------~~~~~~~~~~l----~~aa~~~g-v~~iv~~Ss~~~~-------------  110 (289)
T 3e48_A           65 ----GMDTVVFIPSIIHP------------SFKRIPEVENL----VYAAKQSG-VAHIIFIGYYADQ-------------  110 (289)
T ss_dssp             ----TCSEEEECCCCCCS------------HHHHHHHHHHH----HHHHHHTT-CCEEEEEEESCCS-------------
T ss_pred             ----CCCEEEEeCCCCcc------------chhhHHHHHHH----HHHHHHcC-CCEEEEEcccCCC-------------
Confidence                48999999997532            12255555444    44445544 4799999996532             


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhh----
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG----  299 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----  299 (369)
                             ..    ..|..++...  +++   ..+.   ..+++++.++||++.+++.........  ......+.+    
T Consensus       111 -------~~----~~~~~~~~~~--~~e---~~~~---~~g~~~~ilrp~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~  169 (289)
T 3e48_A          111 -------HN----NPFHMSPYFG--YAS---RLLS---TSGIDYTYVRMAMYMDPLKPYLPELMN--MHKLIYPAGDGRI  169 (289)
T ss_dssp             -------TT----CCSTTHHHHH--HHH---HHHH---HHCCEEEEEEECEESTTHHHHHHHHHH--HTEECCCCTTCEE
T ss_pred             -------CC----CCCccchhHH--HHH---HHHH---HcCCCEEEEeccccccccHHHHHHHHH--CCCEecCCCCcee
Confidence                   11    1122233211  222   2222   457999999999998876422111000  000000111    


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          300 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      .+.+++|+|+.++.++..+... |+.|... +....
T Consensus       170 ~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~-~~~~s  203 (289)
T 3e48_A          170 NYITRNDIARGVIAIIKNPDTW-GKRYLLS-GYSYD  203 (289)
T ss_dssp             EEECHHHHHHHHHHHHHCGGGT-TCEEEEC-CEEEE
T ss_pred             eeEEHHHHHHHHHHHHcCCCcC-CceEEeC-CCcCC
Confidence            1468999999999876655433 6667666 66654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.67  E-value=4.3e-15  Score=139.32  Aligned_cols=215  Identities=10%  Similarity=0.004  Sum_probs=133.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.+++|+||||||+||++++++|+++|++|++++|+........+.+.... ..++.++.+|++|.+++.+++++     
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~~-----   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE-DKGAIIVYGLINEQEAMEKILKE-----   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHHH-----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH-hCCcEEEEeecCCHHHHHHHHhh-----
Confidence            345789999999999999999999999999999998722111111111111 24688999999999988877663     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                            .++|++||+||..                 |+.++..+++++...    +.-.++|. |+ .+.     ..+  
T Consensus        82 ------~~~d~Vi~~a~~~-----------------n~~~~~~l~~aa~~~----g~v~~~v~-S~-~g~-----~~~--  125 (346)
T 3i6i_A           82 ------HEIDIVVSTVGGE-----------------SILDQIALVKAMKAV----GTIKRFLP-SE-FGH-----DVN--  125 (346)
T ss_dssp             ------TTCCEEEECCCGG-----------------GGGGHHHHHHHHHHH----CCCSEEEC-SC-CSS-----CTT--
T ss_pred             ------CCCCEEEECCchh-----------------hHHHHHHHHHHHHHc----CCceEEee-cc-cCC-----CCC--
Confidence                  2599999999962                 777787777776543    11247764 43 222     000  


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-HHHHH----
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-AFTVL----  295 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~----  295 (369)
                              +..+.++...|+.+|.+++.+.+.          .++.++.++||++............... .....    
T Consensus       126 --------e~~~~~p~~~y~~sK~~~e~~l~~----------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g  187 (346)
T 3i6i_A          126 --------RADPVEPGLNMYREKRRVRQLVEE----------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYG  187 (346)
T ss_dssp             --------TCCCCTTHHHHHHHHHHHHHHHHH----------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEET
T ss_pred             --------ccCcCCCcchHHHHHHHHHHHHHH----------cCCCEEEEEecccccccCccccccccccCCCceEEEcc
Confidence                    013445667899999998776653          3678899999988775533221100000 00000    


Q ss_pred             --HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          296 --KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       296 --~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                        .....+.+++|+|+.++.++..++..++.|+..+.|..+.
T Consensus       188 ~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s  229 (346)
T 3i6i_A          188 DGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLN  229 (346)
T ss_dssp             TSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEC
T ss_pred             CCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCC
Confidence              0011356899999999976655433333444432344543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.66  E-value=2.8e-15  Score=141.87  Aligned_cols=191  Identities=14%  Similarity=0.042  Sum_probs=135.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      +|+||||+|+||++++++|+++|+ +|+..+|+                           +|.+++.++++   .     
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~---~-----   46 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL---K-----   46 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH---H-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc---c-----
Confidence            599999999999999999999998 88777664                           56677666654   2     


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                           +|++||+||...+      +..+..+++|+.++..+++++.    +.+...++|++||....             
T Consensus        47 -----~d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~-------------   98 (369)
T 3st7_A           47 -----ADFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQAT-------------   98 (369)
T ss_dssp             -----CSEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGG-------------
T ss_pred             -----CCEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhc-------------
Confidence                 8999999997643      3456678999999999988863    22212499999998765             


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHH--HHh--
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVL--KLL--  298 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~--~~~--  298 (369)
                             .    ...|+.||++.+.+++.++++.      +++++.+.|+.+..+..+.. ............  .+.  
T Consensus        99 -------~----~~~Y~~sK~~~E~~~~~~~~~~------g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (369)
T 3st7_A           99 -------Q----DNPYGESKLQGEQLLREYAEEY------GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV  161 (369)
T ss_dssp             -------S----CSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC
T ss_pred             -------C----CCCchHHHHHHHHHHHHHHHHh------CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe
Confidence                   1    4579999999999999998875      47789999999987654321 011111100000  000  


Q ss_pred             ------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          299 ------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                            ..+..++|+|++++.++..+....|..|...++.+..
T Consensus       162 ~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s  204 (369)
T 3st7_A          162 NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVT  204 (369)
T ss_dssp             SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEE
T ss_pred             cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCcee
Confidence                  0134689999999987766544336777777665554

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.66  E-value=1.8e-16  Score=144.49  Aligned_cols=221  Identities=6%  Similarity=-0.078  Sum_probs=141.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++|+|||| |+||.+++++|+++|++|++++|+.++.+...        ...+.++.+|++|.+                
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~----------------   60 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR--------ASGAEPLLWPGEEPS----------------   60 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH--------HTTEEEEESSSSCCC----------------
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh--------hCCCeEEEecccccc----------------
Confidence            68999998 99999999999999999999999987765443        136889999999843                


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-CCCCeEEEEcCCcccccccccCCCccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                        ..++|++||+||.....   .  .              .++.++..+++. .+.+++|++||...+.....       
T Consensus        61 --~~~~d~vi~~a~~~~~~---~--~--------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~-------  112 (286)
T 3ius_A           61 --LDGVTHLLISTAPDSGG---D--P--------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDG-------  112 (286)
T ss_dssp             --CTTCCEEEECCCCBTTB---C--H--------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTT-------
T ss_pred             --cCCCCEEEECCCccccc---c--H--------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCC-------
Confidence              13589999999975321   0  0              012333334331 11469999999765532211       


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH--HHHHHHHhhC
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM--AFTVLKLLGL  300 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~  300 (369)
                        ....+..+..+...|+.||.+.+.+++.+         .++++++++||.+..+............  ..........
T Consensus       113 --~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  181 (286)
T 3ius_A          113 --AWVDETTPLTPTAARGRWRVMAEQQWQAV---------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFS  181 (286)
T ss_dssp             --CEECTTSCCCCCSHHHHHHHHHHHHHHHS---------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBC
T ss_pred             --CCcCCCCCCCCCCHHHHHHHHHHHHHHhh---------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccc
Confidence              01111234455678999999999887765         2678999999999766432211100000  0000000113


Q ss_pred             CCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          301 LQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      +.+++|+|++++.++..+.  .|..|...++++..          .+++.+...+.++..
T Consensus       182 ~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~~~~s----------~~e~~~~i~~~~g~~  229 (286)
T 3ius_A          182 RIHVEDIAQVLAASMARPD--PGAVYNVCDDEPVP----------PQDVIAYAAELQGLP  229 (286)
T ss_dssp             EEEHHHHHHHHHHHHHSCC--TTCEEEECCSCCBC----------HHHHHHHHHHHHTCC
T ss_pred             eEEHHHHHHHHHHHHhCCC--CCCEEEEeCCCCcc----------HHHHHHHHHHHcCCC
Confidence            4678999999997765554  56666666666654          344566666666554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.66  E-value=2.6e-16  Score=144.87  Aligned_cols=199  Identities=13%  Similarity=0.099  Sum_probs=122.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-------chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-------HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-------~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+.+ +++..    ..+.++.+|++|.+++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~----~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS----LGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH----TTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh----CCCEEEEeCCCCHHHHHHHHh-
Confidence            46799999999999999999999999999999987       333332 23322    357889999999988766543 


Q ss_pred             HHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                                  ++|++||+||...                 +.++..+++++    ++.+.-+++|  .|..+...   
T Consensus        76 ------------~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~---  117 (307)
T 2gas_A           76 ------------QVDIVICAAGRLL-----------------IEDQVKIIKAI----KEAGNVKKFF--PSEFGLDV---  117 (307)
T ss_dssp             ------------TCSEEEECSSSSC-----------------GGGHHHHHHHH----HHHCCCSEEE--CSCCSSCT---
T ss_pred             ------------CCCEEEECCcccc-----------------cccHHHHHHHH----HhcCCceEEe--ecccccCc---
Confidence                        3899999999642                 22333444443    3321125776  34333200   


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH------HH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL------SL  289 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~------~~  289 (369)
                        +.         .....|....| .+|++++.+.+.          .+++++.++||++.+++........      ..
T Consensus       118 --~~---------~~~~~p~~~~y-~sK~~~e~~~~~----------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~  175 (307)
T 2gas_A          118 --DR---------HDAVEPVRQVF-EEKASIRRVIEA----------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDK  175 (307)
T ss_dssp             --TS---------CCCCTTHHHHH-HHHHHHHHHHHH----------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSE
T ss_pred             --cc---------ccCCCcchhHH-HHHHHHHHHHHH----------cCCCeEEEEcceeeccccccccccccccCCCCe
Confidence              00         00223456789 999998877642          2577889999999876543211100      00


Q ss_pred             HH-HHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeC
Q 017580          290 MA-FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFG  328 (369)
Q Consensus       290 ~~-~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~  328 (369)
                      .. .........+.+++|+|+.++.++..+. ..|+.++.
T Consensus       176 ~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~  214 (307)
T 2gas_A          176 VVILGDGNVKGAYVTEADVGTFTIRAANDPN-TLNKAVHI  214 (307)
T ss_dssp             EEEETTSCSEEEEECHHHHHHHHHHHHTCGG-GTTEEEEC
T ss_pred             EEEecCCCcceEEeeHHHHHHHHHHHHcCcc-ccCceEEE
Confidence            00 0000001134689999999997765433 33444433

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.64  E-value=7.6e-16  Score=152.25  Aligned_cols=218  Identities=11%  Similarity=0.031  Sum_probs=138.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +++|+||||+|+||.+++++|+++|++|++++|+.++.                ..+.+|+.+..         .+    
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~~---------~~----  197 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNPA---------SD----  197 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSCC---------TT----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccchh---------HH----
Confidence            57899999999999999999999999999999987642                12567776431         11    


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                        ...++|+|||+||..... ..+.+..+..+++|+.++..+++++.   ++.+ .+++|++||...+......      
T Consensus       198 --~l~~~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~-~~r~V~~SS~~vyg~~~~~------  264 (516)
T 3oh8_A          198 --LLDGADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVA---ESTQ-CTTMISASAVGFYGHDRGD------  264 (516)
T ss_dssp             --TTTTCSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS-CCEEEEEEEGGGGCSEEEE------
T ss_pred             --hcCCCCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHH---hcCC-CCEEEEeCcceEecCCCCC------
Confidence              345799999999975332 45667788899999999999999743   2222 4699999997765311000      


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh----
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL----  298 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----  298 (369)
                        ..+.+..+. +...|+.+|...+.+.+...       ..|++++++.||.+.++-....+..............    
T Consensus       265 --~~~~E~~~~-~~~~y~~~~~~~E~~~~~~~-------~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~  334 (516)
T 3oh8_A          265 --EILTEESES-GDDFLAEVCRDWEHATAPAS-------DAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGT  334 (516)
T ss_dssp             --EEECTTSCC-CSSHHHHHHHHHHHTTHHHH-------HTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSC
T ss_pred             --CccCCCCCC-CcChHHHHHHHHHHHHHHHH-------hCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCC
Confidence              001111222 45578888888776544332       4689999999999988753111111000000000000    


Q ss_pred             --hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          299 --GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       299 --~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                        ..+..++|+|++++.++..+. ..|.|.. .++.++
T Consensus       335 ~~~~~i~v~Dva~ai~~~l~~~~-~~g~~ni-~~~~~~  370 (516)
T 3oh8_A          335 SWFSWIAIDDLTDIYYRAIVDAQ-ISGPINA-VAPNPV  370 (516)
T ss_dssp             CEECEEEHHHHHHHHHHHHHCTT-CCEEEEE-SCSCCE
T ss_pred             ceEceEeHHHHHHHHHHHHhCcc-cCCcEEE-ECCCCC
Confidence              124578999999997665543 4566544 334444

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.58  E-value=3.5e-15  Score=137.65  Aligned_cols=210  Identities=9%  Similarity=0.048  Sum_probs=124.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-----hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-----~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++|+||||||+||.+++++|+++|++|++++|+..     +.+. .+++.    ...+.++.+|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK----QLGAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH----TTTCEEECCCSSCHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH----hCCeEEEeCCCCCHHHHHHHHh---
Confidence            357999999999999999999999999999999853     2222 12221    3457899999999988776543   


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                                ++|++||+||.....             .|+.++..+++++    ++.+.-++||+  |..+...  ...
T Consensus        76 ----------~~d~vi~~a~~~~~~-------------~~~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~--~~~  124 (313)
T 1qyd_A           76 ----------QVDVVISALAGGVLS-------------HHILEQLKLVEAI----KEAGNIKRFLP--SEFGMDP--DIM  124 (313)
T ss_dssp             ----------TCSEEEECCCCSSSS-------------TTTTTHHHHHHHH----HHSCCCSEEEC--SCCSSCT--TSC
T ss_pred             ----------CCCEEEECCccccch-------------hhHHHHHHHHHHH----HhcCCCceEEe--cCCcCCc--ccc
Confidence                      389999999975321             2555665555554    33321358874  3333210  000


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-------HHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-------LSLM  290 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-------~~~~  290 (369)
                           .      ....+....| .+|.+++.+.+    +      .+++++.++||++.+++.......       ....
T Consensus       125 -----~------~~~~p~~~~y-~sK~~~e~~~~----~------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~  182 (313)
T 1qyd_A          125 -----E------HALQPGSITF-IDKRKVRRAIE----A------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKV  182 (313)
T ss_dssp             -----C------CCCSSTTHHH-HHHHHHHHHHH----H------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEE
T ss_pred             -----c------cCCCCCcchH-HHHHHHHHHHH----h------cCCCeEEEEeceeccccccccccccccccCCCCeE
Confidence                 0      0112345678 99999887664    2      357788889998865432211100       0000


Q ss_pred             HHH-HHHHhhCCCCHHHHHHHHHHHhcCCCCCccc-EEeCCCCccc
Q 017580          291 AFT-VLKLLGLLQSPEKGINSVLDAALAPPETSGV-YFFGGKGRTV  334 (369)
Q Consensus       291 ~~~-~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~-~~~~~~g~~~  334 (369)
                      ... .......+.+++|+|+.++.++..+. ..|+ |+..+.+...
T Consensus       183 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~~g~~~~~  227 (313)
T 1qyd_A          183 LIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-TLNKTMYIRPPMNIL  227 (313)
T ss_dssp             CCBTTSCSEEEEECHHHHHHHHHHHTTCGG-GSSSEEECCCGGGEE
T ss_pred             EEeCCCCceEEEEEHHHHHHHHHHHHhCcc-cCCceEEEeCCCCcc
Confidence            000 00001134689999999997665433 2344 4443333433

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.58  E-value=1.6e-15  Score=140.62  Aligned_cols=201  Identities=8%  Similarity=0.008  Sum_probs=119.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-c----hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-H----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~----~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .++++||||+|+||.+++++|+++|++|++++|+. .    ...+..+++.    ...+.++.+|++|.+++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~----~~~v~~v~~D~~d~~~l~~a~~---   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR----SMGVTIIEGEMEEHEKMVSVLK---   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh----cCCcEEEEecCCCHHHHHHHHc---
Confidence            35799999999999999999999999999999986 2    1112222222    2357899999999988776543   


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                                .+|++||+||...                 +.++..++++    +++.+.-++||  .|..+...     
T Consensus        77 ----------~~d~vi~~a~~~~-----------------~~~~~~l~~a----a~~~g~v~~~v--~S~~g~~~-----  118 (321)
T 3c1o_A           77 ----------QVDIVISALPFPM-----------------ISSQIHIINA----IKAAGNIKRFL--PSDFGCEE-----  118 (321)
T ss_dssp             ----------TCSEEEECCCGGG-----------------SGGGHHHHHH----HHHHCCCCEEE--CSCCSSCG-----
T ss_pred             ----------CCCEEEECCCccc-----------------hhhHHHHHHH----HHHhCCccEEe--ccccccCc-----
Confidence                      3899999999642                 2233333333    33321125777  34333200     


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-------HHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------FLSLM  290 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-------~~~~~  290 (369)
                      + +   .     ....+....| .+|++++.+.+.    .      +++++.++||++.++.......       .....
T Consensus       119 ~-~---~-----~~~~p~~~~y-~sK~~~e~~~~~----~------~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~  178 (321)
T 3c1o_A          119 D-R---I-----KPLPPFESVL-EKKRIIRRAIEA----A------ALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIV  178 (321)
T ss_dssp             G-G---C-----CCCHHHHHHH-HHHHHHHHHHHH----H------TCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEE
T ss_pred             c-c---c-----ccCCCcchHH-HHHHHHHHHHHH----c------CCCeEEEEeceeccccccccccccccccccCceE
Confidence            0 0   0     0122336789 999999887752    2      4667788999886543211000       00000


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  329 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~  329 (369)
                      ..........+.+++|+|+.++.++..+. ..|+.++..
T Consensus       179 ~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~  216 (321)
T 3c1o_A          179 IYGTGETKFVLNYEEDIAKYTIKVACDPR-CCNRIVIYR  216 (321)
T ss_dssp             EETTSCCEEEEECHHHHHHHHHHHHHCGG-GTTEEEECC
T ss_pred             EecCCCcceeEeeHHHHHHHHHHHHhCcc-ccCeEEEEe
Confidence            00000001134689999999998766543 335544433

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.56  E-value=2e-15  Score=139.78  Aligned_cols=190  Identities=8%  Similarity=0.058  Sum_probs=114.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++++||||+|+||.+++++|+++|++|++++|+.+...+..+++..    ..+.++.+|++|.+++.++++         
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~~~l~~a~~---------   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEHEKLVELMK---------   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT---------
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCHHHHHHHHc---------
Confidence            5799999999999999999999999999999987522222223322    357889999999988776543         


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                          .+|++||+||...                 +.++..++    +.+++.+.-+++|+ |+ .+...     +..   
T Consensus        79 ----~~d~vi~~a~~~~-----------------~~~~~~l~----~aa~~~g~v~~~v~-S~-~g~~~-----~~~---  123 (318)
T 2r6j_A           79 ----KVDVVISALAFPQ-----------------ILDQFKIL----EAIKVAGNIKRFLP-SD-FGVEE-----DRI---  123 (318)
T ss_dssp             ----TCSEEEECCCGGG-----------------STTHHHHH----HHHHHHCCCCEEEC-SC-CSSCT-----TTC---
T ss_pred             ----CCCEEEECCchhh-----------------hHHHHHHH----HHHHhcCCCCEEEe-ec-cccCc-----ccc---
Confidence                3899999998632                 22233333    33333221357773 33 32200     000   


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----HHHHHHHHHHHhh
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----LSLMAFTVLKLLG  299 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~  299 (369)
                            ....+....| .+|.+++.+.+.          .++.++.++||++..++.......    .............
T Consensus       124 ------~~~~p~~~~y-~sK~~~e~~~~~----------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (318)
T 2r6j_A          124 ------NALPPFEALI-ERKRMIRRAIEE----------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKF  186 (318)
T ss_dssp             ------CCCHHHHHHH-HHHHHHHHHHHH----------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEE
T ss_pred             ------cCCCCcchhH-HHHHHHHHHHHh----------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCcee
Confidence                  0122335678 999998877642          256778889998755432110000    0000000000011


Q ss_pred             CCCCHHHHHHHHHHHhcCC
Q 017580          300 LLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~~  318 (369)
                      .+.+++|+|+.++.++..+
T Consensus       187 ~~i~~~Dva~~~~~~l~~~  205 (318)
T 2r6j_A          187 AMNYEQDIGLYTIKVATDP  205 (318)
T ss_dssp             EEECHHHHHHHHHHHTTCG
T ss_pred             eEeeHHHHHHHHHHHhcCc
Confidence            2468999999999766543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.56  E-value=4.6e-14  Score=132.72  Aligned_cols=202  Identities=14%  Similarity=0.009  Sum_probs=127.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEec-CCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD-LSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D-ls~~~~i~~~~~~i~~~~  140 (369)
                      ++++++||||||+||++++++|+++|++|++++|+.++..  .+.+..   ..++.++.+| ++|.+++.++++      
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~------   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE------   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh------
Confidence            3578999999999999999999999999999999987642  122322   2368889999 999988776543      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc-cccccccCCC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH-RNVFNAQVNN  219 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~-~~~~~~~~~~  219 (369)
                             .+|++|||++...             .+.|..+ ..+++++    ++.+.-++||++||... .         
T Consensus        73 -------~~d~Vi~~a~~~~-------------~~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~---------  118 (352)
T 1xgk_A           73 -------GAHLAFINTTSQA-------------GDEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSL---------  118 (352)
T ss_dssp             -------TCSEEEECCCSTT-------------SCHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGG---------
T ss_pred             -------cCCEEEEcCCCCC-------------cHHHHHH-HHHHHHH----HHcCCccEEEEeCCccccc---------
Confidence                   3799999987531             1235544 4444443    33210269999999762 2         


Q ss_pred             cccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-------HHHHHHH
Q 017580          220 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------FLSLMAF  292 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-------~~~~~~~  292 (369)
                                 .+.+....|+.||++.+.+++.          .++++++++||++-++.......       .......
T Consensus       119 -----------~~~~~~~~y~~sK~~~E~~~~~----------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~  177 (352)
T 1xgk_A          119 -----------YGPWPAVPMWAPKFTVENYVRQ----------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEW  177 (352)
T ss_dssp             -----------TSSCCCCTTTHHHHHHHHHHHT----------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEE
T ss_pred             -----------cCCCCCccHHHHHHHHHHHHHH----------cCCCEEEEecceecCCchhcccccccccccCCCceEE
Confidence                       1112235799999999888753          26789999999875543321000       0000000


Q ss_pred             H-HH--HHhhCCCCH-HHHHHHHHHHhcCCC-CCcccEEeCC
Q 017580          293 T-VL--KLLGLLQSP-EKGINSVLDAALAPP-ETSGVYFFGG  329 (369)
Q Consensus       293 ~-~~--~~~~~~~~~-~e~A~~v~~~~l~~~-~~sG~~~~~~  329 (369)
                      . ..  .....+.++ +|+|+.++.++..++ ...|+.|...
T Consensus       178 ~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~  219 (352)
T 1xgk_A          178 HAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT  219 (352)
T ss_dssp             EESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC
T ss_pred             eeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEe
Confidence            0 00  000124577 899999997765432 2235555444

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.56  E-value=4.8e-15  Score=136.41  Aligned_cols=202  Identities=15%  Similarity=0.115  Sum_probs=117.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchH--HHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLL--SETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~--~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .++|+||||+|+||.+++++|+++|++|++++|+....  .+..+.+... ....+.++.+|++|.+++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHc------
Confidence            36799999999999999999999999999999985432  1111112111 13467899999999988776554      


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                             ++|++||+||...                 +.++..++++    +++.+.-+++|. |+ .+..     .+..
T Consensus        77 -------~~d~vi~~a~~~~-----------------~~~~~~l~~a----a~~~g~v~~~v~-S~-~g~~-----~~~~  121 (308)
T 1qyc_A           77 -------NVDVVISTVGSLQ-----------------IESQVNIIKA----IKEVGTVKRFFP-SE-FGND-----VDNV  121 (308)
T ss_dssp             -------TCSEEEECCCGGG-----------------SGGGHHHHHH----HHHHCCCSEEEC-SC-CSSC-----TTSC
T ss_pred             -------CCCEEEECCcchh-----------------hhhHHHHHHH----HHhcCCCceEee-cc-cccC-----cccc
Confidence                   2899999998632                 2223333343    333221357773 43 3220     0000


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH------HHHH-HH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL------SLMA-FT  293 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~------~~~~-~~  293 (369)
                               ....+....| .+|++++.+.+.    .      +++++.++||++.+++........      .... ..
T Consensus       122 ---------~~~~p~~~~y-~sK~~~e~~~~~----~------~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (308)
T 1qyc_A          122 ---------HAVEPAKSVF-EVKAKVRRAIEA----E------GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILG  181 (308)
T ss_dssp             ---------CCCTTHHHHH-HHHHHHHHHHHH----H------TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEET
T ss_pred             ---------ccCCcchhHH-HHHHHHHHHHHh----c------CCCeEEEEeceeccccccccccccccCCCCCceEEec
Confidence                     0223445688 999998877653    2      466788899987654322110000      0000 00


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                      .......+.+++|+|+.++.++..+ ...|+.++
T Consensus       182 ~~~~~~~~i~~~Dva~~~~~~l~~~-~~~~~~~~  214 (308)
T 1qyc_A          182 DGNARVVFVKEEDIGTFTIKAVDDP-RTLNKTLY  214 (308)
T ss_dssp             TSCCEEEEECHHHHHHHHHTTSSCG-GGTTEEEE
T ss_pred             CCCceEEEecHHHHHHHHHHHHhCc-cccCeEEE
Confidence            0000113468899999999654433 22344443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.47  E-value=1e-12  Score=120.31  Aligned_cols=215  Identities=17%  Similarity=0.069  Sum_probs=127.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      .|+||||||.||++++++|.++|++|++++|++..              ..+   ..|     .+   .   .+      
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~---~~~-----~~---~---~~------   47 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRI---TWD-----EL---A---AS------   47 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEE---EHH-----HH---H---HH------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Cee---ecc-----hh---h---Hh------
Confidence            48999999999999999999999999999997642              111   111     11   0   11      


Q ss_pred             CCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          145 MHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       145 ~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                      ....+|.+||.||..  .+....+.+..+..+++|+.++-.+.+.+...-  .+ ..++|+.||...+.........+  
T Consensus        48 ~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~--~~-~~~~i~~Ss~~vyg~~~~~~~~E--  122 (298)
T 4b4o_A           48 GLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP--QP-PKAWVLVTGVAYYQPSLTAEYDE--  122 (298)
T ss_dssp             CCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS--SC-CSEEEEEEEGGGSCCCSSCCBCT--
T ss_pred             hccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC--CC-ceEEEEEeeeeeecCCCCCcccc--
Confidence            346799999999853  333445677778889999999888877653331  11 34677778766653322111111  


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh----
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL----  298 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----  298 (369)
                             ..+..+...|+.+|...+..     ....   ..++++..+.||.|..+-.................+.    
T Consensus       123 -------~~p~~~~~~~~~~~~~~e~~-----~~~~---~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~  187 (298)
T 4b4o_A          123 -------DSPGGDFDFFSNLVTKWEAA-----ARLP---GDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGH  187 (298)
T ss_dssp             -------TCCCSCSSHHHHHHHHHHHH-----HCCS---SSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSC
T ss_pred             -------cCCccccchhHHHHHHHHHH-----HHhh---ccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccC
Confidence                   13344444566655544321     1222   6789999999999987643211111100000000000    


Q ss_pred             --hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          299 --GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 --~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                        ..+...+|+|++++.++.. +...|.| +..+++++.
T Consensus       188 ~~~~~ihv~Dva~a~~~~~~~-~~~~g~y-n~~~~~~~t  224 (298)
T 4b4o_A          188 QFFPWIHIGDLAGILTHALEA-NHVHGVL-NGVAPSSAT  224 (298)
T ss_dssp             SBCCEEEHHHHHHHHHHHHHC-TTCCEEE-EESCSCCCB
T ss_pred             ceeecCcHHHHHHHHHHHHhC-CCCCCeE-EEECCCccC
Confidence              0125689999999865544 3445654 445555554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.31  E-value=6.7e-13  Score=121.16  Aligned_cols=107  Identities=16%  Similarity=0.168  Sum_probs=83.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+++||||+||||+++++.|+++|++|++++|+.++++++.+++....   .+.++.+|++++++++++++     
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~~~~~~~~~-----  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAVK-----  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHTT-----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCHHHHHHHHH-----
Confidence            4678999999999999999999999999999999999988888888775531   35678899999887665433     


Q ss_pred             HhccCCCCCccEEEecccccc-CC--CCCCH-HhHHHhhhhhhHHHH
Q 017580          140 LLDSDMHSSIQLLINNAGILA-TS--SRLTP-EGYDQMMSTNYIGAF  182 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~-~~--~~~~~-~~~~~~~~vN~~~~~  182 (369)
                              .+|++|||||+.. +.  .+.+. +.++..+++|+.+++
T Consensus       188 --------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 --------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             --------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             --------hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence                    3899999998642 11  12232 555668888888876

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.04  E-value=4.2e-10  Score=104.46  Aligned_cols=172  Identities=9%  Similarity=0.047  Sum_probs=109.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      ..++||||+|.||..++..|+++|.       +|+++++++  ++.+....++...  ...  ++ .|+.+.+++.+.+ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~--~~-~di~~~~~~~~a~-   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFP--LL-AGLEATDDPKVAF-   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCT--TE-EEEEEESCHHHHT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--ccc--cc-CCeEeccChHHHh-
Confidence            4699999999999999999999996       899999875  2333333344321  111  12 4665544433221 


Q ss_pred             HHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                                  ...|++||.||..... ..   ...+.+++|+.++..+++.+...-  .. ..+++++|+....... 
T Consensus        79 ------------~~~D~Vih~Ag~~~~~-~~---~~~~~~~~Nv~~t~~l~~a~~~~~--~~-~~~vvv~snp~~~~~~-  138 (327)
T 1y7t_A           79 ------------KDADYALLVGAAPRKA-GM---ERRDLLQVNGKIFTEQGRALAEVA--KK-DVKVLVVGNPANTNAL-  138 (327)
T ss_dssp             ------------TTCSEEEECCCCCCCT-TC---CHHHHHHHHHHHHHHHHHHHHHHS--CT-TCEEEECSSSHHHHHH-
T ss_pred             ------------CCCCEEEECCCcCCCC-CC---CHHHHHHHHHHHHHHHHHHHHhhc--CC-CeEEEEeCCchhhhHH-
Confidence                        3489999999986322 22   235679999999999998876652  11 3688888876521110 


Q ss_pred             ccCCCcccccccccccC-CCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeE-EEEecCC
Q 017580          215 AQVNNETITGKFFLRSK-CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS-VIAADPG  273 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~-~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~-v~~v~PG  273 (369)
                        ..         .+.. +.++...|+.||...+.+.+.+++.+..+ ...++ .+++-|+
T Consensus       139 --~~---------~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~-~~~vr~~~V~G~h  187 (327)
T 1y7t_A          139 --IA---------YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTG-VDRIRRMTVWGNH  187 (327)
T ss_dssp             --HH---------HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCC-GGGEECCEEEBCS
T ss_pred             --HH---------HHHcCCCChhheeccchHHHHHHHHHHHHHhCcC-hhheeeeEEEcCC
Confidence              00         0001 34556679999999999999888876532 23444 2444453

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.02  E-value=5.4e-10  Score=97.08  Aligned_cols=78  Identities=21%  Similarity=0.278  Sum_probs=59.3

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecC
Q 017580           60 GIKRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL  123 (369)
Q Consensus        60 ~~~~k~vlITGa----------------s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl  123 (369)
                      +++||+|+||||                |||||.++|++|+++|++|++++++.. ++       .   ...+  -.+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-------~---~~g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-------T---PPFV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-------C---CTTE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-------c---CCCC--eEEcc
Confidence            578999999999                689999999999999999999988652 11       0   1122  24677


Q ss_pred             CChHHHHHHHHHHHHHHhccCCCCCccEEEeccccc
Q 017580          124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       124 s~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                      ++.++   +.+.+.+      .++++|++|||||+.
T Consensus        72 ~~~~~---~~~~v~~------~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           72 MTALE---MEAAVNA------SVQQQNIFIGCAAVA   98 (226)
T ss_dssp             CSHHH---HHHHHHH------HGGGCSEEEECCBCC
T ss_pred             CcHHH---HHHHHHH------hcCCCCEEEECCccc
Confidence            77544   5555655      357799999999986

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.83  E-value=1.9e-09  Score=93.88  Aligned_cols=78  Identities=19%  Similarity=0.256  Sum_probs=57.0

Q ss_pred             CCCEEEEeCC----------------CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           62 KRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        62 ~~k~vlITGa----------------s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      +||+|+||||                ||++|.++|++++++|++|++++|+....        ... ...+..  .|+  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~--------~~~-~~~~~~--~~v--   68 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK--------PEP-HPNLSI--REI--   68 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC--------CCC-CTTEEE--EEC--
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccC-CCCeEE--EEH--
Confidence            4899999999                77899999999999999999999975310        000 112322  333  


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCccEEEeccccc
Q 017580          126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       126 ~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                       +++.++.+.+.+      .++++|++|+|||+.
T Consensus        69 -~s~~em~~~v~~------~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           69 -TNTKDLLIEMQE------RVQDYQVLIHSMAVS   95 (232)
T ss_dssp             -CSHHHHHHHHHH------HGGGCSEEEECSBCC
T ss_pred             -hHHHHHHHHHHH------hcCCCCEEEEcCccc
Confidence             456666777776      346799999999986

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.79  E-value=1e-08  Score=87.85  Aligned_cols=103  Identities=14%  Similarity=0.095  Sum_probs=71.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++||||+||||.++++.+...|++|++++|++++.+.+.    +.  +..   ..+|.++.+..+.+.+..     
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~--g~~---~~~d~~~~~~~~~~~~~~-----  103 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL--GVE---YVGDSRSVDFADEILELT-----  103 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT--CCS---EEEETTCSTHHHHHHHHT-----
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc--CCC---EEeeCCcHHHHHHHHHHh-----
Confidence            4789999999999999999999999999999999977654432    22  222   235777755433332221     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                         ..+++|++|+|+|.         +.               .+..++.++.   .|++|.+++..
T Consensus       104 ---~~~~~D~vi~~~g~---------~~---------------~~~~~~~l~~---~G~~v~~g~~~  140 (198)
T 1pqw_A          104 ---DGYGVDVVLNSLAG---------EA---------------IQRGVQILAP---GGRFIELGKKD  140 (198)
T ss_dssp             ---TTCCEEEEEECCCT---------HH---------------HHHHHHTEEE---EEEEEECSCGG
T ss_pred             ---CCCCCeEEEECCch---------HH---------------HHHHHHHhcc---CCEEEEEcCCC
Confidence               12469999999972         11               2344555544   48999999854

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.74  E-value=2.9e-08  Score=77.11  Aligned_cols=74  Identities=20%  Similarity=0.173  Sum_probs=60.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++++|+|+ |++|.++++.|.+.| ++|++++|++++.+.+.        ...+..+.+|+++.+++.+.+        
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~--------   67 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKAL--------   67 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHT--------
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHH--------
Confidence            578999999 999999999999999 89999999987766543        234677899999987665543        


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                           ..+|++|+++|.
T Consensus        68 -----~~~d~vi~~~~~   79 (118)
T 3ic5_A           68 -----GGFDAVISAAPF   79 (118)
T ss_dssp             -----TTCSEEEECSCG
T ss_pred             -----cCCCEEEECCCc
Confidence                 248999999963

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.71  E-value=1.6e-10  Score=111.03  Aligned_cols=132  Identities=14%  Similarity=0.144  Sum_probs=77.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH------hhcCCCcEEEEEecCCChHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT------SRNKDARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~------~~~~~~~v~~~~~Dls~~~~i~~~~  133 (369)
                      ++.||+|+|||++ +||+++|+.|+..|++|+++++++.+..++.....      +......+.+...  ...+-+..  
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~at--G~~~vl~~--  336 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTT--GNKDIIML--  336 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECS--SCSCSBCH--
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCC--CChhhhhH--
Confidence            4689999999998 99999999999999999999999877665543310      0011112222111  11111110  


Q ss_pred             HHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHh-------hhhhhHHHHHHH-HHHhHhhhcCCCCCeEEEEc
Q 017580          134 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM-------MSTNYIGAFFLT-KLLLPLLKNSPVPSRIVNVT  205 (369)
Q Consensus       134 ~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~-------~~vN~~~~~~l~-~~~~~~~~~~~~~g~IV~vs  205 (369)
                       +..       ..-+.+.+|+|+|..  ..+.+.+.++..       +..|+.+.++.. +..++.|.    .|||||+|
T Consensus       337 -e~l-------~~mk~gaiVvNaG~~--~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLa----eGRIVNls  402 (488)
T 3ond_A          337 -DHM-------KKMKNNAIVCNIGHF--DNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILA----EGRLMNLG  402 (488)
T ss_dssp             -HHH-------TTSCTTEEEEESSST--TTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEG----GGSCHHHH
T ss_pred             -HHH-------HhcCCCeEEEEcCCC--CcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHc----CCcEEEEe
Confidence             011       123457788888864  334555555543       233433332222 23333333    38999999


Q ss_pred             CCccc
Q 017580          206 SFTHR  210 (369)
Q Consensus       206 S~~~~  210 (369)
                      |..|+
T Consensus       403 S~~G~  407 (488)
T 3ond_A          403 CATGH  407 (488)
T ss_dssp             HSCCS
T ss_pred             cCccc
Confidence            98877

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.64  E-value=2.8e-08  Score=81.94  Aligned_cols=76  Identities=14%  Similarity=0.082  Sum_probs=61.8

Q ss_pred             chHHHHHHHHHHCCCEEEEEeCCcchHH---HHHHHHHhhcCCCcEEEEEecCCCh--HHHHHHHHHHHHHHhccCCCCC
Q 017580           74 GLGAAAAYALSREGFHVVLVGRSSHLLS---ETMADITSRNKDARLEAFQVDLSSF--QSVLKFKDSLQQWLLDSDMHSS  148 (369)
Q Consensus        74 gIG~~~a~~La~~G~~Vvl~~r~~~~~~---~~~~~~~~~~~~~~v~~~~~Dls~~--~~i~~~~~~i~~~~~~~~~~~~  148 (369)
                      -++.+.++.|++.|++|++..|+.....   +..+.+++.  +.+...+++|++++  ++++++++.+.+      .+++
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~------~~G~   98 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQ------HKGK   98 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHH------TTTS
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHh------cCCC
Confidence            4789999999999999999988755432   233444433  56788899999999  999999999987      6788


Q ss_pred             ccEEEecccc
Q 017580          149 IQLLINNAGI  158 (369)
Q Consensus       149 id~lv~nAG~  158 (369)
                       |+||||||+
T Consensus        99 -dVLVnnAgg  107 (157)
T 3gxh_A           99 -DVLVHCLAN  107 (157)
T ss_dssp             -CEEEECSBS
T ss_pred             -CEEEECCCC
Confidence             999999996

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.62  E-value=1.3e-07  Score=90.23  Aligned_cols=82  Identities=20%  Similarity=0.298  Sum_probs=70.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC---CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G---~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.|+|+|| ||||+++++.|++.|   .+|++++|+.++++++.+++.... +.++..+.+|+++.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            46899999 899999999999998   499999999999999888876543 246889999999999998887753    


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                             ++|+||||+|.
T Consensus        76 -------~~DvVin~ag~   86 (405)
T 4ina_A           76 -------KPQIVLNIALP   86 (405)
T ss_dssp             -------CCSEEEECSCG
T ss_pred             -------CCCEEEECCCc
Confidence                   48999999985

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.62  E-value=1.2e-07  Score=88.62  Aligned_cols=104  Identities=13%  Similarity=0.080  Sum_probs=76.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++||||+||||.++++.+...|++|++++|++++.+.+. ++     +..   ..+|.++.+++.+.+.++..   
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~-----g~~---~~~d~~~~~~~~~~~~~~~~---  236 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SI-----GGE---VFIDFTKEKDIVGAVLKATD---  236 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HT-----TCC---EEEETTTCSCHHHHHHHHHT---
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-Hc-----CCc---eEEecCccHhHHHHHHHHhC---
Confidence            3789999999999999999999999999999999988765432 22     222   23588866666666655442   


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                           +++|++|+|+|..        +               .++..++.++.   .|++|.+++..
T Consensus       237 -----~~~D~vi~~~g~~--------~---------------~~~~~~~~l~~---~G~iv~~g~~~  272 (347)
T 2hcy_A          237 -----GGAHGVINVSVSE--------A---------------AIEASTRYVRA---NGTTVLVGMPA  272 (347)
T ss_dssp             -----SCEEEEEECSSCH--------H---------------HHHHHTTSEEE---EEEEEECCCCT
T ss_pred             -----CCCCEEEECCCcH--------H---------------HHHHHHHHHhc---CCEEEEEeCCC
Confidence                 2799999999841        1               23555566644   48999998854

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.61  E-value=7.4e-09  Score=102.05  Aligned_cols=97  Identities=21%  Similarity=0.273  Sum_probs=65.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|+++|||| ||+|+++++.|++.|++|++++|+.++++++.+++     +.++.    ++.+.+          + 
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~----~~~dl~----------~-  419 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKAL----SLTDLD----------N-  419 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CE----ETTTTT----------T-
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCcee----eHHHhh----------h-
Confidence            367899999999 59999999999999999999999998888776665     12221    222210          0 


Q ss_pred             HhccCCCCCccEEEecccccc-------CCCCCCHHhHHHhhhhhhHHH
Q 017580          140 LLDSDMHSSIQLLINNAGILA-------TSSRLTPEGYDQMMSTNYIGA  181 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~-------~~~~~~~~~~~~~~~vN~~~~  181 (369)
                      +    ....+|++|||+|+..       +..+.+.+.+...+++|+.+.
T Consensus       420 ~----~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          420 Y----HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             C------CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             c----cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            0    0135899999999742       223345677788999999875

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.57  E-value=4e-07  Score=85.70  Aligned_cols=109  Identities=18%  Similarity=0.191  Sum_probs=74.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ..+++++++|+|+ |+||+++++.+...|++|++++|++++++.+.+.+     +..   +.+|.++.+++.+.+.    
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~----  228 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQ----  228 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHH----
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHh----
Confidence            3578899999999 99999999999999999999999988776654332     222   4567777776655432    


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                               ..|++|+++|.....                 .+..+.+..++.|+.   +++||++++..+
T Consensus       229 ---------~~DvVi~~~g~~~~~-----------------~~~li~~~~l~~mk~---gg~iV~v~~~~g  270 (369)
T 2eez_A          229 ---------HADLLIGAVLVPGAK-----------------APKLVTRDMLSLMKE---GAVIVDVAVDQG  270 (369)
T ss_dssp             ---------HCSEEEECCC------------------------CCSCHHHHTTSCT---TCEEEECC----
T ss_pred             ---------CCCEEEECCCCCccc-----------------cchhHHHHHHHhhcC---CCEEEEEecCCC
Confidence                     289999999864210                 012234566677753   589999998654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.53  E-value=1.6e-07  Score=87.16  Aligned_cols=104  Identities=14%  Similarity=0.167  Sum_probs=73.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+ +++     +..   ..+|.++.+++.+.+.++.    
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~----  211 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKAS----  211 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHC----
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHh----
Confidence            478999999999999999999999999999999998776655 333     222   3358877455554444332    


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                          .+++|++|+|+|.         +               .++..++.++.   .|++|.+++..+
T Consensus       212 ----~~~~d~vi~~~g~---------~---------------~~~~~~~~l~~---~G~~v~~g~~~~  248 (333)
T 1v3u_A          212 ----PDGYDCYFDNVGG---------E---------------FLNTVLSQMKD---FGKIAICGAISV  248 (333)
T ss_dssp             ----TTCEEEEEESSCH---------H---------------HHHHHHTTEEE---EEEEEECCCCC-
T ss_pred             ----CCCCeEEEECCCh---------H---------------HHHHHHHHHhc---CCEEEEEecccc
Confidence                2579999999982         0               02334444443   489999987654

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.52  E-value=2.6e-07  Score=85.47  Aligned_cols=104  Identities=12%  Similarity=0.097  Sum_probs=72.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+.+ +     +..   ..+|.++.+..+++.+..     
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~---~~~~~~~~~~~~~~~~~~-----  205 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW---QVINYREEDLVERLKEIT-----  205 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHT-----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCccHHHHHHHHh-----
Confidence            37899999999999999999999999999999999877665543 2     222   235777655444333321     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                         ...++|++|+|+|.  .       .               .+..++.++.   .|++|.+++..+
T Consensus       206 ---~~~~~D~vi~~~g~--~-------~---------------~~~~~~~l~~---~G~iv~~g~~~~  243 (327)
T 1qor_A          206 ---GGKKVRVVYDSVGR--D-------T---------------WERSLDCLQR---RGLMVSFGNSSG  243 (327)
T ss_dssp             ---TTCCEEEEEECSCG--G-------G---------------HHHHHHTEEE---EEEEEECCCTTC
T ss_pred             ---CCCCceEEEECCch--H-------H---------------HHHHHHHhcC---CCEEEEEecCCC
Confidence               22479999999982  1       0               2334445543   489999998654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.51  E-value=6.1e-08  Score=88.13  Aligned_cols=79  Identities=18%  Similarity=0.344  Sum_probs=59.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++|+++|||++ |+|+++|+.|++.| +|++++|+.++++++.+++....... . .+.+|+++.          .+  
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~-~-~~~~d~~~~----------~~--  189 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK-F-GEEVKFSGL----------DV--  189 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC-H-HHHEEEECT----------TC--
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc-c-ceeEEEeeH----------HH--
Confidence            568999999997 99999999999999 99999999988888887775432101 0 123444442          11  


Q ss_pred             hccCCCCCccEEEeccccc
Q 017580          141 LDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~  159 (369)
                          ..+++|++|||+|+.
T Consensus       190 ----~~~~~DilVn~ag~~  204 (287)
T 1nvt_A          190 ----DLDGVDIIINATPIG  204 (287)
T ss_dssp             ----CCTTCCEEEECSCTT
T ss_pred             ----hhCCCCEEEECCCCC
Confidence                457899999999975

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.42  E-value=3.8e-07  Score=88.04  Aligned_cols=78  Identities=12%  Similarity=0.101  Sum_probs=60.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++|+||| +||+|+++++.|++.|++|++++|+.++++++.+++      ..+..+.+|+++.+++.++++       
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~------~~~~~~~~Dv~d~~~l~~~l~-------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALDAEVA-------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC------TTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc------CCceEEEeecCCHHHHHHHHc-------
Confidence            468899998 799999999999999999999999987655443221      136788999999887765442       


Q ss_pred             ccCCCCCccEEEeccccc
Q 017580          142 DSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~  159 (369)
                            .+|++|||++..
T Consensus        68 ------~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 ------KHDLVISLIPYT   79 (450)
T ss_dssp             ------TSSEEEECCC--
T ss_pred             ------CCcEEEECCccc
Confidence                  499999999863

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.37  E-value=2e-06  Score=78.74  Aligned_cols=83  Identities=19%  Similarity=0.276  Sum_probs=63.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC---cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS---SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      +++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++.+++.... +  +.+...++.+.+++.+.   
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~--~~~~~~~~~~~~~l~~~---  223 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-D--CKAQLFDIEDHEQLRKE---  223 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-S--CEEEEEETTCHHHHHHH---
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-C--CceEEeccchHHHHHhh---
Confidence            467999999998 7999999999999999 89999999   788888888887654 2  23344566665544332   


Q ss_pred             HHHHHhccCCCCCccEEEeccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                      +.          ..|++||+..+.
T Consensus       224 l~----------~aDiIINaTp~G  237 (315)
T 3tnl_A          224 IA----------ESVIFTNATGVG  237 (315)
T ss_dssp             HH----------TCSEEEECSSTT
T ss_pred             hc----------CCCEEEECccCC
Confidence            22          389999988653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.37  E-value=1e-06  Score=81.66  Aligned_cols=103  Identities=9%  Similarity=0.057  Sum_probs=71.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+.+ +     +..   ..+|.++.+..+++.+..     
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~-----g~~---~~~d~~~~~~~~~i~~~~-----  210 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L-----GCH---HTINYSTQDFAEVVREIT-----  210 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHH-----
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCHHHHHHHHHHh-----
Confidence            37899999999999999999999999999999999877665532 2     222   235777655443333221     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                         ...++|++|+|+|..                        ..+..++.++.   .|++|.+++..
T Consensus       211 ---~~~~~d~vi~~~g~~------------------------~~~~~~~~l~~---~G~iv~~g~~~  247 (333)
T 1wly_A          211 ---GGKGVDVVYDSIGKD------------------------TLQKSLDCLRP---RGMCAAYGHAS  247 (333)
T ss_dssp             ---TTCCEEEEEECSCTT------------------------THHHHHHTEEE---EEEEEECCCTT
T ss_pred             ---CCCCCeEEEECCcHH------------------------HHHHHHHhhcc---CCEEEEEecCC
Confidence               224799999999841                        12334444443   48999998754

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.30  E-value=1.5e-06  Score=81.20  Aligned_cols=80  Identities=14%  Similarity=0.140  Sum_probs=58.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+||||+||||.++++.+...|++|++++|++++++.+ +++     +..   ..+|.++.+..+++    .+.. 
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~----~~~~-  227 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEAT----LKFT-  227 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHH----HHHT-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHH----HHHh-
Confidence            478999999999999999999999999999999998877665 333     222   23576665433332    2221 


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ...++|++|+|+|.
T Consensus       228 ---~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          228 ---KGAGVNLILDCIGG  241 (354)
T ss_dssp             ---TTSCEEEEEESSCG
T ss_pred             ---cCCCceEEEECCCc
Confidence               22479999999984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.30  E-value=8.5e-07  Score=82.58  Aligned_cols=104  Identities=13%  Similarity=0.080  Sum_probs=72.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|+||+||||..+++.+...|++|++++|++++++.+.+++     +..   ..+|.++.+++.+.+.++     
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~~~~~~~~-----  221 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFD---DAFNYKEESDLTAALKRC-----  221 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCS---EEEETTSCSCSHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCc---eEEecCCHHHHHHHHHHH-----
Confidence            4789999999999999999999999999999999987766554332     222   234776654444444432     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                         ..+++|++|+|+|..                        ..+..++.++.   .|++|.++...
T Consensus       222 ---~~~~~d~vi~~~g~~------------------------~~~~~~~~l~~---~G~~v~~G~~~  258 (345)
T 2j3h_A          222 ---FPNGIDIYFENVGGK------------------------MLDAVLVNMNM---HGRIAVCGMIS  258 (345)
T ss_dssp             ---CTTCEEEEEESSCHH------------------------HHHHHHTTEEE---EEEEEECCCGG
T ss_pred             ---hCCCCcEEEECCCHH------------------------HHHHHHHHHhc---CCEEEEEcccc
Confidence               225799999999830                        12334445543   48999987654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.27  E-value=2.9e-06  Score=78.95  Aligned_cols=104  Identities=15%  Similarity=0.108  Sum_probs=71.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|+||+||||..+++.+...|++|++++|++++++.+. ++     +..   ..+|.++.+ +.   +.+.+.. 
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~---~~~d~~~~~-~~---~~~~~~~-  231 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GAD---ETVNYTHPD-WP---KEVRRLT-  231 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTSTT-HH---HHHHHHT-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCC---EEEcCCccc-HH---HHHHHHh-
Confidence            3789999999999999999999999999999999988776653 22     222   125777653 22   2232211 


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                         ...++|++|+|+| . .                      ..+..++.++.   .|++|.+++..+
T Consensus       232 ---~~~~~d~vi~~~g-~-~----------------------~~~~~~~~l~~---~G~~v~~g~~~~  269 (343)
T 2eih_A          232 ---GGKGADKVVDHTG-A-L----------------------YFEGVIKATAN---GGRIAIAGASSG  269 (343)
T ss_dssp             ---TTTCEEEEEESSC-S-S----------------------SHHHHHHHEEE---EEEEEESSCCCS
T ss_pred             ---CCCCceEEEECCC-H-H----------------------HHHHHHHhhcc---CCEEEEEecCCC
Confidence               1247999999998 2 1                      02334445543   489999987653

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.26  E-value=2.2e-06  Score=80.27  Aligned_cols=102  Identities=13%  Similarity=0.162  Sum_probs=70.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ++++||||+||||.++++.+...|+ +|+++++++++.+.+.+++     +..   ..+|.++.+ +.+.+.+.      
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~-~~~~~~~~------  226 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKDN-VAEQLRES------  226 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTSC-HHHHHHHH------
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCchH-HHHHHHHh------
Confidence            8999999999999999999999999 9999999987766554332     222   235776643 22222222      


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                        ..+++|++|+|+|.         +               ..+..++.++.   .|++|.++...+
T Consensus       227 --~~~~~d~vi~~~G~---------~---------------~~~~~~~~l~~---~G~iv~~G~~~~  264 (357)
T 2zb4_A          227 --CPAGVDVYFDNVGG---------N---------------ISDTVISQMNE---NSHIILCGQISQ  264 (357)
T ss_dssp             --CTTCEEEEEESCCH---------H---------------HHHHHHHTEEE---EEEEEECCCGGG
T ss_pred             --cCCCCCEEEECCCH---------H---------------HHHHHHHHhcc---CcEEEEECCccc
Confidence              12379999999982         1               12334455543   489999987543

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.26  E-value=1.7e-06  Score=77.75  Aligned_cols=77  Identities=13%  Similarity=0.129  Sum_probs=58.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++...  . .+.  ..|+   +++       .  
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~~--~~~~---~~~-------~--  177 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SIQ--ALSM---DEL-------E--  177 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SEE--ECCS---GGG-------T--
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Cee--EecH---HHh-------c--
Confidence            356899999999 79999999999999999999999998888887776432  1 221  2333   221       0  


Q ss_pred             HhccCCCCCccEEEecccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA  160 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~  160 (369)
                           . ++.|++|||+|...
T Consensus       178 -----~-~~~DivVn~t~~~~  192 (271)
T 1nyt_A          178 -----G-HEFDLIINATSSGI  192 (271)
T ss_dssp             -----T-CCCSEEEECCSCGG
T ss_pred             -----c-CCCCEEEECCCCCC
Confidence                 2 56999999999753

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.25  E-value=2.2e-06  Score=79.43  Aligned_cols=104  Identities=15%  Similarity=0.210  Sum_probs=72.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+||||.++++.+...|++|++++|++++.+.+.+++     +..   ..+|.++.+..+    .+.+.  
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~----~~~~~--  214 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNEDLAA----GLKRE--  214 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTSCHHH----HHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCHHHHH----HHHHh--
Confidence            4889999999999999999999999999999999988776653333     222   234666644322    22221  


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                         ..+++|++|+|+|..                        ..+..++.++.   .|++|.++...+
T Consensus       215 ---~~~~~d~vi~~~g~~------------------------~~~~~~~~l~~---~G~iv~~G~~~~  252 (336)
T 4b7c_A          215 ---CPKGIDVFFDNVGGE------------------------ILDTVLTRIAF---KARIVLCGAISQ  252 (336)
T ss_dssp             ---CTTCEEEEEESSCHH------------------------HHHHHHTTEEE---EEEEEECCCGGG
T ss_pred             ---cCCCceEEEECCCcc------------------------hHHHHHHHHhh---CCEEEEEeeccc
Confidence               235799999999831                        12334444543   489999987653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.24  E-value=2.4e-06  Score=79.85  Aligned_cols=79  Identities=15%  Similarity=0.197  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+ +++     +..   ..+|.++.+..++    +.+.. 
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~d~~~~~~~~~----~~~~~-  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-----GAH---EVFNHREVNYIDK----IKKYV-  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSTTHHHH----HHHHH-
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-----CCC---EEEeCCCchHHHH----HHHHc-
Confidence            378999999999999999999999999999999998776633 222     222   2357766543333    32222 


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ...++|++|+|+|
T Consensus       236 ---~~~~~D~vi~~~G  248 (351)
T 1yb5_A          236 ---GEKGIDIIIEMLA  248 (351)
T ss_dssp             ---CTTCEEEEEESCH
T ss_pred             ---CCCCcEEEEECCC
Confidence               2347999999998

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.22  E-value=2e-06  Score=83.15  Aligned_cols=79  Identities=10%  Similarity=0.056  Sum_probs=61.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++++|+|+|| ||+|+++++.|++. |++|++++|+.++++++.+.       ..+..+.+|+++.+++.++++    
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-------~~~~~~~~D~~d~~~l~~~l~----   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-------SGSKAISLDVTDDSALDKVLA----   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-------GTCEEEECCTTCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-------cCCcEEEEecCCHHHHHHHHc----
Confidence            466889999998 99999999999998 68999999998877655432       135667899999887665443    


Q ss_pred             HHhccCCCCCccEEEeccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~  159 (369)
                               .+|+|||+++..
T Consensus        88 ---------~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ---------DNDVVISLIPYT   99 (467)
T ss_dssp             ---------TSSEEEECSCGG
T ss_pred             ---------CCCEEEECCchh
Confidence                     389999999864

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.22  E-value=5.5e-06  Score=74.80  Aligned_cols=81  Identities=19%  Similarity=0.227  Sum_probs=61.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++...++...+.  ..++.+   +.+.   +.+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~~---l~~~---l~~  194 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARG---IEDV---IAA  194 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECSTT---HHHH---HHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHHH---HHHH---Hhc
Confidence            467899999998 7999999999999999 79999999999999998887665444443  344433   2222   222


Q ss_pred             HHhccCCCCCccEEEeccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~  159 (369)
                                .|++||+..+.
T Consensus       195 ----------~DiVInaTp~G  205 (283)
T 3jyo_A          195 ----------ADGVVNATPMG  205 (283)
T ss_dssp             ----------SSEEEECSSTT
T ss_pred             ----------CCEEEECCCCC
Confidence                      79999988653

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.19  E-value=4.3e-06  Score=67.12  Aligned_cols=75  Identities=16%  Similarity=0.168  Sum_probs=58.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++++|+|+ |.+|.++++.|.++|++|+++++++++.+.+.+.        .+.++..|.++++.++++         
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~---------   66 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSL---------   66 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHS---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhC---------
Confidence            3567999998 7799999999999999999999998776655421        356788999998765542         


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ...+.|++|.+.+
T Consensus        67 ---~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 ---DLEGVSAVLITGS   79 (141)
T ss_dssp             ---CCTTCSEEEECCS
T ss_pred             ---CcccCCEEEEecC
Confidence               1246899998776

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.17  E-value=1.4e-06  Score=69.94  Aligned_cols=77  Identities=19%  Similarity=0.217  Sum_probs=56.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +++++++|+|+ |++|..+++.|.+.|++|++++|++++.+.+.    +    .....+..|.++.+.+.++        
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~----~~~~~~~~d~~~~~~l~~~--------   66 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S----YATHAVIANATEENELLSL--------   66 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----T----TCSEEEECCTTCHHHHHTT--------
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----hCCEEEEeCCCCHHHHHhc--------
Confidence            45678999998 99999999999999999999999876543321    1    1235677899886554322        


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ...+.|++|++++.
T Consensus        67 ----~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 ----GIRNFEYVIVAIGA   80 (144)
T ss_dssp             ----TGGGCSEEEECCCS
T ss_pred             ----CCCCCCEEEECCCC
Confidence                12458999999874

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.17  E-value=5.1e-06  Score=76.67  Aligned_cols=104  Identities=12%  Similarity=0.048  Sum_probs=71.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|+||+||||..++..+...|++|+++++++++++.+. ++     +..   ..+|.++.+..+    .+.+.. 
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~~~~----~~~~~~-  205 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAW---ETIDYSHEDVAK----RVLELT-  205 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHH----HHHHHT-
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCccHHH----HHHHHh-
Confidence            4789999999999999999999999999999999988776554 22     222   224555544332    233221 


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                         ...++|++|+|+|..                        ..+..++.++.   .|++|.++...+
T Consensus       206 ---~~~g~Dvvid~~g~~------------------------~~~~~~~~l~~---~G~iv~~g~~~~  243 (325)
T 3jyn_A          206 ---DGKKCPVVYDGVGQD------------------------TWLTSLDSVAP---RGLVVSFGNASG  243 (325)
T ss_dssp             ---TTCCEEEEEESSCGG------------------------GHHHHHTTEEE---EEEEEECCCTTC
T ss_pred             ---CCCCceEEEECCChH------------------------HHHHHHHHhcC---CCEEEEEecCCC
Confidence               234799999999841                        11223444443   489999987654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.12  E-value=6.9e-06  Score=76.06  Aligned_cols=104  Identities=15%  Similarity=0.199  Sum_probs=70.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|+||+||||..++..+...|++|+++++++++++.+. ++     +..   ..+|.++.+..+    .+.+.. 
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~---~~~~~~~~~~~~----~~~~~~-  213 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EY-----GAE---YLINASKEDILR----QVLKFT-  213 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCS---EEEETTTSCHHH----HHHHHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCc---EEEeCCCchHHH----HHHHHh-
Confidence            4789999999999999999999999999999999988766432 22     222   224555543322    233221 


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                         ...++|++++|+|..                        ..+..++.++.   .|++|.++...+
T Consensus       214 ---~~~g~D~vid~~g~~------------------------~~~~~~~~l~~---~G~iv~~G~~~~  251 (334)
T 3qwb_A          214 ---NGKGVDASFDSVGKD------------------------TFEISLAALKR---KGVFVSFGNASG  251 (334)
T ss_dssp             ---TTSCEEEEEECCGGG------------------------GHHHHHHHEEE---EEEEEECCCTTC
T ss_pred             ---CCCCceEEEECCChH------------------------HHHHHHHHhcc---CCEEEEEcCCCC
Confidence               235799999999841                        12233444443   489999987554

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.11  E-value=5.7e-06  Score=79.86  Aligned_cols=110  Identities=15%  Similarity=0.158  Sum_probs=73.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEE--EecCC---------ChHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF--QVDLS---------SFQSVL  130 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~--~~Dls---------~~~~i~  130 (369)
                      .|++|+|+||+||||..++..+...|++|+++++++++++.+. ++     +....+-  ..|+.         +.+++.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-AL-----GCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEEEecccccccccccccccccchhhh
Confidence            4899999999999999999999999999999999887766552 22     2222211  12321         124555


Q ss_pred             HHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          131 KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       131 ~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      ++.+++.+..     ..++|++|+++|..         .               .+..++.++.   .|+||.+++..+
T Consensus       294 ~~~~~v~~~~-----g~g~Dvvid~~G~~---------~---------------~~~~~~~l~~---~G~iv~~G~~~~  340 (447)
T 4a0s_A          294 KLAKLVVEKA-----GREPDIVFEHTGRV---------T---------------FGLSVIVARR---GGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHH-----SSCCSEEEECSCHH---------H---------------HHHHHHHSCT---TCEEEESCCTTC
T ss_pred             HHHHHHHHHh-----CCCceEEEECCCch---------H---------------HHHHHHHHhc---CCEEEEEecCCC
Confidence            5666666632     24799999999831         1               1333444432   589999998654

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.10  E-value=1.2e-05  Score=74.25  Aligned_cols=166  Identities=10%  Similarity=0.073  Sum_probs=104.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCC----cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRS----SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~----~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~  132 (369)
                      ..|+||||+|.||..++..|+.+|.       +|++.+++    +++++....++....  ..+.   .|+...++..+.
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~~---~~i~~~~~~~~a   80 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPLL---AGMTAHADPMTA   80 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTTE---EEEEEESSHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--cccc---CcEEEecCcHHH
Confidence            4799999999999999999999985       79999998    665666556665421  1111   233322222221


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                                   ....|++|+.||.... +..+.   .+.+..|+-....+++.+..+-   +..++||++|.......
T Consensus        81 -------------l~~aD~Vi~~ag~~~~-~g~~r---~dl~~~N~~i~~~i~~~i~~~~---~p~a~ii~~SNPv~~~t  140 (329)
T 1b8p_A           81 -------------FKDADVALLVGARPRG-PGMER---KDLLEANAQIFTVQGKAIDAVA---SRNIKVLVVGNPANTNA  140 (329)
T ss_dssp             -------------TTTCSEEEECCCCCCC-TTCCH---HHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHH
T ss_pred             -------------hCCCCEEEEeCCCCCC-CCCCH---HHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEccCchHHHH
Confidence                         2358999999997532 22232   3467889888888877775542   11479999998664321


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeE
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  266 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~  266 (369)
                      .-..-           ...++|....|+.++.--..+...++..+..+ ...|+
T Consensus       141 ~~~~~-----------~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~-~~~v~  182 (329)
T 1b8p_A          141 YIAMK-----------SAPSLPAKNFTAMLRLDHNRALSQIAAKTGKP-VSSIE  182 (329)
T ss_dssp             HHHHH-----------TCTTSCGGGEEECCHHHHHHHHHHHHHHHTCC-GGGEE
T ss_pred             HHHHH-----------HcCCCCHHHEEEeecHHHHHHHHHHHHHhCcC-HHHce
Confidence            10000           00134455568888877777778888887642 34454

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.09  E-value=1.1e-05  Score=75.10  Aligned_cols=80  Identities=15%  Similarity=0.210  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++++||||+||||..+++.+... |++|+++++++++++.+. ++     +..   ..+|.++.+..++    +.+..
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~----~~~~~  236 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GAD---YVINASMQDPLAE----IRRIT  236 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHH----HHHHT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCC---EEecCCCccHHHH----HHHHh
Confidence            3789999999999999999999999 999999999987766553 33     222   2246666443322    22211


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+++|++|+|+|.
T Consensus       237 ----~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          237 ----ESKGVDAVIDLNNS  250 (347)
T ss_dssp             ----TTSCEEEEEESCCC
T ss_pred             ----cCCCceEEEECCCC
Confidence                11579999999985

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.08  E-value=1.1e-05  Score=75.61  Aligned_cols=100  Identities=15%  Similarity=0.186  Sum_probs=68.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc---chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +++|++|+|+|| ||||..++..+...|++|+++++++   ++.+.+ +++     +.  ..+  | .+ +-.++ +.+ 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~-----ga--~~v--~-~~-~~~~~-~~~-  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET-----KT--NYY--N-SS-NGYDK-LKD-  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH-----TC--EEE--E-CT-TCSHH-HHH-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh-----CC--cee--c-hH-HHHHH-HHH-
Confidence            466999999999 9999999999999999999999998   665433 233     22  222  5 44 21222 222 


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHH-HHHhHhhhcCCCCCeEEEEcCCc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLT-KLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~-~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                      .       . +++|++|+++|...                       .+ +..++.++.   .|+||+++...
T Consensus       243 ~-------~-~~~d~vid~~g~~~-----------------------~~~~~~~~~l~~---~G~iv~~g~~~  281 (366)
T 2cdc_A          243 S-------V-GKFDVIIDATGADV-----------------------NILGNVIPLLGR---NGVLGLFGFST  281 (366)
T ss_dssp             H-------H-CCEEEEEECCCCCT-----------------------HHHHHHGGGEEE---EEEEEECSCCC
T ss_pred             h-------C-CCCCEEEECCCChH-----------------------HHHHHHHHHHhc---CCEEEEEecCC
Confidence            1       2 57999999998521                       12 455666644   48999998743

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.04  E-value=3.2e-05  Score=70.64  Aligned_cols=83  Identities=17%  Similarity=0.247  Sum_probs=61.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC---cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS---SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++++++.+++.... +..  +...++.+.+...   +.
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~~--v~~~~~~~l~~~~---~~  217 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCV--VTVTDLADQHAFT---EA  217 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SCE--EEEEETTCHHHHH---HH
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-Ccc--eEEechHhhhhhH---hh
Confidence            467899999998 8999999999999998 89999999   777888888776553 222  3344555543222   22


Q ss_pred             HHHHHhccCCCCCccEEEeccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                      +.+          .|++||+..+.
T Consensus       218 l~~----------~DiIINaTp~G  231 (312)
T 3t4e_A          218 LAS----------ADILTNGTKVG  231 (312)
T ss_dssp             HHH----------CSEEEECSSTT
T ss_pred             ccC----------ceEEEECCcCC
Confidence            222          79999988764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.02  E-value=4e-05  Score=71.32  Aligned_cols=79  Identities=13%  Similarity=0.106  Sum_probs=56.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +++++|+||+||||...+..+...|++|+++++++++.+.+. ++     +..   ..+|..+.+- .+.+.++..    
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~~-~~~v~~~~~----  230 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAA---HVLNEKAPDF-EATLREVMK----  230 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCS---EEEETTSTTH-HHHHHHHHH----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEECCcHHH-HHHHHHHhc----
Confidence            489999999999999999999999999999999998876654 23     222   1245555332 222222221    


Q ss_pred             cCCCCCccEEEecccc
Q 017580          143 SDMHSSIQLLINNAGI  158 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~  158 (369)
                         ..++|++++++|.
T Consensus       231 ---~~g~D~vid~~g~  243 (349)
T 3pi7_A          231 ---AEQPRIFLDAVTG  243 (349)
T ss_dssp             ---HHCCCEEEESSCH
T ss_pred             ---CCCCcEEEECCCC
Confidence               1369999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.99  E-value=1.9e-05  Score=73.68  Aligned_cols=104  Identities=13%  Similarity=0.111  Sum_probs=71.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+||||.+++..+...|++|+++++++++++.+.+ +     +..   ..+|.++.+..+.+    .+.  
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~---~~~~~~~~~~~~~~----~~~--  231 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L-----GAK---RGINYRSEDFAAVI----KAE--  231 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHH----HHH--
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCC---EEEeCCchHHHHHH----HHH--
Confidence            47899999999999999999999999999999999888765543 2     222   12455554433222    221  


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                         ..+++|++|+|+|..         .               .+..++.++.   .|++|.+++..+.
T Consensus       232 ---~~~g~Dvvid~~g~~---------~---------------~~~~~~~l~~---~G~iv~~g~~~~~  270 (353)
T 4dup_A          232 ---TGQGVDIILDMIGAA---------Y---------------FERNIASLAK---DGCLSIIAFLGGA  270 (353)
T ss_dssp             ---HSSCEEEEEESCCGG---------G---------------HHHHHHTEEE---EEEEEECCCTTCS
T ss_pred             ---hCCCceEEEECCCHH---------H---------------HHHHHHHhcc---CCEEEEEEecCCC
Confidence               125799999999841         0               1233444443   4899999876543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.96  E-value=1.9e-05  Score=73.27  Aligned_cols=80  Identities=18%  Similarity=0.198  Sum_probs=57.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+||||..++..+...|++|+++++++++.+.+.+ +     +...   .+|.++.+..    +.+.+.. 
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~---~~~~~~~~~~----~~~~~~~-  209 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAY---VIDTSTAPLY----ETVMELT-  209 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE---EEETTTSCHH----HHHHHHT-
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcE---EEeCCcccHH----HHHHHHh-
Confidence            47899999999999999999999999999999999988766543 2     2221   2455554322    2233221 


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ...++|++|+|+|.
T Consensus       210 ---~~~g~Dvvid~~g~  223 (340)
T 3gms_A          210 ---NGIGADAAIDSIGG  223 (340)
T ss_dssp             ---TTSCEEEEEESSCH
T ss_pred             ---CCCCCcEEEECCCC
Confidence               23479999999985

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.92  E-value=1.4e-05  Score=71.87  Aligned_cols=76  Identities=18%  Similarity=0.235  Sum_probs=57.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++++++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++....   .+..  +|+   +++.         
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~---~~~~--~~~---~~~~---------  177 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQA--VSM---DSIP---------  177 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEEE--EEG---GGCC---------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC---CeEE--eeH---HHhc---------
Confidence            356899999998 799999999999999999999999999888887774321   2222  332   1110         


Q ss_pred             HhccCCCCCccEEEeccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~  159 (369)
                           . +..|++||+++..
T Consensus       178 -----~-~~~DivIn~t~~~  191 (272)
T 1p77_A          178 -----L-QTYDLVINATSAG  191 (272)
T ss_dssp             -----C-SCCSEEEECCCC-
T ss_pred             -----c-CCCCEEEECCCCC
Confidence                 1 3699999999875

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.91  E-value=8.2e-05  Score=70.01  Aligned_cols=107  Identities=19%  Similarity=0.215  Sum_probs=71.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++.|++++|+|+ |+||.++++.+...|++|++++|++++++.+.+.+     +..+   .+|.++.+++.+.+   . 
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~~~l~~~l---~-  230 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSAYELEGAV---K-  230 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCHHHHHHHH---H-
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCHHHHHHHH---c-
Confidence            3678999999999 99999999999999999999999988776655433     2222   23334444443332   2 


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                               ..|++|++++....  +. +              ..+.+..++.|+.   ++.||++++.
T Consensus       231 ---------~aDvVi~~~~~p~~--~t-~--------------~li~~~~l~~mk~---g~~iV~va~~  270 (377)
T 2vhw_A          231 ---------RADLVIGAVLVPGA--KA-P--------------KLVSNSLVAHMKP---GAVLVDIAID  270 (377)
T ss_dssp             ---------HCSEEEECCCCTTS--CC-C--------------CCBCHHHHTTSCT---TCEEEEGGGG
T ss_pred             ---------CCCEEEECCCcCCC--CC-c--------------ceecHHHHhcCCC---CcEEEEEecC
Confidence                     28999999986421  10 0              1112345555643   4799999964

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.90  E-value=5.1e-05  Score=70.42  Aligned_cols=79  Identities=16%  Similarity=0.215  Sum_probs=55.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+||||..++..+...|++|+++++++++.+.+.+ +     +.. .+  .|..  +++.   +.+.+.. 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----ga~-~v--~~~~--~~~~---~~v~~~~-  223 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V-----GAD-IV--LPLE--EGWA---KAVREAT-  223 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCS-EE--EESS--TTHH---HHHHHHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCc-EE--ecCc--hhHH---HHHHHHh-
Confidence            48899999999999999999999999999999999888765443 2     222 12  2333  2232   3333321 


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ...++|++|+|+|.
T Consensus       224 ---~~~g~Dvvid~~g~  237 (342)
T 4eye_A          224 ---GGAGVDMVVDPIGG  237 (342)
T ss_dssp             ---TTSCEEEEEESCC-
T ss_pred             ---CCCCceEEEECCch
Confidence               22379999999984

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.86  E-value=5.5e-05  Score=70.10  Aligned_cols=102  Identities=15%  Similarity=0.092  Sum_probs=69.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+|| ||||..++..+...|++|++++|++++++.+. ++     +..   ..+|.++.+ +.   +.+.+.  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~---~~~d~~~~~-~~---~~~~~~--  227 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL-----GAD---LVVNPLKED-AA---KFMKEK--  227 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT-----TCS---EEECTTTSC-HH---HHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC-----CCC---EEecCCCcc-HH---HHHHHH--
Confidence            3789999999 88999999999999999999999988776543 22     222   235776543 22   223221  


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                         . +++|++|+++|..        +               ..+..++.++.   .|++|.+++..+
T Consensus       228 ---~-~~~d~vid~~g~~--------~---------------~~~~~~~~l~~---~G~~v~~g~~~~  265 (339)
T 1rjw_A          228 ---V-GGVHAAVVTAVSK--------P---------------AFQSAYNSIRR---GGACVLVGLPPE  265 (339)
T ss_dssp             ---H-SSEEEEEESSCCH--------H---------------HHHHHHHHEEE---EEEEEECCCCSS
T ss_pred             ---h-CCCCEEEECCCCH--------H---------------HHHHHHHHhhc---CCEEEEecccCC
Confidence               1 4699999999841        1               12344455543   489999987543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.84  E-value=0.00012  Score=59.55  Aligned_cols=77  Identities=13%  Similarity=0.129  Sum_probs=57.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++.++|.|+ |.+|..+++.|.+.|++|+++++++ ++.+.+.+..     ...+.++..|.++++.+++.         
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a---------   67 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA---------   67 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH---------
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc---------
Confidence            467888886 9999999999999999999999984 4444444332     23467889999998765432         


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ...+.|.+|.+.+
T Consensus        68 ---~i~~ad~vi~~~~   80 (153)
T 1id1_A           68 ---GIDRCRAILALSD   80 (153)
T ss_dssp             ---TTTTCSEEEECSS
T ss_pred             ---ChhhCCEEEEecC
Confidence               1245788887765

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.80  E-value=7.9e-05  Score=69.85  Aligned_cols=99  Identities=17%  Similarity=0.172  Sum_probs=68.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+|+ |+||..++..+...|++|+++++++++.+.+.+++     +..   ..+|..+.+.       +.+   
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~---~v~~~~~~~~-------~~~---  247 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GAD---SFLVSRDQEQ-------MQA---  247 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCS---EEEETTCHHH-------HHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCc---eEEeccCHHH-------HHH---
Confidence            4789999996 99999999999999999999999988776654333     222   1246665432       222   


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                         ..+++|++|+++|...                       .++..++.++.   .|++|++++..
T Consensus       248 ---~~~~~D~vid~~g~~~-----------------------~~~~~~~~l~~---~G~iv~~g~~~  285 (366)
T 1yqd_A          248 ---AAGTLDGIIDTVSAVH-----------------------PLLPLFGLLKS---HGKLILVGAPE  285 (366)
T ss_dssp             ---TTTCEEEEEECCSSCC-----------------------CSHHHHHHEEE---EEEEEECCCCS
T ss_pred             ---hhCCCCEEEECCCcHH-----------------------HHHHHHHHHhc---CCEEEEEccCC
Confidence               2247999999998531                       01233444543   48999999854

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.80  E-value=6.7e-05  Score=66.42  Aligned_cols=82  Identities=17%  Similarity=0.293  Sum_probs=65.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++++|+|.|+ ||+|.++++.|+..|. +|++++++.                   .+.+.+.+.+.+.++..++..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            45789999997 6999999999999997 999999998                   88889989998888788888887


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      .++++ +.+.+++             ...|++|++.+
T Consensus       108 ~~~~~-~~~~~~~-------------~~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLDD-AELAALI-------------AEHDLVLDCTD  130 (249)
T ss_dssp             SCCCH-HHHHHHH-------------HTSSEEEECCS
T ss_pred             ccCCH-hHHHHHH-------------hCCCEEEEeCC
Confidence            77763 3333222             13899998764

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.80  E-value=0.0002  Score=66.94  Aligned_cols=78  Identities=22%  Similarity=0.194  Sum_probs=56.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+++++|+|+|+ ||+|+++++.+...|++|++++|++++++.+.+....     .+..   +..+.+++.   +.+.  
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~---~~~~~~~~~---~~~~--  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVEL---LYSNSAEIE---TAVA--  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEE---EECCHHHHH---HHHH--
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEe---eeCCHHHHH---HHHc--
Confidence            467799999999 9999999999999999999999999888776554321     2212   222333332   2222  


Q ss_pred             HhccCCCCCccEEEeccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~  159 (369)
                              ..|++|+++|..
T Consensus       230 --------~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 --------EADLLIGAVLVP  241 (361)
T ss_dssp             --------TCSEEEECCCCT
T ss_pred             --------CCCEEEECCCcC
Confidence                    389999999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.78  E-value=9.7e-05  Score=71.37  Aligned_cols=111  Identities=14%  Similarity=0.091  Sum_probs=76.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEE--Eec--------CCChHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF--QVD--------LSSFQSVLK  131 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~--~~D--------ls~~~~i~~  131 (369)
                      .|++|+|+||+|+||...+..+...|++|+++++++++++.+. ++     +....+-  ..|        .++.+++++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AM-----GAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hh-----CCcEEEecCcCcccccccccccchHHHHH
Confidence            4889999999999999999999999999999999887776553 33     2221111  112        245566777


Q ss_pred             HHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          132 FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       132 ~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      +.+.+++..    ...++|++|.++|..                        .....+..++.   .|++|.+++..+
T Consensus       302 ~~~~i~~~t----~g~g~Dvvid~~G~~------------------------~~~~~~~~l~~---~G~iv~~G~~~~  348 (456)
T 3krt_A          302 FGKRIRELT----GGEDIDIVFEHPGRE------------------------TFGASVFVTRK---GGTITTCASTSG  348 (456)
T ss_dssp             HHHHHHHHH----TSCCEEEEEECSCHH------------------------HHHHHHHHEEE---EEEEEESCCTTC
T ss_pred             HHHHHHHHh----CCCCCcEEEEcCCch------------------------hHHHHHHHhhC---CcEEEEEecCCC
Confidence            777777643    225799999999831                        11233444443   489999987654

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.75  E-value=0.00018  Score=64.85  Aligned_cols=95  Identities=16%  Similarity=0.310  Sum_probs=75.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                  .+.+.+++.+++.+|..+++.+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            466789999988 6899999999999997 999999876                  78888999999999999999999


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      .++++.+.+.++++.+...  ........|++|.+..
T Consensus       112 ~~l~~~~~~~~~~~~~~~~--~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNG--GLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHB--SSSTTBCCSEEEECCS
T ss_pred             ccCCcHHHHHHHhhhhccc--ccccCCCCCEEEECCc
Confidence            9999877777777655431  0001146899987653

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.75  E-value=8.7e-05  Score=69.44  Aligned_cols=103  Identities=16%  Similarity=0.164  Sum_probs=69.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+||||..+++.+...|++|+++++++++.+.+.+ +     +...   .+|..+.+ +.+   .+.+.  
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----Ga~~---~~~~~~~~-~~~---~~~~~--  227 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L-----GCDR---PINYKTEP-VGT---VLKQE--  227 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T-----TCSE---EEETTTSC-HHH---HHHHH--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c-----CCcE---EEecCChh-HHH---HHHHh--
Confidence            37899999999999999999999999999999999877655432 2     2221   23554432 222   22221  


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                         ..+++|++|+|+|.         +               ..+..++.++.   .|++|.+++..+
T Consensus       228 ---~~~g~D~vid~~g~---------~---------------~~~~~~~~l~~---~G~iv~~g~~~~  265 (362)
T 2c0c_A          228 ---YPEGVDVVYESVGG---------A---------------MFDLAVDALAT---KGRLIVIGFISG  265 (362)
T ss_dssp             ---CTTCEEEEEECSCT---------H---------------HHHHHHHHEEE---EEEEEECCCGGG
T ss_pred             ---cCCCCCEEEECCCH---------H---------------HHHHHHHHHhc---CCEEEEEeCCCC
Confidence               22579999999982         1               12234445543   489999998654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.70  E-value=0.0001  Score=65.95  Aligned_cols=48  Identities=15%  Similarity=0.213  Sum_probs=43.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADIT  108 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~  108 (369)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++.
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            467999999998 6999999999999996 99999999999888887774

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.70  E-value=0.00017  Score=57.08  Aligned_cols=75  Identities=17%  Similarity=0.234  Sum_probs=55.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +..++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+.    .   .+.++..|.++.+.+.+.          
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----~---~~~~~~~d~~~~~~l~~~----------   65 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----I---DALVINGDCTKIKTLEDA----------   65 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----C---SSEEEESCTTSHHHHHHT----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh----c---CcEEEEcCCCCHHHHHHc----------
Confidence            357899987 9999999999999999999999998765544322    1   345677898887654321          


Q ss_pred             cCCCCCccEEEeccc
Q 017580          143 SDMHSSIQLLINNAG  157 (369)
Q Consensus       143 ~~~~~~id~lv~nAG  157 (369)
                        .....|++|.+.+
T Consensus        66 --~~~~~d~vi~~~~   78 (140)
T 1lss_A           66 --GIEDADMYIAVTG   78 (140)
T ss_dssp             --TTTTCSEEEECCS
T ss_pred             --CcccCCEEEEeeC
Confidence              1246899998875

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.69  E-value=0.00046  Score=63.50  Aligned_cols=118  Identities=17%  Similarity=0.152  Sum_probs=73.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           64 PVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ..++||||+|.+|..++..|+.+|  .+|++++++++  +....++.......++..    +++.++..+.+        
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al--------   74 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL--------   74 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH--------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc--------
Confidence            479999999999999999999999  68999998876  333334433211112222    22222332221        


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                           ...|++|+.||..... ..+.   .+.+.+|+-+...+++.+.+.-   . .+.|+++|...
T Consensus        75 -----~gaDvVi~~ag~~~~~-g~~r---~dl~~~N~~~~~~i~~~i~~~~---p-~~~viv~SNPv  128 (326)
T 1smk_A           75 -----TGMDLIIVPAGVPRKP-GMTR---DDLFKINAGIVKTLCEGIAKCC---P-RAIVNLISNPV  128 (326)
T ss_dssp             -----TTCSEEEECCCCCCCS-SCCC---SHHHHHHHHHHHHHHHHHHHHC---T-TSEEEECCSSH
T ss_pred             -----CCCCEEEEcCCcCCCC-CCCH---HHHHHHHHHHHHHHHHHHHhhC---C-CeEEEEECCch
Confidence                 3489999999975322 1221   2457889888888887776542   1 35566655443

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.69  E-value=4.9e-05  Score=69.09  Aligned_cols=46  Identities=13%  Similarity=0.177  Sum_probs=41.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~  107 (369)
                      +++++++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~  185 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG  185 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            56899999998 7999999999999998 9999999998888777665

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.68  E-value=0.00082  Score=61.45  Aligned_cols=167  Identities=18%  Similarity=0.244  Sum_probs=100.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeC--CcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGR--SSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r--~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++||||+|.+|..++..|+.+|.  +++++++  ++++++....++....  .+..+.+...|  |  ++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHH-------
Confidence            589999999999999999999885  6999998  7665555444443321  11222222211  1  0111       


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                            .....|++|+.||+.... ..+.   ...+.+|+-....+++.+..+-     .+.|+++|........-    
T Consensus        71 ------al~gaD~Vi~~Ag~~~~~-g~~r---~dl~~~N~~i~~~i~~~i~~~~-----~~~vlv~SNPv~~~t~~----  131 (313)
T 1hye_A           71 ------IIDESDVVIITSGVPRKE-GMSR---MDLAKTNAKIVGKYAKKIAEIC-----DTKIFVITNPVDVMTYK----  131 (313)
T ss_dssp             ------GGTTCSEEEECCSCCCCT-TCCH---HHHHHHHHHHHHHHHHHHHHHC-----CCEEEECSSSHHHHHHH----
T ss_pred             ------HhCCCCEEEECCCCCCCC-CCcH---HHHHHHHHHHHHHHHHHHHHhC-----CeEEEEecCcHHHHHHH----
Confidence                  124599999999975321 2222   3468899998888888876652     25777777655432110    


Q ss_pred             CcccccccccccCCCchhhhhhh-hHHHHHHHHHHHHHHhCCCCCCCeEEEEe
Q 017580          219 NETITGKFFLRSKCYPCARIYEY-SKLCLLIFSYELHRNLGLDKSRHVSVIAA  270 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~-SK~a~~~~~~~la~el~~~~~~~i~v~~v  270 (369)
                              ..+..++|....++. +..-...+...+++.+..+ ...|+..++
T Consensus       132 --------~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lgv~-~~~v~~~v~  175 (313)
T 1hye_A          132 --------ALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVH-IDEVRTRII  175 (313)
T ss_dssp             --------HHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHTCC-GGGEECCEE
T ss_pred             --------HHHhhCcChhcEEEeCccHHHHHHHHHHHHHhCcC-HHHeEEEEe
Confidence                    000123444456676 6665667777788877643 344554333

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.67  E-value=0.00017  Score=67.07  Aligned_cols=103  Identities=13%  Similarity=0.159  Sum_probs=68.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|| |+||..+++.+...|+ +|+++++++++.+.+. ++     +..   ..+|..+.+ +.   +++.+..
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~-~~---~~v~~~~  232 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GAD---YVINPFEED-VV---KEVMDIT  232 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCS---EEECTTTSC-HH---HHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC---EEECCCCcC-HH---HHHHHHc
Confidence            4789999999 9999999999999999 9999999987765543 33     222   124555433 22   2333211


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                          ...++|++|+++|..        +               .++..++.++.   .|++|.+++..
T Consensus       233 ----~g~g~D~vid~~g~~--------~---------------~~~~~~~~l~~---~G~iv~~g~~~  270 (348)
T 2d8a_A          233 ----DGNGVDVFLEFSGAP--------K---------------ALEQGLQAVTP---AGRVSLLGLYP  270 (348)
T ss_dssp             ----TTSCEEEEEECSCCH--------H---------------HHHHHHHHEEE---EEEEEECCCCS
T ss_pred             ----CCCCCCEEEECCCCH--------H---------------HHHHHHHHHhc---CCEEEEEccCC
Confidence                123699999999841        1               22444555543   48999998754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.64  E-value=0.00017  Score=66.83  Aligned_cols=76  Identities=17%  Similarity=0.254  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+|+||..++..+...|++|+++ +++++++.+ +++     +...    +| .+ +++.+.+.+..    
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~-~~~~~~~~~~~----  212 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-AS-REPEDYAAEHT----  212 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TT-SCHHHHHHHHH----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cC-CCHHHHHHHHh----
Confidence            47899999999999999999999999999999 777665543 233     3322    45 33 23333333222    


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ...++|++++++|
T Consensus       213 ---~~~g~D~vid~~g  225 (343)
T 3gaz_A          213 ---AGQGFDLVYDTLG  225 (343)
T ss_dssp             ---TTSCEEEEEESSC
T ss_pred             ---cCCCceEEEECCC
Confidence               2357999999998

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.62  E-value=0.0006  Score=63.63  Aligned_cols=83  Identities=12%  Similarity=0.121  Sum_probs=58.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ |++|...+......|++ |+++++++++.+.+.+ +     ...+..+..|-.+.+++.   +++++..
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-----~~~~~~~~~~~~~~~~~~---~~v~~~t  248 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-----CPEVVTHKVERLSAEESA---KKIVESF  248 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-----CTTCEEEECCSCCHHHHH---HHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-----chhcccccccccchHHHH---HHHHHHh
Confidence            3789999998 99999999888889997 9999999887765543 2     223445556655555443   3343322


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ...++|+++.++|.
T Consensus       249 ----~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          249 ----GGIEPAVALECTGV  262 (363)
T ss_dssp             ----SSCCCSEEEECSCC
T ss_pred             ----CCCCCCEEEECCCC
Confidence                23579999999984

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.59  E-value=0.001  Score=60.50  Aligned_cols=162  Identities=16%  Similarity=0.105  Sum_probs=93.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeC--CcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGR--SSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r--~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++||||+|.+|..++..|+.+|.  ++++.++  ++++++....++..... ...+.+.. |  +.+            
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~------------   66 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE------------   66 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG------------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH------------
Confidence            589999999999999999999885  7999999  77666655555544311 12233332 2  222            


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                           .....|++|+.||+.... ..+.   .+.+.+|+-....+++.+..+    ...+.|+++|........      
T Consensus        67 -----a~~~aDvVi~~ag~~~~~-g~~r---~dl~~~N~~i~~~i~~~i~~~----~p~~~viv~SNPv~~~~~------  127 (303)
T 1o6z_A           67 -----DTAGSDVVVITAGIPRQP-GQTR---IDLAGDNAPIMEDIQSSLDEH----NDDYISLTTSNPVDLLNR------  127 (303)
T ss_dssp             -----GGTTCSEEEECCCCCCCT-TCCH---HHHHHHHHHHHHHHHHHHHTT----CSCCEEEECCSSHHHHHH------
T ss_pred             -----HhCCCCEEEEcCCCCCCC-CCCH---HHHHHHHHHHHHHHHHHHHHH----CCCcEEEEeCChHHHHHH------
Confidence                 124599999999975322 2232   345788888887777766443    224566665554432110      


Q ss_pred             cccccccccccCCCchhhhhhh-hHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017580          220 ETITGKFFLRSKCYPCARIYEY-SKLCLLIFSYELHRNLGLDKSRHVSV  267 (369)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~Y~~-SK~a~~~~~~~la~el~~~~~~~i~v  267 (369)
                            ...+..++|.....+. +-.=...+...+++.+..+ +..|++
T Consensus       128 ------~~~~~~~~p~~rviG~gt~Ld~~r~~~~la~~l~v~-~~~v~~  169 (303)
T 1o6z_A          128 ------HLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAP-VQNVEG  169 (303)
T ss_dssp             ------HHHHHSSSCGGGEEECCHHHHHHHHHHHHHHHHTCC-GGGEEC
T ss_pred             ------HHHHHcCCCHHHeeecccchhHHHHHHHHHHHhCcC-HHHeEE
Confidence                  0000123344444555 3333445556677776532 344443

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.58  E-value=0.00036  Score=64.86  Aligned_cols=82  Identities=17%  Similarity=0.178  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ |++|...+..+...|++|+++++++++++.+. ++     +.. .  .+|.++ .+..++    +.+..
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~--~~~~~~~~~~~~~----i~~~~  233 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-----GAD-V--TLVVDPAKEEESS----IIERI  233 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-E--EEECCTTTSCHHH----HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-----CCC-E--EEcCcccccHHHH----HHHHh
Confidence            3789999997 89999999988889999999999987765543 22     222 1  234443 222222    22211


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                      ++. ...++|++|+++|.
T Consensus       234 ~~~-~g~g~D~vid~~g~  250 (352)
T 1e3j_A          234 RSA-IGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHH-SSSCCSEEEECSCC
T ss_pred             ccc-cCCCCCEEEECCCC
Confidence            100 02469999999984

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.51  E-value=0.0002  Score=67.02  Aligned_cols=76  Identities=21%  Similarity=0.314  Sum_probs=55.5

Q ss_pred             CCCCCC--EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           59 TGIKRP--VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        59 ~~~~~k--~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+++|+  .|+|.|| |++|+.+|+.|++ ..+|.+++|+.++++++.         ..+..+.+|++|.+++.++++  
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~---------~~~~~~~~d~~d~~~l~~~~~--   76 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK---------EFATPLKVDASNFDKLVEVMK--   76 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT---------TTSEEEECCTTCHHHHHHHHT--
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh---------ccCCcEEEecCCHHHHHHHHh--
Confidence            345554  5888899 9999999999875 579999999987765542         245678899999887766543  


Q ss_pred             HHHHhccCCCCCccEEEecccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~  158 (369)
                                 ..|++||+++.
T Consensus        77 -----------~~DvVi~~~p~   87 (365)
T 3abi_A           77 -----------EFELVIGALPG   87 (365)
T ss_dssp             -----------TCSEEEECCCG
T ss_pred             -----------CCCEEEEecCC
Confidence                       37999999875

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.49  E-value=0.00053  Score=60.65  Aligned_cols=82  Identities=21%  Similarity=0.325  Sum_probs=63.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.++..++..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            45789999998 6799999999999998 888986643                   67888888888888888888887


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      .+++. +.+.++++   +          .|++|++..
T Consensus       105 ~~~~~-~~~~~~~~---~----------~DvVi~~~d  127 (251)
T 1zud_1          105 QRLTG-EALKDAVA---R----------ADVVLDCTD  127 (251)
T ss_dssp             SCCCH-HHHHHHHH---H----------CSEEEECCS
T ss_pred             ccCCH-HHHHHHHh---c----------CCEEEECCC
Confidence            77754 33333322   2          789997753

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.47  E-value=0.00039  Score=64.53  Aligned_cols=78  Identities=10%  Similarity=0.163  Sum_probs=55.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+|+||...+..+...|++|+++++++++++.+.+ +     +..   ..+|..+  +.   .+.+++.  
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~---~vi~~~~--~~---~~~~~~~--  213 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GAD---IVLNHKE--SL---LNQFKTQ--  213 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCS---EEECTTS--CH---HHHHHHH--
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCc---EEEECCc--cH---HHHHHHh--
Confidence            48899999999999999999999999999999999887665543 3     222   1234432  22   3333331  


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+.+|++++++|.
T Consensus       214 ---~~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          214 ---GIELVDYVFCTFNT  227 (346)
T ss_dssp             ---TCCCEEEEEESSCH
T ss_pred             ---CCCCccEEEECCCc
Confidence               23579999999984

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.43  E-value=0.00088  Score=62.78  Aligned_cols=79  Identities=14%  Similarity=0.229  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~  139 (369)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++++.+. ++     +..   ..+|.++ .+++.+.+.++.  
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~---~vi~~~~~~~~~~~~~~~~~--  259 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GAT---DFVNPNDHSEPISQVLSKMT--  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCC---EEECGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCc---eEEeccccchhHHHHHHHHh--
Confidence            3789999996 8999999998888999 8999999988876543 22     222   1245443 123433333332  


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                            .+++|++|+++|.
T Consensus       260 ------~~g~D~vid~~g~  272 (374)
T 1cdo_A          260 ------NGGVDFSLECVGN  272 (374)
T ss_dssp             ------TSCBSEEEECSCC
T ss_pred             ------CCCCCEEEECCCC
Confidence                  2479999999985

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.37  E-value=0.00039  Score=63.17  Aligned_cols=41  Identities=22%  Similarity=0.265  Sum_probs=37.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      |++++|+||+||+|..++..+...|++|+++++++++.+.+
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            78999999999999999999999999999999998887655

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.36  E-value=0.00064  Score=54.23  Aligned_cols=73  Identities=12%  Similarity=0.078  Sum_probs=55.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      +.++|.|+ |.+|..+++.|.+.|++|+++++++++.+.+.+        ..+.++..|.++++.++++           
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a-----------   67 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLA-----------   67 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHT-----------
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhc-----------
Confidence            45788887 789999999999999999999999887665542        1456788999998765442           


Q ss_pred             CCCCCccEEEeccc
Q 017580          144 DMHSSIQLLINNAG  157 (369)
Q Consensus       144 ~~~~~id~lv~nAG  157 (369)
                       ...+.|++|.+.+
T Consensus        68 -~i~~ad~vi~~~~   80 (140)
T 3fwz_A           68 -HLECAKWLILTIP   80 (140)
T ss_dssp             -TGGGCSEEEECCS
T ss_pred             -CcccCCEEEEECC
Confidence             1134788887665

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.33  E-value=0.0014  Score=61.39  Aligned_cols=79  Identities=14%  Similarity=0.213  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~  139 (369)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++.+.+. ++     +..   ..+|.++ .+++.+.+.++   
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~---~vi~~~~~~~~~~~~v~~~---  256 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GAT---ECINPQDFSKPIQEVLIEM---  256 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCS---EEECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc---eEeccccccccHHHHHHHH---
Confidence            3789999996 8999999988888899 8999999988876554 33     222   1235443 12333333322   


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+++|++|.++|.
T Consensus       257 -----~~~g~D~vid~~g~  270 (373)
T 2fzw_A          257 -----TDGGVDYSFECIGN  270 (373)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----hCCCCCEEEECCCc
Confidence                 22579999999985

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.33  E-value=0.00051  Score=57.42  Aligned_cols=78  Identities=10%  Similarity=0.054  Sum_probs=56.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++.++.++|.|+ |.+|..+++.|.+. |++|+++++++++.+.+.    +.    .+.++..|.++.+.+.++     .
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~----g~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SE----GRNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HT----TCCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HC----CCCEEEcCCCCHHHHHhc-----c
Confidence            455777888885 89999999999999 999999999987765543    21    245677899887643321     0


Q ss_pred             HHhccCCCCCccEEEeccc
Q 017580          139 WLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG  157 (369)
                            .....|++|.+.+
T Consensus       102 ------~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 ------DTGHVKLVLLAMP  114 (183)
T ss_dssp             ------SCCCCCEEEECCS
T ss_pred             ------CCCCCCEEEEeCC
Confidence                  1245899988765

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.32  E-value=0.0015  Score=61.27  Aligned_cols=79  Identities=13%  Similarity=0.244  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~  139 (369)
                      .|++|+|+|+ |++|..++..+...|+ +|+++++++++.+.+. ++     +..   ..+|..+ .+++.+.+.++   
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~---~vi~~~~~~~~~~~~~~~~---  257 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-----GAT---ECVNPQDYKKPIQEVLTEM---  257 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCS---EEECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCc---eEecccccchhHHHHHHHH---
Confidence            3789999995 8999999998888999 8999999988876553 22     222   1245443 12333333322   


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+++|++|.++|.
T Consensus       258 -----~~~g~D~vid~~g~  271 (374)
T 2jhf_A          258 -----SNGGVDFSFEVIGR  271 (374)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----hCCCCcEEEECCCC
Confidence                 22479999999985

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.32  E-value=0.00022  Score=58.00  Aligned_cols=78  Identities=15%  Similarity=0.167  Sum_probs=55.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ...++.++|.|+ |.+|..+++.|.+.|++|++++|++++.+.+.+       ......+..|.++.+.+.+.       
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~-------   80 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKEC-------   80 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTT-------
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHc-------
Confidence            355788999996 999999999999999999999999876543211       11244667788876543221       


Q ss_pred             HhccCCCCCccEEEeccc
Q 017580          140 LLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG  157 (369)
                           .....|++|.+.+
T Consensus        81 -----~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 -----GMEKADMVFAFTN   93 (155)
T ss_dssp             -----TGGGCSEEEECSS
T ss_pred             -----CcccCCEEEEEeC
Confidence                 1235799998876

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.31  E-value=0.00035  Score=62.85  Aligned_cols=50  Identities=12%  Similarity=0.122  Sum_probs=44.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhh
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR  110 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~  110 (369)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++...
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~  173 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY  173 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc
Confidence            467899999998 6999999999999996 9999999999998888887543

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.29  E-value=0.0014  Score=61.48  Aligned_cols=79  Identities=14%  Similarity=0.206  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~  139 (369)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++.+.+. ++     +..   ..+|.++ .+++.+.+.++.  
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~---~vi~~~~~~~~~~~~v~~~~--  262 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GAT---DCLNPRELDKPVQDVITELT--  262 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCS---EEECGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCc---EEEccccccchHHHHHHHHh--
Confidence            3789999996 8999999988888999 8999999988876543 22     222   1235443 123333333322  


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                            .+++|++|.++|.
T Consensus       263 ------~~g~Dvvid~~G~  275 (376)
T 1e3i_A          263 ------AGGVDYSLDCAGT  275 (376)
T ss_dssp             ------TSCBSEEEESSCC
T ss_pred             ------CCCccEEEECCCC
Confidence                  2479999999985

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.29  E-value=0.00041  Score=64.25  Aligned_cols=100  Identities=15%  Similarity=0.095  Sum_probs=65.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|| |++|..++..+...|+ +|+++++++++.+.+.+ +     ..    ..+|..+. ++.+.+.++    
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-----a~----~v~~~~~~-~~~~~~~~~----  227 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-----AD----RLVNPLEE-DLLEVVRRV----  227 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-----CS----EEECTTTS-CHHHHHHHH----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-----HH----hccCcCcc-CHHHHHHHh----
Confidence            4789999999 9999999998888999 99999998776543321 1     11    12455543 232222222    


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                          ...++|++|+++|..        +               ..+..++.++.   .|++|.+++.
T Consensus       228 ----~~~g~D~vid~~g~~--------~---------------~~~~~~~~l~~---~G~iv~~g~~  264 (343)
T 2dq4_A          228 ----TGSGVEVLLEFSGNE--------A---------------AIHQGLMALIP---GGEARILGIP  264 (343)
T ss_dssp             ----HSSCEEEEEECSCCH--------H---------------HHHHHHHHEEE---EEEEEECCCC
T ss_pred             ----cCCCCCEEEECCCCH--------H---------------HHHHHHHHHhc---CCEEEEEecC
Confidence                124699999999841        1               12334455543   4899999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.27  E-value=0.001  Score=62.02  Aligned_cols=78  Identities=15%  Similarity=0.181  Sum_probs=55.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+| +|++|...+..+...|++|+++++++++++.+. ++     +...   .+| .+.+++.+.+.++.    
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~-~~~~~~~~~v~~~~----  253 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-AL-----GADH---GIN-RLEEDWVERVYALT----  253 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HH-----TCSE---EEE-TTTSCHHHHHHHHH----
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-Hc-----CCCE---EEc-CCcccHHHHHHHHh----
Confidence            378999999 899999999999999999999999988776543 33     3221   234 43333433333332    


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ...++|+++.++|
T Consensus       254 ---~g~g~D~vid~~g  266 (363)
T 3uog_A          254 ---GDRGADHILEIAG  266 (363)
T ss_dssp             ---TTCCEEEEEEETT
T ss_pred             ---CCCCceEEEECCC
Confidence               2347999999998

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.21  E-value=0.0003  Score=64.70  Aligned_cols=75  Identities=19%  Similarity=0.177  Sum_probs=50.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      +|+|+||+||+|...+..+...|++|+++++++++.+.+. ++     +...   .+|..+.+  .+..+++        
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~---~i~~~~~~--~~~~~~~--------  212 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKE---VLAREDVM--AERIRPL--------  212 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSE---EEECC-----------C--------
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc-----CCcE---EEecCCcH--HHHHHHh--------
Confidence            7999999999999999999899999999999988776553 22     2221   23444432  1111111        


Q ss_pred             CCCCccEEEecccc
Q 017580          145 MHSSIQLLINNAGI  158 (369)
Q Consensus       145 ~~~~id~lv~nAG~  158 (369)
                      ..+++|++|+++|.
T Consensus       213 ~~~~~d~vid~~g~  226 (328)
T 1xa0_A          213 DKQRWAAAVDPVGG  226 (328)
T ss_dssp             CSCCEEEEEECSTT
T ss_pred             cCCcccEEEECCcH
Confidence            22479999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.20  E-value=0.00027  Score=56.77  Aligned_cols=44  Identities=16%  Similarity=0.186  Sum_probs=39.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      +++++|.|+ |++|..+++.|.+.|++|++++|++++.+++.+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            689999997 99999999999999999999999998887776665

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.19  E-value=0.00028  Score=64.03  Aligned_cols=97  Identities=16%  Similarity=0.180  Sum_probs=61.3

Q ss_pred             CCCCE-EEEeCCCC-----------------c-hHHHHHHHHHHCCCEEEEEeCCcchHH------H--HHHHHHhh-cC
Q 017580           61 IKRPV-CIVTGATS-----------------G-LGAAAAYALSREGFHVVLVGRSSHLLS------E--TMADITSR-NK  112 (369)
Q Consensus        61 ~~~k~-vlITGas~-----------------g-IG~~~a~~La~~G~~Vvl~~r~~~~~~------~--~~~~~~~~-~~  112 (369)
                      +.||. ||||+|..                 | .|.++|+.++++|+.|+++.+...-..      .  ..+.+... ..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            45666 99998865                 6 999999999999999999988533100      0  01111100 01


Q ss_pred             CCcEEEEEecCCChHHHHHHHHHHH---------------------------HHHhccCCCCCccEEEecccccc
Q 017580          113 DARLEAFQVDLSSFQSVLKFKDSLQ---------------------------QWLLDSDMHSSIQLLINNAGILA  160 (369)
Q Consensus       113 ~~~v~~~~~Dls~~~~i~~~~~~i~---------------------------~~~~~~~~~~~id~lv~nAG~~~  160 (369)
                      +..+..+.+|+.+.+++.+.+.+..                           ..+.   ..+..|++|.+|++..
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~---~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALN---PLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHG---GGGGGEEEEECSBCCS
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhh---ccCCCCEEEECCchhh
Confidence            1235567777777776666665432                           1111   2467999999999863

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.18  E-value=0.0014  Score=61.52  Aligned_cols=76  Identities=20%  Similarity=0.250  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+|+||..++..+...|++|++++ ++++.+.+ +++     +..   ..+|..+.+-    .+++.+   
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~---~v~~~~~~~~----~~~~~~---  245 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL-----GAD---DVIDYKSGSV----EEQLKS---  245 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT-----TCS---EEEETTSSCH----HHHHHT---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc-----CCC---EEEECCchHH----HHHHhh---
Confidence            488999999999999999999989999999888 44554433 222     222   1235554332    233332   


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                          .+++|++|+++|.
T Consensus       246 ----~~g~D~vid~~g~  258 (375)
T 2vn8_A          246 ----LKPFDFILDNVGG  258 (375)
T ss_dssp             ----SCCBSEEEESSCT
T ss_pred             ----cCCCCEEEECCCC
Confidence                2579999999984

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.16  E-value=0.0034  Score=58.30  Aligned_cols=79  Identities=23%  Similarity=0.235  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCC--ChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS--SFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls--~~~~i~~~~~~i~~  138 (369)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++.+.+. ++     +.. .  .+|..  +.++   +.+++.+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~--vi~~~~~~~~~---~~~~i~~  237 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-L--VLQISKESPQE---IARKVEG  237 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-E--EEECSSCCHHH---HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-E--EEcCcccccch---HHHHHHH
Confidence            3789999996 8999999988888999 9999999987765443 22     222 1  23444  2222   2333333


Q ss_pred             HHhccCCCCCccEEEecccc
Q 017580          139 WLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~  158 (369)
                      ..    . +++|++|.++|.
T Consensus       238 ~~----~-~g~D~vid~~g~  252 (356)
T 1pl8_A          238 QL----G-CKPEVTIECTGA  252 (356)
T ss_dssp             HH----T-SCCSEEEECSCC
T ss_pred             Hh----C-CCCCEEEECCCC
Confidence            21    2 569999999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.12  E-value=0.0014  Score=61.26  Aligned_cols=106  Identities=17%  Similarity=0.171  Sum_probs=67.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++.+.+ +++     +..   ...|.++.+-    .+.+.+..
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~---~vi~~~~~~~----~~~i~~~~  247 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV-----GAT---ATVDPSAGDV----VEAIAGPV  247 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCS---EEECTTSSCH----HHHHHSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCC---EEECCCCcCH----HHHHHhhh
Confidence            3789999998 8999999988888999 899999988776543 333     322   2245555432    22222100


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                      . . ..+++|+++.++|..        +               ..+..+..++.   .|++|.++...+
T Consensus       248 ~-~-~~gg~Dvvid~~G~~--------~---------------~~~~~~~~l~~---~G~vv~~G~~~~  288 (370)
T 4ej6_A          248 G-L-VPGGVDVVIECAGVA--------E---------------TVKQSTRLAKA---GGTVVILGVLPQ  288 (370)
T ss_dssp             S-S-STTCEEEEEECSCCH--------H---------------HHHHHHHHEEE---EEEEEECSCCCT
T ss_pred             h-c-cCCCCCEEEECCCCH--------H---------------HHHHHHHHhcc---CCEEEEEeccCC
Confidence            0 0 235899999998841        1               12334444443   489999886543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.12  E-value=0.0033  Score=58.08  Aligned_cols=77  Identities=19%  Similarity=0.257  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~--G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .|++|+|+|| |+||...+..+...  |++|+++++++++.+.+. ++     +...   .+|..+.   .+..+++.  
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~---~~~~~~~~--  234 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-----GADY---VSEMKDA---ESLINKLT--  234 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-----TCSE---EECHHHH---HHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-----CCCE---Eeccccc---hHHHHHhh--
Confidence            3789999999 89999999888888  999999999988766543 23     2221   1233320   12223332  


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ...++|++|.++|.
T Consensus       235 -----~g~g~D~vid~~g~  248 (344)
T 2h6e_A          235 -----DGLGASIAIDLVGT  248 (344)
T ss_dssp             -----TTCCEEEEEESSCC
T ss_pred             -----cCCCccEEEECCCC
Confidence                 22379999999984

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.11  E-value=0.0013  Score=56.61  Aligned_cols=73  Identities=14%  Similarity=0.117  Sum_probs=56.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      .++|.|+ |.+|..+|+.|.++|++|++++++++..+++.+..       .+.++..|.++++.++++            
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~~~l~~a------------   61 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHKEILRDA------------   61 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSHHHHHHH------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCHHHHHhc------------
Confidence            3889997 88999999999999999999999988776554321       356889999998765532            


Q ss_pred             CCCCccEEEeccc
Q 017580          145 MHSSIQLLINNAG  157 (369)
Q Consensus       145 ~~~~id~lv~nAG  157 (369)
                      .....|++|.+.+
T Consensus        62 ~i~~ad~vi~~~~   74 (218)
T 3l4b_C           62 EVSKNDVVVILTP   74 (218)
T ss_dssp             TCCTTCEEEECCS
T ss_pred             CcccCCEEEEecC
Confidence            2346788887664

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.11  E-value=0.007  Score=55.46  Aligned_cols=119  Identities=13%  Similarity=0.054  Sum_probs=78.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCC--CcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD--ARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+.+.|+|+ |.+|..+|..|+..|.  +|++.++++++++....++....+-  ..+....-|.   +           
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~---~-----------   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY---E-----------   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG---G-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH---H-----------
Confidence            457999996 9999999999999997  8999999998888877777654221  2333333221   1           


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                            ....-|++|..||.... +..+.   .+.++.|.--...+.+.    +.+....+.|+++|.....
T Consensus        70 ------a~~~aDvVvi~ag~p~k-pG~~R---~dL~~~N~~Iv~~i~~~----I~~~~p~a~vlvvtNPvd~  127 (326)
T 3pqe_A           70 ------DCKDADIVCICAGANQK-PGETR---LELVEKNLKIFKGIVSE----VMASGFDGIFLVATNPVDI  127 (326)
T ss_dssp             ------GGTTCSEEEECCSCCCC-TTCCH---HHHHHHHHHHHHHHHHH----HHHTTCCSEEEECSSSHHH
T ss_pred             ------HhCCCCEEEEecccCCC-CCccH---HHHHHHHHHHHHHHHHH----HHHhcCCeEEEEcCChHHH
Confidence                  12458999999997422 22222   33466666554444444    4433336789888876543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.11  E-value=0.008  Score=54.83  Aligned_cols=119  Identities=16%  Similarity=0.178  Sum_probs=74.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           65 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .|.|+||+|.+|..++..|+..|  .+|+++++++  .+....++.......++....    ..++.++.          
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a----------   65 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDC----------   65 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHH----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHH----------
Confidence            48999999999999999999998  5899999987  344444554322122222221    01122211          


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                         ....|++|+.||..... ..+.   .+.+..|+-....+++.+.++-    ..++||++|-....
T Consensus        66 ---~~~aDvVvi~ag~~~~~-g~~r---~dl~~~n~~i~~~i~~~i~~~~----p~a~viv~sNPv~~  122 (314)
T 1mld_A           66 ---LKGCDVVVIPAGVPRKP-GMTR---DDLFNTNATIVATLTAACAQHC----PDAMICIISNPVNS  122 (314)
T ss_dssp             ---HTTCSEEEECCSCCCCT-TCCG---GGGHHHHHHHHHHHHHHHHHHC----TTSEEEECSSCHHH
T ss_pred             ---hCCCCEEEECCCcCCCC-CCcH---HHHHHHHHHHHHHHHHHHHhhC----CCeEEEEECCCcch
Confidence               13489999999975322 2222   2346777776666666655442    25799998776554

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.11  E-value=0.0027  Score=58.32  Aligned_cols=62  Identities=18%  Similarity=0.200  Sum_probs=53.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++++.                   .+.+.+++.+++.+|..++..+.
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~  110 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  110 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEe
Confidence            56889999998 6899999999999997 899988753                   67888888898888888888887


Q ss_pred             ecC
Q 017580          121 VDL  123 (369)
Q Consensus       121 ~Dl  123 (369)
                      .++
T Consensus       111 ~~i  113 (340)
T 3rui_A          111 LSI  113 (340)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            765

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.10  E-value=0.0056  Score=56.04  Aligned_cols=120  Identities=16%  Similarity=0.168  Sum_probs=75.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhc----CCCcEEEEEecCCChHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ++...+.|+|| |.+|.+++..|+..|. +|++.++++++++....++....    ...++.. ..|   .+        
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~--------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA--------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG--------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH--------
Confidence            34567999998 9999999999999998 99999999988876665665431    1223322 122   22        


Q ss_pred             HHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                               ....-|++|..||..... ..+.   .+.+..|.--...    +.+.+.+....+.++++|.....
T Consensus        72 ---------a~~~aDiVIiaag~p~k~-G~~R---~dl~~~N~~i~~~----i~~~i~~~~p~a~iivvtNPvd~  129 (324)
T 3gvi_A           72 ---------AIEGADVVIVTAGVPRKP-GMSR---DDLLGINLKVMEQ----VGAGIKKYAPEAFVICITNPLDA  129 (324)
T ss_dssp             ---------GGTTCSEEEECCSCCCC---------CHHHHHHHHHHHH----HHHHHHHHCTTCEEEECCSSHHH
T ss_pred             ---------HHCCCCEEEEccCcCCCC-CCCH---HHHHHhhHHHHHH----HHHHHHHHCCCeEEEecCCCcHH
Confidence                     124589999999974221 1221   2345556544444    44444433335789998876544

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.10  E-value=0.0028  Score=59.23  Aligned_cols=79  Identities=15%  Similarity=0.304  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCCh-HHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~i~~~~~~i~~~  139 (369)
                      .|++|+|+|+ |+||...+......|+ +|+++++++++.+.+. ++     +..   ..+|..+. +++.+.+.++   
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~---~vi~~~~~~~~~~~~i~~~---  257 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GAT---ECLNPKDYDKPIYEVICEK---  257 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCS---EEECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCc---EEEecccccchHHHHHHHH---
Confidence            3789999996 8999999988888899 8999999988876543 22     322   12344421 2233323222   


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+++|++|.++|.
T Consensus       258 -----t~gg~Dvvid~~g~  271 (373)
T 1p0f_A          258 -----TNGGVDYAVECAGR  271 (373)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----hCCCCCEEEECCCC
Confidence                 22579999999985

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.02  E-value=0.0013  Score=61.27  Aligned_cols=76  Identities=17%  Similarity=0.289  Sum_probs=51.4

Q ss_pred             CCCCEEEEeCCCCchHHHH-HHHH-HHCCCE-EEEEeCCcc---hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAA-AYAL-SREGFH-VVLVGRSSH---LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~-a~~L-a~~G~~-Vvl~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      +++++|+|+|| |++|... +..+ ...|++ |++++++++   +.+.+. ++     +.  ..+  |..+.+ +.+ +.
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l-----Ga--~~v--~~~~~~-~~~-i~  237 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL-----DA--TYV--DSRQTP-VED-VP  237 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT-----TC--EEE--ETTTSC-GGG-HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc-----CC--ccc--CCCccC-HHH-HH
Confidence            34589999999 9999999 7666 577996 999999987   765543 22     32  222  555432 222 22


Q ss_pred             HHHHHHhccCCCCCccEEEecccc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~  158 (369)
                      ++ .        +++|++|.++|.
T Consensus       238 ~~-~--------gg~Dvvid~~g~  252 (357)
T 2b5w_A          238 DV-Y--------EQMDFIYEATGF  252 (357)
T ss_dssp             HH-S--------CCEEEEEECSCC
T ss_pred             Hh-C--------CCCCEEEECCCC
Confidence            22 2        379999999984

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.01  E-value=0.0043  Score=56.82  Aligned_cols=122  Identities=13%  Similarity=0.157  Sum_probs=72.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.+++.+.|+|+ |++|..+|..|+..|.  +|++.++++++++....++....+ ...+....-|   .+         
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~~---------   72 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---YS---------   72 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---GG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---HH---------
Confidence            345678999997 9999999999999997  899999999888887777765321 0123332222   11         


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                              ....-|++|..||.... +..+   -.+.++.|.--    ++.+.+.+.+....+.++++|.....
T Consensus        73 --------a~~~aDiVvi~ag~~~k-pG~t---R~dL~~~N~~I----~~~i~~~i~~~~p~a~ilvvtNPvdi  130 (326)
T 3vku_A           73 --------DAKDADLVVITAGAPQK-PGET---RLDLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANPVDI  130 (326)
T ss_dssp             --------GGTTCSEEEECCCCC--------------------C----HHHHHHHHHTTTCCSEEEECSSSHHH
T ss_pred             --------HhcCCCEEEECCCCCCC-CCch---HHHHHHHHHHH----HHHHHHHHHhcCCceEEEEccCchHH
Confidence                    12458999999997421 1122   22345556533    34444555544446888888875543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.00  E-value=0.014  Score=52.65  Aligned_cols=118  Identities=15%  Similarity=0.140  Sum_probs=74.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .+.|+|| |.+|.++|..|+..|.  +|+++++++++++....++....  ......+...  +|.+.            
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a------------   66 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL------------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH------------
Confidence            4789999 9999999999999997  99999999988765444443321  1112222222  12221            


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                           ...-|++|..||.... +..+..   +.++.|.    -+++.+.+.+.+....+.|+++|.....
T Consensus        67 -----~~~aDiVViaag~~~k-pG~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~iivvsNPvd~  123 (294)
T 1oju_A           67 -----LKGSEIIVVTAGLARK-PGMTRL---DLAHKNA----GIIKDIAKKIVENAPESKILVVTNPMDV  123 (294)
T ss_dssp             -----GTTCSEEEECCCCCCC-SSCCHH---HHHHHHH----HHHHHHHHHHHTTSTTCEEEECSSSHHH
T ss_pred             -----hCCCCEEEECCCCCCC-CCCcHH---HHHHHHH----HHHHHHHHHHHhhCCCeEEEEeCCcchH
Confidence                 2358999999997522 223332   3455564    3445555555555446888888875543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.00  E-value=0.0019  Score=60.16  Aligned_cols=78  Identities=18%  Similarity=0.152  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|| |++|...+..+... |++|+++++++++.+.+. ++     +..   ..+|..+.  +.+.+.++.   
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~---~vi~~~~~--~~~~v~~~~---  250 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GAD---HVVDARRD--PVKQVMELT---  250 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCS---EEEETTSC--HHHHHHHHT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCC---EEEeccch--HHHHHHHHh---
Confidence            3789999999 89999999888778 999999999987766543 22     222   12355543  322222221   


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ...++|++|.++|.
T Consensus       251 ----~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          251 ----RGRGVNVAMDFVGS  264 (359)
T ss_dssp             ----TTCCEEEEEESSCC
T ss_pred             ----CCCCCcEEEECCCC
Confidence                12379999999985

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.99  E-value=0.0083  Score=55.04  Aligned_cols=120  Identities=14%  Similarity=0.161  Sum_probs=79.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhh--cCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ..+.+.|+|+ |++|..+|..|+.+|.  +|++.++++++++....++...  ++... .....  .|.+          
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~-~i~~~--~d~~----------   83 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTP-KIVSS--KDYS----------   83 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCC-EEEEC--SSGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCC-eEEEc--CCHH----------
Confidence            4578999998 8999999999999997  8999999998888888777653  22211 22222  1222          


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                             ....-|++|..||.... +.++.   .+.++.|.-=...+.+.+..+    ...+.++++|.....
T Consensus        84 -------~~~~aDiVvi~aG~~~k-pG~tR---~dL~~~N~~I~~~i~~~i~~~----~p~a~vlvvtNPvdi  141 (331)
T 4aj2_A           84 -------VTANSKLVIITAGARQQ-EGESR---LNLVQRNVNIFKFIIPNVVKY----SPQCKLLIVSNPVDI  141 (331)
T ss_dssp             -------GGTTEEEEEECCSCCCC-TTCCG---GGGHHHHHHHHHHHHHHHHHH----CTTCEEEECSSSHHH
T ss_pred             -------HhCCCCEEEEccCCCCC-CCccH---HHHHHHHHHHHHHHHHHHHHH----CCCeEEEEecChHHH
Confidence                   12458999999997522 22332   345666765544455544443    235789999876543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.98  E-value=0.003  Score=58.28  Aligned_cols=77  Identities=18%  Similarity=0.173  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|+|+ |++|...+..+...|++|+++++++++.+.+. ++     +...   .+|..+.+..+.    +.+   
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---~i~~~~~~~~~~----~~~---  228 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RL-----GAEV---AVNARDTDPAAW----LQK---  228 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCSE---EEETTTSCHHHH----HHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCCcCHHHH----HHH---
Confidence            4789999997 89999999988889999999999988766543 22     2221   245555333222    222   


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+++|+++.++|.
T Consensus       229 ---~~g~~d~vid~~g~  242 (340)
T 3s2e_A          229 ---EIGGAHGVLVTAVS  242 (340)
T ss_dssp             ---HHSSEEEEEESSCC
T ss_pred             ---hCCCCCEEEEeCCC
Confidence               12479999999873

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.95  E-value=0.0044  Score=57.93  Aligned_cols=78  Identities=12%  Similarity=0.175  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+|++|...+......|++|+.++ ++++.+.+ +++     +..   ..+|..+.+ +   .+.+++.  
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~---~vi~~~~~~-~---~~~v~~~--  227 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA-KSR-----GAE---EVFDYRAPN-L---AQTIRTY--  227 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT-----TCS---EEEETTSTT-H---HHHHHHH--
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHH-HHc-----CCc---EEEECCCch-H---HHHHHHH--
Confidence            589999999999999999999999999999887 56655432 232     222   123555433 2   2333332  


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+++|+++.++|.
T Consensus       228 ---t~g~~d~v~d~~g~  241 (371)
T 3gqv_A          228 ---TKNNLRYALDCITN  241 (371)
T ss_dssp             ---TTTCCCEEEESSCS
T ss_pred             ---ccCCccEEEECCCc
Confidence               23569999999985

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.92  E-value=0.031  Score=50.00  Aligned_cols=43  Identities=21%  Similarity=0.280  Sum_probs=37.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            46777776 77999999999999999999999999888777664

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.90  E-value=0.0028  Score=58.98  Aligned_cols=39  Identities=26%  Similarity=0.169  Sum_probs=34.0

Q ss_pred             CC-CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchH
Q 017580           62 KR-PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLL  100 (369)
Q Consensus        62 ~~-k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~  100 (369)
                      .| ++|+|+||+|++|...+......|++|++++++.++.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~  205 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL  205 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCcccc
Confidence            37 8999999999999999888888899999998877653

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.90  E-value=0.003  Score=59.85  Aligned_cols=47  Identities=23%  Similarity=0.385  Sum_probs=41.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++.|++++|.|+ |++|..+++.+...|+ +|++++|+.+++++..+++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            367999999998 9999999999999999 9999999988776666554

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.89  E-value=0.0042  Score=57.34  Aligned_cols=121  Identities=13%  Similarity=0.141  Sum_probs=74.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhh-cCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSR-NKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      ++++.|.|+|++|.+|..+|..++.+|.  +|+++++++++++....++... ++..++.+ .   ++..   +   .+ 
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~~---~---al-   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDIK---E---AL-   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCHH---H---HH-
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCHH---H---Hh-
Confidence            3467899999999999999999999994  8999999998888777666553 22222221 1   1211   1   11 


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCe-EEEEcCCcc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR-IVNVTSFTH  209 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~-IV~vsS~~~  209 (369)
                               ..-|++|.+||.... +..+   -.+.++.|.--...+.+.+..+    ...+. |+++|....
T Consensus        75 ---------~dADvVvitaG~p~k-pG~~---R~dLl~~N~~I~~~i~~~i~~~----~p~a~~vlvvsNPvd  130 (343)
T 3fi9_A           75 ---------TDAKYIVSSGGAPRK-EGMT---REDLLKGNAEIAAQLGKDIKSY----CPDCKHVIIIFNPAD  130 (343)
T ss_dssp             ---------TTEEEEEECCC--------C---HHHHHHHHHHHHHHHHHHHHHH----CTTCCEEEECSSSHH
T ss_pred             ---------CCCCEEEEccCCCCC-CCCC---HHHHHHHHHHHHHHHHHHHHHh----ccCcEEEEEecCchH
Confidence                     348999999997421 1222   2345667765555554444333    32564 778876543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.89  E-value=0.0016  Score=60.53  Aligned_cols=82  Identities=13%  Similarity=0.375  Sum_probs=66.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+++.+.+.+|..++..+.
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  194 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA  194 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence            45789999998 7899999999999997 899998753                   47788888888888899999999


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      .++++..++..              ....|++|.+..
T Consensus       195 ~~i~~~~~~~~--------------~~~~DlVvd~~D  217 (353)
T 3h5n_A          195 LNINDYTDLHK--------------VPEADIWVVSAD  217 (353)
T ss_dssp             CCCCSGGGGGG--------------SCCCSEEEECCC
T ss_pred             cccCchhhhhH--------------hccCCEEEEecC
Confidence            98887553221              245899988653

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.88  E-value=0.013  Score=53.45  Aligned_cols=119  Identities=14%  Similarity=0.143  Sum_probs=75.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhc----CCCcEEEEEecCCChHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.+.+.|+|+ |.+|..+|..|+..|. +|++.++++++++....++....    ...++.. .-|   .+         
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~-t~d---~~---------   69 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG-TND---YK---------   69 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESC---GG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE-cCC---HH---------
Confidence            3457888895 9999999999999998 99999999998877666665431    1223321 112   22         


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                              ....-|++|..||.... +..+.   .+.+..|.--...+.+.+..+    ...+.++++|.....
T Consensus        70 --------a~~~aDvVIi~ag~p~k-~G~~R---~dl~~~N~~i~~~i~~~i~~~----~p~a~vivvtNPvd~  127 (321)
T 3p7m_A           70 --------DLENSDVVIVTAGVPRK-PGMSR---DDLLGINIKVMQTVGEGIKHN----CPNAFVICITNPLDI  127 (321)
T ss_dssp             --------GGTTCSEEEECCSCCCC-TTCCH---HHHHHHHHHHHHHHHHHHHHH----CTTCEEEECCSSHHH
T ss_pred             --------HHCCCCEEEEcCCcCCC-CCCCH---HHHHHHhHHHHHHHHHHHHHH----CCCcEEEEecCchHH
Confidence                    12458999999997522 22332   234556655544444444333    335788888765543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.84  E-value=0.033  Score=50.95  Aligned_cols=119  Identities=15%  Similarity=0.075  Sum_probs=77.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhh--cCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+.+.|+|+ |.+|..+|..++..|.  +|++.++++++++....++...  .....-.....|..+             
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------------   86 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------------   86 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------------
Confidence            467999999 9999999999999997  8999999998888777666543  111111122334432             


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                             ...-|++|..||..... .++.   .+.+..|.--.-.+.+.+.++    ...+.++++|.....
T Consensus        87 -------~~daDiVIitaG~p~kp-G~tR---~dll~~N~~I~k~i~~~I~k~----~P~a~ilvvtNPvdi  143 (330)
T 3ldh_A           87 -------SAGSKLVVITAGARQQE-GESR---LNLVQRNVNIFKFIIPNIVKH----SPDCLKELHPELGTD  143 (330)
T ss_dssp             -------CSSCSEEEECCSCCCCS-SCCT---TGGGHHHHHHHHHHHHHHHHH----CTTCEEEECSSSHHH
T ss_pred             -------hCCCCEEEEeCCCCCCC-CCCH---HHHHHhhHHHHHHHHHHHHhh----CCCceEEeCCCccHH
Confidence                   34689999999975322 2222   234555654444444444333    335789988876543

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.83  E-value=0.0073  Score=59.45  Aligned_cols=62  Identities=18%  Similarity=0.200  Sum_probs=54.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++.+|+|.|+ ||+|.++|+.|+..|. ++++++++.                   .+.+.+++.+++.+|..++..+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~  402 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  402 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence            56789999998 6899999999999997 899998754                   67888899999998888888888


Q ss_pred             ecC
Q 017580          121 VDL  123 (369)
Q Consensus       121 ~Dl  123 (369)
                      .++
T Consensus       403 ~~I  405 (615)
T 4gsl_A          403 LSI  405 (615)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            765

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.82  E-value=0.0035  Score=61.62  Aligned_cols=63  Identities=17%  Similarity=0.166  Sum_probs=53.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEE
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  119 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~  119 (369)
                      .++++.|+|.|+ ||+|.++|+.|+..|. ++.+++.+                   ..+.+.+++.+++.+++.++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            356789999998 5899999999999998 89999654                   36888899999998888888888


Q ss_pred             EecC
Q 017580          120 QVDL  123 (369)
Q Consensus       120 ~~Dl  123 (369)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            8765

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.79  E-value=0.006  Score=57.20  Aligned_cols=80  Identities=14%  Similarity=0.216  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCC--ChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS--SFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls--~~~~i~~~~~~i~~  138 (369)
                      .|++|+|+| +|++|...+..+...| ++|+++++++++.+.+. ++     +.. .+  +|..  +.+++   .+++++
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~~---~~~v~~  261 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GAD-LT--LNRRETSVEER---RKAIMD  261 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCS-EE--EETTTSCHHHH---HHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCc-EE--EeccccCcchH---HHHHHH
Confidence            378999999 8999999999888899 59999999987766543 22     222 12  3433  13333   333433


Q ss_pred             HHhccCCCCCccEEEecccc
Q 017580          139 WLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~  158 (369)
                      ..    ...++|++|+++|.
T Consensus       262 ~~----~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          262 IT----HGRGADFILEATGD  277 (380)
T ss_dssp             HT----TTSCEEEEEECSSC
T ss_pred             Hh----CCCCCcEEEECCCC
Confidence            21    12369999999984

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.78  E-value=0.003  Score=58.74  Aligned_cols=75  Identities=19%  Similarity=0.235  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+|+ |+||...+..+...|++|+++++++++.+.+.+++     +...   ..|..+.+.       +.+   
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---vi~~~~~~~-------~~~---  240 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-----GADD---YVIGSDQAK-------MSE---  240 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-----CCSC---EEETTCHHH-------HHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-----CCce---eeccccHHH-------HHH---
Confidence            4789999996 99999999888888999999999988765544232     2221   134444332       222   


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+++|+++.++|.
T Consensus       241 ---~~~g~D~vid~~g~  254 (357)
T 2cf5_A          241 ---LADSLDYVIDTVPV  254 (357)
T ss_dssp             ---STTTEEEEEECCCS
T ss_pred             ---hcCCCCEEEECCCC
Confidence               22479999999985

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.78  E-value=0.0019  Score=60.64  Aligned_cols=79  Identities=11%  Similarity=0.103  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~  139 (369)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++++.+. ++     +...   .+|..+ .+++.+.+.++   
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~~~~~~~~i~~~---  259 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-KF-----GVNE---FVNPKDHDKPIQEVIVDL---  259 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-TT-----TCCE---EECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCcE---EEccccCchhHHHHHHHh---
Confidence            3789999998 9999999988888999 8999999998876442 22     2221   244442 23333333332   


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+++|++|.++|.
T Consensus       260 -----~~gg~D~vid~~g~  273 (378)
T 3uko_A          260 -----TDGGVDYSFECIGN  273 (378)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----cCCCCCEEEECCCC
Confidence                 23589999999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.72  E-value=0.0051  Score=58.23  Aligned_cols=79  Identities=16%  Similarity=0.236  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++.+.+. ++     +..   ..+|..+.+-    .+++++..
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~---~vi~~~~~~~----~~~i~~~t  278 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-EL-----GAD---HVIDPTKENF----VEAVLDYT  278 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HH-----TCS---EEECTTTSCH----HHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hc-----CCC---EEEcCCCCCH----HHHHHHHh
Confidence            4789999998 8999999988888999 8999999987766543 33     322   1235544332    23333321


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ...++|+++.++|.
T Consensus       279 ----~g~g~D~vid~~g~  292 (404)
T 3ip1_A          279 ----NGLGAKLFLEATGV  292 (404)
T ss_dssp             ----TTCCCSEEEECSSC
T ss_pred             ----CCCCCCEEEECCCC
Confidence                23479999999985

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.72  E-value=0.0034  Score=57.42  Aligned_cols=41  Identities=27%  Similarity=0.387  Sum_probs=36.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      |+ |+|+||+|++|...+..+...|++|+++++++++.+.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            46 999999999999999999999999999999988876654

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.69  E-value=0.0012  Score=59.14  Aligned_cols=44  Identities=27%  Similarity=0.366  Sum_probs=38.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETM  104 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~  104 (369)
                      +++++.++|.|+ ||.|++++..|++.|+ +|+++.|+.++++++.
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            357899999998 6999999999999998 9999999988766554

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.69  E-value=0.0041  Score=57.97  Aligned_cols=78  Identities=12%  Similarity=0.203  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-CCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~-~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+||+|++|...+..+.. .|++|+++++++++.+.+.+ +     +...   .+|..+  +   +.+.+++. 
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-l-----Gad~---vi~~~~--~---~~~~v~~~-  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-L-----GAHH---VIDHSK--P---LAAEVAAL-  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-T-----TCSE---EECTTS--C---HHHHHHTT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-c-----CCCE---EEeCCC--C---HHHHHHHh-
Confidence            478999999999999887765554 58999999999877665432 2     2221   234433  2   23333331 


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+++|+++.++|.
T Consensus       236 ----~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          236 ----GLGAPAFVFSTTHT  249 (363)
T ss_dssp             ----CSCCEEEEEECSCH
T ss_pred             ----cCCCceEEEECCCc
Confidence                23589999999884

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.65  E-value=0.025  Score=51.49  Aligned_cols=119  Identities=23%  Similarity=0.244  Sum_probs=75.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC--cchHHHHHHHHHhhc----CCCcEEEEEecCCChHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS--SHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~--~~~~~~~~~~~~~~~----~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      +.+.+.|+|+ |.+|..+|..|+..|. +|++.+++  +++.+....++....    ...++.. .-|   .+       
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~~-------   74 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---YA-------   74 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---GG-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---HH-------
Confidence            4578999997 9999999999999999 99999999  555555555544321    1222222 112   11       


Q ss_pred             HHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                                .....|++|.+||.... +..+.   .+.++.|.--.-.+.+.+..+    ...+.|+++|.....
T Consensus        75 ----------a~~~aDvVIiaag~p~k-pg~~R---~dl~~~N~~i~~~i~~~i~~~----~p~a~vlvvsNPvd~  132 (315)
T 3tl2_A           75 ----------DTADSDVVVITAGIARK-PGMSR---DDLVATNSKIMKSITRDIAKH----SPNAIIVVLTNPVDA  132 (315)
T ss_dssp             ----------GGTTCSEEEECCSCCCC-TTCCH---HHHHHHHHHHHHHHHHHHHHH----CTTCEEEECCSSHHH
T ss_pred             ----------HhCCCCEEEEeCCCCCC-CCCCH---HHHHHHHHHHHHHHHHHHHHh----CCCeEEEECCChHHH
Confidence                      22458999999997522 22332   345666665544444444333    235788888875543

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.63  E-value=0.0032  Score=59.06  Aligned_cols=79  Identities=15%  Similarity=0.099  Sum_probs=53.6

Q ss_pred             CCEEEEeC-CCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTG-ATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITG-as~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |++++|.| |+|++|...+..+...|++|+.+++++++.+.+.+ +     +...   .+|..+.+ +.+.+.++..   
T Consensus       171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---~~~~~~~~-~~~~v~~~t~---  237 (379)
T 3iup_A          171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-Q-----GAVH---VCNAASPT-FMQDLTEALV---  237 (379)
T ss_dssp             TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-T-----TCSC---EEETTSTT-HHHHHHHHHH---
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-C-----CCcE---EEeCCChH-HHHHHHHHhc---
Confidence            67899987 89999999998888899999999999887665542 2     2221   23444433 2222222221   


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                          ..++|+++.++|.
T Consensus       238 ----~~g~d~v~d~~g~  250 (379)
T 3iup_A          238 ----STGATIAFDATGG  250 (379)
T ss_dssp             ----HHCCCEEEESCEE
T ss_pred             ----CCCceEEEECCCc
Confidence                1369999999985

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.62  E-value=0.0073  Score=56.93  Aligned_cols=80  Identities=20%  Similarity=0.150  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ |++|...+......|+ +|+++++++++++.+. ++     +.  .  .+|.++.+.+.+.+.++.   
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga--~--~i~~~~~~~~~~~v~~~t---  250 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-----GF--E--IADLSLDTPLHEQIAALL---  250 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TC--E--EEETTSSSCHHHHHHHHH---
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc-----CC--c--EEccCCcchHHHHHHHHh---
Confidence            3789999995 9999999888888899 7999999988766553 22     33  2  245554333322222221   


Q ss_pred             hccCCCCCccEEEeccccc
Q 017580          141 LDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~  159 (369)
                          ...++|++|.++|..
T Consensus       251 ----~g~g~Dvvid~~G~~  265 (398)
T 1kol_A          251 ----GEPEVDCAVDAVGFE  265 (398)
T ss_dssp             ----SSSCEEEEEECCCTT
T ss_pred             ----CCCCCCEEEECCCCc
Confidence                224799999999853

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.61  E-value=0.058  Score=49.63  Aligned_cols=123  Identities=13%  Similarity=0.079  Sum_probs=73.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCcc--hHHHHHHHHHhhcCCCcEEEEEecCCChHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVL  130 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~  130 (369)
                      +++.-.|.||||+|+||..++..|+....       .++|.+.++.  .++...-++..............+  +..   
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~~---   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DPR---   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CHH---
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--ChH---
Confidence            34566899999999999999999998753       7999998763  456666666543222222222221  211   


Q ss_pred             HHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-CCCCeEEEEcCCc
Q 017580          131 KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTSFT  208 (369)
Q Consensus       131 ~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~~g~IV~vsS~~  208 (369)
                         +          ....-|++|..||+.- .+.++.+   +.++.|.-=.    +.+.+.+.+. .....|+.+|...
T Consensus        96 ---~----------a~~~advVvi~aG~pr-kpGmtR~---DLl~~Na~I~----~~~~~~i~~~a~~~~~vlvvsNPv  153 (345)
T 4h7p_A           96 ---V----------AFDGVAIAIMCGAFPR-KAGMERK---DLLEMNARIF----KEQGEAIAAVAASDCRVVVVGNPA  153 (345)
T ss_dssp             ---H----------HTTTCSEEEECCCCCC-CTTCCHH---HHHHHHHHHH----HHHHHHHHHHSCTTCEEEECSSSH
T ss_pred             ---H----------HhCCCCEEEECCCCCC-CCCCCHH---HHHHHhHHHH----HHHHHHHHhhccCceEEEEeCCCc
Confidence               1          1345899999999752 2234443   4566675443    4444444432 1135677777643

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.61  E-value=0.011  Score=54.32  Aligned_cols=121  Identities=12%  Similarity=0.128  Sum_probs=75.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--E-----EEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF--H-----VVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~--~-----Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      ..|.||||+|.||..++..|+..|.  +     |++.++++  ++++....++...... -..-  ...++  ..   .+
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~-~~~~--~~~~~--~~---~~   75 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLKD--VIATD--KE---EI   75 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEEE--EEEES--CH---HH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc-ccCC--EEEcC--Cc---HH
Confidence            4699999999999999999999885  5     99999975  4666666677553111 1111  11111  11   11


Q ss_pred             HHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCC-eEEEEcCCccc
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTHR  210 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g-~IV~vsS~~~~  210 (369)
                                .....|++|+.||.... +..+   -.+.++.|+.....+++.+..+    ..++ +|+++|.....
T Consensus        76 ----------~~~daDvVvitAg~prk-pG~t---R~dll~~N~~i~~~i~~~i~~~----~~~~~~vivvsNPvd~  134 (333)
T 5mdh_A           76 ----------AFKDLDVAILVGSMPRR-DGME---RKDLLKANVKIFKCQGAALDKY----AKKSVKVIVVGNPANT  134 (333)
T ss_dssp             ----------HTTTCSEEEECCSCCCC-TTCC---TTTTHHHHHHHHHHHHHHHHHH----SCTTCEEEECSSSHHH
T ss_pred             ----------HhCCCCEEEEeCCCCCC-CCCC---HHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEcCCchHH
Confidence                      12458999999997522 1222   2346777877766665555443    2235 68888875543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.60  E-value=0.0076  Score=56.63  Aligned_cols=44  Identities=18%  Similarity=0.090  Sum_probs=39.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      .+.+.+|+|.|+ |.+|..+++.+...|++|++.++++.+++.+.
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            356789999999 79999999999999999999999998876654

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.59  E-value=0.009  Score=55.73  Aligned_cols=78  Identities=13%  Similarity=0.186  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++.+.+. ++     +.. .  .+|..+.+ +   .+++.+. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~--vi~~~~~~-~---~~~~~~~-  254 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GAT-H--VINSKTQD-P---VAAIKEI-  254 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCS-E--EEETTTSC-H---HHHHHHH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCC-E--EecCCccC-H---HHHHHHh-
Confidence            3789999996 8999999988888899 7999999988766543 33     222 1  23444332 2   2223321 


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+++|++|.++|.
T Consensus       255 ----~~gg~D~vid~~g~  268 (371)
T 1f8f_A          255 ----TDGGVNFALESTGS  268 (371)
T ss_dssp             ----TTSCEEEEEECSCC
T ss_pred             ----cCCCCcEEEECCCC
Confidence                22479999999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.58  E-value=0.0063  Score=56.55  Aligned_cols=75  Identities=15%  Similarity=0.217  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+|+ |++|...+..+...|++|+++++++++.+.+.+ +     +...   .+|..+.++   +.+++     
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---v~~~~~~~~---~~~~~-----  240 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADH---YIATLEEGD---WGEKY-----  240 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE---EEEGGGTSC---HHHHS-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c-----CCCE---EEcCcCchH---HHHHh-----
Confidence            3789999999 999999998888899999999999888766543 3     2221   134433311   11211     


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         . +++|++|.++|.
T Consensus       241 ---~-~~~D~vid~~g~  253 (360)
T 1piw_A          241 ---F-DTFDLIVVCASS  253 (360)
T ss_dssp             ---C-SCEEEEEECCSC
T ss_pred             ---h-cCCCEEEECCCC
Confidence               1 479999999985

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.57  E-value=0.011  Score=55.29  Aligned_cols=74  Identities=20%  Similarity=0.183  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+|+ |++|...+..+...|++|+++++++++.+.+.+ +     +..   ..+|..+.+.+    +++     
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l-----Ga~---~vi~~~~~~~~----~~~-----  254 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L-----GAD---EVVNSRNADEM----AAH-----  254 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCS---EEEETTCHHHH----HTT-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCc---EEeccccHHHH----HHh-----
Confidence            3789999998 899999998888899999999999888776543 3     322   12455554322    111     


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                          .+++|++|.++|.
T Consensus       255 ----~~g~Dvvid~~g~  267 (369)
T 1uuf_A          255 ----LKSFDFILNTVAA  267 (369)
T ss_dssp             ----TTCEEEEEECCSS
T ss_pred             ----hcCCCEEEECCCC
Confidence                1479999999985

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.55  E-value=0.0041  Score=57.51  Aligned_cols=42  Identities=26%  Similarity=0.313  Sum_probs=36.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      .|++|+|+|+ |+||...+..+...|++|+++++++++.+.+.
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  217 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL  217 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            3789999998 89999999988889999999999998876543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.54  E-value=0.0038  Score=55.49  Aligned_cols=43  Identities=28%  Similarity=0.373  Sum_probs=39.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      +++++|.|+ ||.|++++..|++.|.+|+++.|+.++.+++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            789999997 89999999999999999999999999988877 54

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.49  E-value=0.0088  Score=56.40  Aligned_cols=79  Identities=18%  Similarity=0.195  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++++.+. +   .  +.  .  .+|..+.+.+.+.+.++.   
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---l--Ga--~--~i~~~~~~~~~~~~~~~~---  250 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-D---A--GF--E--TIDLRNSAPLRDQIDQIL---  250 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-T---T--TC--E--EEETTSSSCHHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---c--CC--c--EEcCCCcchHHHHHHHHh---
Confidence            3789999997 9999999888877899 9999999988765442 2   1  33  2  245554332122222221   


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ...++|++|.++|.
T Consensus       251 ----~g~g~Dvvid~~g~  264 (398)
T 2dph_A          251 ----GKPEVDCGVDAVGF  264 (398)
T ss_dssp             ----SSSCEEEEEECSCT
T ss_pred             ----CCCCCCEEEECCCC
Confidence                12369999999985

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.47  E-value=0.057  Score=49.15  Aligned_cols=118  Identities=15%  Similarity=0.204  Sum_probs=72.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+.+.|+|+ |.+|..++..|+..|.  +|++.++++++++....++....+  +..+.+.. |  +.+           
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~~-----------   70 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DYD-----------   70 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CGG-----------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cHH-----------
Confidence            357999999 9999999999999885  899999998776665555554322  11333332 2  222           


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                            ....-|++|.++|+..... .+.   .+.+..|.    -+.+.+.+.+.+....+.++++|-...
T Consensus        71 ------al~~aDvViia~~~~~~~g-~~r---~dl~~~n~----~i~~~i~~~i~~~~p~a~~iv~tNPv~  127 (316)
T 1ldn_A           71 ------DCRDADLVVICAGANQKPG-ETR---LDLVDKNI----AIFRSIVESVMASGFQGLFLVATNPVD  127 (316)
T ss_dssp             ------GTTTCSEEEECCSCCCCTT-TCS---GGGHHHHH----HHHHHHHHHHHHHTCCSEEEECSSSHH
T ss_pred             ------HhCCCCEEEEcCCCCCCCC-CCH---HHHHHcCh----HHHHHHHHHHHHHCCCCEEEEeCCchH
Confidence                  1245899999999853222 222   12344443    334444444444332567777765443

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.43  E-value=0.0052  Score=53.34  Aligned_cols=72  Identities=11%  Similarity=-0.006  Sum_probs=54.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .+.++|.|+ |.+|..+++.|.+.|+ |++++++++..+.+.         ..+.++..|.++++.++++          
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a----------   67 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKA----------   67 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHT----------
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhc----------
Confidence            357899998 8999999999999999 999999987665442         1367889999998755432          


Q ss_pred             cCCCCCccEEEeccc
Q 017580          143 SDMHSSIQLLINNAG  157 (369)
Q Consensus       143 ~~~~~~id~lv~nAG  157 (369)
                        .....|.+|.+.+
T Consensus        68 --~i~~ad~vi~~~~   80 (234)
T 2aef_A           68 --NVRGARAVIVDLE   80 (234)
T ss_dssp             --TCTTCSEEEECCS
T ss_pred             --CcchhcEEEEcCC
Confidence              2345788887654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.41  E-value=0.0094  Score=54.42  Aligned_cols=74  Identities=12%  Similarity=0.200  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++++|+||+|++|...+..+...|++|+.++++. +. +..+++     +...   ..|..+.+.+       .+   
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~l-----Ga~~---~i~~~~~~~~-------~~---  211 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKAL-----GAEQ---CINYHEEDFL-------LA---  211 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHH-----TCSE---EEETTTSCHH-------HH---
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHc-----CCCE---EEeCCCcchh-------hh---
Confidence            378999999999999999999999999999888543 32 223333     2221   2355443321       11   


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ...++|+++.++|.
T Consensus       212 ---~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          212 ---ISTPVDAVIDLVGG  225 (321)
T ss_dssp             ---CCSCEEEEEESSCH
T ss_pred             ---hccCCCEEEECCCc
Confidence               23569999999983

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.40  E-value=0.057  Score=49.19  Aligned_cols=120  Identities=13%  Similarity=0.172  Sum_probs=73.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +...|.|+|| |.+|..++..|+.+|.  +|++.++++++++....++....  .+..+.+.. |  +.+          
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~----------   70 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYS----------   70 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHH----------
Confidence            3457899999 9999999999999984  89999999887776555554321  112333332 2  222          


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                             ....-|++|..+|..... ..+.+   ..+..|.--.    +.+.+.+.+....+.|+++|.....
T Consensus        71 -------a~~~aDvVvi~ag~~~~~-g~~r~---dl~~~n~~i~----~~i~~~i~~~~p~a~viv~tNPv~~  128 (317)
T 3d0o_A           71 -------DCHDADLVVICAGAAQKP-GETRL---DLVSKNLKIF----KSIVGEVMASKFDGIFLVATNPVDI  128 (317)
T ss_dssp             -------GGTTCSEEEECCCCCCCT-TCCHH---HHHHHHHHHH----HHHHHHHHHTTCCSEEEECSSSHHH
T ss_pred             -------HhCCCCEEEECCCCCCCC-CCcHH---HHHHHHHHHH----HHHHHHHHHhCCCcEEEEecCcHHH
Confidence                   124589999999975321 22222   3345554443    4444444443336788887765543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.38  E-value=0.04  Score=50.10  Aligned_cols=118  Identities=16%  Similarity=0.185  Sum_probs=73.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .+.|+|+ |.+|..+|..|+..|.  +|++.++++++++....++....  ....+.+...|  +.+             
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~-------------   65 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG-------------   65 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG-------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH-------------
Confidence            4788997 9999999999999997  89999999988877666665421  11122232222  122             


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                          ....-|++|..||..... .++   -.+.++.|.--    ++.+.+.+.+....+.|+++|.....
T Consensus        66 ----a~~~aDvVii~ag~~~kp-G~~---R~dl~~~N~~i----~~~i~~~i~~~~p~a~vivvtNPvd~  123 (314)
T 3nep_X           66 ----PTEDSDVCIITAGLPRSP-GMS---RDDLLAKNTEI----VGGVTEQFVEGSPDSTIIVVANPLDV  123 (314)
T ss_dssp             ----GGTTCSEEEECCCC-----------CHHHHHHHHHH----HHHHHHHHHTTCTTCEEEECCSSHHH
T ss_pred             ----HhCCCCEEEECCCCCCCC-CCC---HHHHHHhhHHH----HHHHHHHHHHhCCCcEEEecCCchhH
Confidence                224589999999975221 122   22345556543    45555555554446888888876543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.35  E-value=0.005  Score=52.49  Aligned_cols=43  Identities=23%  Similarity=0.309  Sum_probs=37.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++.|+||+|.+|.++++.|++.|++|++++|++++.+.+.+++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            4789999999999999999999999999999988776665543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.35  E-value=0.0015  Score=58.54  Aligned_cols=43  Identities=19%  Similarity=0.248  Sum_probs=37.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSET  103 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~  103 (369)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            356899999998 7999999999999999 899999998875544

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.29  E-value=0.037  Score=49.76  Aligned_cols=114  Identities=17%  Similarity=0.155  Sum_probs=74.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEe-cCCChHHHHHHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQV-DLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~-Dls~~~~i~~~~~~i~~~~  140 (369)
                      |.|+|| |+||..+|..|+.+|.  ++++.+.++++.+....++....+  +........ |.   +.            
T Consensus         3 V~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~---~~------------   66 (294)
T 2x0j_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SL------------   66 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG---GG------------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH---HH------------
Confidence            677896 9999999999999985  899999998887777777755211  222223322 32   21            


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                           ...-|++|..||... .+.++.+   +.++.|.-    +++.+.+.+.+...++.|+.||...
T Consensus        67 -----~~~aDvVvitAG~pr-kpGmtR~---dLl~~Na~----I~~~i~~~i~~~~p~aivlvvsNPv  121 (294)
T 2x0j_A           67 -----LKGSEIIVVTAGLAR-KPGMTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVTNPM  121 (294)
T ss_dssp             -----GTTCSEEEECCCCCC-CSSSCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred             -----hCCCCEEEEecCCCC-CCCCchH---HHHHHHHH----HHHHHHHHHHhcCCceEEEEecCcc
Confidence                 134799999999752 2234443   34666654    4555666665555467788887654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.28  E-value=0.0061  Score=56.44  Aligned_cols=79  Identities=11%  Similarity=0.116  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|+ |+||...+......|+ +|+++++++++++.+. ++     +..   ..+|..+.+-    .+++.+..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~---~vi~~~~~~~----~~~v~~~t  231 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EY-----GAT---DIINYKNGDI----VEQILKAT  231 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HH-----TCC---EEECGGGSCH----HHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-Hh-----CCc---eEEcCCCcCH----HHHHHHHc
Confidence            3789999996 8999999988888899 8999999887765443 33     322   1234444332    23333321


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ...++|+++.++|.
T Consensus       232 ----~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          232 ----DGKGVDKVVIAGGD  245 (352)
T ss_dssp             ----TTCCEEEEEECSSC
T ss_pred             ----CCCCCCEEEECCCC
Confidence                22479999999885

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.28  E-value=0.047  Score=49.77  Aligned_cols=118  Identities=12%  Similarity=0.200  Sum_probs=73.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ..|.|+|| |.+|..++..|+..+.  +|++.++++++++....++....+ ...+.+.. |  +.+             
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~-------------   68 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYS-------------   68 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGG-------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHH-------------
Confidence            47999999 9999999999999986  899999999888877777755321 12233332 2  222             


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                          ....-|++|..+|..... ..+.   .+.+..|.-    +++.+.+.+.+....+.|+++|-....
T Consensus        69 ----a~~~aDvVii~ag~~~~~-g~~R---~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~~  126 (318)
T 1ez4_A           69 ----DCKDADLVVITAGAPQKP-GESR---LDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANPVDI  126 (318)
T ss_dssp             ----GGTTCSEEEECCCC--------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSHHH
T ss_pred             ----HhCCCCEEEECCCCCCCC-CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCcHHH
Confidence                224589999999975221 1111   223445544    344444544444446889998776544

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.25  E-value=0.0079  Score=57.29  Aligned_cols=79  Identities=15%  Similarity=0.256  Sum_probs=61.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEEe
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQV  121 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~  121 (369)
                      ++..|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+++.+++.+|..++..+..
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~  117 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  117 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEES
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEec
Confidence            5678999998 7899999999999998 89998642                   1577888888888888888988888


Q ss_pred             cCCChHHHHHHHHHHHHHHhccCCCCCccEEEecc
Q 017580          122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       122 Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nA  156 (369)
                      ++++..  .+++             ...|++|++.
T Consensus       118 ~i~~~~--~~~~-------------~~~DlVi~~~  137 (434)
T 1tt5_B          118 KIQDFN--DTFY-------------RQFHIIVCGL  137 (434)
T ss_dssp             CGGGBC--HHHH-------------TTCSEEEECC
T ss_pred             ccchhh--HHHh-------------cCCCEEEECC
Confidence            776532  1111             3479998874

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.22  E-value=0.015  Score=54.83  Aligned_cols=43  Identities=21%  Similarity=0.144  Sum_probs=38.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      ++.+++|+|+|+ |++|..+++.+...|++|++++++.++++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467899999997 8999999999999999999999999887665

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.22  E-value=0.13  Score=47.11  Aligned_cols=121  Identities=14%  Similarity=0.139  Sum_probs=70.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhh---c-CCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR---N-KDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~---~-~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ..|.|.|| |.+|..+|..|+..|. +|++.++++++++.....+...   . ...++.. .   +|.+   +   .+  
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---e---a~--   76 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYE---A---AL--   76 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHH---H---HH--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHH---H---Hh--
Confidence            46889998 9999999999999998 9999999998888755444332   1 1222222 1   2222   1   11  


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHH--hHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPE--GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~--~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                              ..-|++|..+|..... .....  .-...+..|.--...+.+.+.++    ..++.++++|-..+.
T Consensus        77 --------~~aDiVi~a~g~p~~~-g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~----~p~a~vi~~tNP~~~  137 (331)
T 1pzg_A           77 --------TGADCVIVTAGLTKVP-GKPDSEWSRNDLLPFNSKIIREIGQNIKKY----CPKTFIIVVTNPLDC  137 (331)
T ss_dssp             --------TTCSEEEECCSCSSCT-TCCGGGCCGGGGHHHHHHHHHHHHHHHHHH----CTTCEEEECCSSHHH
T ss_pred             --------CCCCEEEEccCCCCCC-CcccCCCCHHHHHHHHHHHHHHHHHHHHHH----CCCcEEEEEcCchHH
Confidence                    2479999999875221 11000  11223444544444444444433    224677776655443

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.18  E-value=0.06  Score=49.23  Aligned_cols=119  Identities=13%  Similarity=0.157  Sum_probs=74.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ...|.|+|| |.+|..++..|+..+.  +|++.++++++++....++....+ ...+.+.. |  +.+.           
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a-----------   73 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD-----------   73 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH-----------
Confidence            457999999 9999999999999886  899999999888877777654321 12233332 2  2221           


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                            ...-|++|..+|..... ..+.+   ..+..|.--...+.+.    +.+....+.|+++|-....
T Consensus        74 ------~~~aDvVii~ag~~~k~-g~~R~---dl~~~n~~i~~~i~~~----i~~~~p~a~iiv~tNPv~~  130 (326)
T 2zqz_A           74 ------AKDADLVVITAGAPQKP-GETRL---DLVNKNLKILKSIVDP----IVDSGFNGIFLVAANPVDI  130 (326)
T ss_dssp             ------GGGCSEEEECCCCC------CHH---HHHHHHHHHHHHHHHH----HHHHTCCSEEEECSSSHHH
T ss_pred             ------hCCCCEEEEcCCCCCCC-CCCHH---HHHHHHHHHHHHHHHH----HHHHCCCeEEEEeCCcHHH
Confidence                  23489999999974221 22222   3455555444444444    3333336899998776544

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.18  E-value=0.061  Score=48.83  Aligned_cols=117  Identities=20%  Similarity=0.200  Sum_probs=74.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+.|+|| |.+|..++..|+..+  .+|++.++++++++....++....+ ...+.+.. |  +.+.             
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-------------   64 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-------------   64 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-------------
Confidence            5889998 999999999999998  4899999999888877777754321 11223322 2  2221             


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                          ...-|++|..+|.... +..+.+   ..+..|.--...+    .+.+.+....+.|+++|-....
T Consensus        65 ----~~~aD~Vii~ag~~~~-~g~~r~---dl~~~n~~i~~~i----~~~i~~~~p~a~iiv~tNPv~~  121 (310)
T 2xxj_A           65 ----LEGARAVVLAAGVAQR-PGETRL---QLLDRNAQVFAQV----VPRVLEAAPEAVLLVATNPVDV  121 (310)
T ss_dssp             ----GTTEEEEEECCCCCCC-TTCCHH---HHHHHHHHHHHHH----HHHHHHHCTTCEEEECSSSHHH
T ss_pred             ----hCCCCEEEECCCCCCC-CCcCHH---HHHHhhHHHHHHH----HHHHHHHCCCcEEEEecCchHH
Confidence                2458999999997532 223333   3355555444444    4444333336889998776544

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.13  E-value=0.1  Score=47.34  Aligned_cols=116  Identities=12%  Similarity=0.131  Sum_probs=67.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhh----cCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ..|.|+|| |.+|..++..|+..|. +|++.++++++++....++...    ....++... .|.   +           
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~---~-----------   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NNY---A-----------   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CCH---H-----------
Confidence            46899999 9999999999999996 9999999998887666565442    112222221 232   2           


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                            .....|++|.++|..... ..+.   .+.+..|.--.    +.+.+.+.+....+.|+++|-...
T Consensus        67 ------a~~~aD~Vi~a~g~p~~~-g~~r---~dl~~~n~~i~----~~i~~~i~~~~p~a~vi~~tNPv~  123 (309)
T 1ur5_A           67 ------DTANSDVIVVTSGAPRKP-GMSR---EDLIKVNADIT----RACISQAAPLSPNAVIIMVNNPLD  123 (309)
T ss_dssp             ------GGTTCSEEEECCCC------------CHHHHHHHHHH----HHHHHHHGGGCTTCEEEECCSSHH
T ss_pred             ------HHCCCCEEEEcCCCCCCC-CCCH---HHHHHHHHHHH----HHHHHHHHhhCCCeEEEEcCCchH
Confidence                  123589999999974221 1111   12334444333    344444444332456666655443

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.12  E-value=0.0091  Score=55.51  Aligned_cols=47  Identities=19%  Similarity=0.257  Sum_probs=41.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      +++||+++|.|+ |.+|..+|+.|.+.|++|++.+++.+++++..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            578999999997 78999999999999999999999988777666554

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.11  E-value=0.0095  Score=59.23  Aligned_cols=82  Identities=18%  Similarity=0.284  Sum_probs=62.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc-------------------chHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++..|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            34578999998 8999999999999998 899988632                   46677788888888888999998


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nA  156 (369)
                      .+++.......+             ....|++|++.
T Consensus        94 ~~i~~~~~~~~~-------------~~~~DlVvda~  116 (640)
T 1y8q_B           94 DSIMNPDYNVEF-------------FRQFILVMNAL  116 (640)
T ss_dssp             SCTTSTTSCHHH-------------HTTCSEEEECC
T ss_pred             cccchhhhhHhh-------------hcCCCEEEECC
Confidence            888653211111             13589998874

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.04  E-value=0.097  Score=44.17  Aligned_cols=77  Identities=12%  Similarity=0.099  Sum_probs=56.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+.+|+-.|++.|.   ++..+++.+.+|+.++.+++.++.+.+.++..+...++.++..|+.+.-          .   
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~---  118 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------A---  118 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------T---
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------c---
Confidence            36789999998753   4455555689999999999998888887766543447999999987521          0   


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         .....|+++.+.+
T Consensus       119 ---~~~~~D~v~~~~~  131 (204)
T 3njr_A          119 ---DLPLPEAVFIGGG  131 (204)
T ss_dssp             ---TSCCCSEEEECSC
T ss_pred             ---cCCCCCEEEECCc
Confidence               2246899997764

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.99  E-value=0.036  Score=48.47  Aligned_cols=77  Identities=16%  Similarity=0.180  Sum_probs=57.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      .|.|.|++|.+|+.+++.+.+. |++|+.+....+.++++..    .  +.   =+.+|++.++.+.+.+....+     
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~--~~---DvvIDfT~p~a~~~~~~~a~~-----   67 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----G--NT---EVVIDFTHPDVVMGNLEFLID-----   67 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----T--TC---CEEEECSCTTTHHHHHHHHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----c--CC---cEEEEccChHHHHHHHHHHHH-----
Confidence            4899999999999999999876 8898866544444443321    1  12   267899999999888887776     


Q ss_pred             CCCCCccEEEecccc
Q 017580          144 DMHSSIQLLINNAGI  158 (369)
Q Consensus       144 ~~~~~id~lv~nAG~  158 (369)
                         .++++++...|.
T Consensus        68 ---~g~~~VigTTG~   79 (245)
T 1p9l_A           68 ---NGIHAVVGTTGF   79 (245)
T ss_dssp             ---TTCEEEECCCCC
T ss_pred             ---cCCCEEEcCCCC
Confidence               468889877774

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.98  E-value=0.11  Score=47.58  Aligned_cols=116  Identities=12%  Similarity=0.106  Sum_probs=68.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhc----CCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +.|.|.|| |.+|..+|..|+..|. +|++.++++++++.....+....    ...++... .|.   +.          
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~a----------   79 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY---EY----------   79 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---GG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH---HH----------
Confidence            57889998 9999999999999998 99999999988876544443321    12233321 232   21          


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                             ...-|++|.++|+.... ..+..   +.+..|.--...+.+.+.++    ..++.++++|-...
T Consensus        80 -------l~~aD~VI~avg~p~k~-g~tr~---dl~~~n~~i~~~i~~~i~~~----~p~a~viv~tNP~~  135 (328)
T 2hjr_A           80 -------LQNSDVVIITAGVPRKP-NMTRS---DLLTVNAKIVGSVAENVGKY----CPNAFVICITNPLD  135 (328)
T ss_dssp             -------GTTCSEEEECCSCCCCT-TCCSG---GGHHHHHHHHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             -------HCCCCEEEEcCCCCCCC-CCchh---hHHhhhHHHHHHHHHHHHHH----CCCeEEEEecCchH
Confidence                   23589999999874321 22211   22333433333333333333    22467777765443

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.98  E-value=0.017  Score=53.19  Aligned_cols=103  Identities=16%  Similarity=0.164  Sum_probs=64.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++++|+|+ |++|...+..+... |++|+++++++++.+.+. ++     +... +  .|-.+ + .   .+++++..
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~l-----Ga~~-~--i~~~~-~-~---~~~v~~~t  235 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EV-----GADA-A--VKSGA-G-A---ADAIRELT  235 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HT-----TCSE-E--EECST-T-H---HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc-----CCCE-E--EcCCC-c-H---HHHHHHHh
Confidence            3789999998 99999888777666 689999999988766543 22     2221 1  23222 2 2   23333322


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                          ...++|+++.++|..        +               ..+..+..++.   .|+++.++...+
T Consensus       236 ----~g~g~d~v~d~~G~~--------~---------------~~~~~~~~l~~---~G~iv~~G~~~~  274 (345)
T 3jv7_A          236 ----GGQGATAVFDFVGAQ--------S---------------TIDTAQQVVAV---DGHISVVGIHAG  274 (345)
T ss_dssp             ----GGGCEEEEEESSCCH--------H---------------HHHHHHHHEEE---EEEEEECSCCTT
T ss_pred             ----CCCCCeEEEECCCCH--------H---------------HHHHHHHHHhc---CCEEEEECCCCC
Confidence                124799999999852        1               22334444443   489999987554

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.98  E-value=0.0065  Score=56.39  Aligned_cols=38  Identities=21%  Similarity=0.211  Sum_probs=32.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   99 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~   99 (369)
                      .|++|+|+||+|++|...+.-....|++++.++++.++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            37899999999999999988877789998888766543

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.96  E-value=0.01  Score=54.88  Aligned_cols=64  Identities=16%  Similarity=0.257  Sum_probs=52.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++..|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+.
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            45678999997 6999999999999998 89998532                   357888888998888888888888


Q ss_pred             ecCCC
Q 017580          121 VDLSS  125 (369)
Q Consensus       121 ~Dls~  125 (369)
                      .++++
T Consensus       113 ~~~~~  117 (346)
T 1y8q_A          113 EDIEK  117 (346)
T ss_dssp             SCGGG
T ss_pred             cccCc
Confidence            77654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.96  E-value=0.006  Score=55.93  Aligned_cols=40  Identities=30%  Similarity=0.423  Sum_probs=35.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      +|+|+||+||+|...+..+...|++|+++++++++.+.+.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  192 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK  192 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            7999999999999999998889999999999988776553

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.94  E-value=0.14  Score=46.60  Aligned_cols=120  Identities=13%  Similarity=0.129  Sum_probs=71.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhh----cCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +.|.|.|| |.+|..++..|+..|. +|++.++++++++.....+...    ....++... .|.   +           
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-----------   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY---D-----------   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH---H-----------
Confidence            46889998 9999999999999998 9999999999888766665442    112222221 232   1           


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCC-HH-hHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLT-PE-GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~-~~-~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                            ....-|++|..+|+.... ..+ .+ .-.+.+..|.--...+.+.+.+.    ...+.++++|.....
T Consensus        69 ------al~~aD~Vi~a~g~p~k~-g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~----~p~a~iiv~tNP~~~  131 (322)
T 1t2d_A           69 ------DLAGADVVIVTAGFTKAP-GKSDKEWNRDDLLPLNNKIMIEIGGHIKKN----CPNAFIIVVTNPVDV  131 (322)
T ss_dssp             ------GGTTCSEEEECCSCSSCT-TCCSTTCCGGGGHHHHHHHHHHHHHHHHHH----CTTSEEEECSSSHHH
T ss_pred             ------HhCCCCEEEEeCCCCCCC-CCCcccccHHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEecCChHH
Confidence                  123589999999974221 111 00 01223444444333344444333    225777777665443

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.93  E-value=0.11  Score=47.08  Aligned_cols=115  Identities=20%  Similarity=0.246  Sum_probs=72.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhh----cCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      |.|+|| |.+|..++..++..|. +|++.++++++++....++...    ....++... .|   .+             
T Consensus         2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~-------------   63 (308)
T 2d4a_B            2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NS---YE-------------   63 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG-------------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CC---HH-------------
Confidence            778998 9999999999999888 7999999998887766666542    112233321 23   22             


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                          .....|++|..+|..... ..+.+   ..+..|.-    +.+.+.+.+.+....+.|+++|-....
T Consensus        64 ----a~~~aD~Vi~~ag~~~k~-G~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~~  121 (308)
T 2d4a_B           64 ----DMRGSDIVLVTAGIGRKP-GMTRE---QLLEANAN----TMADLAEKIKAYAKDAIVVITTNPVDA  121 (308)
T ss_dssp             ----GGTTCSEEEECCSCCCCS-SCCTH---HHHHHHHH----HHHHHHHHHHHHCTTCEEEECCSSHHH
T ss_pred             ----HhCCCCEEEEeCCCCCCC-CCcHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEeCCchHH
Confidence                124589999999975322 22322   23444443    344444444432235788888765543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.87  E-value=0.012  Score=53.58  Aligned_cols=41  Identities=20%  Similarity=0.244  Sum_probs=35.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      .|++|+|+|| |++|...+......|++|+.++ ++++.+.+.
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~  182 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA  182 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH
Confidence            4889999999 9999999988888899999999 777766553

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.84  E-value=0.075  Score=48.42  Aligned_cols=118  Identities=15%  Similarity=0.139  Sum_probs=70.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ..|.|+|+ |.+|..++..|+..|.  +|++.+.++++++....++....+ ...+.+..   .+.+             
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~~~-------------   70 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDYS-------------   70 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CCHH-------------
Confidence            45888898 9999999999999997  899999998877766666644321 11222221   1222             


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                          ....-|++|..+|.... +..+.   .+.+..|.--...+++.+.++   .+ ++.|+++|.....
T Consensus        71 ----a~~~aDvVii~~g~p~k-~g~~r---~dl~~~n~~i~~~i~~~i~~~---~p-~a~viv~tNPv~~  128 (318)
T 1y6j_A           71 ----DVKDCDVIVVTAGANRK-PGETR---LDLAKKNVMIAKEVTQNIMKY---YN-HGVILVVSNPVDI  128 (318)
T ss_dssp             ----GGTTCSEEEECCCC-------CH---HHHHHHHHHHHHHHHHHHHHH---CC-SCEEEECSSSHHH
T ss_pred             ----HhCCCCEEEEcCCCCCC-CCcCH---HHHHHhhHHHHHHHHHHHHHh---CC-CcEEEEecCcHHH
Confidence                12458999999997421 12222   234666666555555555544   22 5788887665443

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.82  E-value=0.015  Score=55.05  Aligned_cols=40  Identities=15%  Similarity=0.256  Sum_probs=35.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      ..|+|.|+ |-+|..+++.|.+.|..|++++++++..+.+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~   44 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR   44 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            46899997 77999999999999999999999998776654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.81  E-value=0.091  Score=47.69  Aligned_cols=118  Identities=14%  Similarity=0.104  Sum_probs=73.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-C--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEe-cCCChHHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSRE-G--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQV-DLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~-G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~-Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.|+||+|.+|..++..|+.+ +  .+|+++++++ +.+....++...  ...+.+... .-.+.+             
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~~~~v~~~~~~~~~~-------------   65 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PTAVKIKGFSGEDATP-------------   65 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CSSEEEEEECSSCCHH-------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CCCceEEEecCCCcHH-------------
Confidence            4789999999999999999886 5  3899999987 455555556543  222222221 101121             


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                          .....|++|..||.... +.++   -.+.++.|.--...+.+.+..+    ...+.|+++|.....
T Consensus        66 ----~~~~aDivii~ag~~rk-pG~~---R~dll~~N~~I~~~i~~~i~~~----~p~a~vlvvtNPvd~  123 (312)
T 3hhp_A           66 ----ALEGADVVLISAGVARK-PGMD---RSDLFNVNAGIVKNLVQQVAKT----CPKACIGIITNPVNT  123 (312)
T ss_dssp             ----HHTTCSEEEECCSCSCC-TTCC---HHHHHHHHHHHHHHHHHHHHHH----CTTSEEEECSSCHHH
T ss_pred             ----HhCCCCEEEEeCCCCCC-CCCC---HHHHHHHHHHHHHHHHHHHHHH----CCCcEEEEecCcchh
Confidence                12458999999997421 2233   2445677765555555555443    225788888875543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.75  E-value=0.014  Score=52.06  Aligned_cols=39  Identities=18%  Similarity=0.246  Sum_probs=35.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      +++||.++|.|+++-+|+.+|..|+.+|++|.++.|+..
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~  195 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK  195 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch
Confidence            578999999999999999999999999999998877543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.75  E-value=0.0091  Score=54.90  Aligned_cols=72  Identities=11%  Similarity=0.027  Sum_probs=55.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .+.++|.|+ |.+|..++++|.++|. |++++++++..+ +.+        ..+.++..|.++++.++++          
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a----------  173 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA----------  173 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT----------
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc----------
Confidence            467999997 8999999999999999 999999988766 331        2467899999998866542          


Q ss_pred             cCCCCCccEEEeccc
Q 017580          143 SDMHSSIQLLINNAG  157 (369)
Q Consensus       143 ~~~~~~id~lv~nAG  157 (369)
                        ...+.|.+|...+
T Consensus       174 --~i~~a~~vi~~~~  186 (336)
T 1lnq_A          174 --NVRGARAVIVDLE  186 (336)
T ss_dssp             --CSTTEEEEEECCS
T ss_pred             --ChhhccEEEEcCC
Confidence              2345788886653

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.71  E-value=0.038  Score=50.37  Aligned_cols=42  Identities=14%  Similarity=0.197  Sum_probs=35.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      +.+++.|.|+ |.+|..+|+.|++.|++|++.+|++++.+++.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~   71 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLA   71 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            4557777766 88999999999999999999999988776654

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.68  E-value=0.11  Score=47.00  Aligned_cols=116  Identities=18%  Similarity=0.168  Sum_probs=66.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+.|.|| |.+|..++..|+..|.  +|+++++++++++....++....+ .....+..   .+.+.             
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~a-------------   64 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHSE-------------   64 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGGG-------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHHH-------------
Confidence            5789998 9999999999999998  999999998877665555533211 01122221   12221             


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                          ....|++|.++|..... ..+   -.+.+..|.--.-.+++.+.++   .+ ++.|+++|-...
T Consensus        65 ----~~~aDvVIi~~~~~~~~-g~~---r~dl~~~n~~i~~~i~~~i~~~---~p-~~~vi~~tNP~~  120 (304)
T 2v6b_A           65 ----LADAQVVILTAGANQKP-GES---RLDLLEKNADIFRELVPQITRA---AP-DAVLLVTSNPVD  120 (304)
T ss_dssp             ----GTTCSEEEECC----------------CHHHHHHHHHHHHHHHHHH---CS-SSEEEECSSSHH
T ss_pred             ----hCCCCEEEEcCCCCCCC-CCc---HHHHHHhHHHHHHHHHHHHHHh---CC-CeEEEEecCchH
Confidence                23589999999864211 111   1234555655555555555544   12 467777665443

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.64  E-value=0.15  Score=46.32  Aligned_cols=117  Identities=15%  Similarity=0.130  Sum_probs=68.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhh----cCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +.+.|.|+ |.+|..+|..|+..|. +|++.++++++++....++...    ....++... .|.   +.          
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~---~a----------   69 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DDY---AD----------   69 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---GG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CCH---HH----------
Confidence            57889998 8999999999999998 9999999998877643333221    012222211 222   11          


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                             ....|++|.++|..... ..+.++   .+.-|.--.-.+++.+.++    ..++.++++|.....
T Consensus        70 -------~~~aDiVi~avg~p~~~-g~~r~d---~~~~~~~i~~~i~~~i~~~----~~~~iii~~sNp~~~  126 (317)
T 2ewd_A           70 -------ISGSDVVIITASIPGRP-KDDRSE---LLFGNARILDSVAEGVKKY----CPNAFVICITNPLDV  126 (317)
T ss_dssp             -------GTTCSEEEECCCCSSCC-SSCGGG---GHHHHHHHHHHHHHHHHHH----CTTSEEEECCSSHHH
T ss_pred             -------hCCCCEEEEeCCCCCCC-CCcHHH---HHHhhHHHHHHHHHHHHHH----CCCcEEEEeCChHHH
Confidence                   13489999999975322 223222   2333333333344444443    224677777765543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.63  E-value=0.046  Score=50.91  Aligned_cols=45  Identities=16%  Similarity=0.130  Sum_probs=39.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA  105 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~  105 (369)
                      .+.+++|+|.|+ |.+|..+++.+...|++|++.+|+.++++.+.+
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            457889999999 799999999999999999999999988776643

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=95.61  E-value=0.048  Score=50.88  Aligned_cols=74  Identities=11%  Similarity=0.253  Sum_probs=54.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++||+||-.|+++||   ++...|+.|+ +|+++..++ -++.+.+.++..+...++.++..|+.+.+            
T Consensus        82 ~~~k~VLDvG~GtGi---Ls~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~------------  145 (376)
T 4hc4_A           82 LRGKTVLDVGAGTGI---LSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE------------  145 (376)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC------------
T ss_pred             cCCCEEEEeCCCccH---HHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec------------
Confidence            468999999999986   3455577897 799999874 45555555555555678999999987753            


Q ss_pred             HhccCCCCCccEEEec
Q 017580          140 LLDSDMHSSIQLLINN  155 (369)
Q Consensus       140 ~~~~~~~~~id~lv~n  155 (369)
                           ...++|++|..
T Consensus       146 -----lpe~~DvivsE  156 (376)
T 4hc4_A          146 -----LPEQVDAIVSE  156 (376)
T ss_dssp             -----CSSCEEEEECC
T ss_pred             -----CCccccEEEee
Confidence                 23579999964

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.49  E-value=0.03  Score=53.91  Aligned_cols=73  Identities=18%  Similarity=0.189  Sum_probs=57.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      .++|.|+ |-+|..+|+.|.++|++|++++++++.++.+.+++       .+.++..|-++++.++++            
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A------------   64 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA------------   64 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH------------
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc------------
Confidence            5888888 57999999999999999999999998877765443       467888999998876654            


Q ss_pred             CCCCccEEEeccc
Q 017580          145 MHSSIQLLINNAG  157 (369)
Q Consensus       145 ~~~~id~lv~nAG  157 (369)
                      .-..-|++|...+
T Consensus        65 gi~~ad~~ia~t~   77 (461)
T 4g65_A           65 GAQDADMLVAVTN   77 (461)
T ss_dssp             TTTTCSEEEECCS
T ss_pred             CCCcCCEEEEEcC
Confidence            2245777876554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.46  E-value=0.023  Score=51.31  Aligned_cols=42  Identities=26%  Similarity=0.247  Sum_probs=37.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE  102 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~  102 (369)
                      ++.|++++|.|+ |+||+++|+.+...|++|++.+|+.++.+.
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            578999999997 899999999999999999999999865544

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.43  E-value=0.3  Score=44.12  Aligned_cols=115  Identities=17%  Similarity=0.209  Sum_probs=71.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHhh----cCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~--G~~Vvl~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+.|.|+ |.+|..+|..|+..  |.+|+++++++++++....++...    ....++.. ..|   .+.          
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d---~~~----------   66 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-SND---YAD----------   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ESC---GGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-CCC---HHH----------
Confidence            4788998 99999999999996  689999999998887655444321    11122221 122   221          


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  209 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~  209 (369)
                             ....|++|.++|.... +..+   -.+.+..|.--...+.+.+.++.    .++.|+++|...+
T Consensus        67 -------l~~aDvViiav~~p~~-~g~~---r~dl~~~n~~i~~~i~~~i~~~~----~~~~viv~tNP~~  122 (310)
T 1guz_A           67 -------TANSDIVIITAGLPRK-PGMT---REDLLMKNAGIVKEVTDNIMKHS----KNPIIIVVSNPLD  122 (310)
T ss_dssp             -------GTTCSEEEECCSCCCC-TTCC---HHHHHHHHHHHHHHHHHHHHHHC----SSCEEEECCSSHH
T ss_pred             -------HCCCCEEEEeCCCCCC-CCCC---HHHHHHHHHHHHHHHHHHHHHhC----CCcEEEEEcCchH
Confidence                   1348999999985321 1111   23456666666556666665552    2578888866544

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.41  E-value=0.13  Score=46.91  Aligned_cols=115  Identities=18%  Similarity=0.223  Sum_probs=69.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhc---CCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN---KDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~---~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+.|.|+ |.+|..++..|+..|.  +|++.++++++++.....+....   ...++.  .   ++.+.           
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~--~---~d~~~-----------   64 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY--A---GDYAD-----------   64 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE--E---CCGGG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE--e---CCHHH-----------
Confidence            4788998 9999999999999998  99999999888777665543321   112222  1   23221           


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                            ....|++|.+++..... ..+.   .+.+..|.--...+++.+.++.   + ++.||++|...+.
T Consensus        65 ------~~~aDvViiav~~~~~~-g~~r---~dl~~~n~~i~~~i~~~i~~~~---~-~~~ii~~tNp~~~  121 (319)
T 1a5z_A           65 ------LKGSDVVIVAAGVPQKP-GETR---LQLLGRNARVMKEIARNVSKYA---P-DSIVIVVTNPVDV  121 (319)
T ss_dssp             ------GTTCSEEEECCCCCCCS-SCCH---HHHHHHHHHHHHHHHHHHHHHC---T-TCEEEECSSSHHH
T ss_pred             ------hCCCCEEEEccCCCCCC-CCCH---HHHHHHHHHHHHHHHHHHHhhC---C-CeEEEEeCCcHHH
Confidence                  13489999999864321 1121   1234445444444444444431   2 4677777665543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.41  E-value=0.0096  Score=53.20  Aligned_cols=44  Identities=32%  Similarity=0.417  Sum_probs=37.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      ++++++++|.|+ |++|+++++.|++.|++|++++|+.++.+++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            356889999997 79999999999999999999999987665543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.28  E-value=0.022  Score=50.33  Aligned_cols=46  Identities=28%  Similarity=0.420  Sum_probs=39.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      +++| +++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.+++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            4668 8999997 77999999999999999999999988777666554

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.25  E-value=0.036  Score=49.04  Aligned_cols=36  Identities=8%  Similarity=0.168  Sum_probs=33.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   96 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~   96 (369)
                      ++||.++|.|+++-+|+.+|+.|+.+|++|+++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            579999999999999999999999999999988764

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.21  E-value=0.051  Score=49.92  Aligned_cols=79  Identities=22%  Similarity=0.238  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+|| ||+|...+..+...|++ ++.+++++++++.++ ++     +...   ..|.++.+ ..+..+++.   
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~l-----Ga~~---~i~~~~~~-~~~~~~~~~---  225 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SF-----GAMQ---TFNSSEMS-APQMQSVLR---  225 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCSE---EEETTTSC-HHHHHHHHG---
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-Hc-----CCeE---EEeCCCCC-HHHHHHhhc---
Confidence            4789999998 89999999988889985 567888877655432 22     3221   23444433 222333332   


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          .....|+++.++|.
T Consensus       226 ----~~~g~d~v~d~~G~  239 (346)
T 4a2c_A          226 ----ELRFNQLILETAGV  239 (346)
T ss_dssp             ----GGCSSEEEEECSCS
T ss_pred             ----ccCCcccccccccc
Confidence                23668999998884

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.15  E-value=0.033  Score=50.09  Aligned_cols=42  Identities=26%  Similarity=0.304  Sum_probs=37.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE  102 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~  102 (369)
                      ++.|++++|.|+ |+||+++|+.+...|++|++.+|+.++.+.
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            578999999995 899999999999999999999999865443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.12  E-value=0.068  Score=47.70  Aligned_cols=84  Identities=14%  Similarity=0.130  Sum_probs=58.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC---EEEEEeCCcchHHHHHHHH--------HhhcCCCcEEEEEecCCChHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF---HVVLVGRSSHLLSETMADI--------TSRNKDARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~---~Vvl~~r~~~~~~~~~~~~--------~~~~~~~~v~~~~~Dls~~~~i~~~  132 (369)
                      +++.|.|+ |.+|.++++.|++.|+   +|++++|++++++.+.++.        .+.-.+..+.++.+   .++.++++
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v   79 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV   79 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence            45777787 8899999999999998   8999999998887776542        11112344555544   45778888


Q ss_pred             HHHHHHH-HhccCCCCCccEEEeccc
Q 017580          133 KDSLQQW-LLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       133 ~~~i~~~-~~~~~~~~~id~lv~nAG  157 (369)
                      ++++... +.      +=.++|++++
T Consensus        80 l~~l~~~~l~------~~~iiiS~~a   99 (280)
T 3tri_A           80 CEELKDILSE------TKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHT------TTCEEEECCT
T ss_pred             HHHHHhhccC------CCeEEEEecC
Confidence            8888764 31      1126776654

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.11  E-value=0.068  Score=49.06  Aligned_cols=79  Identities=20%  Similarity=0.167  Sum_probs=49.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++++|+|| ||+|...+..+... |++|+++++++++++.+. ++     +...   ..|-++.+..+    ++.+..
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~-----Ga~~---~i~~~~~~~~~----~v~~~t  228 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KI-----GADV---TINSGDVNPVD----EIKKIT  228 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HT-----TCSE---EEEC-CCCHHH----HHHHHT
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hc-----CCeE---EEeCCCCCHHH----Hhhhhc
Confidence            3789999998 77887777777765 679999999987754432 21     2221   23555544332    333321


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ....+|.++.++|.
T Consensus       229 ----~g~g~d~~~~~~~~  242 (348)
T 4eez_A          229 ----GGLGVQSAIVCAVA  242 (348)
T ss_dssp             ----TSSCEEEEEECCSC
T ss_pred             ----CCCCceEEEEeccC
Confidence                23468888888764

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.10  E-value=0.036  Score=49.32  Aligned_cols=38  Identities=24%  Similarity=0.263  Sum_probs=34.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      +++||.++|.|+++-+|+.+|..|+.+|++|.++.+..
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            57899999999998899999999999999999887643

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=95.10  E-value=0.15  Score=44.58  Aligned_cols=80  Identities=14%  Similarity=0.161  Sum_probs=58.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++||=.|+++|.   ++..+++++. +|++++.++..++.+.+.+.......++.++..|+.+...      .    + 
T Consensus        50 ~~~vLDlG~G~G~---~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~------~----~-  115 (259)
T 3lpm_A           50 KGKIIDLCSGNGI---IPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD------L----I-  115 (259)
T ss_dssp             CCEEEETTCTTTH---HHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG------T----S-
T ss_pred             CCEEEEcCCchhH---HHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh------h----h-
Confidence            6788888888663   4445566665 9999999999988888888766555679999999976431      0    0 


Q ss_pred             ccCCCCCccEEEeccccc
Q 017580          142 DSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~  159 (369)
                         ..+..|+++.|....
T Consensus       116 ---~~~~fD~Ii~npPy~  130 (259)
T 3lpm_A          116 ---PKERADIVTCNPPYF  130 (259)
T ss_dssp             ---CTTCEEEEEECCCC-
T ss_pred             ---ccCCccEEEECCCCC
Confidence               236799999997653

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=94.98  E-value=0.045  Score=49.05  Aligned_cols=38  Identities=24%  Similarity=0.301  Sum_probs=34.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      +++||.++|.|+++-+|+.+|+.|+++|++|.++.|..
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            57899999999999899999999999999999988743

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=94.97  E-value=0.0093  Score=56.26  Aligned_cols=35  Identities=29%  Similarity=0.440  Sum_probs=31.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEE-EEeC
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVV-LVGR   95 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vv-l~~r   95 (369)
                      +++|++++|+| .|.+|..+|+.|.+.|++|+ +.++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            57899999999 78899999999999999998 6666

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.95  E-value=0.036  Score=49.31  Aligned_cols=37  Identities=19%  Similarity=0.187  Sum_probs=33.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   96 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~   96 (369)
                      +++||.++|.|+++-+|+.+|+.|..+|++|.++.|+
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            5789999999999989999999999999999888764

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=94.94  E-value=0.021  Score=50.33  Aligned_cols=41  Identities=29%  Similarity=0.430  Sum_probs=35.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSET  103 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~  103 (369)
                      ++| +++|.|+ ||.|++++..|++.|+ +|++++|+.++++++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            467 8999997 8999999999999998 899999998765544

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.93  E-value=0.19  Score=45.10  Aligned_cols=41  Identities=27%  Similarity=0.384  Sum_probs=35.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA  105 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~  105 (369)
                      ++|.|.|+ |.+|..+|..|++.|++|++++|++++++...+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            46888888 889999999999999999999999888776543

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=94.84  E-value=0.23  Score=40.71  Aligned_cols=78  Identities=14%  Similarity=0.113  Sum_probs=55.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +.+||=.|++.|.   ++..|++++.+|+.++.+++.++.+.+.+...+- .++.++..|..+....             
T Consensus        23 ~~~vLDiGcG~G~---~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~-------------   85 (185)
T 3mti_A           23 ESIVVDATMGNGN---DTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHY-------------   85 (185)
T ss_dssp             TCEEEESCCTTSH---HHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGT-------------
T ss_pred             CCEEEEEcCCCCH---HHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhh-------------
Confidence            6789999988763   4455666689999999999999888888776543 5678877555432210             


Q ss_pred             cCCCCCccEEEeccccc
Q 017580          143 SDMHSSIQLLINNAGIL  159 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~  159 (369)
                        ..++.|+++.|.+..
T Consensus        86 --~~~~fD~v~~~~~~~  100 (185)
T 3mti_A           86 --VREPIRAAIFNLGYL  100 (185)
T ss_dssp             --CCSCEEEEEEEEC--
T ss_pred             --ccCCcCEEEEeCCCC
Confidence              235799999887654

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=94.83  E-value=0.22  Score=41.25  Aligned_cols=81  Identities=15%  Similarity=0.128  Sum_probs=56.9

Q ss_pred             CCEEEEeCCCCc-hHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~g-IG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +.+||-.|+++| +...+++.+. .+.+|+.++.+++.++.+.+.+...+...++.++..|+.+....            
T Consensus        23 ~~~vLDlGcG~G~~~~~l~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------   89 (197)
T 3eey_A           23 GDTVVDATCGNGNDTAFLASLVG-ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY------------   89 (197)
T ss_dssp             TCEEEESCCTTSHHHHHHHHHHC-TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT------------
T ss_pred             CCEEEEcCCCCCHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh------------
Confidence            578998888865 3344444331 23599999999998888888877654345799999998654320            


Q ss_pred             ccCCCCCccEEEeccccc
Q 017580          142 DSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~  159 (369)
                         ..+..|+++.|.+..
T Consensus        90 ---~~~~fD~v~~~~~~~  104 (197)
T 3eey_A           90 ---IDCPVKAVMFNLGYL  104 (197)
T ss_dssp             ---CCSCEEEEEEEESBC
T ss_pred             ---ccCCceEEEEcCCcc
Confidence               235799999998763

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=94.72  E-value=0.14  Score=49.20  Aligned_cols=44  Identities=18%  Similarity=0.123  Sum_probs=36.4

Q ss_pred             CEEEEeCCCC-chHHHHHHHHHHC----CCEEEEEeCCcchHHHHHHHH
Q 017580           64 PVCIVTGATS-GLGAAAAYALSRE----GFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        64 k~vlITGas~-gIG~~~a~~La~~----G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ..|.|.||++ |.|.++|..|+..    |.+|++.++++++++.+....
T Consensus         4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~   52 (480)
T 1obb_A            4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIA   52 (480)
T ss_dssp             CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHH
Confidence            4688999999 8999999988864    789999999998877755443

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=94.71  E-value=0.085  Score=48.58  Aligned_cols=76  Identities=13%  Similarity=0.103  Sum_probs=46.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|++|+|+||+|++|...+......| .+|+.++ +.++.+.+.  +     +.. .+  .| .+.+ ..   +++++. 
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~-----ga~-~~--~~-~~~~-~~---~~~~~~-  204 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--D-----SVT-HL--FD-RNAD-YV---QEVKRI-  204 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--G-----GSS-EE--EE-TTSC-HH---HHHHHH-
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--c-----CCc-EE--Ec-CCcc-HH---HHHHHh-
Confidence            47899999999999998887666665 6888887 444443322  1     222 12  23 3322 22   223221 


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+++|+++.++|.
T Consensus       205 ----~~~g~Dvv~d~~g~  218 (349)
T 4a27_A          205 ----SAEGVDIVLDCLCG  218 (349)
T ss_dssp             ----CTTCEEEEEEECC-
T ss_pred             ----cCCCceEEEECCCc
Confidence                23579999999984

>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1

Probab=94.70  E-value=0.068  Score=55.18  Aligned_cols=79  Identities=15%  Similarity=0.256  Sum_probs=61.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------cchHHHHHHHHHhhcCCCcEEEEEe
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQV  121 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~  121 (369)
                      ++.+|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..+++.+..
T Consensus       410 ~~~~vlvvG~-GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np~~~v~~~~~  488 (805)
T 2nvu_B          410 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  488 (805)
T ss_dssp             HTCCEEEECC-SSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCEEEEEES
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            5678999987 5799999999999998 89998863                   2467778888888888889998888


Q ss_pred             cCCChHHHHHHHHHHHHHHhccCCCCCccEEEecc
Q 017580          122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       122 Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nA  156 (369)
                      ++++..  .++++             ..|++|.+.
T Consensus       489 ~~~~~~--~~~~~-------------~~d~vv~~~  508 (805)
T 2nvu_B          489 KIQDFN--DTFYR-------------QFHIIVCGL  508 (805)
T ss_dssp             CGGGSC--HHHHH-------------TCSEEEECC
T ss_pred             cccccH--HHHHh-------------cCCEEEECC
Confidence            887532  12221             379998774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	369
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-33
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-31
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	9e-30
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-29
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-26
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-26
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	5e-26
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-26
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-24
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	6e-24
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	6e-24
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	8e-24
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-23
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-23
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	7e-23
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	8e-23
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-22
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-22
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	6e-22
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-21
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-21
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	6e-21
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-20
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-20
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-20
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	6e-20
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	7e-20
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	8e-20
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-19
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-19
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-18
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-17
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-17
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-17
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-17
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-17
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	9e-17
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-16
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-16
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-16
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-16
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	7e-16
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-15
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-15
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	4e-15
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	9e-15
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-14
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-14
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-14
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	6e-14
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-13
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-13
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-13
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	7e-12
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-11
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-11
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	5e-11
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-11
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-10
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-09
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	8e-09
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	6e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	3e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	3e-07
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-06
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-06
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-06
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	4e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.001
d2voua1	265	c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr	0.004

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 4e-33
 Identities = 62/291 (21%), Positives = 105/291 (36%), Gaps = 49/291 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V +VTG   G+G A    L R     VVL  R        +  + +     R    Q+D+
Sbjct: 5   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR--FHQLDI 62

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 181
              QS+   +D L++       +  + +L+NNAGI    +         +  M TN+ G 
Sbjct: 63  DDLQSIRALRDFLRKE------YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGT 116

Query: 182 FFLTKLLLPLLKNS---PVPSRIVNVTSFTHRNVFNAQ---------------VNNETIT 223
             +   LLPL+K        S I++V +    +    Q               +N     
Sbjct: 117 RDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176

Query: 224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMRE 282
            K  +  K    +  Y  +K+ + + S    R L    K   + + A  PG V+T++   
Sbjct: 177 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 236

Query: 283 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV---YFFGGK 330
                              +SPE+G  + +  AL PP+  G    +    +
Sbjct: 237 KA----------------TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR 271

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 2e-31
 Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 28/223 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +VTGA+ G+GAA A AL ++G  VV   R+   + E  A+  S      L  ++ DLS
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
           + + +L    +++        HS + + INNAG+    +    +  G+  M + N +   
Sbjct: 72  NEEDILSMFSAIRSQ------HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALS 125

Query: 183 FLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
             T+     +K   V    I+N+ S +   V    V +     K+ + +      +    
Sbjct: 126 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELRE 185

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           ++                    H+      PGVV+T    ++ 
Sbjct: 186 AQ-------------------THIRATCISPGVVETQFAFKLH 209

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  112 bits (281), Expect = 9e-30
 Identities = 53/266 (19%), Positives = 97/266 (36%), Gaps = 37/266 (13%)

Query: 67  IVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           +VTGA  G+G      L ++    H++   R     +E  +      KD+R+    + ++
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-----KDSRVHVLPLTVT 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 181
             +S+    D+    + +      + LLINNAG+L +             + +  N    
Sbjct: 62  CDKSL----DTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
             LT+ LLPLLKN+       +  S +   V        +IT               Y  
Sbjct: 118 VLLTQKLLPLLKNAA-SKESGDQLSVSRAAVITISSGLGSITDNT--SGSAQFPVLAYRM 174

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL 301
           SK  + +F   L  +L      +V V+   PG V+TN+  +  +                
Sbjct: 175 SKAAINMFGRTLAVDLK---DDNVLVVNFCPGWVQTNLGGKNAAL--------------- 216

Query: 302 QSPEKGINSVLDAALAP-PETSGVYF 326
            + E+    ++ +        +G +F
Sbjct: 217 -TVEQSTAELISSFNKLDNSHNGRFF 241

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 5e-29
 Identities = 50/258 (19%), Positives = 87/258 (33%), Gaps = 42/258 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + ++TGA  G+G   AY  ++    +VL   + H L ET A    +   A++  F VD S
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC--KGLGAKVHTFVVDCS 66

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGAF 182
           + + +      ++  + D  +      L+NNA     +          ++    N +  F
Sbjct: 67  NREDIYSSAKKVKAEIGDVSI------LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 120

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
           + TK  LP +  +     IV V S          +                     Y  S
Sbjct: 121 WTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLA--------------------YCSS 159

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 302
           K   + F   L   L   +   V      P  V T  ++   +            LG   
Sbjct: 160 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTS-----------LGPTL 208

Query: 303 SPEKGINSVLDAALAPPE 320
            PE+ +N ++   L   +
Sbjct: 209 EPEEVVNRLMHGILTEQK 226

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  103 bits (258), Expect = 3e-26
 Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 37/226 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDL 123
           V I+TG+++G+G A A   +REG  V + GR +  L ET   I +    +  + +   D+
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 66

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMMSTN 177
           ++     +   +             + +L+NNAG         T +  + E YD  ++ N
Sbjct: 67  TTDAGQDEILSTTLGK------FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 120

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
                 LTK  +P L ++      ++  +                           P   
Sbjct: 121 LRSVIALTKKAVPHLSSTKGEIVNISSIASGLH---------------------ATPDFP 159

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
            Y  +K  +  ++     +L       + V +  PG+V T     +
Sbjct: 160 YYSIAKAAIDQYTRNTAIDLI---QHGIRVNSISPGLVATGFGSAM 202

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  103 bits (257), Expect = 4e-26
 Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 32/243 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TG T G+G A A     EG  V++ GR S +  +    +       +++ FQ D S
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---GTPDQIQFFQHDSS 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAF 182
                 K  D+ +           +  L+NNAGI         T   + ++++ N  G F
Sbjct: 65  DEDGWTKLFDATE------KAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF 118

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
           F T+L +  +KN  + + I+N++S                           P    Y  S
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGD--------------------PSLGAYNAS 158

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 302
           K  + I S     +  L K   V V    PG +KT ++ ++P     M+      +G + 
Sbjct: 159 KGAVRIMSKSAALDCAL-KDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIG 217

Query: 303 SPE 305
            P 
Sbjct: 218 EPN 220

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 5e-26
 Identities = 48/253 (18%), Positives = 85/253 (33%), Gaps = 35/253 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G A A AL  +G  V LV  +     +  A +  + +  +    Q D++
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
             Q +      +            + +L+NNAG+         + +++ +  N +     
Sbjct: 65  DQQQLRDTFRKVVDH------FGRLDILVNNAGV------NNEKNWEKTLQINLVSVISG 112

Query: 185 TKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
           T L L  +   N      I+N++S         Q               C     I  ++
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY------------CASKHGIVGFT 160

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 302
           +   L  +  L           V + A  PG V T I+  +    ++  +   K      
Sbjct: 161 RSAAL--AANLMN-------SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM 211

Query: 303 SPEKGINSVLDAA 315
               GI      A
Sbjct: 212 IKYYGILDPPLIA 224

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  102 bits (255), Expect = 7e-26
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 33/223 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG + G+G      L+  G  V    R+   L++ +     R+K  ++EA   DLS
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQW--RSKGFKVEASVCDLS 67

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
           S     +  +++      +  H  + +L+NNAGI+        T E Y  +MS N+  A+
Sbjct: 68  SRSERQELMNTVA-----NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            L+ L  P LK S   + +   +                            P   +Y  +
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSVSGAL---------------------AVPYEAVYGAT 161

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
           K  +   +  L          ++ V    PGV+ T+++     
Sbjct: 162 KGAMDQLTRCLAFEWA---KDNIRVNGVGPGVIATSLVEMTIQ 201

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 98.9 bits (246), Expect = 1e-24
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 36/220 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG  SG+G      L  EG  V     +     +  A++  R+        + D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS-----MFVRHDVS 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
           S         ++Q+         ++ +L+NNAGIL          E + +++  N    F
Sbjct: 63  SEADWTLVMAAVQRR------LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVF 116

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
              +  +  +K       I+N+ S +                              Y  S
Sbjct: 117 IGCQQGIAAMKE--TGGSIINMASVSSWL--------------------PIEQYAGYSAS 154

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
           K  +   +     +    +   + V +  P  + T +M+ 
Sbjct: 155 KAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQA 193

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 97.0 bits (241), Expect = 6e-24
 Identities = 41/245 (16%), Positives = 78/245 (31%), Gaps = 40/245 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             I   A  G+G   +  L +      ++          +A++ + N    +     D++
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINPKVNITFHTYDVT 65

Query: 125 -SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFF 183
                  K    +   L   D+       IN AGI      L     ++ ++ N+ G   
Sbjct: 66  VPVAESKKLLKKIFDQLKTVDIL------INGAGI------LDDHQIERTIAINFTGLVN 113

Query: 184 LTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
            T  +L     +       I N+ S T  N                          +Y  
Sbjct: 114 TTTAILDFWDKRKGGPGGIIANICSVTGFN--------------------AIHQVPVYSA 153

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-L 300
           SK  ++ F+  L +         V+  + +PG+ +T ++    S+L +       LL   
Sbjct: 154 SKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP 210

Query: 301 LQSPE 305
            Q+ E
Sbjct: 211 TQTSE 215

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 96.9 bits (241), Expect = 6e-24
 Identities = 54/263 (20%), Positives = 92/263 (34%), Gaps = 39/263 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + ++TG  +G+G A A   + EG  + +        +E       RN   R+   + D+S
Sbjct: 7   LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAI----RNLGRRVLTVKCDVS 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
               V  F   +              +L+NNAGI        LT E + +    N    F
Sbjct: 63  QPGDVEAFGKQVIST------FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGF 116

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            + K  +P +K +    RI+N+TS T+                             Y  +
Sbjct: 117 LMAKAFVPGMKRNG-WGRIINLTSTTYWLKI--------------------EAYTHYIST 155

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF-TVLKLLGLL 301
           K   + F+  L  +LG      ++V A  P +V+T                 +L+ +  L
Sbjct: 156 KAANIGFTRALASDLG---KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRL 212

Query: 302 QSPEKGINSVLDAALAPPETSGV 324
           Q P     +     LA  + S +
Sbjct: 213 QVPLDLTGAAA--FLASDDASFI 233

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 97.0 bits (241), Expect = 8e-24
 Identities = 55/262 (20%), Positives = 87/262 (33%), Gaps = 35/262 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG T G+G A     +  G  +    R+ + L+E ++    + K  ++     D S
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW--QKKGFQVTGSVCDAS 67

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
                 K   ++            + +LINN G + +      T E +   +STN   A+
Sbjct: 68  LRPEREKLMQTVSSMF-----GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY 122

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            L++L  PLLK S   + I   +                                IY  +
Sbjct: 123 HLSQLAHPLLKASGCGNIIFMSSIAGVV---------------------SASVGSIYSAT 161

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 302
           K  L   +  L      D  R     A  P V+ T +   V            K LG   
Sbjct: 162 KGALNQLARNLACEWASDGIR---ANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFG 218

Query: 303 SPEKGINSVLDAALAPPETSGV 324
            PE+  + V    L  P  S +
Sbjct: 219 EPEEVSSLVA--FLCMPAASYI 238

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.2 bits (239), Expect = 1e-23
 Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 45/249 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG   G+GA    A    G  VV+  +          ++              D++
Sbjct: 8   VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA------VFILCDVT 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 181
               V        +     D        +NNAG      R    + +G+ Q++  N +G 
Sbjct: 62  QEDDVKTLVSETIRRFGRLDCV------VNNAGHHPPPQRPEETSAQGFRQLLELNLLGT 115

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
           + LTKL LP L+ S     ++N++S          V                     Y  
Sbjct: 116 YTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVP--------------------YVA 153

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-----SLMAFTVLK 296
           +K  +   +  L  +        V V    PG + T +  E+ + +     S+    + +
Sbjct: 154 TKGAVTAMTKALALDES---PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ 210

Query: 297 LLGLLQSPE 305
            LG +  P 
Sbjct: 211 PLGRMGQPA 219

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.0 bits (236), Expect = 2e-23
 Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 41/223 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA  G+G     AL   G  VV V R++  L     +         +E   VDL 
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG------IEPVCVDLG 60

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
            + +  K    +            + LL+NNA +  +     +T E +D+  S N    F
Sbjct: 61  DWDATEKALGGIGP----------VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 110

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            +++++   + N  VP  IVNV+S      F                    P    Y  +
Sbjct: 111 QVSQMVARDMINRGVPGSIVNVSSMVAHVTF--------------------PNLITYSST 150

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
           K  + + +  +   LG  K R  SV   +P VV T++ ++V +
Sbjct: 151 KGAMTMLTKAMAMELGPHKIRVNSV---NPTVVLTDMGKKVSA 190

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.9 bits (233), Expect = 7e-23
 Identities = 54/263 (20%), Positives = 96/263 (36%), Gaps = 44/263 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA  G+G     AL   G  VV V R+   L   + +         +E   VDL 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------IEPVCVDLG 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
            +++  +   S+            + LL+NNA +        +T E +D+    N     
Sbjct: 63  DWEATERALGSVG----------PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVI 112

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            +++++   L    VP  IVNV+S   +                    +      +Y  +
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQCSQ--------------------RAVTNHSVYCST 152

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-LGLL 301
           K  L + +  +   LG      + V A +P VV T++ +   S        + ++ LG  
Sbjct: 153 KGALDMLTKVMALELG---PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKF 209

Query: 302 QSPEKGINSVLDAALAPPETSGV 324
              E  +N++L   L    +   
Sbjct: 210 AEVEHVVNAIL--FLLSDRSGMT 230

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.1 bits (233), Expect = 8e-23
 Identities = 52/276 (18%), Positives = 91/276 (32%), Gaps = 38/276 (13%)

Query: 60  GIKRPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARL 116
           G+   VC++TGA+ G G A A  L+R    G  +++  RS  +L +   ++ ++  D ++
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 117 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR-----LTPEGYD 171
                DL +   V +   ++++            LLINNA  L   S+           +
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPE--GLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 172 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 231
              + N      LT   L   ++SP  S+ V   S                        +
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL-------------------Q 161

Query: 232 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS--- 288
            Y    +Y   K    +    L       +   V V++  PG +  ++ +          
Sbjct: 162 PYKGWGLYCAGKAARDMLYQVLAA-----EEPSVRVLSYAPGPLDNDMQQLARETSKDPE 216

Query: 289 -LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSG 323
                  LK  G L         +L         SG
Sbjct: 217 LRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSG 252

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 92.6 bits (230), Expect = 2e-22
 Identities = 46/220 (20%), Positives = 71/220 (32%), Gaps = 40/220 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG   G+G A A A +REG  V L                   +      FQVDL 
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA--------EAIGGAFFQVDLE 58

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
             +  ++F +              + +L+NNA I A  S   +    + +++  N     
Sbjct: 59  DERERVRFVEEAA------YALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPM 112

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            L+ L    ++       IVNV S                                Y  S
Sbjct: 113 HLSALAAREMRKVGGG-AIVNVASVQGL--------------------FAEQENAAYNAS 151

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
           K  L+  +  L  +L       + V A  PG + T  + E
Sbjct: 152 KGGLVNLTRSLALDLA---PLRIRVNAVAPGAIATEAVLE 188

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 93.1 bits (231), Expect = 2e-22
 Identities = 44/226 (19%), Positives = 82/226 (36%), Gaps = 37/226 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDL 123
             I+TG+++G+G   A   ++EG +V + GRSS  L ET   I      + ++ +   D+
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 66

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG------ILATSSRLTPEGYDQMMSTN 177
           ++     +  +S  +          I +L+NNAG         T +    + Y + +  N
Sbjct: 67  TTEDGQDQIINSTLKQ------FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 120

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
                 +TK + P L  S      V+      +                       P   
Sbjct: 121 LQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA---------------------QPDFL 159

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
            Y  +K  L  ++     +L       + V +  PG+V+T     +
Sbjct: 160 YYAIAKAALDQYTRSTAIDLA---KFGIRVNSVSPGMVETGFTNAM 202

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 91.6 bits (227), Expect = 6e-22
 Identities = 43/222 (19%), Positives = 74/222 (33%), Gaps = 37/222 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             I+TG   GLGA AA      G  VVL        + T  ++             +D++
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVT 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAF 182
             +   +     ++         S+  L+NNAG          + E + +++  N  G F
Sbjct: 62  IEEDWQRVVAYAREE------FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVF 115

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
              K ++P +K++     IVN++S                                Y  S
Sbjct: 116 IGMKTVIPAMKDAG-GGSIVNISSAAGLM--------------------GLALTSSYGAS 154

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           K  +   S      LG   +  + V +  PG+  T +  E  
Sbjct: 155 KWGVRGLSKLAAVELG---TDRIRVNSVHPGMTYTPMTAETG 193

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 89.8 bits (222), Expect = 3e-21
 Identities = 46/222 (20%), Positives = 78/222 (35%), Gaps = 25/222 (11%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             IVTG   G+G A   A++  G +V ++ RS+    E    +  +    + +A+Q D+S
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV-GKEFGVKTKAYQCDVS 69

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGAF 182
           +   V K    +            I  LI NA   ++  ++ LT E +  +   N  G F
Sbjct: 70  NTDIVTKTIQQIDAD------LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVF 123

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
              + +  L         IV  +S + + +  + +N                    Y  S
Sbjct: 124 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN-------------GSLTQVFYNSS 170

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           K         L        S  + V A  PG V T+    + 
Sbjct: 171 KAACSNLVKGLAAEWA---SAGIRVNALSPGYVNTDQTAHMD 209

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 89.3 bits (221), Expect = 3e-21
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 32/223 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG + GLG   A  L+  G  VV+  R+    SE    +T +       AF+ D+S
Sbjct: 7   VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRCDVS 65

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
           +++ V K  +++++          +  ++N AGI     +     + + Q++  N  G +
Sbjct: 66  NYEEVKKLLEAVKEK------FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 119

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
           ++ +    LL+ S  PS I   +                            P    Y  S
Sbjct: 120 YVCREAFSLLRESDNPSIINIGSLTVEE--------------------VTMPNISAYAAS 159

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
           K  +   +  L +  G      + V    PG  +T +   V S
Sbjct: 160 KGGVASLTKALAKEWG---RYGIRVNVIAPGWYRTKMTEAVFS 199

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 6e-21
 Identities = 40/223 (17%), Positives = 75/223 (33%), Gaps = 36/223 (16%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR---NKDARLEAFQV 121
           V IVTG  +G+G A    L   G +VV+  R    L     ++ +     K AR+   Q 
Sbjct: 14  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 73

Query: 122 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 179
           ++ + + V     S             I  L+NN G   L+ +  ++ +G+  ++ TN  
Sbjct: 74  NIRNEEEVNNLVKSTLDT------FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 127

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
           G F++ K +          S +  +                            +P A   
Sbjct: 128 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKA----------------------GFPLAVHS 165

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
             ++  +   +  L           + +    PGV+ +    E
Sbjct: 166 GAARAGVYNLTKSLALEWA---CSGIRINCVAPGVIYSQTAVE 205

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 87.8 bits (217), Expect = 2e-20
 Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 44/251 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+TG   G+G   A    R G  VV+   +     +   +I S +    +     D++
Sbjct: 8   VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD---VISFVHCDVT 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS----SRLTPEGYDQMMSTNYIG 180
             + V    D+          H  + ++  N G+L+T+         E + ++M  N  G
Sbjct: 65  KDEDVRNLVDTTIAK------HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 118

Query: 181 AFFLTKLLLP--LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 238
           AF + K      +           +++SFT                           + +
Sbjct: 119 AFLVAKHAARVMIPAKKGSIVFTASISSFTAG----------------------EGVSHV 156

Query: 239 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----PSFLSLMAFTV 294
           Y  +K  +L  +  L   LG      + V    P +V + ++ +V     S +  +A   
Sbjct: 157 YTATKHAVLGLTTSLCTELG---EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA 213

Query: 295 LKLLGLLQSPE 305
             L G L   E
Sbjct: 214 ANLKGTLLRAE 224

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 87.0 bits (215), Expect = 3e-20
 Identities = 41/225 (18%), Positives = 74/225 (32%), Gaps = 35/225 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 123
             I+TG+++G+G +AA   ++EG  V + GR+   L ET   I      A ++ A   D+
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 65

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL----TPEGYDQMMSTNYI 179
           +         ++             I +L+NNAG              E Y +    N+ 
Sbjct: 66  TEASGQDDIINTTLAK------FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 119

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
               +T+                       +        +  + G      + +     Y
Sbjct: 120 AVIEMTQ----------------KTKEHLIKTKGEIVNVSSIVAGP-----QAHSGYPYY 158

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
             +K  L  ++     +L       V V +  PG V T  M  + 
Sbjct: 159 ACAKAALDQYTRCTAIDLI---QHGVRVNSVSPGAVATGFMGAMG 200

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 87.0 bits (215), Expect = 3e-20
 Identities = 34/221 (15%), Positives = 66/221 (29%), Gaps = 32/221 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TG  SGLG A       EG  V ++ +S+  L+E   D         +     D+ 
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVR 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPE-GYDQMMSTNYIGAFF 183
           S +   +            D       + + +  L      + +  +D++   N  G   
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121

Query: 184 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 243
             K  LP L  S     ++   S                               +Y  +K
Sbjct: 122 AVKACLPALVAS--RGNVIFTISNAGFYP--------------------NGGGPLYTAAK 159

Query: 244 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
             ++       R L  + + +V V     G + +++     
Sbjct: 160 HAIVGLV----RELAFELAPYVRVNGVGSGGINSDLRGPSS 196

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.0 bits (215), Expect = 6e-20
 Identities = 47/222 (21%), Positives = 77/222 (34%), Gaps = 28/222 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  GLG A A A +  G  VV+                +      +        
Sbjct: 9   VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 68

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
           +    ++  + L +  LD+     I +++NNAGIL   S  R++ E +D +   +  G+F
Sbjct: 69  ANYDSVEAGEKLVKTALDT--FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSF 126

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            +T+     +K      RI+   S +       Q N                    Y  +
Sbjct: 127 QVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQAN--------------------YSAA 165

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           KL LL  +  L      +     + IA  P          +P
Sbjct: 166 KLGLLGLANTLVIEGRKNNIH-CNTIA--PNAGSRMTETVMP 204

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 85.6 bits (211), Expect = 7e-20
 Identities = 47/264 (17%), Positives = 86/264 (32%), Gaps = 47/264 (17%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFH-------VVLVGRSSHLLSETMADITSRNKDAR 115
           + + ++TGA  G+G A A   +R   H       +VL  R++  L +   +   R + A 
Sbjct: 1   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC--RAEGAL 58

Query: 116 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMS 175
            +    D+S    V +    + +     D   +   +     +       T E +D  M+
Sbjct: 59  TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDL----TEEDFDYTMN 114

Query: 176 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 235
           TN  G FFLT+ L  L++           +    +   ++ +                  
Sbjct: 115 TNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC---------------- 158

Query: 236 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL 295
                 SK         +          +V +    PG V T +  +V            
Sbjct: 159 -----MSKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMWGKVDD---------- 200

Query: 296 KLLGLLQSPEKGINSVLDAALAPP 319
           ++  L+  PE     V+ A L P 
Sbjct: 201 EMQALMMMPEDIAAPVVQAYLQPS 224

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 85.5 bits (211), Expect = 8e-20
 Identities = 29/220 (13%), Positives = 55/220 (25%), Gaps = 41/220 (18%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           IVT      G  +A  LS  G  V     S     E         +       Q+   S 
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL--------EAFAETYPQLKPMSE 55

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGAFF 183
           Q   +  +++         +  + +L++N           +   E Y   +    I  F 
Sbjct: 56  QEPAELIEAVT------SAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFA 109

Query: 184 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 243
           L                          +    + +   I          +     Y  ++
Sbjct: 110 LV---------------------NAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSAR 148

Query: 244 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
                 +  L + LG     ++ V A  P  + +      
Sbjct: 149 AGACTLANALSKELG---EYNIPVFAIGPNYLHSEDSPYF 185

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 1e-19
 Identities = 50/256 (19%), Positives = 81/256 (31%), Gaps = 37/256 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             IVTGA+ G+G   AY L++ G HVV+  RS   L + ++        A        + 
Sbjct: 16  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTME 74

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
                 +F     + +   DM      L +                 + M  N++    L
Sbjct: 75  DMTFAEQFVAQAGKLMGGLDMLI----LNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 130

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
           T   LP+LK S     IV V+S   +                      YP    Y  SK 
Sbjct: 131 TVAALPMLKQS--NGSIVVVSSLAGK--------------------VAYPMVAAYSASKF 168

Query: 245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 304
            L  F   + +   + +   VS+     G++ T    +  S +  M              
Sbjct: 169 ALDGFFSSIRKEYSVSRVN-VSITLCVLGLIDTETAMKAVSGIVHMQ---------AAPK 218

Query: 305 EKGINSVLDAALAPPE 320
           E+    ++       E
Sbjct: 219 EECALEIIKGGALRQE 234

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 82.4 bits (203), Expect = 8e-19
 Identities = 47/262 (17%), Positives = 78/262 (29%), Gaps = 45/262 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +V+G   G+GA+   A+  EG  VV             A++             +D++
Sbjct: 8   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVT 62

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 182
                    D+             + +L+NNAGI  + T        + +++  N  G F
Sbjct: 63  QPAQWKAAVDTAVTA------FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVF 116

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
              +                                   I                Y  +
Sbjct: 117 LGIR---------------------AVVKPMKEAGRGSIINISSIEGLAGTVACHGYTAT 155

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 302
           K  +   +      LG      + V +  PG+VKT +   VP  +   A      LG   
Sbjct: 156 KFAVRGLTKSTALELG---PSGIRVNSIHPGLVKTPMTDWVPEDIFQTA------LGRAA 206

Query: 303 SPEKGINSVLDAALAPPETSGV 324
            P +  N V+   LA  E+S  
Sbjct: 207 EPVEVSNLVV--YLASDESSYS 226

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 81.2 bits (200), Expect = 3e-18
 Identities = 44/261 (16%), Positives = 78/261 (29%), Gaps = 35/261 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             I+TGA +G+G   A   +  G  VV+   ++   +  + +I      A   A + D++
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA--FACRCDIT 70

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTPEGYDQMMSTNYIGAFF 183
           S Q +    D              + +L+NNAG        +    + +    N    F 
Sbjct: 71  SEQELSALADFAISK------LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFH 124

Query: 184 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 243
                                 S               +T               Y  SK
Sbjct: 125 ---------------------LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK 163

Query: 244 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 303
                    +  +LG    +++ V    PG + T+ ++ V +            +  L  
Sbjct: 164 AAASHLVRNMAFDLG---EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQ 220

Query: 304 PEKGINSVLDAALAPPETSGV 324
           P+   N+ L   L  P  S V
Sbjct: 221 PQDIANAAL--FLCSPAASWV 239

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 79.8 bits (196), Expect = 1e-17
 Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 32/221 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGATSG+G   A  L +EG  V +  R    L  T+ ++     +A  +    D+ 
Sbjct: 4   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA--DGRTCDVR 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
           S   +     ++ +       +  + +L+NNAG     +   L  E +  ++ TN  G F
Sbjct: 62  SVPEIEALVAAVVER------YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVF 115

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            +TK +L         +  +   + T                      +    A  Y  S
Sbjct: 116 RVTKQVLKAGGMLERGTGRIVNIASTGGK-------------------QGVVHAAPYSAS 156

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
           K  ++ F+  L   L       ++V A  PG V+T +   V
Sbjct: 157 KHGVVGFTKALGLELA---RTGITVNAVCPGFVETPMAASV 194

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.3 bits (197), Expect = 1e-17
 Identities = 49/278 (17%), Positives = 86/278 (30%), Gaps = 54/278 (19%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH------LLSETMADITSRNKDARL 116
           R V ++TG +SG+G   A  L+ +      V  +         L E    +        L
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL--ACPPGSL 59

Query: 117 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMST 176
           E  Q+D+   +SV   ++ + +  +D  + ++   L+           L  +    ++  
Sbjct: 60  ETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP------LEALGEDAVASVLDV 113

Query: 177 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 236
           N +G   + +  LP +K       +V  +                            P  
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG---------------------LPFN 152

Query: 237 RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------- 285
            +Y  SK  L      L   L       V +   + G V T  M +V             
Sbjct: 153 DVYCASKFALEGLCESLAVLLL---PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDI 209

Query: 286 -----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 318
                F   +A +        Q+PE+     L A  AP
Sbjct: 210 HTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP 247

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 79.4 bits (195), Expect = 2e-17
 Identities = 42/221 (19%), Positives = 88/221 (39%), Gaps = 34/221 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 123
           V ++TG+++GLG + A   + E   VV+  RS     +  + +I     +A   A + D+
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA--IAVKGDV 66

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 181
           +    V+    S  +          + ++INNAG+    +S  ++   +++++ TN  GA
Sbjct: 67  TVESDVINLVQSAIKE------FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGA 120

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
           F  ++  +     + +   ++N++S   +                      +P    Y  
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKI--------------------PWPLFVHYAA 160

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
           SK  + + +  L         + + V    PG + T I  E
Sbjct: 161 SKGGMKLMTETLALEYA---PKGIRVNNIGPGAINTPINAE 198

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 79.0 bits (194), Expect = 2e-17
 Identities = 47/231 (20%), Positives = 83/231 (35%), Gaps = 36/231 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           V + TGA  G+G   A  L R G  VV+  G SS    E +A++          A Q D+
Sbjct: 8   VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQG--VAIQADI 65

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 181
           S    V+   D              +  +++N+G+        +T E +D++ + N  G 
Sbjct: 66  SKPSEVVALFDKAVSH------FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQ 119

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
           FF+ +  L   +         ++ +       +A                      +Y  
Sbjct: 120 FFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHA----------------------LYAG 157

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF 292
           SK  +  F      + G   ++ V+V    PG VKT++  E     +   +
Sbjct: 158 SKAAVEGFCRAFAVDCG---AKGVTVNCIAPGGVKTDMFDENSWHYAPGGY 205

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 78.2 bits (192), Expect = 3e-17
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TG  SGLG A A  L+ EG  + LV  SS  L  + A +     DA +     D+S
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 157
               V  +  +  +          I    NNAG
Sbjct: 66  DEAQVEAYVTATTER------FGRIDGFFNNAG 92

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 77.1 bits (189), Expect = 9e-17
 Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 29/218 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           VC+VTGA   +G A A  L+ EG  + L+  +   L +  A +  +  +AR  ++  D++
Sbjct: 7   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEAR--SYVCDVT 64

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
           S ++V+   DS+ +     D   +        G  A       + + ++++ N  GAF  
Sbjct: 65  SEEAVIGTVDSVVRDFGKIDFLFNNA---GYQGAFAPVQDYPSDDFARVLTINVTGAFH- 120

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
                           +  V+       +   VN  ++ G      K  P    Y  SK 
Sbjct: 121 ---------------VLKAVSRQMITQNYGRIVNTASMAGV-----KGPPNMAAYGTSKG 160

Query: 245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
            ++  +     +L      ++ V A  PG +    M E
Sbjct: 161 AIIALTETAALDLA---PYNIRVNAISPGYMGPGFMWE 195

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 76.8 bits (188), Expect = 1e-16
 Identities = 41/218 (18%), Positives = 75/218 (34%), Gaps = 16/218 (7%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           P  ++TG    +G + A  L ++GF VV+  R S   ++ +    +  +       + DL
Sbjct: 2   PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDL 61

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL----TPEGYDQMMSTNYI 179
           S   S+L   + +      +       +L+NNA     +  L    T    D       +
Sbjct: 62  SLSSSLLDCCEDIIDCSFRA--FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQV 119

Query: 180 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
              F +  + PL        R     ++  RN+    + +        +     P   +Y
Sbjct: 120 AELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD-------AMTDLPLPGFCVY 172

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 277
             +K  L   +      L     RH+ V A  PG+   
Sbjct: 173 TMAKHALGGLTRAAALELA---PRHIRVNAVAPGLSLL 207

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 75.9 bits (186), Expect = 2e-16
 Identities = 44/220 (20%), Positives = 76/220 (34%), Gaps = 33/220 (15%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG + G+G A    L+  G  V    R+   L E +     R K   +E    DL 
Sbjct: 8   TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIW--REKGLNVEGSVCDLL 65

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
           S     K   ++            + +L+NNAG++        T + Y+ +M TN+  A+
Sbjct: 66  SRTERDKLMQTVAHVF-----DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            L++                        +     +   +I G   L S     A     S
Sbjct: 121 HLSQ----------------IAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSA-----S 159

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
           K  +   +  L          ++ V +  PGV+ T ++  
Sbjct: 160 KGAINQMTKSLACEWA---KDNIRVNSVAPGVILTPLVET 196

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 75.1 bits (184), Expect = 3e-16
 Identities = 36/222 (16%), Positives = 75/222 (33%), Gaps = 40/222 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TGA  G+G A     ++EG  +V        L E    + +           +D++
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-------HPVVMDVA 59

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 182
              SV +                 +  +++ AGI   +   ++  E ++ ++  N  G+F
Sbjct: 60  DPASVERGFAEALAH------LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSF 113

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            + K     ++     S ++  +     N+  A                       Y  S
Sbjct: 114 LVAKAASEAMREKNPGSIVLTASRVYLGNLGQA----------------------NYAAS 151

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
              ++  +  L   LG      + V    PG ++T +  +VP
Sbjct: 152 MAGVVGLTRTLALELG---RWGIRVNTLAPGFIETRMTAKVP 190

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 75.2 bits (184), Expect = 4e-16
 Identities = 43/222 (19%), Positives = 78/222 (35%), Gaps = 33/222 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G A A  L ++GF V +   +        ++I      A   A +VD+S
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA--VAVKVDVS 60

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM--STNYIGAF 182
               V    +  ++            +++NNAG+  ++   +          + N  G  
Sbjct: 61  DRDQVFAAVEQARKT------LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVI 114

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
           +  +  +   K      +I+N  S                           P   +Y  S
Sbjct: 115 WGIQAAVEAFKKEGHGGKIINACSQAGHV--------------------GNPELAVYSSS 154

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           K  +   +    R+L       ++V    PG+VKT +  E+ 
Sbjct: 155 KFAVRGLTQTAARDLA---PLGITVNGYCPGIVKTPMWAEID 193

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 7e-16
 Identities = 40/221 (18%), Positives = 74/221 (33%), Gaps = 42/221 (19%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V I+T A  G+G AAA A +REG  V+    +   L E                      
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP----------------- 50

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
             Q+ +      +Q    ++    + +L N AG +   T      + +D  M+ N    +
Sbjct: 51  GIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMY 110

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            + K  LP +        I+N++S                     ++     C   Y  +
Sbjct: 111 LMIKAFLPKMLAQK-SGNIINMSSVASS-----------------VKGVVNRCV--YSTT 150

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
           K  ++  +  +  +      + +      PG V T  ++E 
Sbjct: 151 KAAVIGLTKSVAADFI---QQGIRCNCVCPGTVDTPSLQER 188

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 73.2 bits (178), Expect = 2e-15
 Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 17/219 (7%)

Query: 67  IVTGATSGLGAAAAYAL---SREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 123
           ++TG   GLG     AL    +   H+    R+     + + D+   + +  +    +  
Sbjct: 6   LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSNIHILEIDL-- 62

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFF 183
                      +  + +      + +      A   A  + +  +     + TN +    
Sbjct: 63  -RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 184 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 243
           L K  LPLLK +   +    +       +  + +          ++         Y  SK
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG-------SIQGNTDGGMYAYRTSK 174

Query: 244 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
             L   +  L  +L     + +  ++  PG VKT++   
Sbjct: 175 SALNAATKSLSVDLY---PQRIMCVSLHPGWVKTDMGGS 210

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 72.8 bits (178), Expect = 2e-15
 Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 8/144 (5%)

Query: 64  PVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVD 122
           PV +VTGA+ G+G A A +L + G  V++   RS+    E    I +    A    F  D
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA--ITFGGD 59

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAF 182
           +S    V     +        D+  +   +  +  ++          +D+++  N  G F
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRM----KKSQWDEVIDLNLTGVF 115

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTS 206
             T+    ++       RI+N+ S
Sbjct: 116 LCTQAATKIMMKKR-KGRIINIAS 138

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 72.0 bits (176), Expect = 4e-15
 Identities = 42/220 (19%), Positives = 89/220 (40%), Gaps = 30/220 (13%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTGA  G+G   A  L++   HV+ + R+       + +I S   ++    +  D+S
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYES--SGYAGDVS 69

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
             + +      +   +L    +  I +            R+  + ++ ++ TN    F++
Sbjct: 70  KKEEI----SEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYI 125

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
           T+ +   + N+    RI+N++S         Q N                    Y  SK 
Sbjct: 126 TQPISKRMINNR-YGRIINISSIVGLTGNVGQAN--------------------YSSSKA 164

Query: 245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
            ++ F+  L + L    SR+++V A  PG + +++  ++ 
Sbjct: 165 GVIGFTKSLAKELA---SRNITVNAIAPGFISSDMTDKIS 201

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 71.4 bits (174), Expect = 9e-15
 Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 32/220 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             ++TG+  G+G A A A  REG  V +   +      T A+I          A  +D++
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVT 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
              S+ +    L       D    I +       LA    +T E YD++ + N  G  F+
Sbjct: 62  DQASIDRCVAELLDRWGSID----ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFM 117

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
            +        +             +      +     +               +Y  +K 
Sbjct: 118 MQ------AVARAMIAGGRGGKIINMASQAGRRGEALVG--------------VYCATKA 157

Query: 245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
            ++  +     NL       ++V A  PGVV       V 
Sbjct: 158 AVISLTQSAGLNLI---RHGINVNAIAPGVVDGEHWDGVD 194

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 69.7 bits (170), Expect = 2e-14
 Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 40/222 (18%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTGA SG+G AA    +REG  +V V R   LL+E +A +     +A   A   D+S
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVS 61

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 182
             ++V    +++    L+      +  + + AG+   A S  L  E +++++  N  G+F
Sbjct: 62  DPKAV----EAVFAEALEE--FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSF 115

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            + +    +L+         +V       + +                        Y   
Sbjct: 116 LVARKAGEVLEEGGSLVLTGSVAGLGAFGLAH------------------------YAAG 151

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
           KL ++  +  L   L     + V V    PG+++T +   +P
Sbjct: 152 KLGVVGLARTLALELA---RKGVRVNVLLPGLIQTPMTAGLP 190

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 69.5 bits (169), Expect = 4e-14
 Identities = 39/221 (17%), Positives = 74/221 (33%), Gaps = 28/221 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V +VTG+TSG+G   A AL+ +G  +VL G       E +    +     ++     DLS
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
             ++V    D+  + +   D+  +   + + A I         E +D +++ N       
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF----PTEKWDAILALNL------ 115

Query: 185 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 244
                            V   +         Q     I                Y  +K 
Sbjct: 116 ---------------SAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160

Query: 245 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 285
            ++ F+            + ++  A  PG V+T ++ +  S
Sbjct: 161 GVVGFTKVTALETA---GQGITANAICPGWVRTPLVEKQIS 198

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.7 bits (167), Expect = 5e-14
 Identities = 23/221 (10%), Positives = 49/221 (22%), Gaps = 43/221 (19%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +V G    LG+    A     + V  +            D+    + +     ++  S
Sbjct: 4   RVLVYGGRGALGSRCVQAFRARNWWVASI------------DVVENEEASASVIVKMTDS 51

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 181
             +      D +   +        +  ++  AG  A  +       +  D M   +   +
Sbjct: 52  FTEQA----DQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTS 107

Query: 182 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 241
              + L                     H                                
Sbjct: 108 TISSHLA------------------TKHLKEGGLLTLAGAKAALDGTPGMIGYGM----- 144

Query: 242 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
           +K  +      L            + IA  P  + T + R+
Sbjct: 145 AKGAVHQLCQSLAGKNSGMP-SGAAAIAVLPVTLDTPMNRK 184

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 6e-14
 Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 32/220 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V  +TG  +GLG      LS  G   V+  R   +L  T   I+S+  + ++ A Q D+ 
Sbjct: 27  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVR 85

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGAF 182
               V      L +            ++INNA    ++ + RL+P  +  +      G  
Sbjct: 86  DPDMVQNTVSELIKV------AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTA 139

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
           F+T  +   L  +   +  +++T+          V + +                    +
Sbjct: 140 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS--------------------A 179

Query: 243 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 282
           K  +   S  L    G      +      PG +KT     
Sbjct: 180 KAGVEAMSKSLAAEWG---KYGMRFNVIQPGPIKTKGAFS 216

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 67.9 bits (165), Expect = 1e-13
 Identities = 46/246 (18%), Positives = 83/246 (33%), Gaps = 43/246 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +VTG  SGLG AAA AL   G+ VV++                R +   L   + D++
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDL--------------RREGEDLIYVEGDVT 48

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
             + V +     Q+      + S+  + +    IL        E + +++  N +G F +
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEK-ILGKEGPHGLESFRRVLEVNLLGTFNV 107

Query: 185 TKLLLPLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
            +L    ++ +P         IVN  S                        +       Y
Sbjct: 108 LRLAAWAMRENPPDAEGQRGVIVNTASVAAF--------------------EGQIGQAAY 147

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG 299
             SK  ++  +    R L       + V+   PG+  T +++ +P          +    
Sbjct: 148 AASKGGVVALTLPAARELA---GWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPP 204

Query: 300 LLQSPE 305
            L  PE
Sbjct: 205 RLGRPE 210

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 68.2 bits (166), Expect = 1e-13
 Identities = 44/221 (19%), Positives = 87/221 (39%), Gaps = 32/221 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 123
           V +VTGA  G+G   A  L R G  V++   +S     E +A I     DA     + ++
Sbjct: 20  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA--ACVKANV 77

Query: 124 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFF 183
              + +++  +   +     D+  S   +++   +      +TPE +D++ + N  G FF
Sbjct: 78  GVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK----DVTPEEFDRVFTINTRGQFF 133

Query: 184 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 243
           + +                      H  +    +   +ITG+     K  P   +Y  SK
Sbjct: 134 VAREAYK------------------HLEIGGRLILMGSITGQA----KAVPKHAVYSGSK 171

Query: 244 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 284
             +  F+  +  ++     + ++V    PG +KT++   V 
Sbjct: 172 GAIETFARCMAIDMA---DKKITVNVVAPGGIKTDMYHAVC 209

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 67.0 bits (163), Expect = 2e-13
 Identities = 40/268 (14%), Positives = 83/268 (30%), Gaps = 53/268 (19%)

Query: 60  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 119
           GI+    +V  A+ G+G A A  LS+EG  V +  R+  LL  +                
Sbjct: 1   GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH-----------RYV 49

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTN 177
             DL     +L             +    + +L+ NA          LT E + + + + 
Sbjct: 50  VCDLRKDLDLLF------------EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSL 97

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
           ++    + +                      +      +     +    F          
Sbjct: 98  FLNMIKIVR---------------------NYLPAMKEKGWGRIVAITSFSVISPIENLY 136

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREVPSFLSLMAFTVLK 296
               +++ L  F     + L  + + + ++V    PG  +T  ++E+ S           
Sbjct: 137 TSNSARMALTGFL----KTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQI 192

Query: 297 LLGLLQSPEKGINSVLDAALAPPETSGV 324
            +  +  PE+  + V    L   + S +
Sbjct: 193 PMRRMAKPEEIASVVA--FLCSEKASYL 218

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 7e-12
 Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 33/226 (14%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           V ++TG  SGLG A A  L  +G   VL+   +         + +    A      V   
Sbjct: 7   VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAP---ADVTSE 63

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
                       +   +D  ++ +   + +    L      T E + +++  N +G F +
Sbjct: 64  KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNV 123

Query: 185 TKLLLPLLKNSPVP-----SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 239
            +L+   +  +          I+N  S         Q                      Y
Sbjct: 124 IRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA--------------------AY 163

Query: 240 EYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREVP 284
             SK  ++  +      +  D +   + V+   PG+  T ++  +P
Sbjct: 164 SASKGGIVGMT----LPIARDLAPIGIRVMTIAPGLFGTPLLTSLP 205

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.9 bits (147), Expect = 2e-11
 Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 51/271 (18%)

Query: 56  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR 115
           PP    +    +VTG   G+G A A  L+ +G  V +  R S                  
Sbjct: 3   PPFVS-R--SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-------------GAPKG 46

Query: 116 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMS 175
           L   +VD++   +V +   ++++     ++  S   L  +A ++    R+T E ++++++
Sbjct: 47  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLM----RMTEEKFEKVIN 102

Query: 176 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 235
            N  GAF + +                  +    RN F   +   +++G + + ++    
Sbjct: 103 ANLTGAFRVAQ----------------RASRSMQRNKFGRMIFIGSVSGLWGIGNQANYA 146

Query: 236 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--SLMAFT 293
           A     SK  ++  +  + R L         V    PG + T++ R +   +    + F 
Sbjct: 147 A-----SKAGVIGMARSIARELSKANVTANVV---APGYIDTDMTRALDERIQQGALQFI 198

Query: 294 VLKLLGLLQSPEKGINSVLDAALAPPETSGV 324
             K +G   +P +    V    LA  + S +
Sbjct: 199 PAKRVG---TPAEVAGVVS--FLASEDASYI 224

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 60.3 bits (145), Expect = 3e-11
 Identities = 28/220 (12%), Positives = 60/220 (27%), Gaps = 43/220 (19%)

Query: 67  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 126
           IV G    LG+A      + G+ V+ +  S++  ++  ++I         E  Q  L   
Sbjct: 6   IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD--SNILVDGNKNWTEQEQSILEQT 63

Query: 127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAFF 183
            S L+                 +  +   AG  A  S       +  D M+  +   +  
Sbjct: 64  ASSLQGSQ--------------VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 109

Query: 184 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 243
             K       +      +    +        + +                        +K
Sbjct: 110 AAK---LATTHLKPGGLLQLTGAAAAMGPTPSMIGYGM--------------------AK 146

Query: 244 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 283
             +   +  L          + +V+   P  + T + R+ 
Sbjct: 147 AAVHHLTSSLAAKDSGLP-DNSAVLTIMPVTLDTPMNRKW 185

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 60.2 bits (145), Expect = 5e-11
 Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 20/157 (12%)

Query: 65  VCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
             +V G T+   LG A A  L   G  V L  ++  L  E      +        A    
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQ 69

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA------GILATSSRLTPEGYDQMMST 176
                ++              +    +  L++         +         + +   +  
Sbjct: 70  DEELDALFAG---------VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 177 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 213
           +      + +   PLL+       IV +T +    V 
Sbjct: 121 SAYSLVAVARRAEPLLREG---GGIVTLTYYASEKVV 154

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 59.8 bits (144), Expect = 6e-11
 Identities = 41/223 (18%), Positives = 81/223 (36%), Gaps = 39/223 (17%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +VTGA+ G+G A A  L+  G  V+    S +        +      A  +   ++++
Sbjct: 6   IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVT 60

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM--STNYIGAF 182
              S+                   + +L+NNAGI   +  +  +  +      TN    F
Sbjct: 61  DPASI------ESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVF 114

Query: 183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 242
            L+K ++  +       RI+ + S         Q N                    Y  +
Sbjct: 115 RLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGGQAN--------------------YAAA 153

Query: 243 KLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREVP 284
           K  L+ FS    ++L  + +   ++V    PG ++T++ R + 
Sbjct: 154 KAGLIGFS----KSLAREVASRGITVNVVAPGFIETDMTRALS 192

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 59.2 bits (142), Expect = 1e-10
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 29/126 (23%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
           + +++G  +G+GAA    L   G  +V +       +E +AD+++     +  A  +   
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD---AEVIADLSTAEGRKQAIADVLA-- 57

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
                                   +  L+  AG+   +     +    ++S NY GA  L
Sbjct: 58  -------------------KCSKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATEL 93

Query: 185 TKLLLP 190
               LP
Sbjct: 94  MDAFLP 99

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 57.7 bits (138), Expect = 4e-10
 Identities = 16/58 (27%), Positives = 24/58 (41%)

Query: 63  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 120
            PV +VTGA   LG + A  L  EG+ V L    S   +  ++   +  +       Q
Sbjct: 2   VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 59

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 54.2 bits (129), Expect = 5e-09
 Identities = 48/267 (17%), Positives = 79/267 (29%), Gaps = 49/267 (18%)

Query: 63  RP--VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAF 119
           +P    +VTG T G+G   A  L+R G  H++LV RS          +      A LEA 
Sbjct: 7   KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELV------AELEAL 60

Query: 120 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLIN--NAGILATSSRLTPEGYDQMMSTN 177
               +     +  ++S+++ L        +  + +        T   LT E  ++     
Sbjct: 61  GARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAK 120

Query: 178 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 237
            +GA  L +L   L                     F    +  +  G         P   
Sbjct: 121 VLGARNLHELTREL-----------------DLTAFVLFSSFASAFG--------APGLG 155

Query: 238 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL 297
            Y      L   + +            +   A   G    + M E P         V+++
Sbjct: 156 GYAPGNAYLDGLAQQRRS-------DGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEM 208

Query: 298 LGLLQSPEKGINSVLDAALAPPETSGV 324
                 PE      L  AL   E   +
Sbjct: 209 -----PPETAC-RALQNALDRAEVCPI 229

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 53.8 bits (128), Expect = 8e-09
 Identities = 36/270 (13%), Positives = 78/270 (28%), Gaps = 47/270 (17%)

Query: 65  VCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 122
             +VTG  S   +    A A+ REG  +    ++  L    + +  ++         Q D
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK-GRVEEFAAQLGSDI--VLQCD 63

Query: 123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMS 175
           ++   S+      L +     D        +++ G            + +T EG+     
Sbjct: 64  VAEDASIDTMFAELGKVWPKFDG------FVHSIGFAPGDQLDGDYVNAVTREGFKIAHD 117

Query: 176 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 235
            +      + K    +L        ++ ++                            P 
Sbjct: 118 ISSYSFVAMAKACRSMLNPGSA---LLTLSYLGAERAI--------------------PN 154

Query: 236 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL 295
             +   +K  L      +   +G +  R     A   G ++T     +  F  ++A    
Sbjct: 155 YNVMGLAKASLEANVRYMANAMGPEGVRVN---AISAGPIRTLAASGIKDFRKMLAHCEA 211

Query: 296 KL-LGLLQSPEKGINSVLDAALAPPETSGV 324
              +    + E   NS     L    ++G+
Sbjct: 212 VTPIRRTVTIEDVGNSAA--FLCSDLSAGI 239

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.4 bits (121), Expect = 6e-08
 Identities = 22/239 (9%), Positives = 63/239 (26%), Gaps = 18/239 (7%)

Query: 65  VCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLE----- 117
           +C + G     G G   A  LS+    ++                  +  +  +      
Sbjct: 4   ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKK 63

Query: 118 -----AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQ 172
                    D S   +    +++      +   + +I+ + N   I     ++    +  
Sbjct: 64  MNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANL--IHQKYGKINMLVHSL 121

Query: 173 MMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC 232
             +         T        ++   S    ++   +        ++         +   
Sbjct: 122 ANAKEVQKDLLNTS--RKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV 179

Query: 233 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA 291
                    +K  L   +  L  +LG + +  ++ I+   G +K+     +    +   
Sbjct: 180 PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTIS--AGPLKSRAATAINKLNNTYE 236

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.1 bits (113), Expect = 3e-07
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 1/50 (2%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 114
           V ++ G    LG   A  L+  G  +V+  R         A+      DA
Sbjct: 3   VALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDA 51

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 48.0 bits (113), Expect = 3e-07
 Identities = 18/142 (12%), Positives = 37/142 (26%), Gaps = 18/142 (12%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 124
             +V   T  +G  +A  L+ EG  VVL GR           +   NK  ++     + +
Sbjct: 25  KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSV---NKRFKVNVTAAETA 81

Query: 125 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 184
              S         + +  +        +            L    +    S   +  +  
Sbjct: 82  DDASR-------AEAVKGAHF------VFTAGA--IGLELLPQAAWQNESSIEIVADYNA 126

Query: 185 TKLLLPLLKNSPVPSRIVNVTS 206
              L     ++    +      
Sbjct: 127 QPPLGIGGIDATDKGKEYGGKR 148

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 47.1 bits (110), Expect = 1e-06
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 65  VCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD 106
             +V+G    S +    A     +G  +VL G     L + + D
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD 51

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 46.6 bits (109), Expect = 2e-06
 Identities = 5/52 (9%), Positives = 15/52 (28%), Gaps = 3/52 (5%)

Query: 65  VCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 114
             ++ G  +   +    A +   +G  +     +  L  + +  I       
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE-KRVRPIAQELNSP 57

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 46.3 bits (108), Expect = 3e-06
 Identities = 9/56 (16%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 65  VCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 118
              + G    +G G A A +L+  G  +++      L     +    +   +R+  
Sbjct: 10  RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 39.4 bits (90), Expect = 4e-04
 Identities = 9/72 (12%), Positives = 21/72 (29%)

Query: 68  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 127
           + G T  +G     A    G    ++ R   + +     +    K    +  +  L   Q
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQ 67

Query: 128 SVLKFKDSLQQW 139
            ++     +   
Sbjct: 68  RLVDALKQVDVV 79

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 5/70 (7%)

Query: 62  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 121
           ++    V GAT   GA+     +  G HV     S                   +  FQ 
Sbjct: 2   QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GLIAEELQAIPNVTLFQG 56

Query: 122 DLSSFQSVLK 131
            L +   ++ 
Sbjct: 57  PLLNNVPLMD 66

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

 Score = 36.3 bits (82), Expect = 0.004
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 65  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT 108
           + +V G+ SGL   AA  L   G  V +  RS   LS     I 
Sbjct: 7   IAVVGGSISGL--TAALMLRDAGVDVDVYERSPQPLSGFGTGIV 48

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	369
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.81
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.8
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.74
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.73
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.72
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.72
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.71
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.71
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.68
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.64
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.63
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.62
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.62
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.6
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.59
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.59
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.58
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.56
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.55
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.52
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.49
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.48
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.34
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.25
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.23
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.13
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.12
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.92
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.9
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.77
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.09
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.97
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.94
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.8
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.79
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.74
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.68
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.67
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.64
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.63
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.61
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.61
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.59
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.59
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.56
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.53
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.49
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.47
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.44
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.39
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.39
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.36
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.35
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.33
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.3
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.26
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.24
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.15
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.15
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.13
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.12
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.1
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.08
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.05
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.05
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.02
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.01
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.96
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.96
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.96
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.95
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.95
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.93
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.93
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.9
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.87
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.85
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.83
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.82
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.76
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.74
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.7
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.66
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.64
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.58
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.55
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.48
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.37
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.34
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.23
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.19
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.12
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.08
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.03
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.0
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.94
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.79
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.78
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.76
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.7
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.7
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.68
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.5
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.47
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.39
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.37
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.37
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.35
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.22
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.2
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.89
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.81
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.65
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.65
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	94.4
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	94.4
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.09
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.01
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	93.95
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.89
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.89
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.88
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.87
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.87
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.85
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.81
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.77
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.72
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.37
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.35
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.21
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.1
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.08
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	93.04
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.01
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.96
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	92.94
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	92.75
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.73
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.7
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.53
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	92.5
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	92.49
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.48
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	92.42
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.32
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.23
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.1
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.06
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.03
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.02
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.94
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	91.9
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.8
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	91.75
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	91.69
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	91.62
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.6
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	91.52
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.19
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	91.19
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	91.17
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.16
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	91.15
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.12
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.08
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	90.92
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.74
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.74
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	90.57
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.54
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.42
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	90.26
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.1
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.06
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	89.8
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	89.69
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	89.59
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	89.41
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.38
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	89.32
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.98
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	88.97
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	88.96
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	88.88
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.81
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	88.65
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	88.46
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.38
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.03
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	87.99
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	87.92
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	87.73
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	87.73
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.68
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.64
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	87.59
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	87.52
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.5
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.29
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	87.23
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	86.83
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	86.56
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	86.29
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	86.04
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.86
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	85.59
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	85.17
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	85.1
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	84.75
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.59
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	84.33
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.32
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	84.03
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	83.74
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	83.62
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	83.04
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	82.8
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	82.58
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	82.56
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	82.05
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	82.03
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	81.88
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	81.85
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	81.48
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	81.47
d2eyqa5	211	Transcription-repair coupling factor, TRCF {Escher	81.13
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	81.12

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2e-49  Score=356.06  Aligned_cols=241  Identities=21%  Similarity=0.221  Sum_probs=213.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..++.++..++||++|+++++++++++.+  
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~--   79 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE--   79 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH--
Confidence            679999999999999999999999999999999999999999999998887788999999999999999999999999  


Q ss_pred             hccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          141 LDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                          ++++||+||||||+..   +..+++.++|+++|++|+.|+++++|+++|.|++++ .|+||++||.++.       
T Consensus        80 ----~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~-------  147 (258)
T d1iy8a_          80 ----RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGI-------  147 (258)
T ss_dssp             ----HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT-------
T ss_pred             ----HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhc-------
Confidence                5689999999999753   455789999999999999999999999999998876 7999999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-------HHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------FLSLM  290 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-------~~~~~  290 (369)
                                   .+.+...+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.+....       .....
T Consensus       148 -------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~  211 (258)
T d1iy8a_         148 -------------RGIGNQSGYAAAKHGVVGLTRNSAVEYG---RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAE  211 (258)
T ss_dssp             -------------SBCSSBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHH
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHH
Confidence                         7888999999999999999999999998   899999999999999999765321       11112


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  333 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~~g~~  333 (369)
                      ......|++|+.+|+|+|+.+++  |+++   ..+|+.+.+|+|..
T Consensus       212 ~~~~~~pl~R~~~p~dvA~~v~f--L~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         212 EFIQVNPSKRYGEAPEIAAVVAF--LLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHHH--HTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHH--HhCchhcCCcCceEEcCcchh
Confidence            23334578999999999999995  4444   56899999999875

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.5e-49  Score=353.15  Aligned_cols=243  Identities=19%  Similarity=0.228  Sum_probs=215.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++++++++++++++.+ 
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~~~-   84 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAIS-   84 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999999999999999876  45789999999999999999999999 


Q ss_pred             HhccCCCCCccEEEeccccccC-CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          140 LLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                           +++++|+||||||+..+ ..+.+.++|++++++|+.|+++++|.++|+|++++ .|+||++||.++.        
T Consensus        85 -----~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~--------  150 (255)
T d1fmca_          85 -----KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE--------  150 (255)
T ss_dssp             -----HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             -----HcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchh--------
Confidence                 56889999999998743 34789999999999999999999999999999887 7899999999988        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++..+|++||+|+.+|+|+|+.|++   ++||+||+|+||+|+|++.+...............|+
T Consensus       151 ------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl  215 (255)
T d1fmca_         151 ------------NKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI  215 (255)
T ss_dssp             ------------CCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS
T ss_pred             ------------ccccccccchhHHHHHHHHHHHHHHHhC---ccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCC
Confidence                        7888999999999999999999999998   8999999999999999998765433333444555788


Q ss_pred             hCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          299 GLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      +|+.+|+|+|+++++++.. +...+|+.+.+|+|...
T Consensus       216 ~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         216 RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCccc
Confidence            9999999999999965432 23579999999999753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-49  Score=352.92  Aligned_cols=238  Identities=21%  Similarity=0.281  Sum_probs=211.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      |++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.+...+.+|++++++++++++++.+ 
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   74 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRA-   74 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhc-
Confidence            578999999999999999999999999999999999999999988887     34678899999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           +++++|+||||||..  .+..+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++.       
T Consensus        75 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~-------  141 (243)
T d1q7ba_          75 -----EFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGT-------  141 (243)
T ss_dssp             -----HTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH-------
T ss_pred             -----ccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhc-------
Confidence                 678999999999986  3456889999999999999999999999999998876 7999999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++.++|++||+|+.+|+++|+.|++   ++||+||+|+||+++|+|.+....... .......|
T Consensus       142 -------------~~~~~~~~Y~asKaal~~lt~~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~-~~~~~~~p  204 (243)
T d1q7ba_         142 -------------MGNGGQANYAAAKAGLIGFSKSLAREVA---SRGITVNVVAPGFIETDMTRALSDDQR-AGILAQVP  204 (243)
T ss_dssp             -------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSCHHHH-HHHHTTCT
T ss_pred             -------------CCCCCCHHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecceEechhhhhhhhhHH-HHHHhcCC
Confidence                         7788899999999999999999999998   899999999999999999887654332 23344568


Q ss_pred             hhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      ++|+.+|+|+|+.+++++.. +...+|+.+.+++|..
T Consensus       205 l~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         205 AGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeE
Confidence            89999999999999965532 2357899999998864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.7e-49  Score=353.86  Aligned_cols=246  Identities=23%  Similarity=0.245  Sum_probs=189.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++..+.||++++++++++++++.+
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999999776  45799999999999999999999988


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                      .+     .+++|+||||||+.  .+..+++.++|++++++|+.|+++++|+++|+|++++ .|+||++||..+.      
T Consensus        82 ~~-----~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~------  149 (259)
T d1xq1a_          82 MF-----GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGV------  149 (259)
T ss_dssp             HH-----TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-----------
T ss_pred             Hh-----CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccc------
Confidence            43     26899999999986  4556889999999999999999999999999999876 7999999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++..+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.+...............
T Consensus       150 --------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~  212 (259)
T d1xq1a_         150 --------------VSASVGSIYSATKGALNQLARNLACEWA---SDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK  212 (259)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEECCSCC--------------------
T ss_pred             --------------ccccccccccccccchhhhhHHHHHHhc---ccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCC
Confidence                          7778889999999999999999999998   89999999999999999988765444344445567


Q ss_pred             HhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017580          297 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~  335 (369)
                      |++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..+.
T Consensus       213 pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s~~  252 (259)
T d1xq1a_         213 PLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTVN  252 (259)
T ss_dssp             -----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEET
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEECC
Confidence            899999999999999954321 125689999999997653

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1e-48  Score=350.10  Aligned_cols=244  Identities=24%  Similarity=0.335  Sum_probs=212.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++++++++++++++.+ 
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~-   79 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE-   79 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            5889999999999999999999999999999999999999999998887665 46789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ++++||+||||||+.  .+..+++.++|++++++|+.++++++|+++|+|++++ .|+||+++|..+.       
T Consensus        80 -----~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~-------  146 (251)
T d1vl8a_          80 -----KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVE-------  146 (251)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhc-------
Confidence                 568999999999986  4556889999999999999999999999999999887 7999999997764       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~  296 (369)
                                  ..+.++..+|++||+|+.+|+++|+.|++   ++||+||+|+||+|+|+|.+.... ...........
T Consensus       147 ------------~~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  211 (251)
T d1vl8a_         147 ------------EVTMPNISAYAASKGGVASLTKALAKEWG---RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI  211 (251)
T ss_dssp             ------------CCCSSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTC
T ss_pred             ------------cccCccccchHHHHHhHHHHHHHHHHHhc---ccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcC
Confidence                        14667788999999999999999999998   899999999999999999876533 22233444556


Q ss_pred             HhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      |++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..
T Consensus       212 pl~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         212 PLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence            889999999999999954432 1256899999998864

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1e-48  Score=350.28  Aligned_cols=241  Identities=22%  Similarity=0.300  Sum_probs=210.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .++++|++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++..+++|++|+++++++++++.+
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999999999765  45789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            +++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|++++ .|+||++||.++.      
T Consensus        84 ------~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~------  150 (251)
T d2c07a1          84 ------EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGL------  150 (251)
T ss_dssp             ------HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH------
T ss_pred             ------hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhc------
Confidence                  679999999999986  3456789999999999999999999999999999887 7999999999998      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.++..+|++||+|+.+|+|+|++|++   +.|||||+|+||+|+|+|.+..+... ........
T Consensus       151 --------------~~~~~~~~Y~asKaal~~ltr~lA~el~---~~gIrVN~V~PG~v~T~~~~~~~~~~-~~~~~~~~  212 (251)
T d2c07a1         151 --------------TGNVGQANYSSSKAGVIGFTKSLAKELA---SRNITVNAIAPGFISSDMTDKISEQI-KKNIISNI  212 (251)
T ss_dssp             --------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCC-----CCHHH-HHHHHTTC
T ss_pred             --------------CCCCCCHHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEccCCEecccccccCHHH-HHHHHhcC
Confidence                          7788899999999999999999999998   89999999999999999988765432 22334446


Q ss_pred             HhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017580          297 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  332 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~  332 (369)
                      |++|+.+|+|+|+.+++++.. +...+|+.+.+|+|.
T Consensus       213 pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         213 PAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCc
Confidence            889999999999999965532 235689999999884

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.6e-48  Score=348.97  Aligned_cols=241  Identities=25%  Similarity=0.336  Sum_probs=212.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..   +.++.++++|++|+++++++++++.+  
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~--   78 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEK--   78 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHH--
Confidence            7899999999999999999999999999999999999999998888753   45789999999999999999999998  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          ++++||+||||||+.  .+..+++.++|+++|++|+.++++++++++|+|++++.+|+||++||.++.        
T Consensus        79 ----~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~--------  146 (251)
T d1zk4a1          79 ----AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF--------  146 (251)
T ss_dssp             ----HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT--------
T ss_pred             ----HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee--------
Confidence                568999999999986  456788999999999999999999999999999988745699999999988        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHH--hCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN--LGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e--l~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                  .+.+...+|++||+|+.+|++++++|  ++   ++||+||+|+||+|+|+|.+..+............
T Consensus       147 ------------~~~~~~~~Y~asKaal~~lt~~lA~e~~l~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  211 (251)
T d1zk4a1         147 ------------VGDPSLGAYNASKGAVRIMSKSAALDCALK---DYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT  211 (251)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHT---TCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTC
T ss_pred             ------------ccCCCchhHHHHHHHHhcchHHHHHHHhcC---CCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCC
Confidence                        77888999999999999999999998  55   78999999999999999988776544444444456


Q ss_pred             HhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      |++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..
T Consensus       212 pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         212 PMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcccc
Confidence            889999999999999965432 2356899999998864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.8e-48  Score=350.27  Aligned_cols=248  Identities=20%  Similarity=0.295  Sum_probs=215.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      |++||+++||||++|||+++|++|+++|++|++++|+. +.++++.+++++.  +.++..+++|++|+++++++++++.+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999986 4678888888765  56889999999999999999999998


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            ++++||+||||||+..  +..+++.++|++++++|+.|+++++++++|+|++++.+++||++||.++.      
T Consensus        82 ------~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~------  149 (261)
T d1geea_          82 ------EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK------  149 (261)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------
T ss_pred             ------HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc------
Confidence                  5689999999999863  45678999999999999999999999999999887745679999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~  295 (369)
                                    .+.+...+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|++...... ..........
T Consensus       150 --------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~  212 (261)
T d1geea_         150 --------------IPWPLFVHYAASKGGMKLMTETLALEYA---PKGIRVNNIGPGAINTPINAEKFADPEQRADVESM  212 (261)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT
T ss_pred             --------------ccCccccccccCCccchhhHHHHHHHhh---hhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhc
Confidence                          7888999999999999999999999998   899999999999999999866432 2222334445


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccCCc
Q 017580          296 KLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSA  338 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~~~~  338 (369)
                      .|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..+.++.
T Consensus       213 ~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl~p~~  256 (261)
T d1geea_         213 IPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCGGG
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeCCCCC
Confidence            6889999999999999965432 235799999999999876543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=4.8e-48  Score=347.44  Aligned_cols=245  Identities=22%  Similarity=0.293  Sum_probs=213.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999999776  56889999999999999999999987


Q ss_pred             HHhccCCCC-CccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          139 WLLDSDMHS-SIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       139 ~~~~~~~~~-~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                            +++ ++|++|||||+.  .+..+.+.++|++++++|+.+++++++.++|+|++++ .|+||++||..+.     
T Consensus        82 ------~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~-----  149 (259)
T d2ae2a_          82 ------HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGA-----  149 (259)
T ss_dssp             ------HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGT-----
T ss_pred             ------HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccc-----
Confidence                  444 799999999986  3456889999999999999999999999999999887 7999999999988     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----HHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----LSLMA  291 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~----~~~~~  291 (369)
                                     .+.++...|++||+|+.+|+|+|++|++   +.||+||+|+||+|+|+|.+.....    .....
T Consensus       150 ---------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  211 (259)
T d2ae2a_         150 ---------------LAVPYEAVYGATKGAMDQLTRCLAFEWA---KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNK  211 (259)
T ss_dssp             ---------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHH
T ss_pred             ---------------cccccccchHHHHHHHHHHHHHHHHHhC---cCceEEEEeeeCcccCHHHHhhhhchhhHHHHHH
Confidence                           7788899999999999999999999998   8899999999999999997654221    11222


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~  335 (369)
                      .....|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|....
T Consensus       212 ~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         212 LIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMAN  256 (259)
T ss_dssp             HHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeEee
Confidence            33456889999999999999965532 235789999999987653

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2.7e-48  Score=349.63  Aligned_cols=242  Identities=24%  Similarity=0.263  Sum_probs=204.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc-chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.+.+ +.++.++++|++|+++++++++++.+ 
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~-   79 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVR-   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHH-
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            6799999999999999999999999999999999974 66788888876655 56899999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ++++||+||||||+.  .+..+.+.++|+++|++|+.++++++++++|+|++++ .|+||++||.++.       
T Consensus        80 -----~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~-------  146 (260)
T d1x1ta1          80 -----QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGL-------  146 (260)
T ss_dssp             -----HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccce-------
Confidence                 568999999999986  3456789999999999999999999999999999876 7999999999998       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH----------
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL----------  287 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~----------  287 (369)
                                   .+.++..+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.+......          
T Consensus       147 -------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  210 (260)
T d1x1ta1         147 -------------VASANKSAYVAAKHGVVGFTKVTALETA---GQGITANAICPGWVRTPLVEKQISALAEKNGVDQET  210 (260)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCC--------------------
T ss_pred             -------------eccCCcchhhhhhhhHHHhHHHHHHHhc---hhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHH
Confidence                         7888999999999999999999999998   89999999999999999986542210          


Q ss_pred             -HHHHHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          288 -SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       288 -~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                       .........|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..
T Consensus       211 ~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         211 AARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             ----CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchh
Confidence             011134456889999999999999965532 2367899999998854

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.4e-48  Score=347.22  Aligned_cols=238  Identities=22%  Similarity=0.278  Sum_probs=209.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+  
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~--   75 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLD--   75 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHH--
Confidence            78999999999999999999999999999999999999999888877     56789999999999999999999998  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          ++++||+||||||+.  .+..+++.++|++.+++|+.|+++++++++|.|.+++..|+||++||.++.        
T Consensus        76 ----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~--------  143 (256)
T d1k2wa_          76 ----RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR--------  143 (256)
T ss_dssp             ----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT--------
T ss_pred             ----HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc--------
Confidence                568999999999986  455688999999999999999999999999987655446999999999988        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----------HH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----------LS  288 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~----------~~  288 (369)
                                  .+.+...+|++||+|+.+|+++|+.|++   +.|||||+|+||+++|++.+.....          ..
T Consensus       144 ------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~  208 (256)
T d1k2wa_         144 ------------RGEALVGVYCATKAAVISLTQSAGLNLI---RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEK  208 (256)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHH
T ss_pred             ------------cccccccchhhhhhHHHHHHHHHHHHhc---ccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHH
Confidence                        7888999999999999999999999998   8999999999999999997654321          12


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  334 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~~g~~~  334 (369)
                      ........|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|..+
T Consensus       209 ~~~~~~~~PlgR~~~p~evA~~v~--fL~S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         209 KRQVGAAVPFGRMGRAEDLTGMAI--FLATPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             HHHHHHHSTTSSCBCHHHHHHHHH--HTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhCCccCceEEECcchhh
Confidence            223444568899999999999999  55554   468999999998653

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.9e-48  Score=345.08  Aligned_cols=233  Identities=21%  Similarity=0.286  Sum_probs=209.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      |+||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++|+++++++++++.+  
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~--   76 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVT--   76 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHH--
Confidence            78999999999999999999999999999999999999998888777     34688999999999999999999998  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|+||||||+.  .+..+++.++|+++|++|+.|+++++|.++|.|++++ .|+||++||.++.        
T Consensus        77 ----~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~--------  143 (244)
T d1nffa_          77 ----AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGL--------  143 (244)
T ss_dssp             ----HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             ----HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccc--------
Confidence                568899999999986  4567889999999999999999999999999999886 7999999999998        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.+...+|++||+|+.+|+|+|++|++   +.||+||+|+||+|+|+|.+..+...      ...|+
T Consensus       144 ------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~------~~~pl  202 (244)
T d1nffa_         144 ------------AGTVACHGYTATKFAVRGLTKSTALELG---PSGIRVNSIHPGLVKTPMTDWVPEDI------FQTAL  202 (244)
T ss_dssp             ------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSGGGTTSCTTC------SCCSS
T ss_pred             ------------cccccccchhhHHHHHHHHHHHHHHHhc---ccCEEEEEEeeCCccChhHhhhhHHH------Hhccc
Confidence                        7888899999999999999999999998   89999999999999999987655432      23578


Q ss_pred             hCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          299 GLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      +|+.+|+|+|+.+++++.. +...+|+.+.+|+|...
T Consensus       203 ~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         203 GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCeec
Confidence            8999999999999965542 23578999999998865

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=4e-48  Score=347.91  Aligned_cols=239  Identities=24%  Similarity=0.272  Sum_probs=207.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++|+++++++++++.+   
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~---   75 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVE---   75 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH---
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH---
Confidence            3899999999999999999999999999999999999999999999765  45789999999999999999999998   


Q ss_pred             ccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhh--hcCCCCCeEEEEcCCcccccccccC
Q 017580          142 DSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~--~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                         ++++||+||||||+.  .+..+++.++|++++++|+.|+++++|+++|+|  ++++ .|+||++||..+.       
T Consensus        76 ---~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~-------  144 (257)
T d2rhca1          76 ---RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGK-------  144 (257)
T ss_dssp             ---HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGT-------
T ss_pred             ---HhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Ccccccccccccc-------
Confidence               679999999999986  445688999999999999999999999999974  4444 6899999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FL  287 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----------~~  287 (369)
                                   .+.+...+|++||+|+.+|+|+|+.|++   +.|||||+|+||+|+|+|.+....          ..
T Consensus       145 -------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e  208 (257)
T d2rhca1         145 -------------QGVVHAAPYSASKHGVVGFTKALGLELA---RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEE  208 (257)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHH
T ss_pred             -------------cccccchhHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHH
Confidence                         7888999999999999999999999998   889999999999999999765422          11


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017580          288 SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  332 (369)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~  332 (369)
                      .........|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|.
T Consensus       209 ~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         209 AFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             HHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence            122334446789999999999999954421 235789999999885

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=5.1e-48  Score=346.73  Aligned_cols=241  Identities=24%  Similarity=0.317  Sum_probs=210.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +|+||||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.+++||++|+++++++++++.+    
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~----   74 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARK----   74 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH----
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH----
Confidence            378999999999999999999999999999999999999999999876  45789999999999999999999998    


Q ss_pred             cCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        ++++||+||||||+.  .+..++++++|++++++|+.|+++++|+++|+|.+++..++||++||.++.          
T Consensus        75 --~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~----------  142 (255)
T d1gega_          75 --TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH----------  142 (255)
T ss_dssp             --HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----------
T ss_pred             --HhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc----------
Confidence              679999999999986  455688999999999999999999999999988776656899999999988          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH----------HH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS----------LM  290 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~----------~~  290 (369)
                                .+.+....|++||+|+.+|+++|+.|++   +.|||||+|+||+|+|+|.........          ..
T Consensus       143 ----------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  209 (255)
T d1gega_         143 ----------VGNPELAVYSSSKFAVRGLTQTAARDLA---PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTA  209 (255)
T ss_dssp             ----------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred             ----------ccCcccccchhCHHHHHhhHHHHHHHhh---hhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHH
Confidence                      7888999999999999999999999998   899999999999999999766433211          12


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      ......|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..+
T Consensus       210 ~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         210 EFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEEe
Confidence            233445789999999999999955432 12568999999998653

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-48  Score=345.26  Aligned_cols=238  Identities=20%  Similarity=0.259  Sum_probs=206.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++      .++.++.||++|+++++++++++.+ 
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~-   75 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIR-   75 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999998888776664      3578999999999999999999998 


Q ss_pred             HhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           ++++||+||||||+..   +..+++.++|++++++|+.|+++++++++|+|++++  |+||++||.++.      
T Consensus        76 -----~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~isS~~~~------  142 (250)
T d1ydea1          76 -----RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGA------  142 (250)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCHHHH------
T ss_pred             -----hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCccccccccc------
Confidence                 5689999999999753   345789999999999999999999999999998764  899999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMA  291 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-----~~~~~~  291 (369)
                                    .+.+...+|++||+|+.+|+++|++|++   +.|||||+|+||+|+|+|.++...     ......
T Consensus       143 --------------~~~~~~~~Y~asKaal~~lt~~lA~e~a---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  205 (250)
T d1ydea1         143 --------------IGQAQAVPYVATKGAVTAMTKALALDES---PYGVRVNCISPGNIWTPLWEELAALMPDPRASIRE  205 (250)
T ss_dssp             --------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHH
T ss_pred             --------------ccccCcchhHHHHhhHHHHHHHHHHHhc---ccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHH
Confidence                          7778899999999999999999999998   899999999999999999765421     122233


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      .....|++|+.+|+|+|+++++++..+...+|+.+.+|+|..+
T Consensus       206 ~~~~~pl~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         206 GMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhCccCCCcCCeEEECCCccc
Confidence            3444588999999999999997764444679999999988653

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=7.6e-48  Score=343.71  Aligned_cols=239  Identities=23%  Similarity=0.260  Sum_probs=194.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      |+||+++||||++|||+++|++|+++|++|++++|++.+  ++.+.+++.  +.++.++++|++|+++++++++++.+  
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~--   76 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIS--   76 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHH--
Confidence            689999999999999999999999999999999998763  233334333  56899999999999999999999998  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          ++++||+||||||+.  .+..+++.++|+++|++|+.|+++++|+++|.|++++ .|+||++||.++.        
T Consensus        77 ----~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~--------  143 (247)
T d2ew8a1          77 ----TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW--------  143 (247)
T ss_dssp             ----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG--------
T ss_pred             ----HcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhc--------
Confidence                568999999999986  3456889999999999999999999999999999886 7999999999988        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH-HHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-FTVLKL  297 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~  297 (369)
                                  .+.+...+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|++.+.......... .....|
T Consensus       144 ------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  208 (247)
T d2ew8a1         144 ------------LKIEAYTHYISTKAANIGFTRALASDLG---KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQA  208 (247)
T ss_dssp             ------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCC------------------CTTSS
T ss_pred             ------------ccCcccccchhhhccHHHHHHHHHHHhc---ccCeEEEEEeeCCCCCccccccccchhHHHHHHHhcc
Confidence                        7788899999999999999999999998   899999999999999999876433221111 112236


Q ss_pred             hhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          298 LGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      ++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..
T Consensus       209 l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         209 IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCEe
Confidence            78899999999999954332 1256899999998864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=7.5e-48  Score=346.49  Aligned_cols=240  Identities=22%  Similarity=0.262  Sum_probs=209.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++..++||++|+++++++++++.+ 
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~-   78 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVR-   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            378999999999999999999999999999999999999999999999775  56789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                           +++++|+||||||+.   .+..+++.++|++++++|+.++++++++++|.|++++ .|+||++||.++.      
T Consensus        79 -----~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~------  146 (260)
T d1zema1          79 -----DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGV------  146 (260)
T ss_dssp             -----HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------
T ss_pred             -----HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhc------
Confidence                 568999999999975   3456889999999999999999999999999998876 7999999999988      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----------
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----------  285 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-----------  285 (369)
                                    .+.+...+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|++..+...           
T Consensus       147 --------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~  209 (260)
T d1zema1         147 --------------KGPPNMAAYGTSKGAIIALTETAALDLA---PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYF  209 (260)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTS
T ss_pred             --------------cCCcchHHHHHHHHHHHHHHHHHHHHhh---hhCCEEEEeccCcccCcchhhcchhhhhhhccccc
Confidence                          7888999999999999999999999998   899999999999999998643211           


Q ss_pred             ----HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCC
Q 017580          286 ----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  331 (369)
Q Consensus       286 ----~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g  331 (369)
                          ...........|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|
T Consensus       210 ~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         210 STDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             CSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             ccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence                11122334446889999999999999955432 23568999888876

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=7.3e-48  Score=343.06  Aligned_cols=237  Identities=24%  Similarity=0.309  Sum_probs=208.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-CCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ++||||||++|||+++|++|+++|++|++.+ |+++.++++.+++++.  +.++.++++|++|+++++++++++.+    
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~----   75 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAID----   75 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHH----
Confidence            6899999999999999999999999999874 5777888888888765  56889999999999999999999999    


Q ss_pred             cCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          143 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                        +++++|+||||||+.  .+..+++.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++.          
T Consensus        76 --~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~----------  142 (244)
T d1edoa_          76 --AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGL----------  142 (244)
T ss_dssp             --HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH----------
T ss_pred             --HcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhc----------
Confidence              679999999999986  4456889999999999999999999999999998876 7999999999988          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhC
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  300 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  300 (369)
                                .+.++..+|++||+|+.+|+++|+.|++   +.|||||+|+||+++|+|.+....... .......|++|
T Consensus       143 ----------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrvN~I~PG~i~T~~~~~~~~~~~-~~~~~~~pl~R  208 (244)
T d1edoa_         143 ----------IGNIGQANYAAAKAGVIGFSKTAAREGA---SRNINVNVVCPGFIASDMTAKLGEDME-KKILGTIPLGR  208 (244)
T ss_dssp             ----------HCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCSHHHHTTCHHHH-HHHHTSCTTCS
T ss_pred             ----------CCCCCCHHHHHHHHHHHHChHHHHHHHh---hhCcEEEEEecceeccHHHHHhhHHHH-HHHHhcCCCCC
Confidence                      7788899999999999999999999998   899999999999999999887654322 22334468899


Q ss_pred             CCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCcc
Q 017580          301 LQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRT  333 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~~--~~sG~~~~~~~g~~  333 (369)
                      +.+|+|+|+.+++++++++  ..+|+.+.+|+|-.
T Consensus       209 ~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         209 TGQPENVAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             CBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCee
Confidence            9999999999997654433  57899999998853

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=3.7e-48  Score=346.47  Aligned_cols=240  Identities=21%  Similarity=0.214  Sum_probs=208.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      |++||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++++++++++++++.+ 
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   75 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYARE-   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHH-
Confidence            689999999999999999999999999999999999998888777665     45789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           +++++|+||||||+.  .+..+.+.++|++.+++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        76 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~-------  142 (254)
T d1hdca_          76 -----EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGL-------  142 (254)
T ss_dssp             -----HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhc-------
Confidence                 568999999999987  3456789999999999999999999999999999876 7999999999998       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++..+|++||+|+.+|+++|+.|++   +.|||||+|+||+|+|+|..+...... .......|
T Consensus       143 -------------~~~~~~~~Y~asKaal~~lt~~lA~e~a---~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~p  205 (254)
T d1hdca_         143 -------------MGLALTSSYGASKWGVRGLSKLAAVELG---TDRIRVNSVHPGMTYTPMTAETGIRQG-EGNYPNTP  205 (254)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHTCCCS-TTSCTTST
T ss_pred             -------------ccccchhhHHHHHHHHHHHHHHHHHHhC---CCceEEEEeeeCcccCccchhcCHHHH-HHHHhCCC
Confidence                         7788899999999999999999999998   899999999999999999765432111 11223357


Q ss_pred             hhCCC-CHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017580          298 LGLLQ-SPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 ~~~~~-~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~  335 (369)
                      ++|+. +|+|+|+.+++++.. +...+|+.+.+|+|...-
T Consensus       206 l~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t~g  245 (254)
T d1hdca_         206 MGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             TSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTS
T ss_pred             CCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCccCC
Confidence            78886 699999999965532 235789999999997654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.9e-47  Score=336.73  Aligned_cols=236  Identities=20%  Similarity=0.234  Sum_probs=203.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++       +.++++||++|+++++++++++.+ 
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~-   73 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA-   73 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH-
Confidence            378999999999999999999999999999999999998888776554       457899999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ++++||+||||||+.  .+..+++.++|++++++|+.|+++++|+++|.|++++ .++|+++||. +.       
T Consensus        74 -----~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~-~~-------  139 (242)
T d1ulsa_          74 -----HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASR-VY-------  139 (242)
T ss_dssp             -----HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCG-GG-------
T ss_pred             -----hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeeccc-cc-------
Confidence                 568899999999987  3456889999999999999999999999999999876 6777777774 44       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++..+|++||+|+.+|+++|++|++   ++|||||+|+||+|+|++.+..+.... .......|
T Consensus       140 -------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~p  202 (242)
T d1ulsa_         140 -------------LGNLGQANYAASMAGVVGLTRTLALELG---RWGIRVNTLAPGFIETRMTAKVPEKVR-EKAIAATP  202 (242)
T ss_dssp             -------------GCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTTSSSCHHHH-HHHHHTCT
T ss_pred             -------------cCCCCCcchHHHHHHHHHHHHHHHHHHh---hhCcEEEEEeeCcccChhhhcCCHHHH-HHHHhcCC
Confidence                         5667888999999999999999999998   889999999999999999987755332 33445568


Q ss_pred             hhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          298 LGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      ++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..+
T Consensus       203 l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         203 LGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCccC
Confidence            89999999999999965432 23568999999998754

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.9e-47  Score=338.33  Aligned_cols=235  Identities=24%  Similarity=0.250  Sum_probs=200.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||+||||||++|||+++|++|+++|++|++++|+++..+ +.+++       ...++++|++|+++++++++++.+  
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~--   72 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-------GGAFFQVDLEDERERVRFVEEAAY--   72 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-------TCEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-------CCeEEEEeCCCHHHHHHHHHHHHH--
Confidence            68999999999999999999999999999999999987543 33333       235789999999999999999998  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .+++||+||||||+.  .+..+++.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++.        
T Consensus        73 ----~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~--------  139 (248)
T d2d1ya1          73 ----ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGL--------  139 (248)
T ss_dssp             ----HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGT--------
T ss_pred             ----hcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-ccccccccccccc--------
Confidence                568999999999986  4567889999999999999999999999999999887 7999999999998        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----H-HHHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----F-LSLMAFT  293 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----~-~~~~~~~  293 (369)
                                  .+.+...+|++||+|+.+|+++|++|++   +.||+||+|+||+|+|++.++...    . .......
T Consensus       140 ------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~  204 (248)
T d2d1ya1         140 ------------FAEQENAAYNASKGGLVNLTRSLALDLA---PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE  204 (248)
T ss_dssp             ------------SBCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHC--------CHHHH
T ss_pred             ------------ccccccchhHHHHHHHHHHHHHHHHHhh---hhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHH
Confidence                        7888999999999999999999999998   899999999999999998765311    1 1112233


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      ...|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..
T Consensus       205 ~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         205 DLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence            445788999999999999965432 2357899999998864

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.2e-47  Score=336.50  Aligned_cols=229  Identities=20%  Similarity=0.253  Sum_probs=195.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.             ..++..+++|++|+++++++++++.+ 
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~-   69 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEE-   69 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHH-
Confidence            5789999999999999999999999999999999998764             23567899999999999999999999 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           +++++|+||||||+.  .+..+.+.++|++++++|+.++++++|.++|+|++++ .|+||++||.++.       
T Consensus        70 -----~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~-------  136 (237)
T d1uzma1          70 -----HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGL-------  136 (237)
T ss_dssp             -----HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC--------
T ss_pred             -----hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhc-------
Confidence                 568899999999986  4556889999999999999999999999999999987 7899999999998       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++..+|++||+|+.+|+++|+.|++   ++||+||+|+||+|+|+|.+..+.... .......|
T Consensus       137 -------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~p  199 (237)
T d1uzma1         137 -------------WGIGNQANYAASKAGVIGMARSIARELS---KANVTANVVAPGYIDTDMTRALDERIQ-QGALQFIP  199 (237)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHSCHHHH-HHHGGGCT
T ss_pred             -------------cCCcccHHHHHHHHHHHHHHHHHHhhhh---cCCceeeeeeeCcCCChhhhccCHHHH-HHHHhcCC
Confidence                         7778899999999999999999999998   899999999999999999887654332 23344568


Q ss_pred             hhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017580          298 LGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  332 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~  332 (369)
                      ++|+.+|||+|+.+++++.. +...+|+.+.+|+|.
T Consensus       200 l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         200 AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence            89999999999999965532 235789999999884

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.5e-46  Score=338.97  Aligned_cols=243  Identities=21%  Similarity=0.295  Sum_probs=201.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc-CCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ ...++.++++|++++++++++++++.+ 
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~-   81 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG-   81 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            789999999999999999999999999999999999999999999998764 345799999999999999999999998 


Q ss_pred             HhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc-ccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH-RNV  212 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~-~~~  212 (369)
                           +++++|+||||||+..      +..+.+.+.|+++|++|+.|+++++++++|+|++++  |++|+++|..+ .  
T Consensus        82 -----~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~--  152 (264)
T d1spxa_          82 -----KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGL--  152 (264)
T ss_dssp             -----HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSS--
T ss_pred             -----HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--Ccceeeeeecccc--
Confidence                 5689999999999853      234568899999999999999999999999998775  77777777654 4  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH------
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF------  286 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~------  286 (369)
                                        .+.+....|++||+|+.+|+++|++|++   +.|||||+|+||+|+|+|.+.....      
T Consensus       153 ------------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~  211 (264)
T d1spxa_         153 ------------------HATPDFPYYSIAKAAIDQYTRNTAIDLI---QHGIRVNSISPGLVATGFGSAMGMPEETSKK  211 (264)
T ss_dssp             ------------------SCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCCCC-------------
T ss_pred             ------------------ccCCCchhhhhhhhhHHHHHHHHHHHhc---ccCeEEEEEeeCCCCCcchhccCCcHHHHHH
Confidence                              6778889999999999999999999998   8999999999999999997654211      


Q ss_pred             --HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCccc
Q 017580          287 --LSLMAFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       287 --~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~--~~~~sG~~~~~~~g~~~  334 (369)
                        ..........|++|+.+|+|+|+++++++..  +...+|+.+.+|+|..+
T Consensus       212 ~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         212 FYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             -HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence              1122234456889999999999999965542  23579999999998754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.9e-46  Score=339.78  Aligned_cols=252  Identities=20%  Similarity=0.224  Sum_probs=213.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+. ..++.++.+|++++++++++++++.+ 
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA-   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH-
Confidence            6799999999999999999999999999999999999999999999987643 35799999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccccC--C--CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILAT--S--SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~--~--~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                           ++++||++|||||....  .  .+.+.+.|++++++|+.++++++|+++|.|++++ .|+|+++||.++.     
T Consensus        81 -----~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~-----  149 (274)
T d1xhla_          81 -----KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP-----  149 (274)
T ss_dssp             -----HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS-----
T ss_pred             -----HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhcc-----
Confidence                 56899999999997522  2  3457899999999999999999999999999876 7889888888877     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH----HHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL----SLMA  291 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~----~~~~  291 (369)
                                     .+.++..+|++||+|+.+|+|+|+.|++   +.|||||+|+||+|+|++........    ....
T Consensus       150 ---------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  211 (274)
T d1xhla_         150 ---------------QAHSGYPYYACAKAALDQYTRCTAIDLI---QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYS  211 (274)
T ss_dssp             ---------------SCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHH
T ss_pred             ---------------ccCCCCceehhhhhHHHHHHHHHHHHHh---HhCCceeeeccCCCcCchhhhhcccchhhHHHHH
Confidence                           7778889999999999999999999998   89999999999999999976542111    1111


Q ss_pred             H----HHHHHhhCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCccccCCcccCC
Q 017580          292 F----TVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVNSSALSFN  342 (369)
Q Consensus       292 ~----~~~~~~~~~~~~~e~A~~v~~~~l~--~~~~sG~~~~~~~g~~~~~~~~~~d  342 (369)
                      .    ....|++|+.+|+|+|+.+++++..  +...+|+.+.+|+|..+...-...|
T Consensus       212 ~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~~g~~~~~  268 (274)
T d1xhla_         212 FIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHD  268 (274)
T ss_dssp             HHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSC
T ss_pred             HHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHhcCCCccc
Confidence            1    1224789999999999999966531  3368999999999988764443444

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-46  Score=333.89  Aligned_cols=235  Identities=25%  Similarity=0.308  Sum_probs=202.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      |++||++|||||++|||+++|++|+++|++|++++|++++++++.+++      ..+..+.+|++|+++++++++     
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~-----   70 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG-----   70 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH-----
Confidence            588999999999999999999999999999999999998888777664      257789999999999877654     


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ++++||+||||||+.  .+..+++.++|++.+++|+.++++++|.++|.|.+++.+|+||++||.++.       
T Consensus        71 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-------  138 (242)
T d1cyda_          71 -----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH-------  138 (242)
T ss_dssp             -----TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------
T ss_pred             -----HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc-------
Confidence                 578999999999986  455688999999999999999999999999987655446999999999888       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~  296 (369)
                                   .+.+...+|++||+|+.+|+|+|+.|++   +.|||||+|+||+++|++.+.... ...........
T Consensus       139 -------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  202 (242)
T d1cyda_         139 -------------VTFPNLITYSSTKGAMTMLTKAMAMELG---PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH  202 (242)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS
T ss_pred             -------------ccCCccccccchHHHHHHHHHHHHHHhC---ccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcC
Confidence                         7788899999999999999999999998   899999999999999999876533 22333445567


Q ss_pred             HhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      |++|+.+|||+|+.+++++.. +...+|+.+.+|+|..
T Consensus       203 pl~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         203 PLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcchh
Confidence            899999999999999965432 2356899999998854

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.6e-46  Score=340.08  Aligned_cols=250  Identities=22%  Similarity=0.259  Sum_probs=209.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc-CCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .+.++.+++||++++++++++++++.+ 
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~-   81 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK-   81 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            789999999999999999999999999999999999999999999998764 345799999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccccCC------CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC-ccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILATS------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF-THRNV  212 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~-~~~~~  212 (369)
                           +++++|+||||||+..+.      .+.+.+.|++++++|+.++++++++++|+|++++  |++|+++|. ++.  
T Consensus        82 -----~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~Ss~a~~--  152 (272)
T d1xkqa_          82 -----QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGP--  152 (272)
T ss_dssp             -----HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSS--
T ss_pred             -----HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC--Cccccccchhccc--
Confidence                 568999999999986432      2456778999999999999999999999998765  667666664 555  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH--
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM--  290 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~--  290 (369)
                                        .+.++...|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|...........  
T Consensus       153 ------------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~  211 (272)
T d1xkqa_         153 ------------------QAQPDFLYYAIAKAALDQYTRSTAIDLA---KFGIRVNSVSPGMVETGFTNAMGMPDQASQK  211 (272)
T ss_dssp             ------------------SCCCSSHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCBCSSHHHHTTCCHHHHHH
T ss_pred             ------------------cCCCCcchhhhHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCCcchhhhccCCchHHHHH
Confidence                              7788899999999999999999999998   89999999999999999986542211111  


Q ss_pred             ------HHHHHHHhhCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCccccCCcccC
Q 017580          291 ------AFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVNSSALSF  341 (369)
Q Consensus       291 ------~~~~~~~~~~~~~~~e~A~~v~~~~l~--~~~~sG~~~~~~~g~~~~~~~~~~  341 (369)
                            ......|++|+.+|+|+|+.+++++..  +...+|+.+.+|+|..+......+
T Consensus       212 ~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~~g~~~~  270 (272)
T d1xkqa_         212 FYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLVMGTQAH  270 (272)
T ss_dssp             HHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCBGGGGS
T ss_pred             HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHhcCCCcc
Confidence                  111224788999999999999965532  235799999999998875444333

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-46  Score=334.47  Aligned_cols=239  Identities=20%  Similarity=0.197  Sum_probs=209.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++.++.++++|++|+++++++++++.+  
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--   78 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD--   78 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHH--
Confidence            369999999999999999999999999999999999999999999998877778999999999999999999999998  


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          +++++|+||||||+..      .+.|++++++|+.+++++++.++|+|++++  ..|+||++||.++.        
T Consensus        79 ----~~G~iDilVnnAg~~~------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~--------  140 (254)
T d2gdza1          79 ----HFGRLDILVNNAGVNN------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL--------  140 (254)
T ss_dssp             ----HHSCCCEEEECCCCCC------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT--------
T ss_pred             ----HcCCcCeecccccccc------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc--------
Confidence                5689999999999853      356899999999999999999999998764  24899999999998        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHH--HHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-------HH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYE--LHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-------SL  289 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~--la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-------~~  289 (369)
                                  .+.+...+|++||+|+.+|+|+  |+.|++   +.|||||+|+||+|+|+|.+......       ..
T Consensus       141 ------------~~~~~~~~Y~asKaal~~ltrs~ala~e~~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  205 (254)
T d2gdza1         141 ------------MPVAQQPVYCASKHGIVGFTRSAALAANLM---NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYK  205 (254)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGH
T ss_pred             ------------cCCCCccchHHHHHHHHHHHHHHHHHHHhc---CCCEEEEEEEcCCCCChhhhhccccccccccHHHH
Confidence                        7888999999999999999997  788998   89999999999999999987653221       12


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      .......|++|+.+|+|+|+.+++++. ++..+|+.+.+++|..+.
T Consensus       206 ~~~~~~~p~~r~~~pedvA~~v~fL~s-~~~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         206 DHIKDMIKYYGILDPPLIANGLITLIE-DDALNGAIMKITTSKGIH  250 (254)
T ss_dssp             HHHHHHHHHHCCBCHHHHHHHHHHHHH-CTTCSSCEEEEETTTEEE
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHHc-CCCCCCCEEEECCCCeee
Confidence            234456788999999999999997664 345799999999987664

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=3.6e-46  Score=337.15  Aligned_cols=244  Identities=21%  Similarity=0.286  Sum_probs=206.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++..   ...+.+++||++|+++++++++++.+ 
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~-   78 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIA-   78 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            37899999999999999999999999999999999999999999988854   34678899999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccccC----CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                           .++++|+||||||+...    ..+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||..+.     
T Consensus        79 -----~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~-----  147 (268)
T d2bgka1          79 -----KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSF-----  147 (268)
T ss_dssp             -----HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGT-----
T ss_pred             -----HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCcccccccccc-----
Confidence                 56899999999998632    45778999999999999999999999999999876 7999999999887     


Q ss_pred             cCCCcccccccccccCCCch-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----HHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FLSLM  290 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~-~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----~~~~~  290 (369)
                                     .+.++ ...|++||+|+.+|+++|+.|++   +.|||||+|+||+|+|+|.++...    .....
T Consensus       148 ---------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~  209 (268)
T d2bgka1         148 ---------------TAGEGVSHVYTATKHAVLGLTTSLCTELG---EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEEL  209 (268)
T ss_dssp             ---------------CCCTTSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHH
T ss_pred             ---------------ccccccccccchhHHHHHhCHHHHHHHhC---hhCeEEEecCCCCccChHHhhhhcCCHHHHHHH
Confidence                           44333 45899999999999999999998   899999999999999999876422    11111


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccC
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNS  336 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~~  336 (369)
                      ......+++|+.+|||+|+.+++++.. +...+|+.+.+|+|.....
T Consensus       210 ~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~~  256 (268)
T d2bgka1         210 AHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTN  256 (268)
T ss_dssp             HHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHhccccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcccCC
Confidence            111223567899999999999965532 2357899999999986643

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7.5e-46  Score=332.68  Aligned_cols=244  Identities=22%  Similarity=0.327  Sum_probs=208.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +..++++.+|++++++++++++++.+.
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999998776  467889999999999999999999984


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                      +     .+++|+||||||..  .+..+++.++|++++++|+.++++++++++|.|++++ .|+||++||.++.       
T Consensus        81 ~-----~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~-------  147 (258)
T d1ae1a_          81 F-----DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGF-------  147 (258)
T ss_dssp             T-----TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGT-------
T ss_pred             h-----CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccc-------
Confidence            2     26899999999986  4556889999999999999999999999999999887 8999999999998       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAF  292 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-----~~~~~~~  292 (369)
                                   .+.+....|+++|+|+++|++.|++|++   +.|||||+|+||+++|+|.+....     .......
T Consensus       148 -------------~~~~~~~~Y~~sK~al~~lt~~lA~el~---~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  211 (258)
T d1ae1a_         148 -------------SALPSVSLYSASKGAINQMTKSLACEWA---KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNF  211 (258)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBC-------------CHHHHHHH
T ss_pred             -------------cccccchhHHHHHHHHHHHHHHHHHhcC---cCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHH
Confidence                         7889999999999999999999999998   899999999999999999766422     1222334


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      ....|++|+.+|+|+|+++++++.. +...+|+.+.+|+|...
T Consensus       212 ~~~~plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~  254 (258)
T d1ae1a_         212 IVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA  254 (258)
T ss_dssp             HHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCeec
Confidence            4556889999999999999965532 23569999999998765

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=7.3e-47  Score=338.35  Aligned_cols=240  Identities=20%  Similarity=0.174  Sum_probs=204.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.+..++++|++++++++++++++.+ 
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~-   76 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQR-   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHH-
Confidence            378999999999999999999999999999999999999999888887     55788999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           +++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|+|++++  |+||++||.++.       
T Consensus        77 -----~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--G~Iv~isS~~~~-------  142 (253)
T d1hxha_          77 -----RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSW-------  142 (253)
T ss_dssp             -----HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGT-------
T ss_pred             -----HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--Cceecccchhhh-------
Confidence                 568999999999986  4566889999999999999999999999999998654  999999999998       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hH---HHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SF---LSLMAFT  293 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~---~~~~~~~  293 (369)
                                   .+.+...+|++||+|+.+|++++++|++.+ ..+||||+|+||+|+|++.+... ..   .......
T Consensus       143 -------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~-g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  208 (253)
T d1hxha_         143 -------------LPIEQYAGYSASKAAVSALTRAAALSCRKQ-GYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP  208 (253)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBT
T ss_pred             -------------cCccccccccchhHHHHHHHHHHHHHHhhc-CCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCc
Confidence                         788899999999999999999999999711 25699999999999999875421 11   1111112


Q ss_pred             HHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          294 VLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       294 ~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      ...|++|+.+|||+|+.+++++.. +...+|+.+.+|+|-.
T Consensus       209 ~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         209 KLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             TTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred             cccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECccHh
Confidence            234567888999999999965432 2357899999998853

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=5.4e-46  Score=334.53  Aligned_cols=251  Identities=21%  Similarity=0.222  Sum_probs=212.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++++++++++++++.+ 
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~-   83 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDA-   83 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            6899999999999999999999999999999999999999999988887655 46789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           +++++|+||||||+.  .+..+++.++|++.+++|+.|++++++.++|+|.+++..|+|++++|..+........
T Consensus        84 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~  158 (260)
T d1h5qa_          84 -----DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  158 (260)
T ss_dssp             -----HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             -----HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc
Confidence                 679999999999986  3456889999999999999999999999999987655468899888877652211100


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                                   .+.++..+|++||+|+.+++|+|+.|++   +.|||||+|+||+|+|++....+.... .......|
T Consensus       159 -------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrvN~I~PG~i~T~~~~~~~~~~~-~~~~~~~p  221 (260)
T d1h5qa_         159 -------------NGSLTQVFYNSSKAACSNLVKGLAAEWA---SAGIRVNALSPGYVNTDQTAHMDKKIR-DHQASNIP  221 (260)
T ss_dssp             -------------TEECSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCGGGGGSCHHHH-HHHHHTCT
T ss_pred             -------------ccCccccchhhhhhhHHHHHHHHHHHhc---hhCeEEeecCCCcccCcchhccCHHHH-HHHHhcCC
Confidence                         2335678999999999999999999998   899999999999999999887654332 23445568


Q ss_pred             hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          298 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       298 ~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ++|+.+|+|+|+.+++++... ...+|+.+.+|+|..+
T Consensus       222 l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         222 LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             CCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCeec
Confidence            899999999999999554321 2568999999999754

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-46  Score=330.61  Aligned_cols=235  Identities=23%  Similarity=0.257  Sum_probs=200.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++      ..+..+.+|++|+++++++++     
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~-----   72 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG-----   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH-----
Confidence            478999999999999999999999999999999999999888877664      246789999999999877664     


Q ss_pred             HhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ++++||+||||||+.  .+..+.+.++|++.+++|+.+++++++.++|.|.+++..|+||++||.++.       
T Consensus        73 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~-------  140 (244)
T d1pr9a_          73 -----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ-------  140 (244)
T ss_dssp             -----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------
T ss_pred             -----HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc-------
Confidence                 568999999999986  455688999999999999999999999999976544337999999999988       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVLK  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~  296 (369)
                                   .+.+...+|++||+|+.+|+++|+.|++   +.|||||+|+||+|+|++.+.... ...........
T Consensus       141 -------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~  204 (244)
T d1pr9a_         141 -------------RAVTNHSVYCSTKGALDMLTKVMALELG---PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI  204 (244)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTC
T ss_pred             -------------ccccchhhhhhhHHHHHHHHHHHHHHhC---CCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcC
Confidence                         7788899999999999999999999998   889999999999999999876533 22233344456


Q ss_pred             HhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          297 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       297 ~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      |++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..
T Consensus       205 pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         205 PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECccHh
Confidence            889999999999999965432 1357899999998853

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=8.5e-46  Score=328.83  Aligned_cols=214  Identities=28%  Similarity=0.397  Sum_probs=194.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCE-------EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFH-------VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~-------Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ++||||||++|||+++|++|+++|++       |++++|++++++++.+++++.  +.++.++.||++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            57999999999999999999999997       999999999999999999876  568899999999999999999999


Q ss_pred             HHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  214 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~  214 (369)
                      .+      +++++|+||||||+.  .+..+.+.++|+++|++|+.|+++++++++|+|++++ .|+||++||.++.    
T Consensus        80 ~~------~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~----  148 (240)
T d2bd0a1          80 VE------RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAAT----  148 (240)
T ss_dssp             HH------HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT----
T ss_pred             HH------HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhc----
Confidence            98      679999999999986  4556789999999999999999999999999999876 7999999999998    


Q ss_pred             ccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017580          215 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  294 (369)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  294 (369)
                                      .+.++.+.|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.+..+....      
T Consensus       149 ----------------~~~~~~~~Y~asK~al~~lt~~la~el~---~~gIrvn~i~PG~v~T~~~~~~~~~~~------  203 (240)
T d2bd0a1         149 ----------------KAFRHSSIYCMSKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMWGKVDDEMQ------  203 (240)
T ss_dssp             ----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCSTTTCCCCSTTG------
T ss_pred             ----------------CCCCCChHHHHHHHHHHHHHHHHHHHhC---cCCeEEEEeeeCcccCchhhhcCHhhH------
Confidence                            7888999999999999999999999998   889999999999999999887654321      


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCCC
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                          .++.+|||+|+.+++++..+.
T Consensus       204 ----~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         204 ----ALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             ----GGSBCHHHHHHHHHHHHTSCT
T ss_pred             ----hcCCCHHHHHHHHHHHHcCCc
Confidence                356799999999997765543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-45  Score=329.47  Aligned_cols=242  Identities=23%  Similarity=0.316  Sum_probs=205.9

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      |.|..++||+||||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+.++.+++||+++++++++++++
T Consensus         3 ~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~   82 (257)
T d1xg5a_           3 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA   82 (257)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence            45667999999999999999999999999999999999999999999999999987778999999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNV  212 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~IV~vsS~~~~~~  212 (369)
                      +.+      ++++||+||||||..  .+..+.+.+.|++.+++|+.++++++++++|.|++++ .+|+||++||.++...
T Consensus        83 ~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~  156 (257)
T d1xg5a_          83 IRS------QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  156 (257)
T ss_dssp             HHH------HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHH------hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC
Confidence            999      568999999999986  4567889999999999999999999999999987654 3689999999988621


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHh--CCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL--GLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  290 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el--~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~  290 (369)
                                        .|.+....|++||+|+.+|+++|+.|+  +   +++|+||+|+||.++|++......... .
T Consensus       157 ------------------~p~~~~~~Y~~sKaal~~ltr~la~el~~~---~~~I~vn~i~PG~i~t~~~~~~~~~~~-~  214 (257)
T d1xg5a_         157 ------------------LPLSVTHFYSATKYAVTALTEGLRQELREA---QTHIRATCISPGVVETQFAFKLHDKDP-E  214 (257)
T ss_dssp             ------------------CSCGGGHHHHHHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEESCBCSSHHHHHTTTCH-H
T ss_pred             ------------------CCCcccHHHHHHHHHHHhCHHHHHHHHHhC---CCCEEEEEEeCCCCCChhhhhcChhhH-H
Confidence                              456677889999999999999999998  5   789999999999999999876543221 2


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccE
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVY  325 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~  325 (369)
                      ......|++|+.+|+|+|+++++++..+. ..+|+.
T Consensus       215 ~~~~~~~~~r~~~pedvA~~v~fL~s~~a~~itG~i  250 (257)
T d1xg5a_         215 KAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDI  250 (257)
T ss_dssp             HHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCChhcCeECCE
Confidence            23445678889999999999996654332 345654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-45  Score=336.29  Aligned_cols=267  Identities=18%  Similarity=0.199  Sum_probs=221.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc---CCCcEEEEEecCCChHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN---KDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~---~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      -.|+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+..   .+.++..++||++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            34899999999999999999999999999999999999999999999997643   256899999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +.+      .++++|+||||||+.  .+..+.+.+.|++++++|+.|+++++++++|.|++++ .|+||++||. +.   
T Consensus        88 ~~~------~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~-~~---  156 (297)
T d1yxma1          88 TLD------TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVP-TK---  156 (297)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCC-CT---
T ss_pred             HHH------HhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-cccccccccc-cc---
Confidence            998      558899999999976  4556889999999999999999999999999999887 7899998764 33   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---HHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---LSLM  290 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~---~~~~  290 (369)
                                       .+.+....|++||+|+.+|+++++.|++   +.||+||+|+||+|+|++..+....   ....
T Consensus       157 -----------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~  216 (297)
T d1yxma1         157 -----------------AGFPLAVHSGAARAGVYNLTKSLALEWA---CSGIRINCVAPGVIYSQTAVENYGSWGQSFFE  216 (297)
T ss_dssp             -----------------TCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT
T ss_pred             -----------------ccccccccchhHHHHHHHHHHHHHHHhc---ccCceEEEeeeCcCcCcchhhhccccCHHHHH
Confidence                             4567889999999999999999999998   8999999999999999987543211   1111


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccCC-----------cccCCHHHHHHHHHHHHHh
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSS-----------ALSFNSKLAGELWTTSCNL  356 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~~~-----------~~~~d~~~~~~lw~~~~~~  356 (369)
                      ......|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..+...           ....+.+..+++|+..++.
T Consensus       217 ~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (297)
T d1yxma1         217 GSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEK  294 (297)
T ss_dssp             TGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCBTTCCCCCCSCCCCCSSCCHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChhhhcCCCCCCCcccccccCCchHHHHHHhHhhHHh
Confidence            223345789999999999999955532 23579999999999865211           1123456777788877664

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-45  Score=327.29  Aligned_cols=222  Identities=23%  Similarity=0.330  Sum_probs=198.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.+++.+.||++|+++++++++++.
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999865  5689999999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  215 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~  215 (369)
                      +      +++++|++|||||+..  +..+.+.+.+++++++|+.|+++++++++|.|++++ .|+||++||.++.     
T Consensus        80 ~------~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~-----  147 (244)
T d1yb1a_          80 A------EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGH-----  147 (244)
T ss_dssp             H------HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-C-----
T ss_pred             H------HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhc-----
Confidence            8      6789999999999873  445678899999999999999999999999999887 7999999999998     


Q ss_pred             cCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017580          216 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  295 (369)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  295 (369)
                                     .+.+++++|++||+|+.+|+++|+.|++.....||+||+|+||+|+|+|.++..           
T Consensus       148 ---------------~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~-----------  201 (244)
T d1yb1a_         148 ---------------VSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS-----------  201 (244)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH-----------
T ss_pred             ---------------CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC-----------
Confidence                           888999999999999999999999998632347899999999999999987632           


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      .++.+..+|+++|+.+++.+....
T Consensus       202 ~~~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         202 TSLGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             ccccCCCCHHHHHHHHHHHHhcCC
Confidence            234467799999999998776654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.1e-45  Score=331.35  Aligned_cols=239  Identities=20%  Similarity=0.194  Sum_probs=202.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++     +.++..+.+|++++++++++++++.+ 
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~-   75 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA-   75 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH-
Confidence            378999999999999999999999999999999999999888877765     45789999999999999999999998 


Q ss_pred             HhccCCCCCccEEEeccccccCC-------CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~-------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                           +++++|++|||||+..+.       .+.+.+.|+++|++|+.|+++++|+++|.|++++  |+||+++|.++.  
T Consensus        76 -----~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~--  146 (276)
T d1bdba_          76 -----RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGF--  146 (276)
T ss_dssp             -----HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGT--
T ss_pred             -----HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhc--
Confidence                 568999999999986321       2344567999999999999999999999998765  899999999888  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH------
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF------  286 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~------  286 (369)
                                        .+.+...+|++||+|+.+|+|+|+.|++   + +||||+|+||+|+|+|.......      
T Consensus       147 ------------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~-~IrVN~I~PG~i~T~~~~~~~~~~~~~~~  204 (276)
T d1bdba_         147 ------------------YPNGGGPLYTAAKHAIVGLVRELAFELA---P-YVRVNGVGSGGINSDLRGPSSLGMGSKAI  204 (276)
T ss_dssp             ------------------STTSSCHHHHHHHHHHHHHHHHHHHHHT---T-TCEEEEEEECCCCSCCCCCGGGC------
T ss_pred             ------------------cCCCCCchHHHHHHHHHHHHHHHHHHhh---c-ceEEcccCCCCEecCcCCccchhhhhhcc
Confidence                              7788899999999999999999999997   5 49999999999999986543211      


Q ss_pred             ---HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCcccc
Q 017580          287 ---LSLMAFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       287 ---~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~--~~~~sG~~~~~~~g~~~~  335 (369)
                         ..........|++|+.+|+|+|+.+++++..  +...+|+.+.+|+|..+.
T Consensus       205 ~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         205 STVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             ---CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGGC
T ss_pred             CcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhhc
Confidence               1111223345789999999999999965542  236799999999998764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.3e-44  Score=322.82  Aligned_cols=242  Identities=21%  Similarity=0.223  Sum_probs=208.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH---CCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~---~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +|+||+++||||++|||+++|++|++   +|++|++++|++++++++.+++...+++.++.+++||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            58899999999999999999999996   799999999999999999999999888889999999999999999999998


Q ss_pred             HHHHhccCCCCCccEEEecccccc-----CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCC-CCeEEEEcCCccc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTSFTHR  210 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-~g~IV~vsS~~~~  210 (369)
                      .+....  .++.+|++|||||...     +..+.+.+.|+++|++|+.|+++++++++|+|+++++ .|+||++||.++.
T Consensus        83 ~~~~~~--~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~  160 (259)
T d1oaaa_          83 RELPRP--EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHSCCC--TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHhhhh--ccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence            763211  3568999999999753     2347789999999999999999999999999988752 4799999999998


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----H
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----F  286 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~----~  286 (369)
                                          .+.+++.+|++||+|+.+|+++|+.|     .+||+||+|+||+|+|+|.+....    .
T Consensus       161 --------------------~~~~~~~~Y~asKaal~~lt~~la~e-----~~gIrVn~v~PG~i~T~~~~~~~~~~~~~  215 (259)
T d1oaaa_         161 --------------------QPYKGWGLYCAGKAARDMLYQVLAAE-----EPSVRVLSYAPGPLDNDMQQLARETSKDP  215 (259)
T ss_dssp             --------------------SCCTTCHHHHHHHHHHHHHHHHHHHH-----CTTEEEEEEECCSBSSHHHHHHHHHCSCH
T ss_pred             --------------------CCCccchHHHHHHHHHHHHHHHHHhC-----CCCCEEEEEEcCCCCCHHHHHhhhcCCCH
Confidence                                88889999999999999999999998     368999999999999999765321    1


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeC
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFG  328 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~  328 (369)
                      ..........+.+++.+|+|+|+.+++++......+|+.+.+
T Consensus       216 ~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         216 ELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            222334455688899999999999998775555678887754

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2.7e-44  Score=319.42  Aligned_cols=235  Identities=23%  Similarity=0.286  Sum_probs=199.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+  
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~--   75 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALE--   75 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHH--
Confidence            68999999999999999999999999999999999998877666554     56889999999999999999999999  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++++|+||||||..  .+..+.+.+.|++++++|+.+++.+++.++|+|+++   +.|+++||.+.         
T Consensus        76 ----~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~---~~i~~~ss~a~---------  139 (241)
T d2a4ka1          76 ----EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG---GSLVLTGSVAG---------  139 (241)
T ss_dssp             ----HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT---CEEEEECCCTT---------
T ss_pred             ----HhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc---cceeecccccc---------
Confidence                558899999999986  455688999999999999999999999999998764   46777666554         


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++...|+++|+|+++|+++|++|++   +.||+||+|+||+++|++.+..+... ........|+
T Consensus       140 ------------~~~~~~~~Y~~sK~al~~lt~~lA~el~---~~gIrvN~I~PG~v~T~~~~~~~~~~-~~~~~~~~p~  203 (241)
T d2a4ka1         140 ------------LGAFGLAHYAAGKLGVVGLARTLALELA---RKGVRVNVLLPGLIQTPMTAGLPPWA-WEQEVGASPL  203 (241)
T ss_dssp             ------------CCHHHHHHHHHCSSHHHHHHHHHHHHHT---TTTCEEEEEEECSBCCGGGTTSCHHH-HHHHHHTSTT
T ss_pred             ------------ccccCccccchhhHHHHHHHHHHHHHHh---HhCCEEeeeccCcCCCHHHHhhhHhH-HHHHHhCCCC
Confidence                        4457889999999999999999999998   89999999999999999988765533 3334455788


Q ss_pred             hCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          299 GLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      +|+.+|+|+|+++++++.. +...+|+.+.+|+|..+
T Consensus       204 ~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         204 GRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSI  240 (241)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCccc
Confidence            9999999999999965532 23578999999998754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.9e-43  Score=317.35  Aligned_cols=240  Identities=18%  Similarity=0.186  Sum_probs=196.1

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +|+||++|||||+|  |||+++|++|+++|++|++++|+++..+++.+ +...  ..+..++++|++|+++++++++++.
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK-LAEA--LGGALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHH--TTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH-hhhc--cCcccccccccCCHHHHHHHHHHHH
Confidence            68999999999987  99999999999999999999999765555443 3333  3356789999999999999999999


Q ss_pred             HHHhccCCCCCccEEEecccccc------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      +      ++++||+||||||+..      +..+.+.++|+..+++|+.+++.+++.++|.|++   .|+||++||..+. 
T Consensus        82 ~------~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~-  151 (256)
T d1ulua_          82 E------AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASE-  151 (256)
T ss_dssp             H------HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGT-
T ss_pred             H------hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhc-
Confidence            8      5688999999999752      3456788999999999999999999999999975   4899999999988 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLM  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-~~~  290 (369)
                                         .+.++..+|++||+|+.+++|+++.|++   ++|||||+|+||+++|++.+..+... ...
T Consensus       152 -------------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~  209 (256)
T d1ulua_         152 -------------------KVVPKYNVMAIAKAALEASVRYLAYELG---PKGVRVNAISAGPVRTVAARSIPGFTKMYD  209 (256)
T ss_dssp             -------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCC----------CHHHHH
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCCEEeeeccceeeeccccchhhhHHHHH
Confidence                               7788899999999999999999999998   89999999999999999987754322 233


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ......|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+
T Consensus       210 ~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         210 RVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEeC
Confidence            4455568999999999999999554321 2568999999998654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=4.4e-44  Score=320.43  Aligned_cols=233  Identities=18%  Similarity=0.124  Sum_probs=199.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      |+|||||++|||+++|++|+++|++|++++|+.++++++..... .       +.++|++++++++++++++.+      
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~-------~~~~dv~~~~~~~~~~~~~~~------   67 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-T-------YPQLKPMSEQEPAELIEAVTS------   67 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-H-------CTTSEECCCCSHHHHHHHHHH------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-c-------EEEeccCCHHHHHHHHHHHHH------
Confidence            79999999999999999999999999999999988877654432 2       235899999999999999998      


Q ss_pred             CCCCccEEEeccccc---cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          145 MHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       145 ~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                      ++++||+||||||+.   .+..+.+.++|++.+++|+.++++++|+++|+|++++ .|+||++||.++.           
T Consensus        68 ~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~-----------  135 (252)
T d1zmta1          68 AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPF-----------  135 (252)
T ss_dssp             HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTT-----------
T ss_pred             HcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccc-----------
Confidence            568999999999975   3456789999999999999999999999999999876 7999999999988           


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-------HHHHHHHHH
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------FLSLMAFTV  294 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~  294 (369)
                               .+.+...+|++||+|+.+|+|+|++|++   ++|||||+|+||+|+|++......       .........
T Consensus       136 ---------~~~~~~~~Y~asKaal~~lt~~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~  203 (252)
T d1zmta1         136 ---------GPWKELSTYTSARAGACTLANALSKELG---EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK  203 (252)
T ss_dssp             ---------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH
T ss_pred             ---------cccccccccccccccHHHHHHHHHHHhc---ccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHh
Confidence                     7788899999999999999999999998   899999999999999999765421       112233445


Q ss_pred             HHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          295 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       295 ~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      ..|++|+.+|+|+|+.+++++... ...+|+.+.+|+|-.+-
T Consensus       204 ~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~~~  245 (252)
T d1zmta1         204 VTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFPMI  245 (252)
T ss_dssp             HSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCCCC
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCceeC
Confidence            568899999999999999554322 25689999999997653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.1e-44  Score=326.90  Aligned_cols=257  Identities=23%  Similarity=0.229  Sum_probs=209.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC---------cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS---------SHLLSETMADITSRNKDARLEAFQVDLSSFQSVL  130 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~---------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~  130 (369)
                      +++||++|||||++|||+++|++|+++|++|++++|+         .+.++++.+++...     .....+|+++.++++
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----GGKAVANYDSVEAGE   78 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----TCEEEEECCCGGGHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-----ccccccccchHHHHH
Confidence            5789999999999999999999999999999998765         44566666666543     345679999999999


Q ss_pred             HHHHHHHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          131 KFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       131 ~~~~~i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                      ++++++.+      .+++||+||||||+.  .++.+++.++|++++++|+.|+++++|+++|+|++++ .|+||++||.+
T Consensus        79 ~~v~~~~~------~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~  151 (302)
T d1gz6a_          79 KLVKTALD------TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASAS  151 (302)
T ss_dssp             HHHHHHHH------HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHH
T ss_pred             HHHHHHHH------HcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChh
Confidence            99999988      679999999999987  3456889999999999999999999999999999876 79999999999


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  288 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~  288 (369)
                      +.                    .+.++...|++||+|+.+|+++|+.|++   +.||+||+|+||++.|++....+... 
T Consensus       152 ~~--------------------~~~~~~~~Y~asKaal~~lt~~la~E~~---~~gIrVN~I~PG~~~t~~~~~~~~~~-  207 (302)
T d1gz6a_         152 GI--------------------YGNFGQANYSAAKLGLLGLANTLVIEGR---KNNIHCNTIAPNAGSRMTETVMPEDL-  207 (302)
T ss_dssp             HH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEEECCSTTTGGGSCHHH-
T ss_pred             hc--------------------CCCCCcHHHHHHHHHHHHHHHHHHHHHh---ccCCceeeeCCCCCCcchhhcCcHhh-
Confidence            88                    7788899999999999999999999998   89999999999999998876654421 


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc------------CCcccCCHHHHHHHHHHHHHh
Q 017580          289 LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN------------SSALSFNSKLAGELWTTSCNL  356 (369)
Q Consensus       289 ~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~------------~~~~~~d~~~~~~lw~~~~~~  356 (369)
                                .+..+|+|+|+.++|++......+|+.+.+++|....            ......+.|...+-|+.+.++
T Consensus       208 ----------~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~  277 (302)
T d1gz6a_         208 ----------VEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDF  277 (302)
T ss_dssp             ----------HHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCC
T ss_pred             ----------HhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCc
Confidence                      2345899999999966543335689998888875431            112234555555567766654


Q ss_pred             hhccCC
Q 017580          357 FINSQL  362 (369)
Q Consensus       357 ~~~~~~  362 (369)
                      -....|
T Consensus       278 ~~~~~p  283 (302)
T d1gz6a_         278 SNASKP  283 (302)
T ss_dssp             TTCBCC
T ss_pred             ccCcCC
Confidence            444333

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.2e-43  Score=317.26  Aligned_cols=240  Identities=23%  Similarity=0.260  Sum_probs=202.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe-CCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .|+||+||||||++|||+++|++|+++|++|++++ |+++.++++.+++++.  +.+++.+++|++|+++++++++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999875 4556678888888765  45789999999999999999999998


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                            ++++||++|||||...  +..+.+.+.|++.|++|+.+++++++.++|+|+++   |++++++|..+.      
T Consensus        81 ------~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---g~~iii~s~~~~------  145 (259)
T d1ja9a_          81 ------HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSSIAAV------  145 (259)
T ss_dssp             ------HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE---EEEEEECCGGGT------
T ss_pred             ------HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC---Cccccccccccc------
Confidence                  5688999999999863  44578999999999999999999999999999763   688888887665      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch------------
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP------------  284 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~------------  284 (369)
                                   ..+.+....|++||+|+.+|+|+|++|++   +.||+||+|+||+++|+|.+...            
T Consensus       146 -------------~~~~~~~~~Y~asK~al~~l~r~lA~e~~---~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  209 (259)
T d1ja9a_         146 -------------MTGIPNHALYAGSKAAVEGFCRAFAVDCG---AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP  209 (259)
T ss_dssp             -------------CCSCCSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC
T ss_pred             -------------ccCCCCchhHHHHHHHHHHHHHHHHHHHh---hcCeEEeccCcCCccChhhhhhhhhhhhhhcccCC
Confidence                         14678889999999999999999999998   88999999999999999865421            


Q ss_pred             hHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017580          285 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  332 (369)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~  332 (369)
                      ............|++|+.+|+|+|+++++++... ...+|+.+.+|+|.
T Consensus       210 ~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         210 QEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            1222233445568899999999999999544321 24689999999885

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=6.5e-44  Score=319.27  Aligned_cols=237  Identities=18%  Similarity=0.242  Sum_probs=198.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCC-ChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS-SFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls-~~~~i~~~~~~i~~  138 (369)
                      +++||+||||||++|||+++|++|+++|++|++++|+.++.+++ +++....++.++.++.+|++ +.++++++++++.+
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999988775554 55566666789999999998 67789999999999


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--~~g~IV~vsS~~~~~~~~~~  216 (369)
                            ++++||+||||||..      +++.|++++++|+.|+++++++++|.|.+++  ..|+||++||.++.      
T Consensus        81 ------~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~------  142 (254)
T d1sbya1          81 ------QLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF------  142 (254)
T ss_dssp             ------HHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc------
Confidence                  568999999999963      5688999999999999999999999997653  35899999999998      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  296 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  296 (369)
                                    .+.+++.+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.+...............
T Consensus       143 --------------~~~~~~~~Y~asKaal~~~t~~la~el~---~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~  205 (254)
T d1sbya1         143 --------------NAIHQVPVYSASKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL  205 (254)
T ss_dssp             --------------SCCTTSHHHHHHHHHHHHHHHHHHHHHH---HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH
T ss_pred             --------------cCCCCCHHHHHHHHHHHHHHHHHHhhcc---ccCeEEEEEEeCCCcCccccccccchhHHHHHHhc
Confidence                          8889999999999999999999999998   88999999999999999876543322111112222


Q ss_pred             Hh-hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          297 LL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       297 ~~-~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      ++ .+..+||++|+.++++..  ...+|+.+..++|+..
T Consensus       206 ~~~~~~~~~e~va~~~~~~~~--~~~tG~vi~vdgG~l~  242 (254)
T d1sbya1         206 LLSHPTQTSEQCGQNFVKAIE--ANKNGAIWKLDLGTLE  242 (254)
T ss_dssp             HTTSCCEEHHHHHHHHHHHHH--HCCTTCEEEEETTEEE
T ss_pred             cccCCCCCHHHHHHHHHHhhh--CCCCCCEEEECCCEeC
Confidence            33 346789999999986553  3358999988988643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=2.7e-43  Score=322.78  Aligned_cols=270  Identities=20%  Similarity=0.162  Sum_probs=220.5

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           56 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        56 ~~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      .|..+++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++.+|++++++++++++.
T Consensus        18 ~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~   96 (294)
T d1w6ua_          18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSE   96 (294)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhh
Confidence            34468999999999999999999999999999999999999999999999887765 56789999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +.+      .++++|+||||||...  +....+.+.+++.+.+|+.+.+.+.+...+.+......+.+++++|..+.   
T Consensus        97 ~~~------~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~---  167 (294)
T d1w6ua_          97 LIK------VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE---  167 (294)
T ss_dssp             HHH------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH---
T ss_pred             hhh------hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh---
Confidence            988      6799999999999863  34567889999999999999999999988887766556889999998877   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHHHHH
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLSLMA  291 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--~~~~~~  291 (369)
                                       .+.++..+|++||+|+.+|+|++++|++   +.|||||+|+||+|+|++......  ......
T Consensus       168 -----------------~~~~~~~~YsasKaal~~ltk~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~  227 (294)
T d1w6ua_         168 -----------------TGSGFVVPSASAKAGVEAMSKSLAAEWG---KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKE  227 (294)
T ss_dssp             -----------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCC------CCTTSHHHHH
T ss_pred             -----------------hcccccchHHHHHHHHHHHHHHHHHHHh---HhCeEEEEEccCccccchhhhccCCcHHHHHH
Confidence                             6677888999999999999999999998   899999999999999999765422  222333


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccCCcccCCH-HHHHHHHHHHHH
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSALSFNS-KLAGELWTTSCN  355 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~~~~~~~d~-~~~~~lw~~~~~  355 (369)
                      .....|++|+.+|+|+|+.+++++.. +...+|+.+.+|+|..+..+....+. +..+.-|+..++
T Consensus       228 ~~~~~pl~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l~~~~~~~~~~~~~~~~~~~~~~  293 (294)
T d1w6ua_         228 MIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEE  293 (294)
T ss_dssp             HHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTT
T ss_pred             HhhcCCCCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChhheeCCCCCchhhcchhhhhhHhh
Confidence            44456889999999999999954432 12569999999999876555444443 334556776654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.7e-43  Score=313.12  Aligned_cols=228  Identities=21%  Similarity=0.216  Sum_probs=191.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.           ...++.||+++.  ++.    +.+  
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-----------~~~~~~~Dv~~~--~~~----~~~--   62 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----------GHRYVVCDLRKD--LDL----LFE--   62 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-----------CSEEEECCTTTC--HHH----HHH--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-----------CCcEEEcchHHH--HHH----HHH--
Confidence            6899999999999999999999999999999999997654321           235678999863  333    333  


Q ss_pred             hccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          +++++|+||||||+.  .+..+++.++|++.+++|+.++++++|+++|.|++++ .|+||+++|..+.        
T Consensus        63 ----~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~--------  129 (234)
T d1o5ia_          63 ----KVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVI--------  129 (234)
T ss_dssp             ----HSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             ----HhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccccccccccccc--------
Confidence                468899999999976  4556889999999999999999999999999999876 7999999999887        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.+....|++||+|+.+|+|++++|++   +.|||||+|+||+++|++.+...............|+
T Consensus       130 ------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl  194 (234)
T d1o5ia_         130 ------------SPIENLYTSNSARMALTGFLKTLSFEVA---PYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM  194 (234)
T ss_dssp             ------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT
T ss_pred             ------------ccccccccchhHHHHHHHHHHHHHHHhc---ccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC
Confidence                        7788899999999999999999999998   8899999999999999998765443334444555789


Q ss_pred             hCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017580          299 GLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~  335 (369)
                      +|+.+|+|+|+.+++++.. +...+|+.+.+|+|....
T Consensus       195 ~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~~  232 (234)
T d1o5ia_         195 RRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSKF  232 (234)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcccccC
Confidence            9999999999999955432 235689999999987543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.9e-43  Score=315.61  Aligned_cols=244  Identities=20%  Similarity=0.291  Sum_probs=205.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      ...+|+||++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++++.  +.++.++++|++|++++++++++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHH
Confidence            4457999999999999999999999999999999999887 45677788877765  56789999999999999999999


Q ss_pred             HHHHHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  213 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~  213 (369)
                      +.+      .++++|++|||||..  .+..+.+.+.|++.+++|+.++++++++++|+|+++   |++++++|..+.   
T Consensus        90 ~~~------~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~---g~~i~i~s~~~~---  157 (272)
T d1g0oa_          90 AVK------IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG---GRLILMGSITGQ---  157 (272)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT---CEEEEECCGGGT---
T ss_pred             HHH------HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc---cccccccccccc---
Confidence            998      568899999999986  345678999999999999999999999999999764   799999988765   


Q ss_pred             cccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--------
Q 017580          214 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--------  285 (369)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~--------  285 (369)
                                      ..+.+....|++||+|+++|+|+|++|++   +.|||||+|+||+|+|++.+....        
T Consensus       158 ----------------~~~~~~~~~Y~asKaal~~ltk~lA~e~~---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~  218 (272)
T d1g0oa_         158 ----------------AKAVPKHAVYSGSKGAIETFARCMAIDMA---DKKITVNVVAPGGIKTDMYHAVCREYIPNGEN  218 (272)
T ss_dssp             ----------------CSSCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTT
T ss_pred             ----------------cccccchhhHHHHHHHHHHHHHHHHHHhc---hhCeEEEEEccCCcCChHHHHHHHhhhhcccc
Confidence                            14567778899999999999999999998   889999999999999998654311        


Q ss_pred             ----HHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          286 ----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       286 ----~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                          ...........|++|+.+|+|+|+++++++.. +...+|+.+.+|+|..
T Consensus       219 ~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         219 LSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             CCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence                11112233446789999999999999965432 1256899999998853

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=315.16  Aligned_cols=239  Identities=27%  Similarity=0.333  Sum_probs=191.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++|||||++|||+++|++|+++ |++|++++|++++++++.+++++.+  .++.+++||++|.++++++++++.+   
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dvs~~~sv~~~~~~~~~---   77 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRK---   77 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH---
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEEecCCHHHHHHHHHHHHH---
Confidence            357799999999999999999986 8999999999999999999998874  5678999999999999999999998   


Q ss_pred             ccCCCCCccEEEeccccccC--CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017580          142 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  219 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~  219 (369)
                         ++++||+||||||+..+  ..+.+.++|+++|++|++|++++++.++|.|++   .||||++||..+..+.+...++
T Consensus        78 ---~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y  151 (275)
T d1wmaa1          78 ---EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPE  151 (275)
T ss_dssp             ---HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHH
T ss_pred             ---hcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchh
Confidence               56899999999998743  345678899999999999999999999999975   3899999998775432111000


Q ss_pred             -------ccc--------------ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCC-CCCCeEEEEecCCcccC
Q 017580          220 -------ETI--------------TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKT  277 (369)
Q Consensus       220 -------~~~--------------~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~-~~~~i~v~~v~PG~v~T  277 (369)
                             ...              .........+..+..+|++||+++.+|++.+++|++.+ ...+|+||+|+||+|+|
T Consensus       152 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T  231 (275)
T d1wmaa1         152 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT  231 (275)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred             hhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccC
Confidence                   000              00000011233445689999999999999999998632 24699999999999999


Q ss_pred             CccccchhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEeC
Q 017580          278 NIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFG  328 (369)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~  328 (369)
                      +|.+..                ...+|+|+|+++++++..++   ..+|+|+..
T Consensus       232 ~m~~~~----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~  269 (275)
T d1wmaa1         232 DMAGPK----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVSE  269 (275)
T ss_dssp             TTTCTT----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEET
T ss_pred             CcccCc----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEEC
Confidence            997653                34599999999999887665   347999873

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-42  Score=306.94  Aligned_cols=234  Identities=20%  Similarity=0.236  Sum_probs=195.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+       ...+....+|+.+.+.++...+     
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~~~~~~~~~~~-----   70 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQFAN-----   70 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeecccccccccccc-----
Confidence            4789999999999999999999999999999999999877655432       2357788899988776655443     


Q ss_pred             HhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                           ..+++|+||||||...  +..+.+.+.|++.+++|+.+++.++++++|.|.+++ .|+||++||..+.       
T Consensus        71 -----~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~-------  137 (245)
T d2ag5a1          71 -----EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASS-------  137 (245)
T ss_dssp             -----HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT-------
T ss_pred             -----ccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-Cceeeeeechhhc-------
Confidence                 3578999999999874  456789999999999999999999999999998877 7999999998774       


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAF  292 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~-----~~~~~~~  292 (369)
                                  ..+.+...+|++||+|+++|+|+|++|++   ++|||||+|+||+|+|++.+....     .......
T Consensus       138 ------------~~~~~~~~~Y~~sKaal~~l~r~lA~e~~---~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  202 (245)
T d2ag5a1         138 ------------VKGVVNRCVYSTTKAAVIGLTKSVAADFI---QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDF  202 (245)
T ss_dssp             ------------TBCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHH
T ss_pred             ------------cCCccchhHHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHH
Confidence                        14678889999999999999999999998   899999999999999999865422     1122233


Q ss_pred             HHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017580          293 TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  333 (369)
Q Consensus       293 ~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~  333 (369)
                      ....|++|+.+|+|+|+.+.+++.. +...+|+.+.+|+|..
T Consensus       203 ~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         203 LKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            4456889999999999999965442 2367999999999864

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-41  Score=306.69  Aligned_cols=224  Identities=22%  Similarity=0.254  Sum_probs=179.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEE---EEeCCcchHHHHHHHHHhh-cCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVV---LVGRSSHLLSETMADITSR-NKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vv---l~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +|+||||||++|||+++|++|+++|++|+   +++|+.+..+++.+..++. ..+.++.++.||++|+++++++++++. 
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc-
Confidence            58999999999999999999999998754   4566655555544444332 235689999999999999999888763 


Q ss_pred             HHhccCCCCCccEEEeccccc--cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                             .+++|++|||||..  .+..+.+.+.|++++++|+.|+++++++++|+|++++ .|+||++||.++.      
T Consensus        81 -------~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~------  146 (285)
T d1jtva_          81 -------EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGL------  146 (285)
T ss_dssp             -------TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT------
T ss_pred             -------ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhc------
Confidence                   37899999999986  3456789999999999999999999999999999876 7999999999998      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----------
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----------  286 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~----------  286 (369)
                                    .+.+....|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.++....          
T Consensus       147 --------------~~~~~~~~Y~asKaal~~l~~~la~El~---~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~  209 (285)
T d1jtva_         147 --------------MGLPFNDVYCASKFALEGLCESLAVLLL---PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDI  209 (285)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCC-------CCHHHHHHTSCH
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCCCCChHHHHhccCHHHHhhccch
Confidence                          8889999999999999999999999998   8999999999999999998654210          


Q ss_pred             ------HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCC
Q 017580          287 ------LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       287 ------~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                            ..........+.++..+|||+|+.+++++..+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~  247 (285)
T d1jtva_         210 HTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP  247 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCS
T ss_pred             hHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCC
Confidence                  01111222334557789999999999877554

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.3e-41  Score=299.75  Aligned_cols=232  Identities=22%  Similarity=0.298  Sum_probs=180.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+.     .+.+++++++|++|+++++++++++.+.
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~-----~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-----KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-----CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh-----hCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            469999999999999999999999996  799999999888765432     2568999999999999999999999986


Q ss_pred             HhccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC----------CCCeEEEEcC
Q 017580          140 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----------VPSRIVNVTS  206 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~----------~~g~IV~vsS  206 (369)
                      ++    ..++|+||||||+..   +..+.+.++|++++++|+.|++++++.++|+|++++          ..+++++++|
T Consensus        77 ~~----~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~  152 (250)
T d1yo6a1          77 VG----SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS  152 (250)
T ss_dssp             HG----GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred             hC----CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccc
Confidence            53    246999999999863   345778999999999999999999999999997642          2478999998


Q ss_pred             CcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017580          207 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  286 (369)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~  286 (369)
                      ..+......             ...+..+..+|++||+|+.+|+++|+.|++   +.||+|++|+||+|+|+|....   
T Consensus       153 ~~~~~~~~~-------------~~~~~~~~~aY~aSKaal~~l~~~la~el~---~~gI~v~~i~PG~v~T~m~~~~---  213 (250)
T d1yo6a1         153 GLGSITDNT-------------SGSAQFPVLAYRMSKAAINMFGRTLAVDLK---DDNVLVVNFCPGWVQTNLGGKN---  213 (250)
T ss_dssp             GGGCSTTCC-------------STTSSSCBHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEEECCCC-----------
T ss_pred             ccccccCCc-------------ccccchhHHHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCCCCCCCCCCC---
Confidence            765522100             012344556899999999999999999998   8899999999999999997542   


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  335 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~g~~~~  335 (369)
                                   ...+|||+|..++..+...+ ..+|+||. .+|+|.+
T Consensus       214 -------------~~~~~e~~a~~~~~~~~~~~~~~sG~f~~-~~g~p~~  249 (250)
T d1yo6a1         214 -------------AALTVEQSTAELISSFNKLDNSHNGRFFM-RNLKPYE  249 (250)
T ss_dssp             ------------------HHHHHHHHHHHTTCCGGGTTCEEE-TTEEECC
T ss_pred             -------------CCCCHHHHHHHHHHHHhcCCCCCCeEEEC-CCCeeCC
Confidence                         12489999999998876654 56899875 5677753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-41  Score=299.01  Aligned_cols=231  Identities=19%  Similarity=0.239  Sum_probs=191.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.+.....+|+.+.+.+++..+++.. 
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~-   75 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG-   75 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCccccccccccccccccccccccc-
Confidence            689999999999999999999999999999999999999999988887     56788999999999999999999887 


Q ss_pred             HhccCCCCCccEEEecccccc--------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-----CCCeEEEEcC
Q 017580          140 LLDSDMHSSIQLLINNAGILA--------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNVTS  206 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~--------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~~g~IV~vsS  206 (369)
                           ....+|.+++|+++..        +..+.+.+.|++++++|+.+++++++++.|+|..+.     +.|+||++||
T Consensus        76 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS  150 (248)
T d2o23a1          76 -----KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  150 (248)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             -----ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecc
Confidence                 4577999999987642        234568899999999999999999999999987542     3689999999


Q ss_pred             CcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017580          207 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  286 (369)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~  286 (369)
                      ..+.                    .+.++..+|++||+|+.+|+++|++|++   +.||+||+|+||+++|+|....+..
T Consensus       151 ~~~~--------------------~~~~~~~~Y~asKaal~~lt~~la~e~~---~~gIrvN~I~PG~i~T~~~~~~~~~  207 (248)
T d2o23a1         151 VAAF--------------------EGQVGQAAYSASKGGIVGMTLPIARDLA---PIGIRVMTIAPGLFGTPLLTSLPEK  207 (248)
T ss_dssp             THHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCC--------
T ss_pred             hhhc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCcceeeeccCceecchhhcCCHH
Confidence            9988                    7788899999999999999999999998   8999999999999999998776543


Q ss_pred             HHHHHHHHHHHh-hCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017580          287 LSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYF  326 (369)
Q Consensus       287 ~~~~~~~~~~~~-~~~~~~~e~A~~v~~~~l~~~~~sG~~~  326 (369)
                      ... ......|+ +|+.+|+|+|+.+++++. ++..+|+.+
T Consensus       208 ~~~-~~~~~~pl~~R~g~peevA~~v~fL~s-~~~itGq~I  246 (248)
T d2o23a1         208 VCN-FLASQVPFPSRLGDPAEYAHLVQAIIE-NPFLNGEVI  246 (248)
T ss_dssp             --C-HHHHTCSSSCSCBCHHHHHHHHHHHHH-CTTCCSCEE
T ss_pred             HHH-HHHhcCCCCCCCcCHHHHHHHHHHHHh-CCCCCceEe
Confidence            221 22233444 789999999999997653 445677655

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.8e-40  Score=296.37  Aligned_cols=228  Identities=20%  Similarity=0.254  Sum_probs=184.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH---HCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALS---REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La---~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      -|+||||||++|||+++|++|+   ++|++|++++|++++++++.+.. +.  ..++.+++||++|+++++++++++++.
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-KN--HSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-HH--CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-hc--CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            3799999999999999999996   57999999999999988876443 33  458999999999999999999998653


Q ss_pred             HhccCCCCCccEEEeccccccC---CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC----------CCCeEEEEcC
Q 017580          140 LLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----------VPSRIVNVTS  206 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~----------~~g~IV~vsS  206 (369)
                      .    .++++|+||||||+..+   ..+.+.+++++++++|+.|++++++.++|+|+++.          ..|+||+++|
T Consensus        79 ~----~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S  154 (248)
T d1snya_          79 T----KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS  154 (248)
T ss_dssp             H----GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred             h----hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccc
Confidence            3    45889999999998643   34678999999999999999999999999997641          2589999999


Q ss_pred             CcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017580          207 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  286 (369)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~  286 (369)
                      ..+...                 ..+.++..+|++||+|+.+|+++++.|++   +.||+||+|+||+|+|+|.+...+ 
T Consensus       155 ~~g~~~-----------------~~~~~~~~~Y~aSKaal~~lt~~la~e~~---~~gI~vn~v~PG~v~T~m~~~~~~-  213 (248)
T d1snya_         155 ILGSIQ-----------------GNTDGGMYAYRTSKSALNAATKSLSVDLY---PQRIMCVSLHPGWVKTDMGGSSAP-  213 (248)
T ss_dssp             GGGCST-----------------TCCSCCCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEECCCSBCSTTTCTTCS-
T ss_pred             cccccC-----------------CCCCCChHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEcCCCcccCCcccccCC-
Confidence            887622                 13456778999999999999999999998   889999999999999999875322 


Q ss_pred             HHHHHHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          287 LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                                     .++++.++.+++.+.. .+..+|+|+.. +|+++
T Consensus       214 ---------------~~~~~~~~~i~~~i~~l~~~~tG~~i~~-dG~~i  246 (248)
T d1snya_         214 ---------------LDVPTSTGQIVQTISKLGEKQNGGFVNY-DGTPL  246 (248)
T ss_dssp             ---------------BCHHHHHHHHHHHHHHCCGGGTTCEECT-TSCBC
T ss_pred             ---------------CCchHHHHHHHHHHHhcCccCCCcEEEE-CCeEc
Confidence                           2444555555544433 33568998864 45554

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-40  Score=296.42  Aligned_cols=220  Identities=22%  Similarity=0.274  Sum_probs=191.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||+|||||||+|||+++|++|+++|++|++++|++++++++.+++.... +..+..+.+|+++.+++....+.+.+  
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~--   88 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGK--   88 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHH--
Confidence            899999999999999999999999999999999999999999999887665 56889999999999999999999988  


Q ss_pred             hccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          141 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                          .++.+|+++||||...  +..+.+.+.+++++++|+.|++.+++.++|+|+++  .|+||++||.++.        
T Consensus        89 ----~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~--------  154 (269)
T d1xu9a_          89 ----LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGK--------  154 (269)
T ss_dssp             ----HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGT--------
T ss_pred             ----HhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhc--------
Confidence                5588999999999863  44577999999999999999999999999999865  4999999999998        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.++..+|++||+|+.+|+++|+.|++.. +.+|+||+|+||+|+|+|.++.....         +.
T Consensus       155 ------------~~~p~~~~Y~asKaal~~~~~~La~El~~~-~~~I~V~~v~PG~v~T~~~~~~~~~~---------~~  212 (269)
T d1xu9a_         155 ------------VAYPMVAAYSASKFALDGFFSSIRKEYSVS-RVNVSITLCVLGLIDTETAMKAVSGI---------VH  212 (269)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEECCBCCHHHHHHSCGG---------GG
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHHhhhc-CCCEEEEEEecCcCCCcHHHHhccCC---------cc
Confidence                        888999999999999999999999998621 36799999999999999876432111         01


Q ss_pred             hCCCCHHHHHHHHHHHhcCCC
Q 017580          299 GLLQSPEKGINSVLDAALAPP  319 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~  319 (369)
                      ....+||++|+.++......+
T Consensus       213 ~~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         213 MQAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             GGCBCHHHHHHHHHHHHHTTC
T ss_pred             ccCCCHHHHHHHHHHHhhcCC
Confidence            124589999999997665443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-37  Score=276.98  Aligned_cols=240  Identities=16%  Similarity=0.171  Sum_probs=201.0

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      |+||++|||||+|  |||+++|+.|+++|++|++++|+++..+.+ +++...  ..+...+.+|+++..++.+.++++.+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhhh
Confidence            6899999999998  899999999999999999999997655554 444333  34567889999999999999999888


Q ss_pred             HHhccCCCCCccEEEeccccccCC-------CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~-------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                            .++++|++||||+.....       .....+.+...+++|+.+.+.+++.+.|.+.+   ++.||++||..+. 
T Consensus        80 ------~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~-  149 (258)
T d1qsga_          80 ------VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAE-  149 (258)
T ss_dssp             ------TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT-
T ss_pred             ------cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhc-
Confidence                  789999999999986322       13466778999999999999999999999865   3689999998887 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLM  290 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~-~~~~  290 (369)
                                         .+.|....|++||+|+++|++++++|++   ++|||||+|+||+|+|++....... ....
T Consensus       150 -------------------~~~~~~~~Y~~sKaal~~ltr~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~  207 (258)
T d1qsga_         150 -------------------RAIPNYNVMGLAKASLEANVRYMANAMG---PEGVRVNAISAGPIRTLAASGIKDFRKMLA  207 (258)
T ss_dssp             -------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCCCCTTGGGSTTHHHHHH
T ss_pred             -------------------cCCCCcHHHHHHHHHHHHHHHHHHHHhC---ccCceeecccccccccccccccchhhhHHH
Confidence                               7778889999999999999999999998   8999999999999999998875433 3333


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017580          291 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       291 ~~~~~~~~~~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~~  335 (369)
                      ......|++|+.+|||+|+.+.+++.. +...+|+.+.+|+|..+.
T Consensus       208 ~~~~~~pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         208 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHhCCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHHh
Confidence            445567899999999999999954432 125799999999998764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2.4e-37  Score=280.14  Aligned_cols=260  Identities=17%  Similarity=0.178  Sum_probs=199.1

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      |+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+..  ....++.+|++++++++++++++.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL--NSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhC--CceeEeeecccchhhHHHHHHHHHH
Confidence            6899999999865  9999999999999999999999954 444556665553  4567789999999999999999998


Q ss_pred             HHhccCCCCCccEEEeccccccCC---CC---CCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATS---SR---LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  212 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~---~~---~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~  212 (369)
                            .++++|++|||+|.....   ..   ...+.+...+.++..+.....+.+.+.+..   .+.|+++||.+..  
T Consensus        80 ------~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~--  148 (274)
T d2pd4a1          80 ------DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGST--  148 (274)
T ss_dssp             ------HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT--
T ss_pred             ------HcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc---Ccceeeecccccc--
Confidence                  678999999999986332   12   233444444555555555555555544322   3456666666655  


Q ss_pred             ccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHHH
Q 017580          213 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMA  291 (369)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-~~~~  291 (369)
                                        .+.+....|++||+|+.+++|++++|++   +.|||||+|+||+++|++........ ....
T Consensus       149 ------------------~~~~~~~~y~asK~al~~ltr~lA~e~~---~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~  207 (274)
T d2pd4a1         149 ------------------KYMAHYNVMGLAKAALESAVRYLAVDLG---KHHIRVNALSAGPIRTLASSGIADFRMILKW  207 (274)
T ss_dssp             ------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCTTGGGSTTHHHHHHH
T ss_pred             ------------------cccccchhhhHHHHHHHHHHHhhHHHhc---CcCceecccccCcccCccccccCchHHHHHH
Confidence                              5667778999999999999999999998   89999999999999999987765433 3334


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcc-cCCHHHHHHHHHHHHH
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSAL-SFNSKLAGELWTTSCN  355 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~~~~~-~~d~~~~~~lw~~~~~  355 (369)
                      .....|++|+.+|+|+|+.+++++... ...+|+.+.+|+|..+..... ...++.++.+|+.+++
T Consensus       208 ~~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~~~~  273 (274)
T d2pd4a1         208 NEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  273 (274)
T ss_dssp             HHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             HhhhhhccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChhhccCCcccccccchhhhhhhhcc
Confidence            455668899999999999999655321 357999999999986644443 5667888999997653

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1e-36  Score=277.23  Aligned_cols=239  Identities=18%  Similarity=0.184  Sum_probs=184.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC-cchHHHHHHHHHhhcCCCcEEE-----------------EEecCCC
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEA-----------------FQVDLSS  125 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~-~~~~~~~~~~~~~~~~~~~v~~-----------------~~~Dls~  125 (369)
                      +++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++.+.++. ....                 +.+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCC-ceEEEEeecccccccccccccccccCCC
Confidence            589999999999999999999999999998765 56677888888776543 3333                 4567999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCccEEEeccccccC--CCCCCHHhH--------------HHhhhhhhHHHHHHHHHHh
Q 017580          126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGY--------------DQMMSTNYIGAFFLTKLLL  189 (369)
Q Consensus       126 ~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~--------------~~~~~vN~~~~~~l~~~~~  189 (369)
                      +++++++++++.+      ++++||+||||||+..+  ..+.+.+.+              ...|.+|+.+++++++.+.
T Consensus        82 ~~~v~~~~~~~~~------~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  155 (284)
T d1e7wa_          82 FTRCAELVAACYT------HWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  155 (284)
T ss_dssp             HHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH------HhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeecccc
Confidence            9999999999998      56899999999998743  334444443              3578999999999999988


Q ss_pred             Hhhhc-----CCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCC
Q 017580          190 PLLKN-----SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  264 (369)
Q Consensus       190 ~~~~~-----~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~  264 (369)
                      +.+..     +...++||+++|..+.                    .+.++..+|++||+|+.+|+++|++|++   +.|
T Consensus       156 ~~~~~~~~~~~~~~~~ii~~~s~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~g  212 (284)
T d1e7wa_         156 HRVAGTPAKHRGTNYSIINMVDAMTN--------------------QPLLGYTIYTMAKGALEGLTRSAALELA---PLQ  212 (284)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGT
T ss_pred             chhhhhHHHhcCCCCccccccccccc--------------------CCccceeeeccccccchhhhHHHHHHhC---Ccc
Confidence            76532     2236899999998887                    7788889999999999999999999998   899


Q ss_pred             eEEEEecCCcccCCccccchhHHHHHHHHHHHH-hhCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017580          265 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  335 (369)
Q Consensus       265 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~~  335 (369)
                      |+||+|+||++.|..  ..+... ........| .+|+.+|+|+|+++++++... ...+|+.+.+|+|..+.
T Consensus       213 IrvN~I~PG~t~~~~--~~~~~~-~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         213 IRVNGVGPGLSVLVD--DMPPAV-WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             EEEEEEEESSBCCGG--GSCHHH-HHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccccccccccccccc--cCCHHH-HHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            999999999865433  333222 222233344 489999999999999655322 25789999999998653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.2e-37  Score=272.03  Aligned_cols=228  Identities=21%  Similarity=0.262  Sum_probs=187.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .|+||||||++|||+++|++|+++|++|++++|+++              ..+....++|+++...+..+.......   
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~---   63 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEE---   63 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhcc---
Confidence            389999999999999999999999999999999875              345678899999999999988877662   


Q ss_pred             cCCCCCccEEEeccccc------cCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC-----CCCeEEEEcCCcccc
Q 017580          143 SDMHSSIQLLINNAGIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNVTSFTHRN  211 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~~g~IV~vsS~~~~~  211 (369)
                          ...+.+++++++.      ......+.+.+++.+++|+.+++.+++.+.+.+....     +.|+||++||..+. 
T Consensus        64 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~-  138 (241)
T d1uaya_          64 ----APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF-  138 (241)
T ss_dssp             ----SCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH-
T ss_pred             ----ccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhc-
Confidence                3456666666653      2233567889999999999999999999999854321     26899999999988 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  291 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~  291 (369)
                                         .+.++..+|++||+|+.+|+|+|+.|++   ++|||||+|+||+|+|++.+..........
T Consensus       139 -------------------~~~~~~~~Y~asKaal~~lt~~lA~ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~  196 (241)
T d1uaya_         139 -------------------EGQIGQAAYAASKGGVVALTLPAARELA---GWGIRVVTVAPGLFDTPLLQGLPEKAKASL  196 (241)
T ss_dssp             -------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSCSSHHHHTSCHHHHHHH
T ss_pred             -------------------cCCCCchhhHHHHHHHHHHHHHHHHHHh---hcCCceeeecCCcccccccchhhhhHHHHH
Confidence                               7788899999999999999999999998   899999999999999999877654333222


Q ss_pred             HHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          292 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       292 ~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      .....+.+|+.+|||+|+.+++++. +...+|+.+.+|+|..+.
T Consensus       197 ~~~~~~~~R~g~pedvA~~v~fL~s-~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         197 AAQVPFPPRLGRPEEYAALVLHILE-NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             HTTCCSSCSCCCHHHHHHHHHHHHH-CTTCCSCEEEESTTCCCC
T ss_pred             HhcCCCCCCCcCHHHHHHHHHHHHh-CCCCCCCEEEECCcccCC
Confidence            2222234789999999999998764 457899999999997654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3e-37  Score=286.42  Aligned_cols=241  Identities=14%  Similarity=0.135  Sum_probs=189.5

Q ss_pred             CCCEEEEeC--CCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCC----------CcEEEEE---------
Q 017580           62 KRPVCIVTG--ATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD----------ARLEAFQ---------  120 (369)
Q Consensus        62 ~~k~vlITG--as~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~----------~~v~~~~---------  120 (369)
                      ++|++||||  +++|||+++|+.|+++|++|++++++.............+...          .......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  5689999999999999999999999877655554443322110          1122332         


Q ss_pred             -----------ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecccccc----CCCCCCHHhHHHhhhhhhHHHHHHH
Q 017580          121 -----------VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLT  185 (369)
Q Consensus       121 -----------~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~  185 (369)
                                 +|+++.++++++++++.+      .+++||+||||||...    +..+.+.++|+++|++|+++.+.++
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~------~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  154 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQ------KYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLC  154 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHH------HHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHH------HhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHH
Confidence                       367788899999999999      5689999999999753    4557899999999999999999999


Q ss_pred             HHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCch-hhhhhhhHHHHHHHHHHHHHHhCCCCC-C
Q 017580          186 KLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKS-R  263 (369)
Q Consensus       186 ~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~SK~a~~~~~~~la~el~~~~~-~  263 (369)
                      |+++|+|++   .|+||++||.++.                    .+.|+ ...|++||+|+++|+|+|+.||+   + +
T Consensus       155 k~~~~~m~~---~GsIv~iss~~~~--------------------~~~p~y~~~y~asKaal~~ltr~lA~Ela---~~~  208 (329)
T d1uh5a_         155 KYFVNIMKP---QSSIISLTYHASQ--------------------KVVPGYGGGMSSAKAALESDTRVLAYHLG---RNY  208 (329)
T ss_dssp             HHHGGGEEE---EEEEEEEECGGGT--------------------SCCTTCTTTHHHHHHHHHHHHHHHHHHHH---HHH
T ss_pred             HHHHhhccc---ccccccceeehhc--------------------ccccccchhhhhhhccccccchhhHHHHh---ccc
Confidence            999999965   4899999998887                    55555 46799999999999999999997   5 5


Q ss_pred             CeEEEEecCCcccCCccccch--------------------------------------------hHHHHHHHHHHHHhh
Q 017580          264 HVSVIAADPGVVKTNIMREVP--------------------------------------------SFLSLMAFTVLKLLG  299 (369)
Q Consensus       264 ~i~v~~v~PG~v~T~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~  299 (369)
                      |||||+|+||+|+|++.+..+                                            ............|++
T Consensus       209 gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~  288 (329)
T d1uh5a_         209 NIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLR  288 (329)
T ss_dssp             CCEEEEEEECCCCCTTGGGCC------------------------------------------CHHHHHHHHHHHHSSSC
T ss_pred             CcEEEEEecCcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCC
Confidence            999999999999996443321                                            111222344456889


Q ss_pred             CCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          300 LLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       300 ~~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      |+.+|+|+|+++++++.. +...+|+.+.+|+|..+
T Consensus       289 R~~~pedvA~~v~fLaSd~s~~iTGq~i~VDGG~~~  324 (329)
T d1uh5a_         289 QKLLSTDIGSVASFLLSRESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHHHHhCchhCCccCCeEEECCCccc
Confidence            999999999999954432 12578999999999754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.5e-37  Score=271.54  Aligned_cols=216  Identities=14%  Similarity=0.055  Sum_probs=178.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +||+||||||++|||+++|++|+++|++|+++++++...            ........+|.++.++++.+.+.+.+.+ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   67 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLL-   67 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHh-
Confidence            489999999999999999999999999999999876421            2345677888888999988888887766 


Q ss_pred             ccCCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          142 DSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                         ..+++|+||||||...   +..+.+.+.|+++|++|+.++++++++++|+|++   .|+||++||.++.        
T Consensus        68 ---~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~--------  133 (236)
T d1dhra_          68 ---GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAAL--------  133 (236)
T ss_dssp             ---TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG--------
T ss_pred             ---CCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHc--------
Confidence               3468999999999652   3345667899999999999999999999999965   4899999999988        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                                  .+.+...+|++||+|+.+|+++|+.|++. .++||+||+|+||+|+|+|.+......         ..
T Consensus       134 ------------~~~~~~~~Y~asKaal~~lt~~la~El~~-~~~gI~vn~v~PG~v~T~~~~~~~~~~---------~~  191 (236)
T d1dhra_         134 ------------DGTPGMIGYGMAKGAVHQLCQSLAGKNSG-MPSGAAAIAVLPVTLDTPMNRKSMPEA---------DF  191 (236)
T ss_dssp             ------------SCCTTBHHHHHHHHHHHHHHHHHTSTTSS-CCTTCEEEEEEESCEECHHHHHHSTTS---------CG
T ss_pred             ------------CCccCCcccHHHHHHHHHHHHHHHHHhcc-CCCcEEEEEEEeccCcCCcchhhCccc---------hh
Confidence                        78889999999999999999999999962 137999999999999999976432111         12


Q ss_pred             hCCCCHHHHHHHHHHHhcCCC-CCcccEE
Q 017580          299 GLLQSPEKGINSVLDAALAPP-ETSGVYF  326 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~-~~sG~~~  326 (369)
                      .++.+|+++|+.+.+++.... ..+|..+
T Consensus       192 ~~~~~pe~va~~~~~l~s~~~~~i~G~~i  220 (236)
T d1dhra_         192 SSWTPLEFLVETFHDWITGNKRPNSGSLI  220 (236)
T ss_dssp             GGSEEHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             hcCCCHHHHHHHHHHHhCCCccCCCCCeE
Confidence            356789999999997665443 4678755

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=8.8e-36  Score=272.85  Aligned_cols=244  Identities=14%  Similarity=0.107  Sum_probs=189.1

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC---------CC-cEEEEEec----
Q 017580           59 TGIKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK---------DA-RLEAFQVD----  122 (369)
Q Consensus        59 ~~~~~k~vlITGas~--gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~---------~~-~v~~~~~D----  122 (369)
                      .+|+||++|||||+|  |||+++|++|+++|++|++++|++...............         .. .-....+|    
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            368999999999875  999999999999999999999986544433332221110         01 11333443    


Q ss_pred             ----------------CCChHHHHHHHHHHHHHHhccCCCCCccEEEeccccc----cCCCCCCHHhHHHhhhhhhHHHH
Q 017580          123 ----------------LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAF  182 (369)
Q Consensus       123 ----------------ls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~  182 (369)
                                      .++.++++++++++.+      ++++||+||||||..    .+..+.+.++|++++++|+.+++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~------~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~  157 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQ------DFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV  157 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHH------HHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHH------HhCCCcccccccccccccccchhhhhcccccccccchhhhhh
Confidence                            3556677889999988      568999999999974    34567899999999999999999


Q ss_pred             HHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCC
Q 017580          183 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  262 (369)
Q Consensus       183 ~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~  262 (369)
                      .++++++|.|.++   |+++++++.++..                   ...+....|+++|+++..+++.++.|++.  +
T Consensus       158 ~~~~~~~~~~~~~---g~~~~~~~~~~~~-------------------~~~~~~~~y~~aKaa~~~l~~~~a~e~~~--~  213 (297)
T d1d7oa_         158 SLLSHFLPIMNPG---GASISLTYIASER-------------------IIPGYGGGMSSAKAALESDTRVLAFEAGR--K  213 (297)
T ss_dssp             HHHHHHGGGEEEE---EEEEEEECGGGTS-------------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHH--H
T ss_pred             hhhhHHHHHhhcC---Ccceeeeehhhcc-------------------cccccccceecccccccccccccchhccc--c
Confidence            9999999998764   5777777766541                   33466678999999999999999999951  4


Q ss_pred             CCeEEEEecCCcccCCccccchhHHH-HHHHHHHHHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017580          263 RHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  334 (369)
Q Consensus       263 ~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~~g~~~  334 (369)
                      .|||||+|+||+++|++.+....... ........|++|+.+|||+|+.+++  |+++   ..+|+.+.+|+|...
T Consensus       214 ~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~f--L~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         214 QNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAF--LVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHH--HTSGGGTTCCSCEEEESTTGGG
T ss_pred             ceEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHH--HhCchhcCCcCceEEECcCHhh
Confidence            69999999999999999887543322 2334455689999999999999994  4444   568999999999764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=9.9e-36  Score=263.31  Aligned_cols=216  Identities=15%  Similarity=0.042  Sum_probs=175.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++||||||++|||+++|++|+++|++|++++|+++..            ........+|..+.++.....+.+...+   
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   67 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSL---   67 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHh---
Confidence            4579999999999999999999999999999987531            2344566788888888887777777765   


Q ss_pred             CCCCCccEEEecccccc---CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          144 DMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                       .+++||+||||||+..   +..+.+.+.++.++++|+.++++++++++|+|++   .|+||++||..+.          
T Consensus        68 -~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~----------  133 (235)
T d1ooea_          68 -QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAM----------  133 (235)
T ss_dssp             -TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG----------
T ss_pred             -cCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhc----------
Confidence             5689999999999752   2334556889999999999999999999999975   4899999999988          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhhC
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  300 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  300 (369)
                                .+.++..+|++||+|+.+|+++|+.|++.. +.+|+||+|+||+++|++.+......         ...+
T Consensus       134 ----------~~~~~~~~Y~asKaal~~l~~~la~e~~~~-~~~i~v~~i~Pg~~~T~~~~~~~~~~---------~~~~  193 (235)
T d1ooea_         134 ----------GPTPSMIGYGMAKAAVHHLTSSLAAKDSGL-PDNSAVLTIMPVTLDTPMNRKWMPNA---------DHSS  193 (235)
T ss_dssp             ----------SCCTTBHHHHHHHHHHHHHHHHHHSTTSSC-CTTCEEEEEEESCBCCHHHHHHSTTC---------CGGG
T ss_pred             ----------CCcccccchHHHHHHHHHHHHHHHHHhccC-CCceEEEEEecCcCcCcchhhhCcCC---------cccc
Confidence                      788899999999999999999999999621 47999999999999999876532211         1235


Q ss_pred             CCCHHHHHHHHHHHhcCCC--CCcccEEeC
Q 017580          301 LQSPEKGINSVLDAALAPP--ETSGVYFFG  328 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~~--~~sG~~~~~  328 (369)
                      +.+|+++|+.++..+....  ..+|..+.+
T Consensus       194 ~~~~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         194 WTPLSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             CBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             CCCHHHHHHHHHHHhcCccccCCCceEEEE
Confidence            6799999999885454433  468887754

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.4e-34  Score=261.00  Aligned_cols=240  Identities=15%  Similarity=0.172  Sum_probs=188.2

Q ss_pred             CCCCEEEEeCC--CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGa--s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      |+||++|||||  ++|||+++|++|+++|++|++++|+.++..+   ++.+.. +.+...++||+++++++.++++.+.+
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhhh
Confidence            68999999995  5799999999999999999999999876533   222222 55678899999999999999999988


Q ss_pred             HHhccCCCCCccEEEecccccc-------CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA-------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  211 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~-------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~  211 (369)
                      .+.   ..+++|++|||||+..       +..+.+.+.+.+.+++|+.+.+...+.+.+.+..    +.+++++|.... 
T Consensus        80 ~~~---~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~s~~~~-  151 (268)
T d2h7ma1          80 AIG---AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP----GGSIVGMDFDPS-  151 (268)
T ss_dssp             HHC---TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----EEEEEEEECCCS-
T ss_pred             ccc---cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc----cccccccccccc-
Confidence            764   4578999999999752       2235678999999999999999999998887643    345555555544 


Q ss_pred             cccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh------
Q 017580          212 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS------  285 (369)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~------  285 (369)
                                         .+.|....|++||+|+.++++++++|++   +.|||||+|+||+|+|++.+....      
T Consensus       152 -------------------~~~p~~~~y~~sK~a~~~ltr~lA~e~~---~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~  209 (268)
T d2h7ma1         152 -------------------RAMPAYNWMTVAKSALESVNRFVAREAG---KYGVRSNLVAAGPIRTLAMSAIVGGALGEE  209 (268)
T ss_dssp             -------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCHHHHHHHTTTTCHH
T ss_pred             -------------------ccCcccchhhccccchhhccccchhhhh---ccCCcceEEecCCCCChhhhhhccchhhhh
Confidence                               5677888999999999999999999998   899999999999999998754321      


Q ss_pred             HHH-----HHHHHHHHHhhC-CCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017580          286 FLS-----LMAFTVLKLLGL-LQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  334 (369)
Q Consensus       286 ~~~-----~~~~~~~~~~~~-~~~~~e~A~~v~~~~l~-~~~~sG~~~~~~~g~~~  334 (369)
                      ...     ........|+++ +.+|+|+|+.+++++.. +...+|+.+.+|+|-..
T Consensus       210 ~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         210 AGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             hccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence            011     111222345554 89999999999965532 12569999999998754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=4.4e-34  Score=257.22  Aligned_cols=238  Identities=18%  Similarity=0.192  Sum_probs=185.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch-HHHHHHHHHhhcCCCcEEEEEecCCC----hHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSS----FQSVLKFKDSLQQ  138 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dls~----~~~i~~~~~~i~~  138 (369)
                      +++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+.. +.+.....+|..+    .+.++++++++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999998654 567778887765 4466677666554    4566777777777


Q ss_pred             HHhccCCCCCccEEEeccccccCCC-------------CCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC----CCCeE
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSS-------------RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----VPSRI  201 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~-------------~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~----~~g~I  201 (369)
                            +++++|+||||||+..+..             +...+.+...+.+|+.+++...+...+.+....    ..+.+
T Consensus        81 ------~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (266)
T d1mxha_          81 ------AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV  154 (266)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred             ------HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccc
Confidence                  5689999999999864322             123455677889999999999998888775432    24688


Q ss_pred             EEEcCCcccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017580          202 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR  281 (369)
Q Consensus       202 V~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~  281 (369)
                      ++++|..+.                    .+.++...|++||+|++++++++++|++   +.|||||+|+||+++|++..
T Consensus       155 ~~~~~~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I~PG~i~t~~~~  211 (266)
T d1mxha_         155 VNLCDAMTD--------------------LPLPGFCVYTMAKHALGGLTRAAALELA---PRHIRVNAVAPGLSLLPPAM  211 (266)
T ss_dssp             EEECCGGGG--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBSCCSSS
T ss_pred             hhhhhcccc--------------------ccCcchhhhhhhHHHHhhhHHHHHHHhC---ccCcEEEEeccCcEeccccC
Confidence            899998877                    7788999999999999999999999998   89999999999999998764


Q ss_pred             cchhHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017580          282 EVPSFLSLMAFTVLKLLGL-LQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  334 (369)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~-~~~~~e~A~~v~~~~l~~-~~~sG~~~~~~~g~~~  334 (369)
                      ....   ........|++| +.+|||+|+++++++... ...+|+.+.+|+|..+
T Consensus       212 ~~~~---~~~~~~~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         212 PQET---QEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             CHHH---HHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHH---HHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            4211   122333346655 479999999999655432 3579999999998765

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.97  E-value=3.1e-31  Score=237.30  Aligned_cols=235  Identities=18%  Similarity=0.180  Sum_probs=163.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+||||||++|||+++|++|+++|++|++++|++++                   ..+|+++.+..+....++...    
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~----   58 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAK----   58 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTT----
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHH----
Confidence            799999999999999999999999999999997542                   257899988888776655431    


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc--
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET--  221 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~--  221 (369)
                       ..+.+|++|||||+...     .+.++....+|..+...+.+...|.+.+.. .+.+.++++...............  
T Consensus        59 -~~~~id~lv~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (257)
T d1fjha_          59 -CSKGMDGLVLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             -CTTCCSEEEECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             -hCCCCcEEEEcCCCCCc-----HHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhc
Confidence             45679999999997532     345778899999999999999999988776 567777776544321111000000  


Q ss_pred             cccc------cccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-
Q 017580          222 ITGK------FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-  294 (369)
Q Consensus       222 ~~~~------~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-  294 (369)
                      ..+.      ........++..+|++||+|+++|+|+|+.|++   ++|||||+|+||+|+|++.+............. 
T Consensus       132 ~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  208 (257)
T d1fjha_         132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG---EAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK  208 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH---HTTCEEEEEEECC---------------------
T ss_pred             cCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccc---cccccccccccCCcCChhHHhhcCCHHHHHHHHh
Confidence            0000      000112344567899999999999999999998   899999999999999999876433222221111 


Q ss_pred             -HHHhhCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017580          295 -LKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  333 (369)
Q Consensus       295 -~~~~~~~~~~~e~A~~v~~~~l~~~---~~sG~~~~~~~g~~  333 (369)
                       ..|++|+.+|+|+|+.+++  |.++   ..+|+.+.+|+|..
T Consensus       209 ~~~PlgR~g~p~eva~~v~f--L~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         209 FVPPMGRRAEPSEMASVIAF--LMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             CCCSTTSCCCTHHHHHHHHH--HTSGGGTTCCSCEEEESTTHH
T ss_pred             cCCCCCCCcCHHHHHHHHHH--HhCchhCCccCceEEeCCCcc
Confidence             2488999999999999994  4444   57899999999864

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=4.3e-30  Score=230.17  Aligned_cols=209  Identities=21%  Similarity=0.200  Sum_probs=162.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc---chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++++.  +.++.++.||++|.++++++++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhccccc
Confidence            56999999999999999999999999 799999974   4456666666554  67899999999999999999988754


Q ss_pred             HHhccCCCCCccEEEecccccc--CCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  216 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~  216 (369)
                             .+++|.+|||||+..  +..+.+.+.++.++++|+.+++++.+.+.+    .+ .++||++||.++.      
T Consensus        87 -------~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~~-~~~iv~~SS~a~~------  148 (259)
T d2fr1a1          87 -------DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD-LTAFVLFSSFASA------  148 (259)
T ss_dssp             -------TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-CSEEEEEEEHHHH------
T ss_pred             -------cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc----cC-CceEeeecchhhc------
Confidence                   468999999999874  445789999999999999999998876533    22 5899999999998      


Q ss_pred             CCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccchhHHHHHHHHHH
Q 017580          217 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVPSFLSLMAFTVL  295 (369)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~  295 (369)
                                    .+.++.+.|++||++++.|++.++       ..|+++++|+||.+.++ |...... ..    ...
T Consensus       149 --------------~g~~~~~~YaAaka~l~~la~~~~-------~~Gi~v~~I~pg~~~~~g~~~~~~~-~~----~~~  202 (259)
T d2fr1a1         149 --------------FGAPGLGGYAPGNAYLDGLAQQRR-------SDGLPATAVAWGTWAGSGMAEGPVA-DR----FRR  202 (259)
T ss_dssp             --------------TCCTTCTTTHHHHHHHHHHHHHHH-------HTTCCCEEEEECCBC-----------------CTT
T ss_pred             --------------cCCcccHHHHHHHHhHHHHHHHHH-------hCCCCEEECCCCcccCCccccchHH-HH----HHh
Confidence                          788899999999999998877665       46899999999988644 4322100 00    000


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCC
Q 017580          296 KLLGLLQSPEKGINSVLDAALAP  318 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~  318 (369)
                      ..+ ...+|+++++.+..++...
T Consensus       203 ~G~-~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         203 HGV-IEMPPETACRALQNALDRA  224 (259)
T ss_dssp             TTE-ECBCHHHHHHHHHHHHHTT
T ss_pred             cCC-CCCCHHHHHHHHHHHHhCC
Confidence            001 2458999999988766544

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.8e-19  Score=167.86  Aligned_cols=235  Identities=11%  Similarity=0.060  Sum_probs=153.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-----hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-----~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      |+||||||||.||.+++++|+++|++|++++|...     +++.+..+...  ...++.++++|++|.+++++++++.  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT--CNPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh--cCCCeEEEEeecCCHHHHHHHHhcc--
Confidence            78999999999999999999999999999999543     22332222211  2457999999999999999887753  


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc-cccC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF-NAQV  217 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~-~~~~  217 (369)
                               .+|+++|.|+.....  .+.++.+..+++|+.|+.+++.++...-.+.  ..|+|++||...+... ..++
T Consensus        78 ---------~~d~v~h~aa~~~~~--~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~--~~r~i~~SS~~vYG~~~~~~~  144 (357)
T d1db3a_          78 ---------QPDEVYNLGAMSHVA--VSFESPEYTADVDAMGTLRLLEAIRFLGLEK--KTRFYQASTSELYGLVQEIPQ  144 (357)
T ss_dssp             ---------CCSEEEECCCCCTTT--TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGGTTCCSSSB
T ss_pred             ---------CCCEEEEeecccccc--hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC--CcEEEEEEchhhhCCCCCCCc
Confidence                     389999999986432  2335567789999999999998875542222  3589999997654221 1111


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                      ++          ..+..+...|+.||.+.+.+++..++.+      ++.+..+.|+.+-.|...................
T Consensus       145 ~E----------~~~~~P~~~Y~~sK~~~E~~~~~~~~~~------~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~  208 (357)
T d1db3a_         145 KE----------TTPFYPRSPYAVAKLYAYWITVNYRESY------GMYACNGILFNHESPRRGETFVTRKITRAIANIA  208 (357)
T ss_dssp             CT----------TSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHH
T ss_pred             CC----------CCCCCCCChHHHHHHHHHHHHHHHHHHh------CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHH
Confidence            11          1344456789999999999999998865      4778889999888875432211111111111111


Q ss_pred             h--------------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017580          298 L--------------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  334 (369)
Q Consensus       298 ~--------------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~  334 (369)
                      .              +-+..++|+|++++.+ +.. ...+.|.. ..|++.
T Consensus       209 ~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~-~~~-~~~~~yni-~sg~~~  256 (357)
T d1db3a_         209 QGLESCLYLGNMDSLRDWGHAKDYVKMQWMM-LQQ-EQPEDFVI-ATGVQY  256 (357)
T ss_dssp             TTSCCCEEESCTTCEECCEEHHHHHHHHHHT-TSS-SSCCCEEE-CCCCCE
T ss_pred             hCCCceEEECCCCeeecceeechHHHHHHHH-HhC-CCCCeEEE-CCCCce
Confidence            1              1246699999999843 332 33344444 444443

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.81  E-value=2.8e-21  Score=164.19  Aligned_cols=154  Identities=13%  Similarity=0.082  Sum_probs=116.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+++||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++....   ++....+|+++.+++++++     
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~-----   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAV-----   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHT-----
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccHHHHHHHh-----
Confidence            47899999999999999999999999999999999999999999998887643   4567889999988876542     


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                              +++|+||||||+.  ....+.+.|+..+++|+.+.++.+..+.+.+....  .....+++.....       
T Consensus        91 --------~~iDilin~Ag~g--~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g-------  151 (191)
T d1luaa1          91 --------KGAHFVFTAGAIG--LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT--DKGKEYGGKRAFG-------  151 (191)
T ss_dssp             --------TTCSEEEECCCTT--CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT--CEEEEETTEEEEC-------
T ss_pred             --------cCcCeeeecCccc--cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc--cCcEEecceEEEe-------
Confidence                    4699999999974  34678999999999999888776555544433322  2333333333220       


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSY  251 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  251 (369)
                                  ....+...|+++|+++..+++
T Consensus       152 ------------~~~~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         152 ------------ALGIGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHTS
T ss_pred             ------------ccCcCcHHHHHHHHHHHHHHh
Confidence                        011234579999999887663

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.80  E-value=2.7e-18  Score=158.74  Aligned_cols=242  Identities=14%  Similarity=0.088  Sum_probs=159.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +||+||||||+|.||.+++++|+++|++|+++.|+.++...+...............+..|+++.+++.+++        
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------   81 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--------   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc--------
Confidence            489999999999999999999999999999999998877666554444443445566778999988765432        


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC---
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN---  218 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~---  218 (369)
                           ..+|+++|+|+....  ..+   ....+..|+.|+.++++.+...    +.-.++|++||..+.........   
T Consensus        82 -----~~~~~v~~~a~~~~~--~~~---~~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~~~~~~~~~~~~~~~  147 (342)
T d1y1pa1          82 -----KGAAGVAHIASVVSF--SNK---YDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             -----TTCSEEEECCCCCSC--CSC---HHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             -----ccchhhhhhcccccc--ccc---ccccccchhhhHHHHHHhhhcc----cccccccccccceeeccCCCCCCCcc
Confidence                 348999999987532  222   3456788999999888876443    12469999999765432211111   


Q ss_pred             --Ccccc------cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hh-HH
Q 017580          219 --NETIT------GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PS-FL  287 (369)
Q Consensus       219 --~~~~~------~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~--~~-~~  287 (369)
                        .....      .....+..+..+...|+.||.+.+.+++.++++.    ..++++.+++|+.+-.|.....  .. ..
T Consensus       148 ~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~  223 (342)
T d1y1pa1         148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN----KPHFTLNAVLPNYTIGTIFDPETQSGSTS  223 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH----CCSSEEEEEEESEEECCCSCTTTCCCHHH
T ss_pred             ccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhc----ccccccceecccceeCCCCCccccccchH
Confidence              11000      0012223556677899999999999999998887    4678888999988866543211  11 11


Q ss_pred             HHHHHHH------HH---HhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017580          288 SLMAFTV------LK---LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  330 (369)
Q Consensus       288 ~~~~~~~------~~---~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~  330 (369)
                      .......      ..   ....+..++|+|++.+.++. .+...|.+++..+
T Consensus       224 ~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~-~~~~~g~~~~~~~  274 (342)
T d1y1pa1         224 GWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLV-LPQIERRRVYGTA  274 (342)
T ss_dssp             HHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHH-CTTCCSCEEEECC
T ss_pred             HHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhc-CccccceEEEEcC
Confidence            1110000      00   00114678999999875544 4455677776543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=2.4e-16  Score=148.17  Aligned_cols=194  Identities=13%  Similarity=0.106  Sum_probs=133.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC----------------cchHHHHHHHHHhhcCCCcEEEEEecCCCh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS----------------SHLLSETMADITSRNKDARLEAFQVDLSSF  126 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~----------------~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~  126 (369)
                      |+.||||||+|.||.+++++|+++|++|++++.-                .....+......... +.++.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            6789999999999999999999999999998621                111122222222221 45789999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCccEEEeccccccC-CCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017580          127 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  205 (369)
Q Consensus       127 ~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vs  205 (369)
                      +.++++++..           ++|+++|.|+.... ....+++.....+++|+.|+.++++.+...-.    ..++++.|
T Consensus        80 ~~l~~~~~~~-----------~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~----~~~~i~~s  144 (393)
T d1i24a_          80 EFLAESFKSF-----------EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE----ECHLVKLG  144 (393)
T ss_dssp             HHHHHHHHHH-----------CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEC
T ss_pred             HHHHHHHHhh-----------cchheeccccccccccccccccccccccccccccccHHHHHHHHhcc----ccceeecc
Confidence            9998887753           48999999987532 23456677788999999999999988754421    24677777


Q ss_pred             CCcccccccccCCCcc----cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          206 SFTHRNVFNAQVNNET----ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       206 S~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                      |.........+.....    ..+.......+..+...|+.||.+.+.+++.++++.      ++.+.++.|+.+..+
T Consensus       145 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~------~l~~~~lR~~~v~G~  215 (393)
T d1i24a_         145 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW------GIRATDLNQGVVYGV  215 (393)
T ss_dssp             CGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECS
T ss_pred             ccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc------ceeeeecccccccCC
Confidence            7665433222111100    000011112344556789999999999999888765      578899999877654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=8.6e-17  Score=148.46  Aligned_cols=223  Identities=9%  Similarity=0.017  Sum_probs=145.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-----hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-----~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      |+||||||+|.||.+++++|.++|++|+.++|..+     +++....... .....++.++.+|++|.+.+.+++++.  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQ-AHIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchh-hhccCCcEEEEeecCCchhhHHHHhhc--
Confidence            55699999999999999999999999999999643     2222211111 112457899999999999998887653  


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                               .++++++.|+....  ..+.+.....+++|+.|+.+++.++...-...  ..++|++||.+.+.... ..+
T Consensus        79 ---------~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~--~~~~i~~SS~~vyg~~~-~~~  144 (347)
T d1t2aa_          79 ---------KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSELYGKVQ-EIP  144 (347)
T ss_dssp             ---------CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGTCSCS-SSS
T ss_pred             ---------ccceeeeeeecccc--chhhccchhhhhhHHHHHHHHHHHHHHcCCCC--CcEEEEecchheecCCC-CCC
Confidence                     37788888875321  22344556678999999999998876653332  25899999976542211 111


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  298 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  298 (369)
                              ..+..+..+...|+.||.+.+.+++..++++      ++.+..+.|+.+..|-...................
T Consensus       145 --------~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~------~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~  210 (347)
T d1t2aa_         145 --------QKETTPFYPRSPYGAAKLYAYWIVVNFREAY------NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYL  210 (347)
T ss_dssp             --------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHH
T ss_pred             --------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEEecceeCCCCCCCccccccceeeehhhc
Confidence                    1112445566789999999999999988765      56788888887776632221111111111111111


Q ss_pred             --------------hCCCCHHHHHHHHHHHhcC
Q 017580          299 --------------GLLQSPEKGINSVLDAALA  317 (369)
Q Consensus       299 --------------~~~~~~~e~A~~v~~~~l~  317 (369)
                                    +.+...+|++++++.++..
T Consensus       211 ~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         211 GQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             TSCSCEEESCTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             CCcceeecCCCcceeeeeEecHHHHHHHHHhhc
Confidence                          1246789999999966544

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.72  E-value=4.2e-17  Score=151.84  Aligned_cols=248  Identities=11%  Similarity=0.076  Sum_probs=159.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEE-EeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      .||||||+|.||.+++++|+++|++|++ +++..... . ...+.......++.++.+|++|.+++.++++..       
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~-~-~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-------   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-N-LESLSDISESNRYNFEHADICDSAEITRIFEQY-------   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-C-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-------
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc-c-HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-------
Confidence            4899999999999999999999997554 44322111 0 111222223458999999999999988877643       


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCC----CCCeEEEEcCCccccccccc-CC
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----VPSRIVNVTSFTHRNVFNAQ-VN  218 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~----~~g~IV~vsS~~~~~~~~~~-~~  218 (369)
                          .+|++||+|+....  ..+.++.++++++|+.|+..+++.+........    ...++|++||...+...... ..
T Consensus        73 ----~~d~VihlAa~~~~--~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  146 (361)
T d1kewa_          73 ----QPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEV  146 (361)
T ss_dssp             ----CCSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGS
T ss_pred             ----CCCEEEECccccch--hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcc
Confidence                48999999986432  123345567899999999999999877654321    13589999998876443211 11


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH-HHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT-VLKL  297 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~  297 (369)
                      .+........+..+..+...|+.||.+.+.+++..+..+      ++.+.++.|+.|-.|............... ...+
T Consensus       147 ~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~------~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~  220 (361)
T d1kewa_         147 ENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY------GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKP  220 (361)
T ss_dssp             CTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCC
T ss_pred             ccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCC
Confidence            111111111122445567789999999999999998765      578889999988877543211111111111 1111


Q ss_pred             h---h------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          298 L---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       298 ~---~------~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      +   +      .+...+|+|++++.++... .. |..|+.+.|++..
T Consensus       221 ~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~-~~-~~~~Ni~s~~~~s  265 (361)
T d1kewa_         221 LPIYGKGDQIRDWLYVEDHARALHMVVTEG-KA-GETYNIGGHNEKK  265 (361)
T ss_dssp             EEEETTSCCEEEEEEHHHHHHHHHHHHHHC-CT-TCEEEECCCCEEE
T ss_pred             cEEeCCCCeEEeCEEHHHHHHHHHHHHhcC-CC-CCeEEECCCCCcc
Confidence            1   1      1357999999999655443 33 4556656666554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=1.7e-16  Score=145.84  Aligned_cols=225  Identities=13%  Similarity=0.004  Sum_probs=148.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-----hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-----~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .|+||||||||.||.+++++|+++|++|+.++|..+     +...+....... ....+.++.+|+++.+++.+.++.  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~--   77 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASSLRRWIDV--   77 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCHHHHHHHHhh--
Confidence            389999999999999999999999999999998532     222222221111 145788999999999988887764  


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                               .++|++||.|+....  ..+.+.....+.+|+.++..+..++...........+++..||...........
T Consensus        78 ---------~~~D~Vih~Aa~~~~--~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~  146 (339)
T d1n7ha_          78 ---------IKPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQ  146 (339)
T ss_dssp             ---------HCCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSB
T ss_pred             ---------hccchhhhccccccc--cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCC
Confidence                     358999999987422  123355667889999999999888876544432234566666554332222222


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  297 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  297 (369)
                      .+          ..+..+...|+.||.+.+.++...++..      ++.+..+.|+.|-.|...................
T Consensus       147 ~E----------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~  210 (339)
T d1n7ha_         147 SE----------TTPFHPRSPYAASKCAAHWYTVNYREAY------GLFACNGILFNHESPRRGENFVTRKITRALGRIK  210 (339)
T ss_dssp             CT----------TSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHH
T ss_pred             CC----------CCCCCCcchhhHHHHHHHHHHHHHHHHh------CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHh
Confidence            21          2455667899999999999999888765      5889999999887775432211111111111111


Q ss_pred             hh--------------CCCCHHHHHHHHHHHhcC
Q 017580          298 LG--------------LLQSPEKGINSVLDAALA  317 (369)
Q Consensus       298 ~~--------------~~~~~~e~A~~v~~~~l~  317 (369)
                      .+              .+...+|+|+.+..++..
T Consensus       211 ~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~  244 (339)
T d1n7ha_         211 VGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ  244 (339)
T ss_dssp             HTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred             cCCCCeEEeCCCCccccceeeehHHHHHHHHHhc
Confidence            11              145699999999865444

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=3.2e-16  Score=144.31  Aligned_cols=182  Identities=14%  Similarity=0.059  Sum_probs=130.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      ||||||+|.||.+++++|+++|++|++++|................ ..++.++++|++|.+.+.++++.          
T Consensus         3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~----------   71 (338)
T d1udca_           3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHD----------   71 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHH----------
T ss_pred             EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc-CCCCEEEEeecCCHHHHHHHHhc----------
Confidence            9999999999999999999999999999873322222222221111 45789999999999988777764          


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  225 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  225 (369)
                       .++|++||.|+....  ..+.+..++.+++|+.|+..+++++...-     -.++|++||.+.+...+.....+.    
T Consensus        72 -~~~d~ViHlAa~~~~--~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-----v~~~i~~Ss~~vy~~~~~~~~~e~----  139 (338)
T d1udca_          72 -HAIDTVIHFAGLKAV--GESVQKPLEYYDNNVNGTLRLISAMRAAN-----VKNFIFSSSATVYGDQPKIPYVES----  139 (338)
T ss_dssp             -TTCSEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCSCCSSSBCTT----
T ss_pred             -cCCCEEEECCCccch--hhHHhCHHHHHHhHHHHHHHHHHHHHHhC-----CCEEEecCcceEEccccccccccc----
Confidence             358999999986421  12334566899999999999999876541     358999999776533222111110    


Q ss_pred             cccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          226 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       226 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                          .....+...|+.+|.+.+.+++....+.     .++.+..++|+.+-.+.
T Consensus       140 ----~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         140 ----FPTGTPQSPYGKSKLMVEQILTDLQKAQ-----PDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             ----SCCCCCSSHHHHHHHHHHHHHHHHHHHS-----TTCEEEEEEECEEECCC
T ss_pred             ----cccCCCcchHHHHHhhhhHHHHHHHhhc-----cCCeEEEEeeccEEecc
Confidence                1233456789999999999998877764     46788888888876653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=5.6e-16  Score=141.35  Aligned_cols=235  Identities=12%  Similarity=-0.013  Sum_probs=151.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |+||||||+|.||++++++|+++|++|+.++|......  ...+.......++.++.+|++|.+++.+.....       
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-------   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-------   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-------
Confidence            68999999999999999999999999999998754311  122222223457999999999999888776653       


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                          ..++++++|+.....  ...+.....+++|+.|+..++.++...-.    ..++++.||............     
T Consensus        72 ----~~~~~~~~a~~~~~~--~~~~~~~~~~~~n~~g~~~~l~~~~~~~~----~~~~i~~Ss~~~~~~~~~~~~-----  136 (321)
T d1rpna_          72 ----QPQEVYNLAAQSFVG--ASWNQPVTTGVVDGLGVTHLLEAIRQFSP----ETRFYQASTSEMFGLIQAERQ-----  136 (321)
T ss_dssp             ----CCSEEEECCSCCCHH--HHTTSHHHHHHHHTHHHHHHHHHHHHHCT----TSEEEEEEEGGGGCSCSSSSB-----
T ss_pred             ----ccccccccccccccc--ccccchHHHHhhhhhchHHHHHHHHHhCC----CcccccccchhhcCcccCCCC-----
Confidence                367788887754221  11234567899999999999887755321    246777777554322111111     


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh-----
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-----  298 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-----  298 (369)
                          .+..+..+...|+.||.+.+.+++.++.+.      ++.+..+.|+.+..|....................     
T Consensus       137 ----~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~  206 (321)
T d1rpna_         137 ----DENTPFYPRSPYGVAKLYGHWITVNYRESF------GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQE  206 (321)
T ss_dssp             ----CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSC
T ss_pred             ----CCCCCccccChhHHHHHHHHHHHHHHHhhc------CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCc
Confidence                112445566789999999999999998765      46788888887776653221111111111111111     


Q ss_pred             ---h------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          299 ---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ---~------~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                         +      .+...+|+|++++.++..+.  .|.|... .+....
T Consensus       207 i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~~~~ni~-~~~~~s  249 (321)
T d1rpna_         207 LRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADDYVVA-TGVTTT  249 (321)
T ss_dssp             EEESCTTCEEECEEHHHHHHHHHHHHHSSS--CCCEEEC-CSCEEE
T ss_pred             EEECCCCeEEccEEeHHHHHHHHHHHhcCC--cCCceec-ccccce
Confidence               1      24679999999997654443  3455443 344443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=2.6e-16  Score=145.48  Aligned_cols=184  Identities=16%  Similarity=0.116  Sum_probs=130.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch-HHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |+||||||+|.||.+++++|+++|++|+++++.... ..... ..... ...++.++.+|++|.+++++++..       
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~-------   72 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA-RLEVL-TKHHIPFYEVDLCDRKGLEKVFKE-------   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH-HHHHH-HTSCCCEEECCTTCHHHHHHHHHH-------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH-hHHhh-cccCCeEEEeecCCHHHHHHHHhc-------
Confidence            789999999999999999999999999998763221 11111 11111 145788999999999998887763       


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  222 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  222 (369)
                          .++|++||.|+.....  ...+..+....+|+.++..+++++...-     -.++|++||...+............
T Consensus        73 ----~~~d~VihlAa~~~~~--~~~~~~~~~~~~N~~~t~~ll~~~~~~~-----i~~~i~~SS~~vyg~~~~~~~~~~~  141 (347)
T d1z45a2          73 ----YKIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQYN-----VSKFVFSSSATVYGDATRFPNMIPI  141 (347)
T ss_dssp             ----SCCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             ----cCCCEEEEcccccccc--ccccCcccccccchhhhHHHHHHHHhcc-----cceEEeecceeeecCcccCCCCCcc
Confidence                3599999999975321  1234446788899999999999875431     2589999998876433222111111


Q ss_pred             ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc
Q 017580          223 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  276 (369)
Q Consensus       223 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~  276 (369)
                      ..     ..+..+...|+.||.+.+.+++.+.+..    ..++.+..+.|+.+-
T Consensus       142 ~e-----~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~~lR~~~v~  186 (347)
T d1z45a2         142 PE-----ECPLGPTNPYGHTKYAIENILNDLYNSD----KKSWKFAILRYFNPI  186 (347)
T ss_dssp             CT-----TSCCCCCSHHHHHHHHHHHHHHHHHHHS----TTSCEEEEEEECEEE
T ss_pred             cc-----ccCCCCCChhHhHHHHHHHHHHHHHHhh----ccCCcEEEEeecceE
Confidence            11     1444556789999999999999988765    467778877776554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.68  E-value=2.2e-15  Score=138.73  Aligned_cols=239  Identities=11%  Similarity=0.019  Sum_probs=153.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHh---hcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS---RNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~---~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +-|++|||||||.||.+++++|.++|++|++++|....-......+..   ......+.++..|+.|........     
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-----   89 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-----   89 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc-----
Confidence            358999999999999999999999999999998733221222222211   111346899999999987644321     


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                              ...+.++|.++....  ..+.+.....+++|+.|+..+++++...    + ..++|++||...+...+....
T Consensus        90 --------~~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~~  154 (341)
T d1sb8a_          90 --------AGVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLPK  154 (341)
T ss_dssp             --------TTCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSB
T ss_pred             --------ccccccccccccccc--cccccCccchhheeehhHHHHHHHHHhc----C-CceEEEcccceeeCCCCCCCc
Confidence                    346778877765321  1235666789999999999998887543    2 359999999887643221111


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---HHHHHHHHHH
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---FLSLMAFTVL  295 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~  295 (369)
                      .         +..+..+.+.|+.||.+.+.+++.+++..      ++++..+.|+.+-++.......   ..........
T Consensus       155 ~---------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~  219 (341)
T d1sb8a_         155 V---------EDTIGKPLSPYAVTKYVNELYADVFSRCY------GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMI  219 (341)
T ss_dssp             C---------TTCCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHH
T ss_pred             c---------CCCCCCCCCcchHHHHHHHHHHHHHHHHh------CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHH
Confidence            1         12445567789999999999999998765      5778888998887654322111   1111100110


Q ss_pred             --HHh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          296 --KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       296 --~~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                        .+.         +.+..++|+|.++..++.......|..|....+....
T Consensus       220 ~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~s  270 (341)
T d1sb8a_         220 QGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTS  270 (341)
T ss_dssp             HTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEE
T ss_pred             cCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeecccccch
Confidence              011         1245679999998866655544556556555445443

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=1.3e-14  Score=133.31  Aligned_cols=231  Identities=10%  Similarity=0.106  Sum_probs=150.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      .||||||+|.||.+++++|+++| ++|+++++..+......       ...++.++++|+++.+++.+.+.  .      
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~--~------   66 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHV--K------   66 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHH--H------
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHH--h------
Confidence            48999999999999999999999 48999888654432221       24579999999998877655332  1      


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                          .+|++||+|+.....  ...+.....+++|+.|+..+++.+...      ..+.+++||...+.........+...
T Consensus        67 ----~~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~------~~~~~~~ss~~~~~~~~~~~~~~~~~  134 (342)
T d2blla1          67 ----KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY------RKRIIFPSTSEVYGMCSDKYFDEDHS  134 (342)
T ss_dssp             ----HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT------TCEEEEECCGGGGBTCCCSSBCTTTC
T ss_pred             ----CCCcccccccccccc--ccccCCccccccccccccccccccccc------cccccccccccccccccccccccccc
Confidence                289999999975321  123445678999999999999886332      25777888877664433222211111


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHHHHHHHHHH-
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFLSLMAFTVL-  295 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~-  295 (369)
                      ..  .......+...|+.||.+.+.+++..+++.      ++.+..+.|..+..+.....       ............ 
T Consensus       135 ~~--~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (342)
T d2blla1         135 NL--IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE------GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE  206 (342)
T ss_dssp             CC--BCCCTTCGGGHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH
T ss_pred             cc--cccccCCCcchhhhcccchhhhhhhhhccc------CceeEEeeccccccccccccccccccccccchHHHHHHHh
Confidence            11  111334566799999999999999998875      56777888877765432211       111111100000 


Q ss_pred             -HH---h------hCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCC
Q 017580          296 -KL---L------GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGK  330 (369)
Q Consensus       296 -~~---~------~~~~~~~e~A~~v~~~~l~~~-~~sG~~~~~~~  330 (369)
                       .+   .      +.+...+|+|+++..++.... ...|..|..+.
T Consensus       207 g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~  252 (342)
T d2blla1         207 GSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN  252 (342)
T ss_dssp             TCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             CCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEec
Confidence             00   0      125689999999997766543 45577776543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.2e-15  Score=133.68  Aligned_cols=228  Identities=12%  Similarity=0.027  Sum_probs=142.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |.||||||+|.||++++++|+++|++|++++|... ..+.    +.......++.....|+.+.                
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~----------------   61 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN----VEHWIGHENFELINHDVVEP----------------   61 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG----TGGGTTCTTEEEEECCTTSC----------------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH----HHHhcCCCceEEEehHHHHH----------------
Confidence            78999999999999999999999999999987322 1111    11111133455555555432                


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-ccCCCcc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNET  221 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~-~~~~~~~  221 (369)
                        ...++|++||.|+.....  .+.++.++.+++|+.++..+++++...    +  .++|++||.+.+.... .+..++.
T Consensus        62 --~~~~~d~VihlAa~~~~~--~~~~~~~~~~~~Nv~g~~~ll~~~~~~----~--~k~I~~SS~~vy~~~~~~~~~e~~  131 (312)
T d2b69a1          62 --LYIEVDQIYHLASPASPP--NYMYNPIKTLKTNTIGTLNMLGLAKRV----G--ARLLLASTSEVYGDPEVHPQSEDY  131 (312)
T ss_dssp             --CCCCCSEEEECCSCCSHH--HHTTCHHHHHHHHHHHHHHHHHHHHHH----T--CEEEEEEEGGGGBSCSSSSBCTTC
T ss_pred             --HHcCCCEEEECcccCCch--hHHhCHHHHHHHHHHHHHHHHHHHHHc----C--CcEEEEEChheecCCCCCCCCccc
Confidence              234699999999875321  112345678999999999999876432    2  4899999976653321 1222211


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHH-HHHHHH-HHHHh
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFL-SLMAFT-VLKLL  298 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~-~~~~~~-~~~~~  298 (369)
                      .     ....+..+...|+.||.+.+.+++..++++      ++.+..++|+.|-.|...... ... ...... ...+.
T Consensus       132 ~-----~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i  200 (312)
T d2b69a1         132 W-----GHVNPIGPRACYDEGKRVAETMCYAYMKQE------GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPL  200 (312)
T ss_dssp             C-----CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCE
T ss_pred             c-----CCCCCCCCccHHHHHHHHHHHHHHHHHHHh------CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCe
Confidence            1     112455667889999999999999998865      578999999999876433211 111 111100 00110


Q ss_pred             ---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          299 ---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                               +-+...+|+|++++.++ .. ...|.| ....|....
T Consensus       201 ~i~~~g~~~r~~i~v~D~~~~~~~~~-~~-~~~~~~-n~~~~~~~~  243 (312)
T d2b69a1         201 TVYGSGSQTRAFQYVSDLVNGLVALM-NS-NVSSPV-NLGNPEEHT  243 (312)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHH-TS-SCCSCE-EESCCCEEE
T ss_pred             EEeCCCCeeEccEEHHHHHHHHHHHH-hh-ccCCce-EecCCcccc
Confidence                     12356899999998544 32 334555 444455554

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.62  E-value=2.1e-15  Score=139.21  Aligned_cols=237  Identities=13%  Similarity=0.064  Sum_probs=144.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      +.||||||||.||.+++++|.++|+.|.+++++...-..-...+ ....+.++.++.+|++|.+.+.+++.         
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~~~~~~~~~---------   72 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAA---------   72 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHT---------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCHHHHHHHHh---------
Confidence            57999999999999999999999986544443210000000001 11224689999999999888776543         


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc--CC-Cc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ--VN-NE  220 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~--~~-~~  220 (369)
                          ..+.++|.|+.....  ....+.++.+++|+.|+.+++......      ..++|++||...+...+..  .. ..
T Consensus        73 ----~~~~v~~~a~~~~~~--~~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vyg~~~~~~~~~~~~  140 (346)
T d1oc2a_          73 ----KADAIVHYAAESHND--NSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVYGDLPLREDLPGHG  140 (346)
T ss_dssp             ----TCSEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred             ----hhhhhhhhhhccccc--chhhCcccceeeehHhHHhhhhhhccc------cccccccccceEecccCccccccccc
Confidence                367788888765321  122345678999999999998876444      2478888887655322110  00 00


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH-H--
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK-L--  297 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~--  297 (369)
                      ......+....+..+.+.|+.||.+.+.+++...++.      ++++.++.|+.|-.|-................. +  
T Consensus       141 ~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~------~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~  214 (346)
T d1oc2a_         141 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF------GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPK  214 (346)
T ss_dssp             CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCE
T ss_pred             cCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc------CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCcee
Confidence            0111112222445556789999999999999888764      689999999998876432211111111111110 0  


Q ss_pred             -h------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017580          298 -L------GLLQSPEKGINSVLDAALAPPETSGVYFFGG  329 (369)
Q Consensus       298 -~------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~  329 (369)
                       .      +.+...+|+|++++.+.. .+...+.|+...
T Consensus       215 i~~~g~~~r~~i~v~D~a~a~~~~~~-~~~~~~~~~~~~  252 (346)
T d1oc2a_         215 LYGEGKNVRDWIHTNDHSTGVWAILT-KGRMGETYLIGA  252 (346)
T ss_dssp             EETTSCCEEECEEHHHHHHHHHHHHH-HCCTTCEEEECC
T ss_pred             EeCCCCccccccchhhHHHHHHHHHh-hcccCccccccc
Confidence             0      124678999999885443 334444554433

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.5e-14  Score=133.31  Aligned_cols=183  Identities=15%  Similarity=0.135  Sum_probs=127.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeC------CcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGR------SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r------~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      |.||||||+|.||.+++++|+++|++|+++++      +........+.+... .+.++.++.+|++|.+++.+++..  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeeccccccccccccc--
Confidence            67999999999999999999999999999864      222222222222221 145789999999999988776653  


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  217 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~  217 (369)
                               ..+++++|.|+....  ..+.+...+.+++|+.|+..++.++...    + -.+++++||...+.......
T Consensus        80 ---------~~~~~i~h~Aa~~~~--~~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~-v~~~i~~ss~~~~~~~~~~~  143 (346)
T d1ek6a_          80 ---------YSFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMKAH----G-VKNLVFSSSATVYGNPQYLP  143 (346)
T ss_dssp             ---------CCEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCSCSSSS
T ss_pred             ---------cccccccccccccCc--HhhHhCHHHHHHhhhcccccccchhhhc----C-cccccccccceeeecccccc
Confidence                     458899999997532  2223445678999999999988876432    2 35899999877664332221


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                      ....        .........|+.+|.+.+..++.+++.     ..++....+.|+.+.++
T Consensus       144 ~~~~--------~~~~~~~~~Y~~~k~~~e~~~~~~~~~-----~~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         144 LDEA--------HPTGGCTNPYGKSKFFIEEMIRDLCQA-----DKTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             BCTT--------SCCCCCSSHHHHHHHHHHHHHHHHHHH-----CTTCEEEEEEECEEECC
T ss_pred             cccc--------ccccccCChHHHHHHHHHHHHHHHHHh-----ccCCceEEEeecceecc
Confidence            1110        012234457999999999998887764     34677888888776554

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.4e-15  Score=128.42  Aligned_cols=196  Identities=15%  Similarity=0.026  Sum_probs=126.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ..|.|+||||||+||.+++++|+++|++|++++|+++++...        ....++++.+|++|.+++.++++       
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc-------
Confidence            457899999999999999999999999999999998764321        14568899999999988766543       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                            +.|++|+++|...+...         .+++..++.+++++    +++.+ -.|+|++||.......        
T Consensus        67 ------~~d~vi~~~g~~~~~~~---------~~~~~~~~~~l~~a----a~~~~-v~r~i~~ss~~~~~~~--------  118 (205)
T d1hdoa_          67 ------GQDAVIVLLGTRNDLSP---------TTVMSEGARNIVAA----MKAHG-VDKVVACTSAFLLWDP--------  118 (205)
T ss_dssp             ------TCSEEEECCCCTTCCSC---------CCHHHHHHHHHHHH----HHHHT-CCEEEEECCGGGTSCT--------
T ss_pred             ------CCCEEEEEeccCCchhh---------hhhhHHHHHHHHHH----HHhcC-CCeEEEEeeeeccCCC--------
Confidence                  37999999997533211         13344455444444    44443 4699999986654110        


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-cchhHHHHHHHHHHHHhhC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-EVPSFLSLMAFTVLKLLGL  300 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~~~~  300 (369)
                              ....+....|...|.+.+.+.       .   ..++..+.|.||.+...-.. .......      ......
T Consensus       119 --------~~~~~~~~~~~~~~~~~e~~l-------~---~~~~~~tiirp~~~~~~~~~~~~~~~~~------~~~~~~  174 (205)
T d1hdoa_         119 --------TKVPPRLQAVTDDHIRMHKVL-------R---ESGLKYVAVMPPHIGDQPLTGAYTVTLD------GRGPSR  174 (205)
T ss_dssp             --------TCSCGGGHHHHHHHHHHHHHH-------H---HTCSEEEEECCSEEECCCCCSCCEEESS------SCSSCS
T ss_pred             --------ccccccccccchHHHHHHHHH-------H---hcCCceEEEecceecCCCCcccEEEeeC------CCCCCC
Confidence                    022233455666676655432       2   45789999999988533221 1100000      000113


Q ss_pred             CCCHHHHHHHHHHHhcCCCCCcccE
Q 017580          301 LQSPEKGINSVLDAALAPPETSGVY  325 (369)
Q Consensus       301 ~~~~~e~A~~v~~~~l~~~~~sG~~  325 (369)
                      +.+.+|+|+.+++++..++ ..|+-
T Consensus       175 ~i~~~DvA~~~~~~l~~~~-~~g~~  198 (205)
T d1hdoa_         175 VISKHDLGHFMLRCLTTDE-YDGHS  198 (205)
T ss_dssp             EEEHHHHHHHHHHTTSCST-TTTCE
T ss_pred             cCCHHHHHHHHHHHhCCCC-CCCEE
Confidence            4689999999998765544 33443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=8.5e-15  Score=133.05  Aligned_cols=168  Identities=11%  Similarity=0.070  Sum_probs=123.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .|.||||||+|.||.+++++|+++|+.|+++++..                      .+|+.+.+.+.++++.       
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~-------   52 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFAS-------   52 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhh-------
Confidence            46899999999999999999999999888765432                      2689999888877653       


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCcc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNET  221 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~~  221 (369)
                          ..+|.++|+|+..... ........+.+++|+.++..+++++...    + -.++|++||.+.+..... ++..+ 
T Consensus        53 ----~~~d~v~~~a~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-v~~~i~~SS~~vyg~~~~~~~~E~-  121 (315)
T d1e6ua_          53 ----ERIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYPKLAKQPMAES-  121 (315)
T ss_dssp             ----HCCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSCTTCCSSBCGG-
T ss_pred             ----cCCCEEEEcchhcccc-ccchhhHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEECCceEcCCCCCCCccCC-
Confidence                3489999999765321 1234455667889999999998887443    1 358999999887643221 11111 


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  280 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~  280 (369)
                          ...+..+.++...|+.||.+.+.+++.+.++.      ++++.++.|+.|-.|..
T Consensus       122 ----~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         122 ----ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY------GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             ----GTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEESTTC
T ss_pred             ----ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEeeccEECCCC
Confidence                11112445566789999999999999998765      58899999998877643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.59  E-value=2.6e-14  Score=130.62  Aligned_cols=173  Identities=14%  Similarity=0.067  Sum_probs=116.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc-hHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      .||||||+|.||.+++++|+++|++|+++++-.. ........+..   ..++.++.+|+++.+++.++++..       
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-------   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-------   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-------
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-------
Confidence            4899999999999999999999999999875322 12222222222   457899999999999988877643       


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc-
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI-  222 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~-  222 (369)
                          ++|++||+|+....  ....++.+..+++|+.|+.++++++...    + ..+.|+.||...........+.... 
T Consensus        72 ----~~d~Vih~aa~~~~--~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~-~~~~i~~sS~~~~~~~~~~~~~~~~~  140 (338)
T d1orra_          72 ----MPDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQY----N-SNCNIIYSSTNKVYGDLEQYKYNETE  140 (338)
T ss_dssp             ----CCSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHH----C-TTCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             ----CCceEEeecccccc--cccccChHHHHHHHHHHHHHHHHhhhcc----c-cccccccccccccccccccccccccc
Confidence                48999999987532  1223455788999999999999876543    1 2355555554444332211111000 


Q ss_pred             -------ccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhC
Q 017580          223 -------TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  258 (369)
Q Consensus       223 -------~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~  258 (369)
                             .........+..+...|+.+|...+.+.....+.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         141 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence                   001111234455678999999999999998888764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.58  E-value=8.1e-15  Score=135.36  Aligned_cols=191  Identities=15%  Similarity=0.066  Sum_probs=134.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++||+||||||||.||.+++++|+++|++|++++|+........+...   ....+.++.+|++|++.+.++.+.     
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~i~~~~~Dl~d~~~l~~~~~~-----   77 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIRE-----   77 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHH-----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh---cccCCeEEEeeccChHhhhhhhhh-----
Confidence            358999999999999999999999999999999998765544433321   134689999999999988876664     


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                            ..+|+++|.|+....  ..+.+..+..+.+|+.|+..+++++...-  .  ...+++.||.............+
T Consensus        78 ------~~~~~v~~~aa~~~~--~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~--~--~~~~~~~s~~~~~~~~~~~~~~~  145 (356)
T d1rkxa_          78 ------FQPEIVFHMAAQPLV--RLSYSEPVETYSTNVMGTVYLLEAIRHVG--G--VKAVVNITSDKCYDNKEWIWGYR  145 (356)
T ss_dssp             ------HCCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHHC--C--CCEEEEECCGGGBCCCCSSSCBC
T ss_pred             ------chhhhhhhhhccccc--cccccCCccccccccccchhhhhhhhccc--c--ccccccccccccccccccccccc
Confidence                  348999999986422  22345567789999999999988875532  1  24555555544432222211111


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEecCCcccCCc
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD---KSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~---~~~~i~v~~v~PG~v~T~~  279 (369)
                      +        ..+..+...|+.+|.+.+..++..+.++...   ...++.+..+.|+.+..|-
T Consensus       146 ~--------~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         146 E--------NEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             T--------TSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             c--------ccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence            1        1334456689999999999999888876521   1346788888998776543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.56  E-value=4.6e-15  Score=135.50  Aligned_cols=231  Identities=13%  Similarity=0.063  Sum_probs=149.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEE------EeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVL------VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl------~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .|+||||+|.||.+++++|+++|++|..      .++......  ...+.......++.++..|.++.......      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLARE------   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHH------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccchhhhcc------
Confidence            4899999999999999999999975443      332111000  01111222256799999999998755432      


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QV  217 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~  217 (369)
                             ....|.++|.|+....  ....+..++.+++|+.++..+++++...    + ..++|++||.+.+..... ++
T Consensus        74 -------~~~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~-~~~~I~~Ss~~~yg~~~~~~~  139 (322)
T d1r6da_          74 -------LRGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDA----G-VGRVVHVSTNQVYGSIDSGSW  139 (322)
T ss_dssp             -------TTTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCCCSSSCB
T ss_pred             -------ccccceEEeecccccc--cccccchHHHhhhhHHHHHHHHHHHHHc----C-CceEEEeecceeecCCCCCCC
Confidence                   2458999999987422  2234555678899999999999887543    2 358999999876643211 12


Q ss_pred             CCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-H
Q 017580          218 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-K  296 (369)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~  296 (369)
                      +          +..+..+...|+.||.+.+.+++.++++.      ++.+..+.|+.|-.|-................ .
T Consensus       140 ~----------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~  203 (322)
T d1r6da_         140 T----------ESSPLEPNSPYAASKAGSDLVARAYHRTY------GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGG  203 (322)
T ss_dssp             C----------TTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTC
T ss_pred             C----------CCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCC
Confidence            1          12455566789999999999999998865      57899999999987643321111111110000 0


Q ss_pred             Hh---------hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          297 LL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       297 ~~---------~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      ++         +-+...+|+|++++.++....  .|..|+...+.+..
T Consensus       204 ~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~--~~~~~ni~~~~~~s  249 (322)
T d1r6da_         204 TLPLYGDGANVREWVHTDDHCRGIALVLAGGR--AGEIYHIGGGLELT  249 (322)
T ss_dssp             CEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCCCEEE
T ss_pred             CcEEecCCCeEEccEEHHHHHHHHHHHHhCCC--CCCeeEEeecccch
Confidence            11         013579999999996554332  45566666666664

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.55  E-value=8.2e-14  Score=129.08  Aligned_cols=182  Identities=14%  Similarity=0.067  Sum_probs=126.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++..||||||+|.||.+++++|.++|++|+++++.....      ....  .....+..+|+.+.+++.++.+       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~--~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTED--MFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGG--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhh--cccCcEEEeechhHHHHHHHhh-------
Confidence            345699999999999999999999999999998754321      0000  1245678889998876654332       


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc-CCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ-VNNE  220 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~-~~~~  220 (369)
                            .+|.+||.|+...... .+.+.....+.+|+.++..++.++...    + -.++|++||...+...... ....
T Consensus        79 ------~~d~Vih~a~~~~~~~-~~~~~~~~~~~~n~~gt~~ll~~~~~~----~-vk~~i~~SS~~~~~~~~~~~~~~~  146 (363)
T d2c5aa1          79 ------GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMIEAARIN----G-IKRFFYASSACIYPEFKQLETTNV  146 (363)
T ss_dssp             ------TCSEEEECCCCCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEEEEGGGSCGGGSSSSSSC
T ss_pred             ------cCCeEeeccccccccc-ccccccccccccccchhhHHHHhHHhh----C-cccccccccccccccccccccccc
Confidence                  4899999998753211 123445678889999999998886544    1 3599999998766433221 1111


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                      ..   ...+..+..+...|+.||.+.+.+++...++.      ++.+..+.|+.+..+.
T Consensus       147 ~~---~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~------gl~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         147 SL---KESDAWPAEPQDAFGLEKLATEELCKHYNKDF------GIECRIGRFHNIYGPF  196 (363)
T ss_dssp             EE---CGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTT
T ss_pred             cc---ccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEEeeeEeccC
Confidence            11   11112445556789999999999999988765      5789999998887654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.1e-14  Score=123.01  Aligned_cols=202  Identities=13%  Similarity=0.107  Sum_probs=133.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++|+|+||||||.||.+++++|.++|.  +|++++|++.....-      .  ...+....+|+.+.+++.+       
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~--~~~i~~~~~D~~~~~~~~~-------   76 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A--YKNVNQEVVDFEKLDDYAS-------   76 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G--GGGCEEEECCGGGGGGGGG-------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c--cceeeeeeecccccccccc-------
Confidence            4678999999999999999999999995  899999986542210      1  2466777788888765432       


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  218 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~  218 (369)
                            .....|+++|++|...     .........++|+.++..+++.+..    .+ -.++|++||....        
T Consensus        77 ------~~~~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~----~~-v~~fi~~Ss~~~~--------  132 (232)
T d2bkaa1          77 ------AFQGHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAKA----GG-CKHFNLLSSKGAD--------  132 (232)
T ss_dssp             ------GGSSCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCC--------
T ss_pred             ------cccccccccccccccc-----cccchhhhhhhcccccceeeecccc----cC-ccccccCCccccc--------
Confidence                  2245899999998641     2334456678899999888887643    22 4689999997754        


Q ss_pred             CcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH-
Q 017580          219 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-  297 (369)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-  297 (369)
                                    ......|+.+|...+...+.    +.   ..  ++..+.||.+..+.........  .......+ 
T Consensus       133 --------------~~~~~~Y~~~K~~~E~~l~~----~~---~~--~~~IlRP~~i~G~~~~~~~~~~--~~~~~~~~~  187 (232)
T d2bkaa1         133 --------------KSSNFLYLQVKGEVEAKVEE----LK---FD--RYSVFRPGVLLCDRQESRPGEW--LVRKFFGSL  187 (232)
T ss_dssp             --------------TTCSSHHHHHHHHHHHHHHT----TC---CS--EEEEEECCEEECTTGGGSHHHH--HHHHHHCSC
T ss_pred             --------------cCccchhHHHHHHhhhcccc----cc---cc--ceEEecCceeecCCCcCcHHHH--HHHHHhhcc
Confidence                          12234699999887754422    21   11  4778899999876543221111  11111111 


Q ss_pred             -----hhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          298 -----LGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       298 -----~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                           .....+++|+|+++++++..+.. .+.+++
T Consensus       188 ~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~  221 (232)
T d2bkaa1         188 PDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELL  221 (232)
T ss_dssp             CTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEE
T ss_pred             CCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEE
Confidence                 11235789999999987755543 455554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.49  E-value=4.2e-14  Score=122.67  Aligned_cols=211  Identities=13%  Similarity=0.006  Sum_probs=129.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++||||||+|+||++++++|+++|+  .|+...|++++.+..         ..+++++.+|+++.+++.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccccccccccc-------
Confidence            6899999999999999999999996  566678887543321         3467899999999988765543       


Q ss_pred             ccCCCCCccEEEeccccccCC-----------CCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          142 DSDMHSSIQLLINNAGILATS-----------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~-----------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                            .+|.+||+|+.....           .............+|+.++..++.......     .+.....|+....
T Consensus        68 ------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~  136 (252)
T d2q46a1          68 ------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-----VKHIVVVGSMGGT  136 (252)
T ss_dssp             ------TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-----CSEEEEEEETTTT
T ss_pred             ------cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-----ccccccccccccC
Confidence                  389999999865211           011223345667889999888877654442     3677777775544


Q ss_pred             ccccccCCCcccccccccccCCCchhhhhhhhHHHHHH-HHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH
Q 017580          211 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLI-FSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL  289 (369)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~-~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~  289 (369)
                                          .+..+...|..++..... ....+..      ..++++..++||.+..+...........
T Consensus       137 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ilRp~~v~g~~~~~~~~~~~~  190 (252)
T d2q46a1         137 --------------------NPDHPLNKLGNGNILVWKRKAEQYLA------DSGTPYTIIRAGGLLDKEGGVRELLVGK  190 (252)
T ss_dssp             --------------------CTTCGGGGGGGCCHHHHHHHHHHHHH------HSSSCEEEEEECEEECSCTTSSCEEEES
T ss_pred             --------------------CCCcccccccccchhhhhhhhhhhhh------cccccceeecceEEECCCcchhhhhhcc
Confidence                                222222223333322222 2222222      3578899999999866543221100000


Q ss_pred             HHHHHHHHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017580          290 MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  329 (369)
Q Consensus       290 ~~~~~~~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~  329 (369)
                      .. ........+.+++|+|++++.++.. +...|+.|...
T Consensus       191 ~~-~~~~~~~~~i~~~Dva~a~~~~l~~-~~~~g~~~~i~  228 (252)
T d2q46a1         191 DD-ELLQTDTKTVPRADVAEVCIQALLF-EEAKNKAFDLG  228 (252)
T ss_dssp             TT-GGGGSSCCEEEHHHHHHHHHHHTTC-GGGTTEEEEEE
T ss_pred             Cc-ccccCCCCeEEHHHHHHHHHHHhCC-ccccCcEEEEe
Confidence            00 0000011346899999999976544 44567666543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.48  E-value=7.2e-13  Score=123.56  Aligned_cols=190  Identities=14%  Similarity=0.019  Sum_probs=131.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHH-CCCEEEEEeC---------CcchHHHHHHHHHhh------cCCCcEEEEEecCCChHH
Q 017580           65 VCIVTGATSGLGAAAAYALSR-EGFHVVLVGR---------SSHLLSETMADITSR------NKDARLEAFQVDLSSFQS  128 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~-~G~~Vvl~~r---------~~~~~~~~~~~~~~~------~~~~~v~~~~~Dls~~~~  128 (369)
                      .||||||+|.||.+++++|++ .|++|+++++         ..+..+.....+...      ..+..+.++.+|++|.+.
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   83 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHH
Confidence            599999999999999999986 6899999874         223334444444321      224568899999999998


Q ss_pred             HHHHHHHHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          129 VLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       129 i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                      ++++++.          ..++|+++|.|+....  ....+.....+++|+.++..++.++...    + ..++++++|..
T Consensus        84 l~~~~~~----------~~~~d~ViH~Aa~~~~--~~~~~~~~~~~~~N~~~t~~~l~~~~~~----~-~~~~~~~~s~~  146 (383)
T d1gy8a_          84 LNGVFTR----------HGPIDAVVHMCAFLAV--GESVRDPLKYYDNNVVGILRLLQAMLLH----K-CDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHH----------SCCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGG
T ss_pred             hhhhhhc----------cceeehhhcccccccc--cccccccccccccccccccccchhhhcc----C-Ccccccccccc
Confidence            8887764          3569999999997532  1223455678899999999998887543    2 35777777766


Q ss_pred             ccccccccCCCcccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017580          209 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  279 (369)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~  279 (369)
                      ............  ......+..+..+...|+.||.+.+.+++.+...+      ++.+.++.|+.+..+.
T Consensus       147 ~~~~~~~~~~~~--~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------gl~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         147 IFGNPTMGSVST--NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY------GIKGICLRYFNACGAH  209 (383)
T ss_dssp             GTBSCCC-------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECCC
T ss_pred             cccccccccccc--cccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh------CCCEEEEecceeeccC
Confidence            553321111000  00111122455667889999999999999988754      6888999998876554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.34  E-value=5.2e-12  Score=113.46  Aligned_cols=231  Identities=9%  Similarity=0.037  Sum_probs=127.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ++||||||||.||++++++|+++|++|++++|+.........+.........+.++.+|++|.+++.+.++         
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~---------   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK---------   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT---------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc---------
Confidence            45999999999999999999999999999999764322111111111124568899999999887665433         


Q ss_pred             CCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017580          144 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  223 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  223 (369)
                          ..+.++++++....             ..|..+...++..+    .+.. ..++++.||.......          
T Consensus        75 ----~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~a----~~~~-~~~~v~~Ss~g~~~~~----------  122 (312)
T d1qyda_          75 ----QVDVVISALAGGVL-------------SHHILEQLKLVEAI----KEAG-NIKRFLPSEFGMDPDI----------  122 (312)
T ss_dssp             ----TCSEEEECCCCSSS-------------STTTTTHHHHHHHH----HHSC-CCSEEECSCCSSCTTS----------
T ss_pred             ----Ccchhhhhhhhccc-------------ccchhhhhHHHHHH----HHhc-CCcEEEEeeccccCCC----------
Confidence                36778887765321             12333333343333    2222 3567777765432110          


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH--------HHHHHHHH
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--------SLMAFTVL  295 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~  295 (369)
                           ...+..+...|..+|.....    ...      ..++.+..++||.+..+.........        ........
T Consensus       123 -----~~~~~~~~~~~~~~~~~~~~----~~~------~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g  187 (312)
T d1qyda_         123 -----MEHALQPGSITFIDKRKVRR----AIE------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDG  187 (312)
T ss_dssp             -----CCCCCSSTTHHHHHHHHHHH----HHH------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTS
T ss_pred             -----cccccchhhhhhHHHHHHHH----hhc------ccccceEEeccceeecCCccchhhHHHHhhhccccccccccc
Confidence                 00222233445555555443    222      23566777788877432211110000        00000000


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  360 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  360 (369)
                      .....+.+++|+|++++.++..++..++.++....+..+.          .+++++..+++.++.
T Consensus       188 ~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s----------~~e~~~~~~~~~g~~  242 (312)
T d1qyda_         188 NVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILS----------QKEVIQIWERLSEQN  242 (312)
T ss_dssp             CSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEE----------HHHHHHHHHHHHTCC
T ss_pred             ccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCC----------HHHHHHHHHHHHCCC
Confidence            0011247899999999977665544445566555444443          455666666665543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.25  E-value=2.1e-11  Score=108.01  Aligned_cols=204  Identities=18%  Similarity=0.111  Sum_probs=127.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  145 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~  145 (369)
                      |+||||||.||.+++++|.++|++|+.++|+.                       +|++|.++++++++..         
T Consensus         4 IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~---------   51 (281)
T d1vl0a_           4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK---------   51 (281)
T ss_dssp             EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH---------
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc---------
Confidence            89999999999999999999999999998852                       5899999888777642         


Q ss_pred             CCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017580          146 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  225 (369)
Q Consensus       146 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  225 (369)
                        ++|++||+|+....  +.+....+..+..|+.....+.......      ...+++.||............       
T Consensus        52 --~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~~~~~~-------  114 (281)
T d1vl0a_          52 --KPNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGEAKEPI-------  114 (281)
T ss_dssp             --CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSCCSSCB-------
T ss_pred             --CCCEEEeecccccc--ccccccchhhcccccccccccccccccc------cccccccccceeeeccccccc-------
Confidence              47999999986432  1223444566778887777776655333      246777776554422211111       


Q ss_pred             cccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH-------h
Q 017580          226 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-------L  298 (369)
Q Consensus       226 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-------~  298 (369)
                        .+..+..+...|+.+|.+.+.+++.    .      +.+...+.|+.+-.+-..-........  ....+       .
T Consensus       115 --~e~~~~~~~~~~~~~k~~~e~~~~~----~------~~~~~i~R~~~vyG~~~~~~~~~~~~~--~~~~~~~~~~~~~  180 (281)
T d1vl0a_         115 --TEFDEVNPQSAYGKTKLEGENFVKA----L------NPKYYIVRTAWLYGDGNNFVKTMINLG--KTHDELKVVHDQV  180 (281)
T ss_dssp             --CTTSCCCCCSHHHHHHHHHHHHHHH----H------CSSEEEEEECSEESSSSCHHHHHHHHH--HHCSEEEEESSCE
T ss_pred             --cccccccchhhhhhhhhHHHHHHHH----h------CCCccccceeEEeCCCcccccchhhhh--ccCCceeecCCce
Confidence              1113445567899999887766532    2      234667899998765422111110000  00000       0


Q ss_pred             hCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017580          299 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  335 (369)
Q Consensus       299 ~~~~~~~e~A~~v~~~~l~~~~~sG~~~~~~~g~~~~  335 (369)
                      +.+...+|+++++..++-..  .+|.|...+ +..+.
T Consensus       181 ~~~i~v~D~~~~~~~~~~~~--~~g~~~~~~-~~~~s  214 (281)
T d1vl0a_         181 GTPTSTVDLARVVLKVIDEK--NYGTFHCTC-KGICS  214 (281)
T ss_dssp             ECCEEHHHHHHHHHHHHHHT--CCEEEECCC-BSCEE
T ss_pred             eccchhhhhhhhhhhhhhhc--ccCceeEeC-CCccc
Confidence            13468999999999765333  346555433 44443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.23  E-value=3.2e-12  Score=109.08  Aligned_cols=192  Identities=15%  Similarity=0.075  Sum_probs=117.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.++||||||.||++++++|+++|.  +|+..+|++..            ...++   ..+..|..++   .+   .  
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~------------~~~~~---~~~~~d~~~~---~~---~--   58 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRL---DNPVGPLAEL---LP---Q--   58 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTE---ECCBSCHHHH---GG---G--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh------------hcccc---cccccchhhh---hh---c--
Confidence            37899999999999999999999997  67777776431            01222   3344443322   11   1  


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  220 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  220 (369)
                          ....+|.+|+++|.....    ....+...++|+.++..+++.+.    +.+ -.+++++||..+.          
T Consensus        59 ----~~~~~d~vi~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~a~----~~~-v~~~i~~Ss~~~~----------  115 (212)
T d2a35a1          59 ----LDGSIDTAFCCLGTTIKE----AGSEEAFRAVDFDLPLAVGKRAL----EMG-ARHYLVVSALGAD----------  115 (212)
T ss_dssp             ----CCSCCSEEEECCCCCHHH----HSSHHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEECCTTCC----------
T ss_pred             ----cccchheeeeeeeeeccc----cccccccccchhhhhhhcccccc----ccc-ccccccccccccc----------
Confidence                346789999999875211    12235678889999988888753    222 4689999997754          


Q ss_pred             ccccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHH----HHHHHHHH
Q 017580          221 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFL----SLMAFTVL  295 (369)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~----~~~~~~~~  295 (369)
                                  ......|..+|...+...+    ++.   .+  +.+.++|+.|..+...... ...    ........
T Consensus       116 ------------~~~~~~y~~~K~~~E~~l~----~~~---~~--~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  174 (212)
T d2a35a1         116 ------------AKSSIFYNRVKGELEQALQ----EQG---WP--QLTIARPSLLFGPREEFRLAEILAAPIARILPGKY  174 (212)
T ss_dssp             ------------TTCSSHHHHHHHHHHHHHT----TSC---CS--EEEEEECCSEESTTSCEEGGGGTTCCCC----CHH
T ss_pred             ------------cccccchhHHHHHHhhhcc----ccc---cc--cceeeCCcceeCCcccccHHHHHHHHHhhccCCCC
Confidence                        1234569999987765432    221   11  5778899998655432110 000    00000000


Q ss_pred             HHhhCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017580          296 KLLGLLQSPEKGINSVLDAALAPPETSGVYFF  327 (369)
Q Consensus       296 ~~~~~~~~~~e~A~~v~~~~l~~~~~sG~~~~  327 (369)
                          +....+|+|++++.++..+  ..|.+++
T Consensus       175 ----~~i~v~DvA~ai~~~~~~~--~~g~~~~  200 (212)
T d2a35a1         175 ----HGIEACDLARALWRLALEE--GKGVRFV  200 (212)
T ss_dssp             ----HHHHHHHHHHHHHHHHTCC--CSEEEEE
T ss_pred             ----cEEEHHHHHHHHHHHHcCC--CCCCEEE
Confidence                1247899999999765433  3455543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.13  E-value=6.3e-11  Score=105.56  Aligned_cols=140  Identities=14%  Similarity=0.060  Sum_probs=95.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      .||||||+|-||.+++++|.++|..|+ ++++...                   +..|++|.+.++++++..        
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~--------   53 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE-------------------FCGDFSNPKGVAETVRKL--------   53 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS-------------------SCCCTTCHHHHHHHHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc-------------------ccCcCCCHHHHHHHHHHc--------
Confidence            399999999999999999999886544 4444321                   347999999888877643        


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  224 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  224 (369)
                         .+|++||+||.....  .+.+..+..+++|+.++..+..+...    .  ..+++++||......... .+      
T Consensus        54 ---~~D~Vih~Aa~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~~~~ss~~~~~~~~~-~~------  115 (298)
T d1n2sa_          54 ---RPDVIVNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANE----T--GAWVVHYSTDYVFPGTGD-IP------  115 (298)
T ss_dssp             ---CCSEEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTT----T--TCEEEEEEEGGGSCCCTT-CC------
T ss_pred             ---CCCEEEEeccccccc--ccccCccccccccccccccchhhhhc----c--ccccccccccccccCCCC-CC------
Confidence               389999999975321  12334467889999999998887632    2  367888888665422111 11      


Q ss_pred             ccccccCCCchhhhhhhhHHHHHHHHHH
Q 017580          225 KFFLRSKCYPCARIYEYSKLCLLIFSYE  252 (369)
Q Consensus       225 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  252 (369)
                        +.+..+..+...|+.+|.+.+.+.+.
T Consensus       116 --~~E~~~~~p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         116 --WQETDATSPLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             --BCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             --CccccccCCCchHhhhhhhhhhhHHh
Confidence              11124445567899999888766543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.12  E-value=4.8e-10  Score=99.64  Aligned_cols=82  Identities=20%  Similarity=0.216  Sum_probs=60.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHH--HHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE--TMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.||||||||.||++++++|+++|++|++++|+......  ....+.... ...+.++..|+.+.+...+.++      
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhh------
Confidence            4779999999999999999999999999999997654221  112222211 3467889999999887655443      


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                             ..+.++++++.
T Consensus        76 -------~~~~vi~~~~~   86 (307)
T d1qyca_          76 -------NVDVVISTVGS   86 (307)
T ss_dssp             -------TCSEEEECCCG
T ss_pred             -------hceeeeecccc
Confidence                   26788888875

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.92  E-value=2.7e-09  Score=94.95  Aligned_cols=170  Identities=15%  Similarity=0.134  Sum_probs=100.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccC
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  144 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~  144 (369)
                      ||||||+|.||.+++++|+++|+ .|+++++-... .+... +.    +.    ..+|..+.+   ...+.+...    .
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~~-~~----~~----~~~~~~~~~---~~~~~~~~~----~   64 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFVN-LV----DL----NIADYMDKE---DFLIQIMAG----E   64 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGHH-HH----TS----CCSEEEEHH---HHHHHHHTT----C
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhhc-cc----cc----chhhhccch---HHHHHHhhh----h
Confidence            89999999999999999999997 57776532221 11111 11    11    112222222   223332221    1


Q ss_pred             CCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCcccc
Q 017580          145 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETIT  223 (369)
Q Consensus       145 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~~~~  223 (369)
                      ....+++++|.|+.....    ....+...+.|+.++..+.......      .-++|+.||......... ..+.+   
T Consensus        65 ~~~~~~~i~~~aa~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~------~i~~v~~ss~~~~~~~~~~~~~~~---  131 (307)
T d1eq2a_          65 EFGDVEAIFHEGACSSTT----EWDGKYMMDNNYQYSKELLHYCLER------EIPFLYASSAATYGGRTSDFIESR---  131 (307)
T ss_dssp             CCSSCCEEEECCSCCCTT----CCCHHHHHHHTHHHHHHHHHHHHHH------TCCEEEEEEGGGGTTCCSCBCSSG---
T ss_pred             cccchhhhhhhccccccc----ccccccccccccccccccccccccc------cccccccccccccccccccccccc---
Confidence            456788899988754322    2233456777888888777765433      134556665554433221 11111   


Q ss_pred             cccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       224 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                             .+.++...|+.+|.+.+.+++.+..+      .++.+..+.|..+..|
T Consensus       132 -------~~~~~~~~Y~~~K~~~e~~~~~~~~~------~~~~~~~~r~~~vyGp  173 (307)
T d1eq2a_         132 -------EYEKPLNVYGYSKFLFDEYVRQILPE------ANSQIVGFRYFNVYGP  173 (307)
T ss_dssp             -------GGCCCSSHHHHHHHHHHHHHHHHGGG------CSSCEEEEEECEEESS
T ss_pred             -------cccccccccccccchhhhhccccccc------cccccccccceeEeec
Confidence                   23345578999999999998888754      4567777888777655

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.90  E-value=1.4e-08  Score=92.61  Aligned_cols=153  Identities=16%  Similarity=0.049  Sum_probs=93.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +.|+|+||||||.||.+++++|+++|++|+++.|+..+...  ..+..   ...+.+++.|+.|..++.+   .+.    
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~---~a~----   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMD---TLF----   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHH---HHH----
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHH---HHh----
Confidence            36899999999999999999999999999999999876432  22221   3468899999998765322   221    


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  221 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  221 (369)
                           ...|.++.+.....              ..|+.....++.++.    +.+ ..+++..||......         
T Consensus        70 -----~~~~~~~~~~~~~~--------------~~~~~~~~~~~~aa~----~ag-v~~~v~~Ss~~~~~~---------  116 (350)
T d1xgka_          70 -----EGAHLAFINTTSQA--------------GDEIAIGKDLADAAK----RAG-TIQHYIYSSMPDHSL---------  116 (350)
T ss_dssp             -----TTCSEEEECCCSTT--------------SCHHHHHHHHHHHHH----HHS-CCSEEEEEECCCGGG---------
T ss_pred             -----cCCceEEeeccccc--------------chhhhhhhHHHHHHH----HhC-CCceEEEeecccccc---------
Confidence                 34666665543211              112333333444432    222 347777887654411         


Q ss_pred             cccccccccCCCchhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017580          222 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  278 (369)
Q Consensus       222 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~el~~~~~~~i~v~~v~PG~v~T~  278 (369)
                               .+......|..+|.....+.+          ..++....+.||.+..+
T Consensus       117 ---------~~~~~~~~~~~~k~~~~~~~~----------~~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_         117 ---------YGPWPAVPMWAPKFTVENYVR----------QLGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             ---------TSSCCCCTTTHHHHHHHHHHH----------TSSSCEEEEEECEEGGG
T ss_pred             ---------CCcccchhhhhhHHHHHHHHH----------hhccCceeeeeceeecc
Confidence                     222233456677866654432          23456777788766443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.77  E-value=4.2e-13  Score=112.96  Aligned_cols=49  Identities=24%  Similarity=0.304  Sum_probs=43.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCC
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA  114 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~  114 (369)
                      +.|+||+|+||+++|+.|++.|++|++++|++++++++.+++....+..
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~   51 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDA   51 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSC
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCc
Confidence            6677888999999999999999999999999999999999987764433

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=7.8e-06  Score=66.82  Aligned_cols=86  Identities=21%  Similarity=0.251  Sum_probs=64.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.+..+++.+..+.............|+.+.+++.+...    
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA----   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc----
Confidence            567999999999 6999999999999998 8999999988777665544332222345566788888776544322    


Q ss_pred             HHhccCCCCCccEEEeccccc
Q 017580          139 WLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~  159 (369)
                               ..|++||+..+.
T Consensus        90 ---------~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ---------SADILTNGTKVG  101 (182)
T ss_dssp             ---------TCSEEEECSSTT
T ss_pred             ---------ccceeccccCCc
Confidence                     389999998653

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.97  E-value=1.1e-05  Score=65.88  Aligned_cols=105  Identities=13%  Similarity=0.114  Sum_probs=69.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +|++|+|+||+||+|.+.+.-....|++|+.+++++++.+.+.+    .  +....   +|-.+++..+...+..     
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~--Ga~~v---i~~~~~~~~~~~~~~~-----   94 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----I--GFDAA---FNYKTVNSLEEALKKA-----   94 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T--TCSEE---EETTSCSCHHHHHHHH-----
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----h--hhhhh---cccccccHHHHHHHHh-----
Confidence            48999999999999999999999999999999998776544332    2  32222   2334433333332221     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                         ...++|+++++.|.         +.+               +..++.++.   .|+++.++...+.
T Consensus        95 ---~~~Gvd~v~D~vG~---------~~~---------------~~~~~~l~~---~G~~v~~G~~~~~  133 (182)
T d1v3va2          95 ---SPDGYDCYFDNVGG---------EFL---------------NTVLSQMKD---FGKIAICGAISVY  133 (182)
T ss_dssp             ---CTTCEEEEEESSCH---------HHH---------------HHHGGGEEE---EEEEEECCCGGGT
T ss_pred             ---hcCCCceeEEecCc---------hhh---------------hhhhhhccC---CCeEEeecceeec
Confidence               44679999999873         111               234444543   4899999876544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=1.4e-05  Score=64.67  Aligned_cols=79  Identities=16%  Similarity=0.247  Sum_probs=55.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|+||+|++|...+.-....|++|+++++++++.+.++ ++     +.. .  .+|.++.+-    .+++++.. 
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~-----Ga~-~--vi~~~~~~~----~~~i~~~t-   93 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QN-----GAH-E--VFNHREVNY----IDKIKKYV-   93 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCS-E--EEETTSTTH----HHHHHHHH-
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-cc-----Ccc-c--ccccccccH----HHHhhhhh-
Confidence            3789999999999999999999899999999999876654433 22     222 1  246666543    23333322 


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ....+|+++.+.|
T Consensus        94 ---~~~g~d~v~d~~g  106 (174)
T d1yb5a2          94 ---GEKGIDIIIEMLA  106 (174)
T ss_dssp             ---CTTCEEEEEESCH
T ss_pred             ---ccCCceEEeeccc
Confidence               3467999999876

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=2.7e-05  Score=63.15  Aligned_cols=79  Identities=11%  Similarity=0.109  Sum_probs=57.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |++|+|+||+||+|...+.-....|++|+.+++++++.+.+++ +     +..   ..+|-++++-.+    ++++.-  
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l-----Ga~---~vi~~~~~d~~~----~v~~~t--   93 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW---QVINYREEDLVE----RLKEIT--   93 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHH----HHHHHT--
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c-----CCe---EEEECCCCCHHH----HHHHHh--
Confidence            7899999999999999999999999999999999888765542 2     332   234666644332    333321  


Q ss_pred             cCCCCCccEEEecccc
Q 017580          143 SDMHSSIQLLINNAGI  158 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~  158 (369)
                        ....+|+++.+.|.
T Consensus        94 --~g~g~d~v~d~~g~  107 (179)
T d1qora2          94 --GGKKVRVVYDSVGR  107 (179)
T ss_dssp             --TTCCEEEEEECSCG
T ss_pred             --CCCCeEEEEeCccH
Confidence              34679999998874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.79  E-value=5.8e-05  Score=59.93  Aligned_cols=85  Identities=16%  Similarity=0.304  Sum_probs=61.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++++.++|.|+ |++|..+++.|..+|+ ++.++.|+.++.++..+++     +..  .  .++   +++.+   .+. 
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~--~--~~~---~~~~~---~l~-   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--A--VRF---DELVD---HLA-   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--E--CCG---GGHHH---HHH-
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hcc--c--ccc---hhHHH---Hhc-
Confidence            467899999998 9999999999999998 7999999999888887766     222  1  122   33322   222 


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHH
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQ  172 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~  172 (369)
                               ..|++|++.+...  +-++.+.++.
T Consensus        84 ---------~~Divi~atss~~--~ii~~~~i~~  106 (159)
T d1gpja2          84 ---------RSDVVVSATAAPH--PVIHVDDVRE  106 (159)
T ss_dssp             ---------TCSEEEECCSSSS--CCBCHHHHHH
T ss_pred             ---------cCCEEEEecCCCC--ccccHhhhHH
Confidence                     3899999988533  3355665553

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.74  E-value=2.8e-05  Score=63.25  Aligned_cols=79  Identities=15%  Similarity=0.127  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +|++|+|+||+|++|...+......|++|+++++++++.+.+    ++.  +.. +  ..|-.+++ +   .+++++.. 
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~--Ga~-~--vi~~~~~~-~---~~~v~~~t-   90 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRL--GVE-Y--VGDSRSVD-F---ADEILELT-   90 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTT--CCS-E--EEETTCST-H---HHHHHHHT-
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc----ccc--ccc-c--cccCCccC-H---HHHHHHHh-
Confidence            378999999999999999999888999999999987665433    232  222 1  23445543 2   23333322 


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ...++|+++.+.|
T Consensus        91 ---~~~g~d~v~d~~g  103 (183)
T d1pqwa_          91 ---DGYGVDVVLNSLA  103 (183)
T ss_dssp             ---TTCCEEEEEECCC
T ss_pred             ---CCCCEEEEEeccc
Confidence               2357999999987

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.68  E-value=0.00043  Score=54.01  Aligned_cols=118  Identities=16%  Similarity=0.199  Sum_probs=75.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      -.++.+.|.|| |.+|..+|..|+.+|.  +|++.++++++++....++....  ....+.+...|..+           
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~-----------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDD-----------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGG-----------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHH-----------
Confidence            34677888897 9999999999999985  89999999988887777776532  12334444444321           


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                               ...-|++|..||......+ +   -.+.+..|.    -+++.+.+.+.+....+.++++|-.
T Consensus        72 ---------l~daDvvvitag~~~~~~~-~---R~dl~~~N~----~i~~~i~~~i~~~~p~a~~ivvtNP  125 (148)
T d1ldna1          72 ---------CRDADLVVICAGANQKPGE-T---RLDLVDKNI----AIFRSIVESVMASGFQGLFLVATNP  125 (148)
T ss_dssp             ---------TTTCSEEEECCSCCCCTTT-C---SGGGHHHHH----HHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred             ---------hccceeEEEecccccccCc-c---hhHHHHHHH----HHHHHHHHHHHhhCCCceEEEecCc
Confidence                     2347999999997532221 1   123344453    3445555555444335778887753

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=3.2e-05  Score=53.21  Aligned_cols=43  Identities=28%  Similarity=0.379  Sum_probs=38.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      ++.+++|+||+||+|...+.-+...|++|+.+++++++.+-+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4789999999999999999988889999999999988776553

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.64  E-value=7.4e-05  Score=60.05  Aligned_cols=61  Identities=11%  Similarity=0.151  Sum_probs=46.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVL  130 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~  130 (369)
                      +|.|+|.|| |.+|+.+|+.|+++|++|++++|+.++++++.+++      ........+..+.....
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~------~~~~~~~~~~~~~~~~~   62 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALD   62 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC------TTEEEEECCTTCHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc------cccccccccccchhhhH
Confidence            588999987 99999999999999999999999999887766442      23444555555544433

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.63  E-value=8e-05  Score=60.89  Aligned_cols=87  Identities=18%  Similarity=0.136  Sum_probs=56.9

Q ss_pred             CC-EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RP-VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k-~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |+ +++++||+||+|.+.+.-.-..|++|+.+.|+.+..++..+.+++.+.+   +++..|-.+..+..+.+.++...  
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad---~vi~~~~~~~~~~~~~v~~~~~~--  103 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEWIKQ--  103 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHHHHH--
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc---EEEeccccchhHHHHHHHHHHhh--
Confidence            55 4555899999999999888888999999999988887777777665322   12222211222233333333321  


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ..+++|+++++.|
T Consensus       104 ---~g~~vdvv~D~vg  116 (189)
T d1gu7a2         104 ---SGGEAKLALNCVG  116 (189)
T ss_dssp             ---HTCCEEEEEESSC
T ss_pred             ---ccCCceEEEECCC
Confidence               3467999999877

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.61  E-value=0.00035  Score=54.39  Aligned_cols=119  Identities=14%  Similarity=0.116  Sum_probs=74.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      |.+.|.|+ |.+|..+|..|+.+|.  ++++.++++++++....++....  .+.......-|..+              
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~--------------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAA--------------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGG--------------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHH--------------
Confidence            45778896 8999999999999984  89999999988877776666432  23333444434322              


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                            ...-|++|..||...+..+-.-+.-.+.++.|.    .+++.+.+.+.+....+-++++|-.
T Consensus        67 ------l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtNP  124 (146)
T d1hyha1          67 ------LADADVVISTLGNIKLQQDNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISNP  124 (146)
T ss_dssp             ------GTTCSEEEECCSCGGGTC-------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             ------hccccEEEEeccccccccccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecCc
Confidence                  134799999999753221111111123344453    5556777777666546777777753

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.61  E-value=9.1e-05  Score=59.53  Aligned_cols=43  Identities=21%  Similarity=0.270  Sum_probs=37.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      .|++|+|+||+|++|...+.-....|++|+.+++++++.+.+.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~   69 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL   69 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc
Confidence            4889999999999999999988889999999999988766544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.59  E-value=5.2e-05  Score=61.30  Aligned_cols=103  Identities=16%  Similarity=0.116  Sum_probs=66.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|||+||+||+|.....-....|++|+.+++++++.+.+.+ +     +....+   |-++.  ..+..    +.. 
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l-----Ga~~vi---~~~~~--~~~~~----~~~-   94 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L-----GAKEVL---AREDV--MAERI----RPL-   94 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T-----TCSEEE---ECC---------------C-
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c-----ccceee---ecchh--HHHHH----HHh-
Confidence            47899999999999999999888999999999999887655432 2     333221   22221  11111    111 


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                         ..+++|+++.+.|-.         .++               ..+..++.   +||+|.++...+.
T Consensus        95 ---~~~gvD~vid~vgg~---------~~~---------------~~l~~l~~---~Griv~~G~~~g~  133 (176)
T d1xa0a2          95 ---DKQRWAAAVDPVGGR---------TLA---------------TVLSRMRY---GGAVAVSGLTGGA  133 (176)
T ss_dssp             ---CSCCEEEEEECSTTT---------THH---------------HHHHTEEE---EEEEEECSCCSSS
T ss_pred             ---hccCcCEEEEcCCch---------hHH---------------HHHHHhCC---CceEEEeecccCc
Confidence               346899999999842         111               23334443   4899999997665

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.59  E-value=0.00014  Score=58.11  Aligned_cols=82  Identities=18%  Similarity=0.212  Sum_probs=56.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |.+|+|+| +|+||...+..+...|++|+++++++++++.+++.      +... .+..|-.+ ++.....+++.+.   
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~------ga~~-~~~~~~~~-~~~~~~~~~~~~~---   94 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC------GADV-TLVVDPAK-EEESSIIERIRSA---   94 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT------TCSE-EEECCTTT-SCHHHHHHHHHHH---
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHc------CCcE-EEeccccc-cccchhhhhhhcc---
Confidence            78999997 58999999999999999999999999887655432      2222 22333222 2233444444442   


Q ss_pred             cCCCCCccEEEecccc
Q 017580          143 SDMHSSIQLLINNAGI  158 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~  158 (369)
                        ....+|++|.++|.
T Consensus        95 --~g~g~D~vid~~g~  108 (170)
T d1e3ja2          95 --IGDLPNVTIDCSGN  108 (170)
T ss_dssp             --SSSCCSEEEECSCC
T ss_pred             --cccCCceeeecCCC
Confidence              34579999999985

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=9.1e-05  Score=59.48  Aligned_cols=76  Identities=14%  Similarity=0.139  Sum_probs=57.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++||.|+|.|| ||.+++++..|.+.|.+|+++.|+.++.+++.+.+...+   .+..+  +..+.             
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~~--~~~~~-------------   75 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SIQAL--SMDEL-------------   75 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SEEEC--CSGGG-------------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc---ccccc--ccccc-------------
Confidence            357899999998 789999999999999999999999999988887775542   23322  22221             


Q ss_pred             HhccCCCCCccEEEeccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~  159 (369)
                           .....|++||+..+.
T Consensus        76 -----~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 -----EGHEFDLIINATSSG   90 (170)
T ss_dssp             -----TTCCCSEEEECCSCG
T ss_pred             -----cccccceeecccccC
Confidence                 124589999998654

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.53  E-value=0.00011  Score=59.62  Aligned_cols=82  Identities=16%  Similarity=0.211  Sum_probs=55.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.+|+|+|| |+||...+..+...|+ +|+++++++++++.+. ++     +.. ++  +|..+. +..+..+++.+..
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~-~~~~~~~~i~~~~   96 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GAD-LT--LNRRET-SVEERRKAIMDIT   96 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCS-EE--EETTTS-CHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cc-----cce-EE--Eecccc-chHHHHHHHHHhh
Confidence            4899999997 8999999999999998 8999999998876543 32     322 22  244332 2233334444322


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ....+|++|.++|.
T Consensus        97 ----~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          97 ----HGRGADFILEATGD  110 (182)
T ss_dssp             ----TTSCEEEEEECSSC
T ss_pred             ----CCCCceEEeecCCc
Confidence                23569999999885

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.49  E-value=0.00012  Score=56.07  Aligned_cols=59  Identities=20%  Similarity=0.330  Sum_probs=49.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLK  131 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~  131 (369)
                      .|+|.|+ |.+|+.+++.|.++|..|+++++|++..+++.+++       .+.++..|.++++..++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-------~~~vi~Gd~~~~~~l~~   60 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKIKTLED   60 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-------hhhhccCcccchhhhhh
Confidence            5889998 89999999999999999999999998877665432       35688899999886554

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.47  E-value=0.00069  Score=53.37  Aligned_cols=118  Identities=21%  Similarity=0.273  Sum_probs=76.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC--CCcEEEEEecCCChHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      ++...+.|.|+ |.+|..+|..|+.+|.  ++++.++++++++....++.....  +........|..+           
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~-----------   84 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV-----------   84 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG-----------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh-----------
Confidence            44456777796 9999999999999985  899999999888877777765321  2222333334322           


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                               ...-|++|..||..... ..+.+   +.++.|    ..+.+.+.+.+.+....+.++++|..
T Consensus        85 ---------~~~adivvitag~~~~~-~~~R~---dll~~N----~~i~~~i~~~i~~~~p~~ivivvtNP  138 (159)
T d2ldxa1          85 ---------SANSKLVIITAGARMVS-GQTRL---DLLQRN----VAIMKAIVPGVIQNSPDCKIIVVTNP  138 (159)
T ss_dssp             ---------GTTEEEEEECCSCCCCT-TTCSS---CTTHHH----HHHHHHHTTTHHHHSTTCEEEECSSS
T ss_pred             ---------hccccEEEEecccccCC-CCCHH---HHHHHH----HHHHHHHHHHHhccCCCeEEEEeCCc
Confidence                     24589999999975322 12211   224444    34456677777665546788887753

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.44  E-value=0.00081  Score=52.20  Aligned_cols=115  Identities=14%  Similarity=0.212  Sum_probs=70.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHhhc-CCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++.+.|.|+ |.+|..+|..|+.+|  .+|++.++++++.+....++.... ..........|..+              
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~--------------   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSD--------------   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGG--------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHH--------------
Confidence            456888896 899999999999998  489999999988777666665421 12233444444321              


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                            ...-|++|..||..... .   +.-.+.+..|.    .+++.+.+.+.+....+.++++|-
T Consensus        70 ------~~~adivvitag~~~~~-g---~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvtN  122 (146)
T d1ez4a1          70 ------CKDADLVVITAGAPQKP-G---ESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAAN  122 (146)
T ss_dssp             ------GTTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             ------hccccEEEEecccccCC-C---CCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeCC
Confidence                  13479999999974221 1   11233455554    445555555555543566666664

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.39  E-value=0.00026  Score=56.53  Aligned_cols=80  Identities=14%  Similarity=0.129  Sum_probs=55.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.+++|.|++|++|..++..+...|+ +|+++++++++.+.+.+ +     +.. +  ..|.++.+..++..+.    .
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~-----Ga~-~--~i~~~~~~~~~~~~~~----~   93 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A-----GAD-Y--VINASMQDPLAEIRRI----T   93 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H-----TCS-E--EEETTTSCHHHHHHHH----T
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c-----CCc-e--eeccCCcCHHHHHHHH----h
Confidence            378999999999999999999998995 89999999877655543 2     332 2  2344444433333222    1


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+.+|+++.++|.
T Consensus        94 ----~~~~~d~vid~~g~  107 (170)
T d1jvba2          94 ----ESKGVDAVIDLNNS  107 (170)
T ss_dssp             ----TTSCEEEEEESCCC
T ss_pred             ----hcccchhhhccccc
Confidence                23569999999885

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.39  E-value=5.4e-05  Score=60.69  Aligned_cols=43  Identities=28%  Similarity=0.411  Sum_probs=37.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      ++.+|||+||+||+|...+.-....|++|+.+++++++.+.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~   65 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK   65 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH
Confidence            3668999999999999999888888999999999988876654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.36  E-value=0.00037  Score=55.83  Aligned_cols=76  Identities=17%  Similarity=0.170  Sum_probs=58.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++++|.|+|-|+ ||.+++++..|.+.+.+|+++.|+.++++...+.+...   ..+.....|-.               
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~---------------   75 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI---------------   75 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC---------------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc---------------
Confidence            356899999987 77899999999998889999999999999988887543   24455544421               


Q ss_pred             HhccCCCCCccEEEeccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~  159 (369)
                           .....|++||+..+.
T Consensus        76 -----~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 -----PLQTYDLVINATSAG   90 (171)
T ss_dssp             -----CCSCCSEEEECCCC-
T ss_pred             -----cccccceeeeccccc
Confidence                 235689999998764

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=0.00029  Score=58.96  Aligned_cols=79  Identities=19%  Similarity=0.243  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEeCC----------------CCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEec
Q 017580           59 TGIKRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD  122 (369)
Q Consensus        59 ~~~~~k~vlITGa----------------s~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D  122 (369)
                      .+++|+.||||+|                ||-.|.++|+++..+|++|+++.-....           .+...+..+.. 
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~~~~-   69 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKRVDV-   69 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEEEEC-
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-----------Cccccccccee-
Confidence            4789999999998                7889999999999999999988765321           11234444433 


Q ss_pred             CCChHHHHHHHHHHHHHHhccCCCCCccEEEeccccc
Q 017580          123 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       123 ls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                       .+.++..   +.+.+.+      ...|++|++|.+.
T Consensus        70 -~t~~~m~---~~~~~~~------~~~D~~i~aAAvs   96 (223)
T d1u7za_          70 -MTALEME---AAVNASV------QQQNIFIGCAAVA   96 (223)
T ss_dssp             -CSHHHHH---HHHHHHG------GGCSEEEECCBCC
T ss_pred             -hhhHHHH---HHHHhhh------ccceeEeeeechh
Confidence             3444443   3333322      3479999999986

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.33  E-value=0.0028  Score=49.76  Aligned_cols=118  Identities=16%  Similarity=0.209  Sum_probs=77.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.++.+.|.|+ |.+|..+|..|+.+|.  ++++.+++++..+....++....  ..........|..+           
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~-----------   85 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV-----------   85 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG-----------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh-----------
Confidence            44567888897 9999999999999996  89999999988877777775421  12233333334332           


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                               ...-|++|..||.... +..+.   .+.+..|+    .+++.+.+.+.+....+-++++|..
T Consensus        86 ---------~~~adiVVitAg~~~~-~g~tR---~~l~~~N~----~i~~~i~~~i~~~~p~aiiivvtNP  139 (160)
T d1i0za1          86 ---------TANSKIVVVTAGVRQQ-EGESR---LNLVQRNV----NVFKFIIPQIVKYSPDCIIIVVSNP  139 (160)
T ss_dssp             ---------GTTCSEEEECCSCCCC-TTCCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             ---------cccccEEEEecCCccc-cCcch---HHHHHHHH----HHHHHHHHHHHhcCCCcEEEEeCCc
Confidence                     1347999999997532 12222   23444454    4556666666665445777777753

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00079  Score=53.66  Aligned_cols=80  Identities=21%  Similarity=0.249  Sum_probs=55.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |.+|+|.|+ |++|...+..+...|+ +|+++++++++++.++ ++     +.. +++..+-.+..+..+..+.-     
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~-~~~~~~~~~~~~~~~~~~~~-----   93 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LVLQISKESPQEIARKVEGQ-----   93 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EEEECSSCCHHHHHHHHHHH-----
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCc-cccccccccccccccccccc-----
Confidence            679999987 9999999999999999 8999999988876543 22     322 23333334444443333322     


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ....+|++|.++|.
T Consensus        94 ---~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          94 ---LGCKPEVTIECTGA  107 (171)
T ss_dssp             ---HTSCCSEEEECSCC
T ss_pred             ---CCCCceEEEeccCC
Confidence               23579999999985

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=0.00046  Score=56.07  Aligned_cols=104  Identities=13%  Similarity=0.130  Sum_probs=61.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++|+|+||+||+|...++-.-..|++ |+.+++++++...+..++     +..   ...|..+++ ..+..+++     
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad---~vi~~~~~~-~~~~~~~~-----   96 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD---AAVNYKTGN-VAEQLREA-----   96 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS---EEEETTSSC-HHHHHHHH-----
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce---EEeeccchh-HHHHHHHH-----
Confidence            489999999999999999888889986 555566666555544443     222   233555433 22223332     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  210 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~~~  210 (369)
                         ....+|+++.+.|-         +.++               ..++.++.   .||+|.+++.++.
T Consensus        97 ---~~~GvDvv~D~vGg---------~~~~---------------~~~~~l~~---~G~iv~~G~~s~~  135 (187)
T d1vj1a2          97 ---CPGGVDVYFDNVGG---------DISN---------------TVISQMNE---NSHIILCGQISQY  135 (187)
T ss_dssp             ---CTTCEEEEEESSCH---------HHHH---------------HHHTTEEE---EEEEEEC------
T ss_pred             ---hccCceEEEecCCc---------hhHH---------------HHhhhccc---cccEEEecccccc
Confidence               23569999999872         1111               23334433   5899999887664

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00029  Score=56.83  Aligned_cols=42  Identities=29%  Similarity=0.376  Sum_probs=37.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      +.+++|+||+||+|...+.-.-..|++|+.+++++++.+.+.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~   73 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence            568999999999999999988889999999999988865543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.15  E-value=0.00098  Score=53.48  Aligned_cols=79  Identities=13%  Similarity=0.174  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHH-HHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~-i~~~~~~i~~~  139 (369)
                      .|.+|+|+|+ ||+|...+..+...|+ +|+++++++++++-+++.      +....+   |.++.+. .+...+ ..  
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~------GA~~~i---n~~~~~~~~~~~~~-~~--   95 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV------GATECI---SPKDSTKPISEVLS-EM--   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH------TCSEEE---CGGGCSSCHHHHHH-HH--
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc------CCcEEE---CccccchHHHHHHH-Hh--
Confidence            4889999987 8999999999999996 899999999988755433      333222   3333222 222222 22  


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ....+|++|.+.|.
T Consensus        96 -----~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          96 -----TGNNVGYTFEVIGH  109 (176)
T ss_dssp             -----HTSCCCEEEECSCC
T ss_pred             -----ccccceEEEEeCCc
Confidence                 23579999999885

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.15  E-value=0.0005  Score=55.14  Aligned_cols=79  Identities=13%  Similarity=0.209  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~  139 (369)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+++++++++.+.+.+.      +....   .|..+ .+.+.+..+..   
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~------Ga~~~---i~~~~~~~~~~~~~~~~---   94 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV------GATEC---VNPQDYKKPIQEVLTEM---   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCSEE---ECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh------CCeeE---EecCCchhHHHHHHHHH---
Confidence            4789999999 6899999999999996 899999999887654322      22211   22222 23333333332   


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+.+|++|.+.|.
T Consensus        95 -----~~~G~D~vid~~G~  108 (176)
T d2jhfa2          95 -----SNGGVDFSFEVIGR  108 (176)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----hcCCCCEEEecCCc
Confidence                 34689999999986

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.13  E-value=0.0027  Score=48.69  Aligned_cols=113  Identities=19%  Similarity=0.235  Sum_probs=71.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           66 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +.|.|+ |.+|..+|..++.+|.  ++++.++++++++....++....+ .........|..+                 
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~-----------------   64 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYAD-----------------   64 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGG-----------------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHH-----------------
Confidence            556697 8999999999999984  899999999888776666654321 2233443333221                 


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                         ...-|++|..||..... ..+.   .+.+..|.    .+++.+.+.+.+....+.++++|-.
T Consensus        65 ---~~~adivvitag~~~~~-g~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvtNP  118 (140)
T d1a5za1          65 ---LKGSDVVIVAAGVPQKP-GETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVTNP  118 (140)
T ss_dssp             ---GTTCSEEEECCCCCCCS-SCCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             ---hcCCCEEEEecccccCC-Ccch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeCCc
Confidence               13479999999975322 2222   23344453    3556666666665445777777753

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.12  E-value=0.0044  Score=47.74  Aligned_cols=113  Identities=20%  Similarity=0.269  Sum_probs=67.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcc--hHHHHHHHHHhhc----CCCcEEEEEecCCChHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSH--LLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~--~~~~~~~~~~~~~----~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+.|.||+|.+|..+|..|+.+|.  ++++++++++  +++....++....    ...++.....+  +.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~---------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLR---------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHH---------
Confidence            388999999999999999999994  8999999863  3455555555421    12233333322  211         


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  205 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vs  205 (369)
                              ....-|++|.+||... .+..+.   .+.++.|..=    ++.+.+.+.+.. +..|+.||
T Consensus        71 --------~l~~aDvVVitAG~~~-~~g~sR---~dl~~~Na~i----v~~i~~~i~~~~-~~~iivVt  122 (145)
T d1hyea1          71 --------IIDESDVVIITSGVPR-KEGMSR---MDLAKTNAKI----VGKYAKKIAEIC-DTKIFVIT  122 (145)
T ss_dssp             --------GGTTCSEEEECCSCCC-CTTCCH---HHHHHHHHHH----HHHHHHHHHHHC-CCEEEECS
T ss_pred             --------HhccceEEEEeccccc-CCCCCh---hhhhhhhHHH----HHHHHHHHhccC-CCeEEEEc
Confidence                    1235899999999742 222232   2455666544    444555554433 34565554

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.10  E-value=0.0031  Score=48.99  Aligned_cols=121  Identities=13%  Similarity=0.136  Sum_probs=75.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhh--cCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ..+.|.|+ |++|..+|..++.++. ++++.++++++++....++...  ....+..+...|-  .+             
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~~-------------   67 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--YD-------------   67 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--GG-------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--cc-------------
Confidence            35777796 8999999998888885 8999999998888777776542  1123333443321  11             


Q ss_pred             hccCCCCCccEEEeccccccCCCCCC-HHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLT-PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                          ....-|++|..||......+.+ ...-...+..|.    -+++.+.+.+++...++.++++|-..
T Consensus        68 ----~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtNPv  128 (150)
T d1t2da1          68 ----DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTNPV  128 (150)
T ss_dssp             ----GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred             ----ccCCCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecCch
Confidence                1235899999999753322211 112233456664    45555666555544357777777543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.08  E-value=0.002  Score=50.31  Aligned_cols=124  Identities=15%  Similarity=0.184  Sum_probs=73.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +.+.+.|.|+ |.+|..+|..|+..|. ++++.+.++++++.....+....  .+........+  +.+      +.+  
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--~~~------~~~--   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEY--SYE------AAL--   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEEC--SHH------HHH--
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccC--chh------hhh--
Confidence            3466777897 9999999999999985 89999999988887777765421  12222222111  111      011  


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCH-HhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTP-EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~-~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                              ..-|++|..||......+.+. ..-.+.+..|.-    +++.+.+.+.+...++.++++|...
T Consensus        75 --------~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~----iv~~i~~~i~~~~p~aiviivsNPv  133 (154)
T d1pzga1          75 --------TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKYCPKTFIIVVTNPL  133 (154)
T ss_dssp             --------TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred             --------cCCCeEEEecccccCCCCCCcccchhhhhhhhHH----HHHHHHHHHHhcCCCcEEEEeCCcH
Confidence                    348999999998633222111 112234444544    3455555555444357777777543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.05  E-value=0.0079  Score=46.07  Aligned_cols=114  Identities=18%  Similarity=0.160  Sum_probs=73.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCC--cchHHHHHHHHHhh-cCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRS--SHLLSETMADITSR-NKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~--~~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+.|+||+|.+|..+|..++.+|.  ++++.+.+  ++.++....++... ...........|..+              
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~--------------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYED--------------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGG--------------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHH--------------
Confidence            478999999999999999999985  79999864  34454444555432 113344444444321              


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                            ...-|++|..||... .+..+   -.+.++.|.    -+++.+.+.+.+....+.++.+|.
T Consensus        68 ------~~~aDiVvitaG~~~-~~g~~---R~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 ------TAGSDVVVITAGIPR-QPGQT---RIDLAGDNA----PIMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             ------GTTCSEEEECCCCCC-CTTCC---HHHHHHHHH----HHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             ------hhhcCEEEEeccccc-ccCCc---hhhHHHHHH----HHHHHHHHHHHhcCCCceEEEecC
Confidence                  134899999999742 22222   233455554    456677777777654577777765

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.05  E-value=0.00061  Score=54.65  Aligned_cols=78  Identities=13%  Similarity=0.107  Sum_probs=53.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |.+|+|.|+ ||||...+..+...|+ +|+++++++++.+.+. ++     +..   ..+|..+.+..    +++.+.. 
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-----Ga~---~~i~~~~~~~~----~~v~~~t-   92 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-----GAT---DILNYKNGHIE----DQVMKLT-   92 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-----TCS---EEECGGGSCHH----HHHHHHT-
T ss_pred             CCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-----Ccc---ccccccchhHH----HHHHHHh-
Confidence            788999987 8999999999988998 7999999988766554 23     322   22455543322    2333321 


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ....+|++|.++|.
T Consensus        93 ---~g~G~D~vid~~g~  106 (174)
T d1jqba2          93 ---NGKGVDRVIMAGGG  106 (174)
T ss_dssp             ---TTSCEEEEEECSSC
T ss_pred             ---hccCcceEEEccCC
Confidence               23569999999985

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.02  E-value=0.0018  Score=51.69  Aligned_cols=78  Identities=13%  Similarity=0.189  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~-Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.+|+|.|+ |+||...+..+...|++ |+++++++++++.+. ++     +.. ++  .|..+.+ +.+.+.++    
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~-----Ga~-~~--i~~~~~~-~~~~i~~~----   92 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GAT-HV--INSKTQD-PVAAIKEI----   92 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCS-EE--EETTTSC-HHHHHHHH----
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc-----CCe-EE--EeCCCcC-HHHHHHHH----
Confidence            3789999998 89999999988888984 566777877665544 33     221 22  3555433 33323332    


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+++|++|.+.|.
T Consensus        93 ----t~gg~D~vid~~G~  106 (174)
T d1f8fa2          93 ----TDGGVNFALESTGS  106 (174)
T ss_dssp             ----TTSCEEEEEECSCC
T ss_pred             ----cCCCCcEEEEcCCc
Confidence                34689999999985

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.01  E-value=0.0079  Score=46.21  Aligned_cols=117  Identities=16%  Similarity=0.204  Sum_probs=68.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .+.|+||+|.+|..+|..|+.+|.  ++++.+.++.+.+  ..++.....-...... ..   ..+..+   .+      
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~~~~~~~-~~---~~~~~~---~~------   66 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETRATVKGY-LG---PEQLPD---CL------   66 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSSCEEEEE-ES---GGGHHH---HH------
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhhcCCCeE-Ec---CCChHH---Hh------
Confidence            488999999999999999999995  7999998765432  2344322111111111 11   122211   11      


Q ss_pred             cCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          143 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                          ..-|++|..||.... ...+   -.+.++.|.--.    +.+.+.+.+....+.|+++|...
T Consensus        67 ----~~aDivVitag~~~~-~g~s---R~~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtNPv  120 (144)
T d1mlda1          67 ----KGCDVVVIPAGVPRK-PGMT---RDDLFNTNATIV----ATLTAACAQHCPDAMICIISNPV  120 (144)
T ss_dssp             ----TTCSEEEECCSCCCC-TTCC---GGGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSCH
T ss_pred             ----CCCCEEEECCCcCCC-CCCC---cchHHHHHHHHH----HHHHHHHHhcCCCeEEEEecCch
Confidence                348999999997422 1222   233566666555    44444444443357888887643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.96  E-value=0.00049  Score=52.47  Aligned_cols=59  Identities=17%  Similarity=0.185  Sum_probs=46.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLK  131 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~  131 (369)
                      |.++|.|+ |-+|+.+|+.|.++|.+|++++.|++..+++.        +.....+..|.++++.+.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~--------~~~~~~~~gd~~~~~~l~~   59 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA--------SYATHAVIANATEENELLS   59 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT--------TTCSEEEECCTTCTTHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH--------HhCCcceeeecccchhhhc
Confidence            34667777 78999999999999999999999988766653        1223566789999886654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.96  E-value=0.008  Score=46.10  Aligned_cols=113  Identities=15%  Similarity=0.167  Sum_probs=70.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhh--cCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .+.|.|+ |.+|..+|..++.+|.  ++++.++++++++....++...  ..+.......-|..+               
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~---------------   66 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI---------------   66 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG---------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHH---------------
Confidence            3666697 9999999999999996  8999999998877766666542  212221222223221               


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                           ...-|++|..||.... +..+..   +.+..|.    .+++.+.+.+.+....+.++++|-
T Consensus        67 -----~~daDvVVitaG~~~~-~g~~R~---dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          67 -----CRDADMVVITAGPRQK-PGQSRL---ELVGATV----NILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             -----GTTCSEEEECCCCCCC-TTCCHH---HHHHHHH----HHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             -----hhCCcEEEEecccccC-CCCchh---hhhhhhH----HHHHHHHHHHHhhCCCeEEEEeCC
Confidence                 1237999999997522 223322   3455554    445555555555543566666664

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.96  E-value=0.0046  Score=48.17  Aligned_cols=116  Identities=9%  Similarity=0.092  Sum_probs=68.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC---------EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF---------HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~---------~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      .|.|+||+|.+|..++..|+..+.         +++...++.++++....++..... .....+...-.+.+        
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF-PLLAGLEATDDPKV--------   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc-ccccccccCCchhh--------
Confidence            699999999999999999998763         344445566666666666554332 22333333222211        


Q ss_pred             HHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-CCCCeEEEEcC
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTS  206 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~~g~IV~vsS  206 (369)
                               .....|++|..||... .+..+.+   +.+..|+.    +++.+.+.+.+. +..+.|+.+|.
T Consensus        77 ---------~~~~advViitaG~~~-~pg~~r~---dl~~~N~~----i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          77 ---------AFKDADYALLVGAAPR-KAGMERR---DLLQVNGK----IFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             ---------HTTTCSEEEECCCCCC-CTTCCHH---HHHHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---------hcccccEEEeecCcCC-CCCCcHH---HHHHHHHH----HHHHHHHHHHHhCCCCcEEEEecC
Confidence                     1345899999999852 2233333   33454543    445555555542 22456766664

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.95  E-value=0.0022  Score=50.84  Aligned_cols=76  Identities=16%  Similarity=0.186  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++++.+.+ +     +... ++  |-.+.+..   .   ++   
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-l-----Ga~~-~i--~~~~~~~~---~---~~---   87 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADH-YI--ATLEEGDW---G---EK---   87 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE-EE--EGGGTSCH---H---HH---
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-c-----CCcE-Ee--eccchHHH---H---Hh---
Confidence            3789999997 899999888877889999999999988776543 3     3332 22  22222211   1   12   


Q ss_pred             ccCCCCCccEEEeccccc
Q 017580          142 DSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~  159 (369)
                         ..+..|+++.+.|..
T Consensus        88 ---~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          88 ---YFDTFDLIVVCASSL  102 (168)
T ss_dssp             ---SCSCEEEEEECCSCS
T ss_pred             ---hhcccceEEEEecCC
Confidence               346799999987754

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.95  E-value=0.0057  Score=46.91  Aligned_cols=114  Identities=16%  Similarity=0.216  Sum_probs=68.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           66 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +.|+|| |.+|..++..|+.+|.  ++++.++++++++.....+....  ......+...  .+.+.             
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-------------   66 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-------------   66 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-------------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-------------
Confidence            667797 8999999999999984  89999999988776665554321  1223333322  22221             


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                          ...-|++|..||..... ..+.   .+.++.|.-    +++.+.+.+.+....+.++++|-.
T Consensus        67 ----~~dadvvvitag~~~~~-g~~r---~~l~~~N~~----i~~~i~~~i~~~~p~aivivvtNP  120 (142)
T d1guza1          67 ----TANSDIVIITAGLPRKP-GMTR---EDLLMKNAG----IVKEVTDNIMKHSKNPIIIVVSNP  120 (142)
T ss_dssp             ----GTTCSEEEECCSCCCCT-TCCH---HHHHHHHHH----HHHHHHHHHHHHCSSCEEEECCSS
T ss_pred             ----hcCCeEEEEEEecCCCC-CCch---HHHHHHHHH----HHHHHHHHhhccCCCeEEEEecCC
Confidence                23479999999975322 1221   233444544    344445444443335677777643

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.93  E-value=0.0015  Score=52.30  Aligned_cols=79  Identities=15%  Similarity=0.306  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHH-HHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~-i~~~~~~i~~~  139 (369)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++.+.+ +     +... +  .|.++.+. +.+.....   
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l-----Ga~~-~--i~~~~~d~~~~~~~~~~---   93 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L-----GATE-C--LNPKDYDKPIYEVICEK---   93 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T-----TCSE-E--ECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c-----CCcE-E--EcCCCchhHHHHHHHHh---
Confidence            4889999996 8999999999999997 79999999998866542 2     3221 1  34333221 22222221   


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+.+|++|-++|.
T Consensus        94 -----~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 -----TNGGVDYAVECAGR  107 (174)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----cCCCCcEEEEcCCC
Confidence                 45689999999885

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.93  E-value=0.00089  Score=53.78  Aligned_cols=50  Identities=18%  Similarity=0.395  Sum_probs=43.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN  111 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~  111 (369)
                      +++||.|+|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+....
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~   64 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL   64 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhh
Confidence            467999999987 679999999998777 99999999999999988886654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.90  E-value=0.0019  Score=49.79  Aligned_cols=114  Identities=11%  Similarity=0.160  Sum_probs=69.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEE-ecCCChHHHHHHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN--KDARLEAFQ-VDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~-~Dls~~~~i~~~~~~i~~~  139 (369)
                      +.+.|.|+ |.+|..+|..|+.++. ++++.+.+++..+....++....  .+....+.. -|..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            35666696 9999999999999985 99999999988777666664321  112222222 23322              


Q ss_pred             HhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          140 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                            ...-|++|.+||..... ..+   -.+.+..|+    .+++.+.+.+.+....+.++++|-
T Consensus        67 ------~~~advvvitag~~~~~-~~~---r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          67 ------TANSDVIVVTSGAPRKP-GMS---REDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             ------GTTCSEEEECCSCC-------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             ------hcCCCEEEEeeeccCCc-Ccc---hhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence                  13478999999975321 111   223455554    466777777766553567777664

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0033  Score=49.70  Aligned_cols=74  Identities=19%  Similarity=0.173  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++|+|.|+ ||||...+..+-..|++++++++++++.+.+ +++     +...   .+|..+.+...       .   
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~l-----Gad~---~i~~~~~~~~~-------~---   89 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KAL-----GADE---VVNSRNADEMA-------A---   89 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHH-----TCSE---EEETTCHHHHH-------T---
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hcc-----CCcE---EEECchhhHHH-------H---
Confidence            3789999986 8999999988888999999999998876543 333     3221   24555543211       1   


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+++|+++.++|.
T Consensus        90 ---~~~~~D~vid~~g~  103 (168)
T d1uufa2          90 ---HLKSFDFILNTVAA  103 (168)
T ss_dssp             ---TTTCEEEEEECCSS
T ss_pred             ---hcCCCceeeeeeec
Confidence               33579999999985

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.85  E-value=0.014  Score=46.33  Aligned_cols=117  Identities=9%  Similarity=0.034  Sum_probs=67.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  134 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~  134 (369)
                      -.|.||||+|.||..++..|++.+.       .+.+.+.+.  +.++...-+++.......-.....  ++..      +
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~~------~   96 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDPY------E   96 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCHH------H
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccch------h
Confidence            3699999999999999999998532       456666554  345555555554322221222222  2211      1


Q ss_pred             HHHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcC-CCCCeEEEEcC
Q 017580          135 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTS  206 (369)
Q Consensus       135 ~i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~~g~IV~vsS  206 (369)
                                .....|++|..||... .+..+.   .+.++.|.    .+.+.+.+.+.+. +...+|+.+|-
T Consensus        97 ----------~~~~aDvVvi~ag~~r-kpg~tR---~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          97 ----------VFEDVDWALLIGAKPR-GPGMER---AALLDING----QIFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             ----------HTTTCSEEEECCCCCC-CTTCCH---HHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ----------hccCCceEEEeeccCC-CCCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEecC
Confidence                      2356999999999752 223333   34555564    3445555555552 22456666664

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.83  E-value=0.0043  Score=47.68  Aligned_cols=114  Identities=16%  Similarity=0.152  Sum_probs=66.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhcCC-CcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+.|.|+ |.+|..+|..++.+|.  ++++.++++++++....++....+- ........|   .++             
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~~-------------   65 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YSD-------------   65 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GGG-------------
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HHH-------------
Confidence            3555597 9999999999999985  8999999998877666666543221 222222222   221             


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                          ...-|++|..||..... ..+   -.+.+..|.    .+++.+.+.+.+....+.++++|-.
T Consensus        66 ----~~~adivvitag~~~~~-~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtNP  119 (142)
T d1y6ja1          66 ----VKDCDVIVVTAGANRKP-GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSNP  119 (142)
T ss_dssp             ----GTTCSEEEECCCC-------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSSS
T ss_pred             ----hCCCceEEEecccccCc-Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEecCh
Confidence                23479999999975321 222   223455554    4555666666654435677777653

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.82  E-value=0.0017  Score=51.77  Aligned_cols=79  Identities=14%  Similarity=0.234  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC-hHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~i~~~~~~i~~~  139 (369)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++.+.+ +++     +... +  .|..+ .+.+.+..++.   
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~l-----Ga~~-~--i~~~~~~~~~~~~~~~~---   94 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF-----GATE-C--INPQDFSKPIQEVLIEM---   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH-----TCSE-E--ECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HHh-----CCcE-E--EeCCchhhHHHHHHHHH---
Confidence            3789999998 5999999999999997 677788888776543 344     3221 2  23322 23333333332   


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+++|+++.+.|.
T Consensus        95 -----~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 -----TDGGVDYSFECIGN  108 (176)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----cCCCCcEeeecCCC
Confidence                 34679999999985

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.76  E-value=0.0022  Score=51.23  Aligned_cols=79  Identities=14%  Similarity=0.246  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCCh-HHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~i~~~~~~i~~~  139 (369)
                      .|.+|+|.|+ ||||...+..+...|+ +|+++++++++++-+. ++     +... +  .|..+. +.+....+..   
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~-----Ga~~-~--i~~~~~~~~~~~~~~~~---   94 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GATD-C--LNPRELDKPVQDVITEL---   94 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE-E--ECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-Hh-----CCCc-c--cCCccchhhhhhhHhhh---
Confidence            3789999986 9999999999999998 6888999988764433 22     2221 2  233222 2333333332   


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+.+|++|.++|.
T Consensus        95 -----~~~G~d~vie~~G~  108 (174)
T d1e3ia2          95 -----TAGGVDYSLDCAGT  108 (174)
T ss_dssp             -----HTSCBSEEEESSCC
T ss_pred             -----hcCCCcEEEEeccc
Confidence                 23689999999985

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.74  E-value=0.0077  Score=46.18  Aligned_cols=113  Identities=18%  Similarity=0.153  Sum_probs=71.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEe-cCCChHHHHHHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQV-DLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~-Dls~~~~i~~~~~~i~~~~  140 (369)
                      +.|.|+ |.+|..+|..++.+|.  ++++.++++++++....++....  .+........ |..+               
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~---------------   66 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL---------------   66 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG---------------
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH---------------
Confidence            566796 9999999999999985  79999999988777666665421  1222233332 3321               


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                           ...-|++|..||.... +..+.   .+.+..|    ..+.+.+.+.+.+....+.++++|-.
T Consensus        67 -----~~~adiVvitag~~~~-~g~~r---~~l~~~n----~~i~~~i~~~i~~~~p~aivivvtNP  120 (142)
T d1ojua1          67 -----LKGSEIIVVTAGLARK-PGMTR---LDLAHKN----AGIIKDIAKKIVENAPESKILVVTNP  120 (142)
T ss_dssp             -----GTTCSEEEECCCCCCC-SSCCH---HHHHHHH----HHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             -----hccccEEEEeccccCC-CCCch---HHHHHHh----hHHHHHHHHHHHhhCCCcEEEEecCC
Confidence                 2347899999996422 22222   2334444    34556666666665545677777753

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.70  E-value=0.0026  Score=50.11  Aligned_cols=41  Identities=22%  Similarity=0.273  Sum_probs=35.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      |++|+|.|+ |++|...+.-+...|++|+++++++++++.+.
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~   68 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR   68 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh
Confidence            789999886 99999999988888999999999988776543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.66  E-value=0.0066  Score=47.03  Aligned_cols=76  Identities=13%  Similarity=0.083  Sum_probs=58.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      ..++|.|. +-+|..++++|.++|.+|+++..++++.....++..    ...+.++..|.++++.++++           
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~----~~~~~vi~Gd~~d~~~L~~a-----------   67 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKA-----------   67 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHH-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh----cCCcEEEEccCcchHHHHHh-----------
Confidence            36888888 589999999999999999999999876655555543    33678899999998765543           


Q ss_pred             CCCCCccEEEecc
Q 017580          144 DMHSSIQLLINNA  156 (369)
Q Consensus       144 ~~~~~id~lv~nA  156 (369)
                       .....+.+|...
T Consensus        68 -~i~~a~~vi~~~   79 (153)
T d1id1a_          68 -GIDRCRAILALS   79 (153)
T ss_dssp             -TTTTCSEEEECS
T ss_pred             -ccccCCEEEEcc
Confidence             234577777654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.64  E-value=0.0031  Score=50.12  Aligned_cols=77  Identities=17%  Similarity=0.158  Sum_probs=51.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |.+|+|.|+ |++|...+..+...|+ +|+.+++++++++.+.+.      +.. ++  .|-++ +.+++..+..     
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~------ga~-~~--i~~~~-~~~~~~~~~~-----   96 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL------GAD-HV--VDARR-DPVKQVMELT-----   96 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT------TCS-EE--EETTS-CHHHHHHHHT-----
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc------ccc-ee--ecCcc-cHHHHHHHhh-----
Confidence            789999986 9999999998888886 778888888776554422      222 22  23332 3333333221     


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ....+|++|.++|.
T Consensus        97 ---~~~g~d~vid~~g~  110 (172)
T d1h2ba2          97 ---RGRGVNVAMDFVGS  110 (172)
T ss_dssp             ---TTCCEEEEEESSCC
T ss_pred             ---CCCCceEEEEecCc
Confidence               23569999999985

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.026  Score=43.23  Aligned_cols=117  Identities=16%  Similarity=0.217  Sum_probs=69.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-C--CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           65 VCIVTGATSGLGAAAAYALSRE-G--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~-G--~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+.|+|++|.+|.++|..|+.+ +  .++++.+.++ ..+....++...........+ .+-.+.+.       +     
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~~~~~~-------~-----   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGEDATPA-------L-----   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSSCCHHH-------H-----
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcCCCccc-------c-----
Confidence            4789999999999999988754 4  5899999865 455555555543222222222 22223221       1     


Q ss_pred             ccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017580          142 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  208 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~~  208 (369)
                           ..-|++|..||.... +..+   -.+.++.|.-    +++.+.+.+.+...++.|+++|...
T Consensus        68 -----~~aDvvvitaG~~~k-~g~~---R~dl~~~N~~----i~~~v~~~i~~~~p~aivivvtNPv  121 (145)
T d2cmda1          68 -----EGADVVLISAGVRRK-PGMD---RSDLFNVNAG----IVKNLVQQVAKTCPKACIGIITNPV  121 (145)
T ss_dssp             -----TTCSEEEECCSCCCC-TTCC---GGGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred             -----CCCCEEEECCCccCC-CCcc---hhhHHHHHHH----HHHHHHHHHHhhCCCcEEEEccCCc
Confidence                 237999999997522 1222   2345666644    3444555555443357777777643

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.55  E-value=0.0049  Score=48.90  Aligned_cols=79  Identities=14%  Similarity=0.273  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHH-HHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~-i~~~~~~i~~~  139 (369)
                      .|.+|+|.|+ +|+|...+..++..|+ +|+.+++++++++.+.+ +     +.. +  .+|.++.+. +++..+..   
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~-----GAd-~--~in~~~~~~~~~~~~~~~---   94 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F-----GAT-D--FVNPNDHSEPISQVLSKM---   94 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCC-E--EECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c-----CCc-E--EEcCCCcchhHHHHHHhh---
Confidence            3789999986 7788888888888887 79999999988765442 2     322 2  224333322 23333322   


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+.+|+++.++|.
T Consensus        95 -----~~~G~d~vid~~G~  108 (175)
T d1cdoa2          95 -----TNGGVDFSLECVGN  108 (175)
T ss_dssp             -----HTSCBSEEEECSCC
T ss_pred             -----ccCCcceeeeecCC
Confidence                 23679999999985

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.48  E-value=0.0062  Score=49.41  Aligned_cols=80  Identities=16%  Similarity=0.116  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.+|+|.|+ |++|...+......|+ +|+++++++++++.+.+.      +...   ..|-.+ +++.+...++.   
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~------Ga~~---~~~~~~-~~~~~~i~~~t---   90 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ------GFEI---ADLSLD-TPLHEQIAALL---   90 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCEE---EETTSS-SCHHHHHHHHH---
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc------cccE---EEeCCC-cCHHHHHHHHh---
Confidence            3889999987 8999888888877887 899999998877654322      3321   233333 33333333332   


Q ss_pred             hccCCCCCccEEEeccccc
Q 017580          141 LDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~  159 (369)
                          ....+|++|.+.|..
T Consensus        91 ----~g~g~D~vid~vG~~  105 (195)
T d1kola2          91 ----GEPEVDCAVDAVGFE  105 (195)
T ss_dssp             ----SSSCEEEEEECCCTT
T ss_pred             ----CCCCcEEEEECcccc
Confidence                346799999999853

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.37  E-value=0.0017  Score=46.07  Aligned_cols=38  Identities=8%  Similarity=0.077  Sum_probs=33.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      +++||+++|.|. |.-|.++|+.|+++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            678999999999 66799999999999999999998654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.34  E-value=0.00076  Score=55.30  Aligned_cols=43  Identities=12%  Similarity=0.282  Sum_probs=37.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      +++||+|+|.| .|.+|..+|+.|.+.|++|++.+.+.+.+...
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            58899999998 57799999999999999999999887765543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.23  E-value=0.003  Score=50.05  Aligned_cols=45  Identities=24%  Similarity=0.308  Sum_probs=39.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~  107 (369)
                      ++|.|+|-|+ ||.|++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            3577999988 8999999999999997 7999999999888776654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.19  E-value=0.04  Score=42.52  Aligned_cols=116  Identities=12%  Similarity=0.163  Sum_probs=63.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-------EEEEEeCCc--chHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~-------~Vvl~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      .|.|+||+|.+|..+|..|+..+.       .+++.+.++  .+++....++..............+= +.+        
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~--------   75 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDK-EEI--------   75 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESC-HHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcc-ccc--------
Confidence            699999999999999999987652       466666554  33444443333322111112222111 111        


Q ss_pred             HHHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhc-CCCCCeEEEEcC
Q 017580          136 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN-SPVPSRIVNVTS  206 (369)
Q Consensus       136 i~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~~~~g~IV~vsS  206 (369)
                               .....|++|..||......+ +.+   +.++.|.    .+++.+.+.+.+ .+..+.++.+|.
T Consensus        76 ---------~~~~~dvVVitag~~~~~g~-sr~---dll~~N~----~i~k~~~~~i~k~a~~~~~iivvsN  130 (154)
T d5mdha1          76 ---------AFKDLDVAILVGSMPRRDGM-ERK---DLLKANV----KIFKCQGAALDKYAKKSVKVIVVGN  130 (154)
T ss_dssp             ---------HTTTCSEEEECCSCCCCTTC-CTT---TTHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---------ccCCceEEEEecccCCCCCC-chh---HHHHHhH----HHHHHHHHHHHhhCCCceEEEEecC
Confidence                     13458999999997533222 222   2345554    444555555544 332355666664

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.12  E-value=0.013  Score=45.92  Aligned_cols=69  Identities=22%  Similarity=0.188  Sum_probs=47.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH--------hhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT--------SRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~--------~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +.|.|+ |-+|..+|+.|.+.|++|++.+|+++..+++.+.-.        +...+..+.++.+   ..++++++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            555665 899999999999999999999999887766554310        1112344444433   3567777777776


Q ss_pred             H
Q 017580          138 Q  138 (369)
Q Consensus       138 ~  138 (369)
                      .
T Consensus        79 ~   79 (165)
T d2f1ka2          79 P   79 (165)
T ss_dssp             G
T ss_pred             h
Confidence            5

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.08  E-value=0.0046  Score=45.41  Aligned_cols=39  Identities=13%  Similarity=0.240  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      .+++||+++|.|++. +|..-++.|++.|++|++++....
T Consensus         8 l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            478899999999965 999999999999999999887654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0095  Score=51.42  Aligned_cols=25  Identities=28%  Similarity=0.426  Sum_probs=22.3

Q ss_pred             CCchHHHHHHHHHHCCCEEEEEeCC
Q 017580           72 TSGLGAAAAYALSREGFHVVLVGRS   96 (369)
Q Consensus        72 s~gIG~~~a~~La~~G~~Vvl~~r~   96 (369)
                      ||..|.++|+.+..+|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            6789999999999999999998654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0057  Score=49.51  Aligned_cols=45  Identities=27%  Similarity=0.381  Sum_probs=39.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHh
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  109 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~  109 (369)
                      |.|.|.|| |-+|..+|..++..|++|++.+++++.++.+.+.+++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            57889999 6799999999999999999999999888877776643

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.94  E-value=0.014  Score=46.76  Aligned_cols=42  Identities=21%  Similarity=0.069  Sum_probs=36.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   99 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~   99 (369)
                      ...++.||++.|.|. |.||+++|+.+..-|++|+..++....
T Consensus        38 ~~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          38 SGTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            345688999999995 789999999999999999999987654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.79  E-value=0.0072  Score=48.06  Aligned_cols=41  Identities=22%  Similarity=0.149  Sum_probs=36.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA  105 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~  105 (369)
                      |++.|.|| |.+|.++|..|+++|++|.+.+|++++.+...+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            68889998 889999999999999999999999887766554

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.78  E-value=0.054  Score=43.77  Aligned_cols=75  Identities=21%  Similarity=0.331  Sum_probs=57.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +++|++||=-|+++|.   ++..++.+|+ +|++++.++..++.+.+.++..  +.+..++..|+.+.            
T Consensus        44 dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             SSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC------------
T ss_pred             CCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh------------
Confidence            6789999999988762   3334567786 8999999999888888877654  45778888887542            


Q ss_pred             HHhccCCCCCccEEEecccc
Q 017580          139 WLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~  158 (369)
                             .+++|++|.|.-.
T Consensus       107 -------~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 -------NSRVDIVIMNPPF  119 (201)
T ss_dssp             -------CCCCSEEEECCCC
T ss_pred             -------CCcCcEEEEcCcc
Confidence                   3579999999854

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.76  E-value=0.014  Score=44.96  Aligned_cols=68  Identities=18%  Similarity=0.290  Sum_probs=47.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +-+.+.|.||.|-+|..+|+.|.+.|++|.+.+|+.....+...+      +..+.....+   ...+.....++..
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~------~~~~v~~~~~---~~~~~~v~~~~~~   75 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA------NADVVIVSVP---INLTLETIERLKP   75 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT------TCSEEEECSC---GGGHHHHHHHHGG
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh------hccccccccc---hhhheeeeecccc
Confidence            346799999999999999999999999999999987654432211      3344443333   3455555555543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.70  E-value=0.0053  Score=56.15  Aligned_cols=81  Identities=15%  Similarity=0.280  Sum_probs=60.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeC-------------------CcchHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGR-------------------SSHLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++..|+|.|+ ||||.++++.|+..|. ++.+++.                   ...+.+.+++.+++.+++.++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            34667999999 6799999999999998 8999874                   2346777788888888888888888


Q ss_pred             ecCCChHHHHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          121 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       121 ~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      .++.+...  .++             ...|++|++..
T Consensus       114 ~~i~~~~~--~~~-------------~~~DlVi~~~D  135 (426)
T d1yovb1         114 NKIQDFND--TFY-------------RQFHIIVCGLD  135 (426)
T ss_dssp             SCGGGBCH--HHH-------------TTCSEEEECCS
T ss_pred             ccccchHH--HHH-------------HhcchheeccC
Confidence            77765431  111             24788887653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.70  E-value=0.014  Score=49.01  Aligned_cols=65  Identities=20%  Similarity=0.300  Sum_probs=52.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeC-------------------CcchHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGR-------------------SSHLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++++|+|.|+ ||+|..++..|+..|. ++++++.                   ...+.+.+++.+++.+|+.++..+.
T Consensus        28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            56789999995 7899999999999998 8999874                   2357788888888888888888776


Q ss_pred             ecCCCh
Q 017580          121 VDLSSF  126 (369)
Q Consensus       121 ~Dls~~  126 (369)
                      ..+++.
T Consensus       107 ~~~~~~  112 (247)
T d1jw9b_         107 ALLDDA  112 (247)
T ss_dssp             SCCCHH
T ss_pred             hhhhhc
Confidence            666543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.68  E-value=0.034  Score=43.93  Aligned_cols=85  Identities=16%  Similarity=0.225  Sum_probs=58.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH---------------HhhcCCCcEEEEEecCCChHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI---------------TSRNKDARLEAFQVDLSSFQS  128 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~---------------~~~~~~~~v~~~~~Dls~~~~  128 (369)
                      +.|-|.|- |-+|..+|++|++.|++|++.+|++++.+++.++-               .+..  .....+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHH
Confidence            34667776 78999999999999999999999999888775431               1111  122344455667788


Q ss_pred             HHHHHHHHHHHHhccCCCCCccEEEeccc
Q 017580          129 VLKFKDSLQQWLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       129 i~~~~~~i~~~~~~~~~~~~id~lv~nAG  157 (369)
                      +.+..+.+...+      .+=+++|....
T Consensus        80 v~~v~~~l~~~~------~~g~iiid~sT  102 (176)
T d2pgda2          80 VDNFIEKLVPLL------DIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHHC------CTTCEEEECSC
T ss_pred             HHHHHHHHHhcc------ccCcEEEecCc
Confidence            888888777633      23345665543

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.50  E-value=0.035  Score=44.82  Aligned_cols=71  Identities=15%  Similarity=0.149  Sum_probs=53.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      ++.|++|+=-|+++|+   ++..++..|+ +|+.++.+++.++.+.+.+      .++.++.+|+.+.            
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~------~~~~~~~~D~~~l------------  104 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC------GGVNFMVADVSEI------------  104 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC------TTSEEEECCGGGC------------
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc------ccccEEEEehhhc------------
Confidence            6789999999999883   3455777886 7999999988776665543      3578888998542            


Q ss_pred             HHhccCCCCCccEEEecccc
Q 017580          139 WLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~  158 (369)
                             .++.|++|.|.-.
T Consensus       105 -------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 -------SGKYDTWIMNPPF  117 (197)
T ss_dssp             -------CCCEEEEEECCCC
T ss_pred             -------CCcceEEEeCccc
Confidence                   3679999998643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.47  E-value=0.019  Score=46.43  Aligned_cols=40  Identities=15%  Similarity=0.128  Sum_probs=35.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      ..++.||++.|.|. |.||+.+|+.+..-|++|+..++...
T Consensus        38 g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          38 GREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             BCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            45789999999997 57999999999999999999987654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.062  Score=46.47  Aligned_cols=76  Identities=16%  Similarity=0.231  Sum_probs=57.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ++|++||-.|+++|+   ++..+|+.|+ +|++++.++. ...+.+...+.+...++.++..|+.+...           
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~l~~-----------   98 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVHL-----------   98 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCC-----------
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHHhcC-----------
Confidence            468999999999886   5677888897 7999998865 44555555666667789999999887531           


Q ss_pred             HhccCCCCCccEEEecc
Q 017580          140 LLDSDMHSSIQLLINNA  156 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nA  156 (369)
                           ...+.|++|..-
T Consensus        99 -----~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -----PVEKVDVIISEW  110 (311)
T ss_dssp             -----SCSCEEEEEECC
T ss_pred             -----ccccceEEEEee
Confidence                 236799998753

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.37  E-value=0.013  Score=45.80  Aligned_cols=41  Identities=24%  Similarity=0.247  Sum_probs=35.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      |++++|.|+ |+||...+..+...|++|+++++++++++.++
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k   68 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK   68 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh
Confidence            789999976 89999999999999999999999988876543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.37  E-value=0.61  Score=40.07  Aligned_cols=119  Identities=13%  Similarity=0.134  Sum_probs=74.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .+|++||=.++..| |.++  .++..|.+|+.++.++..++.+.+.++..+- .++.++..|..+.      .+...+  
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl-~~~~~i~~d~~~~------~~~~~~--  211 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGL-GNVRVLEANAFDL------LRRLEK--  211 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTC-TTEEEEESCHHHH------HHHHHH--
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCC-CCcceeeccHHHH------hhhhHh--
Confidence            46888997777654 3333  3455567999999999999999888876542 4688888887542      223333  


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                          ...+.|++|.++......    ......    -......+++.+.+.++.   +|.+++.|.
T Consensus       212 ----~~~~fD~Vi~DpP~~~~~----~~~~~~----~~~~~~~l~~~a~~lLkp---GG~Lv~~sc  262 (318)
T d1wxxa2         212 ----EGERFDLVVLDPPAFAKG----KKDVER----AYRAYKEVNLRAIKLLKE---GGILATASC  262 (318)
T ss_dssp             ----TTCCEEEEEECCCCSCCS----TTSHHH----HHHHHHHHHHHHHHTEEE---EEEEEEEEC
T ss_pred             ----hhcCCCEEEEcCCccccc----hHHHHH----HHHHHHHHHHHHHHHcCC---CCEEEEEeC
Confidence                457899999997543221    111111    122344566666666654   466666554

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.35  E-value=0.032  Score=46.49  Aligned_cols=76  Identities=14%  Similarity=0.081  Sum_probs=59.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ..+++||=.|++.|.   ++..|+++|.+|+.++.+++.++.+.+.+...  +.++.++..|+.+.+             
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-------------   97 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-------------   97 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-------------
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-------------
Confidence            346789999999885   78899999999999999999888887776554  446888888887643             


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..++.|++++..+.
T Consensus        98 ----~~~~fD~i~~~~~~  111 (246)
T d1y8ca_          98 ----INRKFDLITCCLDS  111 (246)
T ss_dssp             ----CSCCEEEEEECTTG
T ss_pred             ----ccccccccceeeee
Confidence                23579999876543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.22  E-value=0.0089  Score=48.05  Aligned_cols=45  Identities=20%  Similarity=0.337  Sum_probs=38.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHh
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  109 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~  109 (369)
                      |.|.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~   49 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAK   49 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhh
Confidence            35888888 7799999999999999999999999888877666543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.20  E-value=0.16  Score=44.12  Aligned_cols=118  Identities=10%  Similarity=0.089  Sum_probs=76.3

Q ss_pred             CCEEEEeCCC-CchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGAT-SGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        63 ~k~vlITGas-~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      |++||=.|+. |+++.+    ++..|+ +|+.++.++..++.+.+.++..+-..+++++..|+.+      .......  
T Consensus       146 g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~--  213 (324)
T d2as0a2         146 GDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQK--  213 (324)
T ss_dssp             TCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHH--
T ss_pred             CCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHh--
Confidence            7889988876 444444    446676 8999999999999998888776555678888887642      2233333  


Q ss_pred             hccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017580          141 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  207 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS~  207 (369)
                          ...+.|++|.++-....    +.......    ......+++.+++.++.   +|.+|+.|..
T Consensus       214 ----~~~~fD~Vi~DpP~~~~----~~~~~~~~----~~~y~~l~~~a~~ll~p---GG~lv~~s~s  265 (324)
T d2as0a2         214 ----KGEKFDIVVLDPPAFVQ----HEKDLKAG----LRAYFNVNFAGLNLVKD---GGILVTCSCS  265 (324)
T ss_dssp             ----TTCCEEEEEECCCCSCS----SGGGHHHH----HHHHHHHHHHHHTTEEE---EEEEEEEECC
T ss_pred             ----ccCCCCchhcCCccccC----CHHHHHHH----HHHHHHHHHHHHHHcCC---CcEEEEEeCC
Confidence                45789999988754322    22222222    22445566667777654   4676666643

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.89  E-value=0.084  Score=43.69  Aligned_cols=74  Identities=14%  Similarity=0.199  Sum_probs=57.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      ++++||=.|+++|   .++..|+++|++|++++.++.-++.+.+.+...  +.++.++..|+.+..              
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~--------------  101 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA--------------  101 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC--------------
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc--------------
Confidence            3578999999987   456789999999999999998888888877665  447889999987643              


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         ..+..|++++.-+
T Consensus       102 ---~~~~fD~I~~~~~  114 (251)
T d1wzna1         102 ---FKNEFDAVTMFFS  114 (251)
T ss_dssp             ---CCSCEEEEEECSS
T ss_pred             ---cccccchHhhhhh
Confidence               1246898887543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.81  E-value=0.013  Score=43.80  Aligned_cols=70  Identities=13%  Similarity=0.115  Sum_probs=50.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      |.++|.|. +.+|.+++++|  +|.+|+++..+++..+...        ...+.++..|.++++.++++           
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~--------~~~~~~i~Gd~~~~~~L~~a-----------   58 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL--------RSGANFVHGDPTRVSDLEKA-----------   58 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH--------HTTCEEEESCTTSHHHHHHT-----------
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH--------hcCccccccccCCHHHHHHh-----------
Confidence            46888886 67999999999  4667888898888765543        12567888999998766542           


Q ss_pred             CCCCCccEEEecc
Q 017580          144 DMHSSIQLLINNA  156 (369)
Q Consensus       144 ~~~~~id~lv~nA  156 (369)
                       ...+-+.+|...
T Consensus        59 -~i~~A~~vi~~~   70 (129)
T d2fy8a1          59 -NVRGARAVIVNL   70 (129)
T ss_dssp             -TCTTCSEEEECC
T ss_pred             -hhhcCcEEEEec
Confidence             334566776543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.65  E-value=0.014  Score=45.01  Aligned_cols=36  Identities=22%  Similarity=0.393  Sum_probs=32.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   96 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~   96 (369)
                      .++||++||.|| |.+|..-++.|++.|++|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            478999999999 559999999999999999998754

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.65  E-value=0.16  Score=43.83  Aligned_cols=77  Identities=13%  Similarity=0.190  Sum_probs=56.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .+|++||-.|+++|+   ++..+++.|+ +|+.++.++ ....+.+.+...+...++.++..|+.+.+.           
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~-----------   96 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL-----------   96 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC-----------
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHhCCccccceEeccHHHccc-----------
Confidence            358999999999885   5667788896 799999775 455555555555556679999999877531           


Q ss_pred             HhccCCCCCccEEEeccc
Q 017580          140 LLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG  157 (369)
                           ...++|+++..-.
T Consensus        97 -----~~~~~D~ivs~~~  109 (316)
T d1oria_          97 -----PVEKVDIIISEWM  109 (316)
T ss_dssp             -----SSSCEEEEEECCC
T ss_pred             -----ccceeEEEeeeee
Confidence                 3367999987643

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.40  E-value=0.19  Score=38.29  Aligned_cols=78  Identities=15%  Similarity=0.178  Sum_probs=57.8

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSG-LGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        60 ~~~~k~vlITGas~g-IG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      +++|+.||=.|+++| +|.    +.+.+|+ +|+.++.+++..+.+.+.++..+...++.+++.|..+      +.+   
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            357899997777655 554    4567887 8999999999988888888776656779999998542      122   


Q ss_pred             HHHhccCCCCCccEEEecc
Q 017580          138 QWLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nA  156 (369)
                      .      ...+.|+++.++
T Consensus        79 ~------~~~~fDiIf~DP   91 (152)
T d2esra1          79 C------LTGRFDLVFLDP   91 (152)
T ss_dssp             H------BCSCEEEEEECC
T ss_pred             c------cccccceeEech
Confidence            2      346799998775

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=94.40  E-value=0.058  Score=45.33  Aligned_cols=72  Identities=21%  Similarity=0.236  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|++||=.|+++|+   ++..+++.|++|+.++.++..++.+.+..+..  +.++.++..|+.+         ..     
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~---------~~-----  180 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEA---------AL-----  180 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHH---------HG-----
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEeccccc---------cc-----
Confidence            47899999999986   34457788999999999999999998887665  3455667766421         11     


Q ss_pred             ccCCCCCccEEEec
Q 017580          142 DSDMHSSIQLLINN  155 (369)
Q Consensus       142 ~~~~~~~id~lv~n  155 (369)
                         ..++.|+++.|
T Consensus       181 ---~~~~fD~V~an  191 (254)
T d2nxca1         181 ---PFGPFDLLVAN  191 (254)
T ss_dssp             ---GGCCEEEEEEE
T ss_pred             ---cccccchhhhc
Confidence               23679999977

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.09  E-value=0.44  Score=40.78  Aligned_cols=82  Identities=11%  Similarity=0.076  Sum_probs=56.8

Q ss_pred             CCCEEEEeCCCCc-hHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas~g-IG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      +++.||=..+.+| ++.    .++..|++|+.++.+...++.+.+.+...+- +.++.++..|+.+      ++++..+ 
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~-  200 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREER-  200 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHH-
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhh-
Confidence            4678886666654 333    3456899999999999999998888765543 3468888888742      3333333 


Q ss_pred             HhccCCCCCccEEEeccccc
Q 017580          140 LLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~  159 (369)
                           ...+.|++|.+.-..
T Consensus       201 -----~~~~fD~IilDPP~f  215 (309)
T d2igta1         201 -----RGSTYDIILTDPPKF  215 (309)
T ss_dssp             -----HTCCBSEEEECCCSE
T ss_pred             -----cCCCCCEEEECCCcc
Confidence                 346799999986544

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.01  E-value=0.028  Score=43.57  Aligned_cols=34  Identities=26%  Similarity=0.203  Sum_probs=30.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   99 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~   99 (369)
                      .|.|.|+ |.||..++..|++.|++|.+++|++..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4788888 999999999999999999999998764

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=93.95  E-value=0.043  Score=43.50  Aligned_cols=63  Identities=16%  Similarity=0.151  Sum_probs=49.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc-----------CCCcEEEEEecCCChH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-----------KDARLEAFQVDLSSFQ  127 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~-----------~~~~v~~~~~Dls~~~  127 (369)
                      .|.+||..|++.|   ..+..||++|++|+.++.++..++.+.+..++..           ....+.++..|..+..
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            4789999999987   4777999999999999999998888877764421           1234567788887654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.89  E-value=0.12  Score=40.98  Aligned_cols=77  Identities=14%  Similarity=0.189  Sum_probs=58.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|.+|+=.|+++|   .++..+++.+.+|+.++.+++.++.+.+.++..+-..+++++..|..+.          ..   
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~----------~~---   96 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA----------LC---   96 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH----------HT---
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhc----------cc---
Confidence            3788998999877   3445667778899999999999999999988766556899999885221          11   


Q ss_pred             ccCCCCCccEEEeccc
Q 017580          142 DSDMHSSIQLLINNAG  157 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG  157 (369)
                         .....|.++.+.+
T Consensus        97 ---~~~~~D~v~~~~~  109 (186)
T d1l3ia_          97 ---KIPDIDIAVVGGS  109 (186)
T ss_dssp             ---TSCCEEEEEESCC
T ss_pred             ---ccCCcCEEEEeCc
Confidence               3467999987753

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.89  E-value=0.13  Score=41.58  Aligned_cols=75  Identities=20%  Similarity=0.208  Sum_probs=57.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +.+||=.||++|.   ++..|++.|++|++++.+++.++.+.+.....  +..+..+..|..+...              
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~~--------------   98 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLSF--------------   98 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCCS--------------
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--cccccccccccccccc--------------
Confidence            3578999999876   66788999999999999998888888777665  3456778888876431              


Q ss_pred             cCCCCCccEEEecccc
Q 017580          143 SDMHSSIQLLINNAGI  158 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~  158 (369)
                        .....|+++++..+
T Consensus        99 --~~~~fD~I~~~~~l  112 (226)
T d1ve3a1          99 --EDKTFDYVIFIDSI  112 (226)
T ss_dssp             --CTTCEEEEEEESCG
T ss_pred             --cCcCceEEEEecch
Confidence              33679999887544

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.88  E-value=0.078  Score=42.03  Aligned_cols=38  Identities=21%  Similarity=0.201  Sum_probs=34.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      .++||++.|.|.+. ||+.+++.+...|++|+..+|++.
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            48899999999865 999999999999999999998754

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.87  E-value=0.064  Score=41.71  Aligned_cols=41  Identities=20%  Similarity=0.188  Sum_probs=36.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLL  100 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~  100 (369)
                      ++.||+++|.|-|.=+|+-++.-|.++|++|+.+......+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            57899999999999999999999999999998887655443

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.87  E-value=0.081  Score=42.34  Aligned_cols=81  Identities=14%  Similarity=0.145  Sum_probs=61.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      .++=+|.|+||..+++.+.+  .+.+|++++++++.++.+.+.+...  +.++.++..++++.+.+   ...    +   
T Consensus        26 ~~lD~t~G~Gghs~~il~~~--~~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~----~---   91 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC--PGCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKT----L---   91 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC--TTCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHH----T---
T ss_pred             EEEEecCCCcHHHHHHHhcC--CCCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHH----c---
Confidence            34447888899999998887  3579999999999988888777553  56799999998775432   222    1   


Q ss_pred             CCCCCccEEEeccccc
Q 017580          144 DMHSSIQLLINNAGIL  159 (369)
Q Consensus       144 ~~~~~id~lv~nAG~~  159 (369)
                       ....+|.++...|+.
T Consensus        92 -~~~~vdgIl~DlGvS  106 (192)
T d1m6ya2          92 -GIEKVDGILMDLGVS  106 (192)
T ss_dssp             -TCSCEEEEEEECSCC
T ss_pred             -CCCCcceeeeccchh
Confidence             347899999999985

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.85  E-value=0.18  Score=37.76  Aligned_cols=76  Identities=18%  Similarity=0.246  Sum_probs=53.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-CCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           65 VCIVTGATSGLGAAAAYALSRE-GFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~-G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      .+.|.|++|-+|+++++...+. +++++.. ++... +..    +...  +..   +..|+|.++...+.++...+    
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~----~~~~--~~D---vvIDFS~p~~~~~~~~~~~~----   66 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSL----LTDG--NTE---VVIDFTHPDVVMGNLEFLID----   66 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THH----HHTT--TCS---EEEECCCTTTHHHHHHHHHH----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhh----hccc--cCC---EEEEcccHHHHHHHHHHHHh----
Confidence            4789999999999999987665 5676643 44322 222    1111  222   56899999999999998877    


Q ss_pred             cCCCCCccEEEecccc
Q 017580          143 SDMHSSIQLLINNAGI  158 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~  158 (369)
                          .++-+++-..|.
T Consensus        67 ----~~~~~ViGTTG~   78 (135)
T d1yl7a1          67 ----NGIHAVVGTTGF   78 (135)
T ss_dssp             ----TTCEEEECCCCC
T ss_pred             ----cCCCEEEecccc
Confidence                456778766664

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.81  E-value=0.1  Score=41.53  Aligned_cols=68  Identities=12%  Similarity=0.007  Sum_probs=47.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHH-------HHHhhcCCCcEEEEEecCCC
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA-------DITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~-------~~~~~~~~~~v~~~~~Dls~  125 (369)
                      ...+++++++.|.|. |.||+++|+.+...|++|+..++..........       .+.+......+..+.+.+++
T Consensus        38 ~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~  112 (188)
T d2naca1          38 HAYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHP  112 (188)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCT
T ss_pred             cceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccc
Confidence            345688999999996 679999999999999999999986433222211       11122224566777777765

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.77  E-value=0.052  Score=42.52  Aligned_cols=42  Identities=19%  Similarity=0.135  Sum_probs=37.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS  101 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~  101 (369)
                      +++||.|+|.|.|.=+|+-+|.-|+++|++|..+......+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            578999999999999999999999999999999887665543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.72  E-value=0.096  Score=38.90  Aligned_cols=73  Identities=16%  Similarity=0.209  Sum_probs=54.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCEEEEE-eCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhcc
Q 017580           65 VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  143 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~G~~Vvl~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~  143 (369)
                      .+.|.|++|-+|+++++.+.++|++++.. +++...          ...+..   +..|+|.++...+.++...+     
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~~D---VvIDFS~p~~~~~~l~~~~~-----   63 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDSPD---VVIDFSSPEALPKTVDLCKK-----   63 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSCCS---EEEECSCGGGHHHHHHHHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------HhccCC---EEEEecCHHHHHHHHHHHHh-----
Confidence            38899999999999999999999987654 544321          011222   46799999999999998877     


Q ss_pred             CCCCCccEEEecccc
Q 017580          144 DMHSSIQLLINNAGI  158 (369)
Q Consensus       144 ~~~~~id~lv~nAG~  158 (369)
                         .++.+++-..|.
T Consensus        64 ---~~~p~ViGTTG~   75 (128)
T d1vm6a3          64 ---YRAGLVLGTTAL   75 (128)
T ss_dssp             ---HTCEEEECCCSC
T ss_pred             ---cCCCEEEEcCCC
Confidence               346678777764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.37  E-value=0.12  Score=42.39  Aligned_cols=79  Identities=8%  Similarity=0.072  Sum_probs=56.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhh----------------cCCCcEEEEEecCCC
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR----------------NKDARLEAFQVDLSS  125 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~----------------~~~~~v~~~~~Dls~  125 (369)
                      .+.+||.-|++.|   ..+..||++|++|+.++-++..++.+.++....                ..+.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            4678999999987   568889999999999999998887777664321                123568888888876


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCccEEEecccc
Q 017580          126 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       126 ~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~  158 (369)
                      ....               ..+..|+++.....
T Consensus       122 l~~~---------------~~~~fd~i~~~~~l  139 (229)
T d2bzga1         122 LPRT---------------NIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGGS---------------CCCCEEEEEESSST
T ss_pred             cccc---------------ccCceeEEEEEEEE
Confidence            4310               33567777655443

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.35  E-value=0.083  Score=43.50  Aligned_cols=46  Identities=20%  Similarity=0.282  Sum_probs=39.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  106 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~  106 (369)
                      +++|++++|-|- |.+|..+|+.|.+.|++|+.++.+...+.....+
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            578999999987 5799999999999999999999988777665554

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.21  E-value=0.25  Score=39.27  Aligned_cols=41  Identities=10%  Similarity=0.009  Sum_probs=35.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   99 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~   99 (369)
                      ..+++|+++.|.|. |.||+++|+.+...|++|+..++....
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            45788999999987 579999999999999999999886553

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.10  E-value=0.11  Score=41.50  Aligned_cols=41  Identities=20%  Similarity=0.217  Sum_probs=35.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      ...+++||++.|.|. |.||+++|+.+..-|++|+..++...
T Consensus        43 ~~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          43 GAARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             CceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            345789999999987 67999999999999999999998754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.08  E-value=0.39  Score=37.98  Aligned_cols=76  Identities=12%  Similarity=0.189  Sum_probs=56.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .+..||=.|++.|-   .+..|+++|++|+.++.++..++.+.+.....+ -..+.+...|+.+..              
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~~d~~~~~--------------   91 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEG-LDNLQTDLVDLNTLT--------------   91 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEECCTTTCC--------------
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-ccchhhhheeccccc--------------
Confidence            45579999997553   567889999999999999988888877665543 245788888887643              


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..+..|+++.+.-.
T Consensus        92 ---~~~~fD~I~~~~~~  105 (198)
T d2i6ga1          92 ---FDGEYDFILSTVVM  105 (198)
T ss_dssp             ---CCCCEEEEEEESCG
T ss_pred             ---ccccccEEEEeeee
Confidence               22568999876643

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.04  E-value=0.54  Score=40.56  Aligned_cols=75  Identities=15%  Similarity=0.256  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      +|++||-.|++.|+   ++..+++.|+ +|++++.++ .++.+.+..++.+...++.++..|+.+.+-            
T Consensus        38 ~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~------------  101 (328)
T d1g6q1_          38 KDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL------------  101 (328)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC------------
T ss_pred             CcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC------------
Confidence            58999999999884   4566788897 788888774 555666666666667789999999876430            


Q ss_pred             hccCCCCCccEEEecc
Q 017580          141 LDSDMHSSIQLLINNA  156 (369)
Q Consensus       141 ~~~~~~~~id~lv~nA  156 (369)
                          .....|+++..-
T Consensus       102 ----~~~~~D~i~se~  113 (328)
T d1g6q1_         102 ----PFPKVDIIISEW  113 (328)
T ss_dssp             ----SSSCEEEEEECC
T ss_pred             ----cccceeEEEEEe
Confidence                235799998754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.01  E-value=0.075  Score=41.12  Aligned_cols=67  Identities=13%  Similarity=0.206  Sum_probs=43.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC-----CCcEEEEEecCCChHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-----DARLEAFQVDLSSFQSVLKFK  133 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~-----~~~v~~~~~Dls~~~~i~~~~  133 (369)
                      |-|.|. |-+|..+|++|++.|++|++.+|++++.+++.+.-.....     -.+..++-+=+.+.+++++++
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            444554 7899999999999999999999999887776542110000     012233444456667777665

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.96  E-value=0.2  Score=40.54  Aligned_cols=80  Identities=16%  Similarity=0.046  Sum_probs=59.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|.+||-.|+++|--.++..++...+.+|+.++.+++.++.+.+.+.... -.++.++..|..+...             
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~~~-------------  140 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYGVP-------------  140 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCCG-------------
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHccc-------------
Confidence            37799999999887776666666667799999999999988888886543 4567777777654210             


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..++.|+++.+++.
T Consensus       141 ---~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         141 ---EFSPYDVIFVTVGV  154 (213)
T ss_dssp             ---GGCCEEEEEECSBB
T ss_pred             ---cccchhhhhhhccH
Confidence               23579999998875

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=92.94  E-value=0.33  Score=40.83  Aligned_cols=78  Identities=15%  Similarity=0.149  Sum_probs=56.7

Q ss_pred             CEEEEeCCCCc-hHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas~g-IG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ++++-.|++|| |+.+++ +  ...++|++++.+++.++-+.+..+..+-..++.+...|+.+...         .    
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~~---------~----  175 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---------E----  175 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---------G----
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccccc---------c----
Confidence            45665666655 555544 3  35689999999999999999888776555678888889875421         1    


Q ss_pred             cCCCCCccEEEeccccc
Q 017580          143 SDMHSSIQLLINNAGIL  159 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~  159 (369)
                        ..+++|++|.|.-+.
T Consensus       176 --~~~~fDlIVsNPPYI  190 (271)
T d1nv8a_         176 --KFASIEMILSNPPYV  190 (271)
T ss_dssp             --GTTTCCEEEECCCCB
T ss_pred             --ccCcccEEEEccccc
Confidence              347899999998765

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.1  Score=40.42  Aligned_cols=39  Identities=26%  Similarity=0.263  Sum_probs=34.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   99 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~   99 (369)
                      .+.||+++|.|-. -||+.+|+.+...|++|+++..++-+
T Consensus        21 ~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccch
Confidence            3679999999875 79999999999999999999998743

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.73  E-value=0.23  Score=35.81  Aligned_cols=34  Identities=18%  Similarity=0.250  Sum_probs=30.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      |.++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            67888887 68999999999999999999988754

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.70  E-value=0.12  Score=40.46  Aligned_cols=40  Identities=23%  Similarity=0.233  Sum_probs=35.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   96 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~   96 (369)
                      ...+++||.++|.|-|.=+|+-+|..|+++|++|..+..+
T Consensus        23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            3457899999999999999999999999999999877654

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.53  E-value=0.38  Score=38.05  Aligned_cols=76  Identities=16%  Similarity=0.141  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhc-CCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .+++|+=.|+++|   .++..+++.+.+|++++.++...+.+.+.++..+ .+.++.++..|+.+.-             
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~-------------  115 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-------------  115 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC-------------
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh-------------
Confidence            4788999998877   4456677788899999999988888887776543 2456899999986521             


Q ss_pred             hccCCCCCccEEEeccc
Q 017580          141 LDSDMHSSIQLLINNAG  157 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG  157 (369)
                          .....|++++|.-
T Consensus       116 ----~~~~fD~Ii~~~p  128 (194)
T d1dusa_         116 ----KDRKYNKIITNPP  128 (194)
T ss_dssp             ----TTSCEEEEEECCC
T ss_pred             ----ccCCceEEEEccc
Confidence                2357999998864

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=92.50  E-value=0.28  Score=39.73  Aligned_cols=76  Identities=14%  Similarity=0.082  Sum_probs=57.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ++.||=.|++.|.-   +..|+++|++|+.++.+++.++.+.+.+...+ ..++.++..|..+..-              
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~l~~--------------   77 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQMPF--------------   77 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-CCCS--------------
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-cccccccccccccccc--------------
Confidence            57899999998843   46788899999999999988887776665543 4578999999876420              


Q ss_pred             cCCCCCccEEEecccc
Q 017580          143 SDMHSSIQLLINNAGI  158 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~  158 (369)
                        ..+..|+++++..+
T Consensus        78 --~~~~fD~v~~~~~l   91 (231)
T d1vl5a_          78 --TDERFHIVTCRIAA   91 (231)
T ss_dssp             --CTTCEEEEEEESCG
T ss_pred             --cccccccccccccc
Confidence              23679999988765

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=92.49  E-value=1.7  Score=33.37  Aligned_cols=79  Identities=22%  Similarity=0.199  Sum_probs=56.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ..+.-.|+|.|+. -.|++.++.....|++|.+.+.+.++++++.+....     .+...   .++.+.+.+.   +.  
T Consensus        29 gv~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-----~~~~~---~~~~~~l~~~---~~--   94 (168)
T d1pjca1          29 GVKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELL---YSNSAEIETA---VA--   94 (168)
T ss_dssp             TBCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEE---ECCHHHHHHH---HH--
T ss_pred             CCCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-----cceee---hhhhhhHHHh---hc--
Confidence            4456789999984 579999999999999999999999988877665522     22322   3444444332   22  


Q ss_pred             HhccCCCCCccEEEecccccc
Q 017580          140 LLDSDMHSSIQLLINNAGILA  160 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~~~  160 (369)
                              .-|++|..+=+.+
T Consensus        95 --------~aDivI~aalipG  107 (168)
T d1pjca1          95 --------EADLLIGAVLVPG  107 (168)
T ss_dssp             --------TCSEEEECCCCTT
T ss_pred             --------cCcEEEEeeecCC
Confidence                    2799999987653

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.48  E-value=2.7  Score=35.71  Aligned_cols=118  Identities=12%  Similarity=0.078  Sum_probs=71.7

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcC-CCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGAT-SGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas-~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      +|+.||=..+. ||++.    ..+..|+ +|+.++.++..++.+.+.++..+- ..++.++..|+.      ++.+...+
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            47888866666 44443    3456787 799999999999998888865543 357889998874      22333333


Q ss_pred             HHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017580          139 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  206 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~IV~vsS  206 (369)
                            ...+.|++|...-...+.    .+.....    ......+.+..++.++.   +|.+++.|.
T Consensus       214 ------~~~~fD~Ii~DPP~f~~~----~~~~~~~----~~~~~~L~~~a~~ll~p---gG~l~~~sc  264 (317)
T d2b78a2         214 ------HHLTYDIIIIDPPSFARN----KKEVFSV----SKDYHKLIRQGLEILSE---NGLIIASTN  264 (317)
T ss_dssp             ------TTCCEEEEEECCCCC---------CCCCH----HHHHHHHHHHHHHTEEE---EEEEEEEEC
T ss_pred             ------hcCCCCEEEEcChhhccc----hhHHHHH----HHHHHHHHHHHHHHcCC---CCEEEEEeC
Confidence                  457899999986533221    1111111    12344566667777654   355555443

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.42  E-value=0.22  Score=40.50  Aligned_cols=79  Identities=16%  Similarity=0.101  Sum_probs=61.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|..||..|+++|--.++.-+++  |.+|+.+.++++-.+.+.+.+.+.+ -.++.++..|..+-..             
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g-~~nv~~~~gd~~~g~~-------------  141 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG-VKNVHVILGDGSKGFP-------------  141 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCCG-------------
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC-CceeEEEECccccCCc-------------
Confidence            36789999999998888887776  5679999999887777777776653 4689999999864210             


Q ss_pred             ccCCCCCccEEEeccccc
Q 017580          142 DSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~~  159 (369)
                         ..++.|.++.++++.
T Consensus       142 ---~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         142 ---PKAPYDVIIVTAGAP  156 (215)
T ss_dssp             ---GGCCEEEEEECSBBS
T ss_pred             ---ccCcceeEEeecccc
Confidence               347899999988874

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.32  E-value=0.059  Score=42.42  Aligned_cols=36  Identities=25%  Similarity=0.365  Sum_probs=32.2

Q ss_pred             CCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH
Q 017580           71 ATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  106 (369)
Q Consensus        71 as~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~  106 (369)
                      |.|-+|..+|++|++.|++|.+.+|++++.+++.++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            567899999999999999999999999988777665

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.23  E-value=0.12  Score=37.90  Aligned_cols=35  Identities=23%  Similarity=0.319  Sum_probs=30.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      ++|.++|.|| |.+|.++|..|++.|.+|.++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            3577888866 6899999999999999999998864

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.10  E-value=0.11  Score=38.22  Aligned_cols=33  Identities=24%  Similarity=0.196  Sum_probs=29.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      |.++|.||+ -||.++|..|++.|.+|.++.|++
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            678888885 699999999999999999999964

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.06  E-value=0.12  Score=40.13  Aligned_cols=41  Identities=20%  Similarity=0.329  Sum_probs=33.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCcchHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMA  105 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~~~~~~~~~  105 (369)
                      |.+.|.|+ |-||..+|+.|.+.|.  +|+..+|+++..+.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            35788876 8999999999999996  78999999877665543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.03  E-value=0.12  Score=37.87  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=30.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      ++.++|.|| |.+|.++|..|+++|.+|.++.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            577888887 68999999999999999999998754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.02  E-value=0.13  Score=37.69  Aligned_cols=34  Identities=29%  Similarity=0.467  Sum_probs=29.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      ++.++|.|| |.+|.++|..|++.|.+|.++.|++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            367888776 6899999999999999999999865

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.94  E-value=0.11  Score=40.10  Aligned_cols=38  Identities=13%  Similarity=0.184  Sum_probs=31.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      |-+. |.|-+|.++|++|+++|++|.+.+|+.++.+.+.
T Consensus         4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            4455 4578999999999999999999999987766554

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.90  E-value=0.39  Score=37.20  Aligned_cols=118  Identities=10%  Similarity=-0.033  Sum_probs=61.9

Q ss_pred             EEEeCC-CCchHHHHHHHHHHCC----CEEEEEeCCcch--HHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHH
Q 017580           66 CIVTGA-TSGLGAAAAYALSREG----FHVVLVGRSSHL--LSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        66 vlITGa-s~gIG~~~a~~La~~G----~~Vvl~~r~~~~--~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      +.|.|| |.|.+..++.-+....    .++++.+.++++  ++..........  .+..+..  ..-+|..+      .+
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~--~~~td~~~------al   75 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI--HLTLDRRR------AL   75 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE--EEESCHHH------HH
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee--eecCCchh------hc
Confidence            556665 5677777766665542    389999998864  333222111111  1222222  22233221      11


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHH--hhhh----------------hhHHHHHHHHHHhHhhhcCCCC
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQ--MMST----------------NYIGAFFLTKLLLPLLKNSPVP  198 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~--~~~v----------------N~~~~~~l~~~~~~~~~~~~~~  198 (369)
                                ..-|++|+.||+...      +++.+  .+..                ...-..-+++.+.+.+.+...+
T Consensus        76 ----------~gaDvVv~ta~~~~~------~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pd  139 (169)
T d1s6ya1          76 ----------DGADFVTTQFRVGGL------EARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPD  139 (169)
T ss_dssp             ----------TTCSEEEECCCTTHH------HHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             ----------CCCCEEEEccccCCC------CCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCC
Confidence                      247999999997521      11111  1111                1234556667777777766546


Q ss_pred             CeEEEEcCC
Q 017580          199 SRIVNVTSF  207 (369)
Q Consensus       199 g~IV~vsS~  207 (369)
                      +-++++|-.
T Consensus       140 a~~i~vtNP  148 (169)
T d1s6ya1         140 AWLINFTNP  148 (169)
T ss_dssp             CEEEECSSS
T ss_pred             eEEEEeCCh
Confidence            788887753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.80  E-value=0.24  Score=36.13  Aligned_cols=33  Identities=21%  Similarity=0.211  Sum_probs=29.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      |.++|.|| |-||.++|..|++.|.+|.++.|++
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            67888887 6799999999999999999998865

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.75  E-value=0.28  Score=39.98  Aligned_cols=82  Identities=11%  Similarity=0.084  Sum_probs=63.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC----CCcEEEEEecCCChHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK----DARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~----~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .|..||-.|+++|--.++.-++.....+|+.++++++.++.+.+.+++...    -.++.+...|..+...         
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~---------  146 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA---------  146 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG---------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccc---------
Confidence            377999999999988888888888888999999999998888888865432    2467777778653210         


Q ss_pred             HHHhccCCCCCccEEEeccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~  159 (369)
                             ...+.|.++.+++..
T Consensus       147 -------~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         147 -------EEAPYDAIHVGAAAP  161 (224)
T ss_dssp             -------GGCCEEEEEECSBBS
T ss_pred             -------hhhhhhhhhhhcchh
Confidence                   236799999998763

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=91.69  E-value=0.36  Score=40.61  Aligned_cols=78  Identities=12%  Similarity=0.054  Sum_probs=58.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.+||=.|++.|.   ++..|+++ |++|+.++-++..++.+.+.....+-..++.++.+|..+..-            
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~------------  131 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC------------  131 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS------------
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc------------
Confidence            36799999998662   44555554 889999999998888888887777666789999999876420            


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                          ..+..|+++.+-..
T Consensus       132 ----~~~sfD~V~~~~~l  145 (282)
T d2o57a1         132 ----EDNSYDFIWSQDAF  145 (282)
T ss_dssp             ----CTTCEEEEEEESCG
T ss_pred             ----cccccchhhccchh
Confidence                23679999876543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=91.62  E-value=0.13  Score=39.31  Aligned_cols=40  Identities=18%  Similarity=0.335  Sum_probs=33.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMAD  106 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~  106 (369)
                      +.+.|+ |-+|.++++.|.+.| .+|++++|++++.+.+.++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            455666 889999999999888 7999999998887766554

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.60  E-value=0.19  Score=39.84  Aligned_cols=41  Identities=10%  Similarity=0.034  Sum_probs=34.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      ...+++++++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus        38 ~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          38 GSFEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             -CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccccceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence            345688999999965 78999999999999999999998643

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=91.52  E-value=0.41  Score=39.25  Aligned_cols=76  Identities=12%  Similarity=0.124  Sum_probs=57.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      |+.||=.|++.|   .++..++++ |++|+.++-++..++.+.+.....+.+.++.++..|+.+..              
T Consensus        34 g~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~--------------   96 (245)
T d1nkva_          34 GTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV--------------   96 (245)
T ss_dssp             TCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC--------------
T ss_pred             CCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc--------------
Confidence            788999998877   345556654 89999999999888888777776666678999999997632              


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..++.|.+++.-.+
T Consensus        97 ---~~~~fD~v~~~~~~  110 (245)
T d1nkva_          97 ---ANEKCDVAACVGAT  110 (245)
T ss_dssp             ---CSSCEEEEEEESCG
T ss_pred             ---ccCceeEEEEEehh
Confidence               23679988866544

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.19  E-value=0.13  Score=39.38  Aligned_cols=37  Identities=14%  Similarity=0.209  Sum_probs=32.0

Q ss_pred             CCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Q 017580           71 ATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  107 (369)
Q Consensus        71 as~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~  107 (369)
                      |.|-+|.++++.|.+.|++|++..|+.++.+++.++.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            5578999999999999999999999988877766554

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=91.19  E-value=0.079  Score=42.29  Aligned_cols=40  Identities=20%  Similarity=0.186  Sum_probs=33.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  104 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~  104 (369)
                      +.+.|.||+ ..|.++|..|++.|.+|.+++|+++..+++.
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            357888885 4899999999999999999999977665543

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=91.17  E-value=0.52  Score=39.06  Aligned_cols=77  Identities=17%  Similarity=0.227  Sum_probs=58.4

Q ss_pred             CCCEEEEeCCCCc-hHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~g-IG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.+||=.|+++| +..++|+.+. .+.+|+.++++++.++.+.+.+++.....++.+...|+.+.-             
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~-~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~-------------  150 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALN-GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-------------  150 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHT-TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-------------
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc-------------
Confidence            3789999999876 4455555543 345999999999999999999887665678999999987631             


Q ss_pred             hccCCCCCccEEEecc
Q 017580          141 LDSDMHSSIQLLINNA  156 (369)
Q Consensus       141 ~~~~~~~~id~lv~nA  156 (369)
                          ....+|.++.+.
T Consensus       151 ----~~~~fD~V~ld~  162 (250)
T d1yb2a1         151 ----SDQMYDAVIADI  162 (250)
T ss_dssp             ----CSCCEEEEEECC
T ss_pred             ----ccceeeeeeecC
Confidence                235689998753

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.16  E-value=0.22  Score=39.18  Aligned_cols=39  Identities=26%  Similarity=0.313  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           59 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        59 ~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      ...++|.|+|.|| |--|.+.|..|+++|++|++..++..
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3456789999998 56799999999999999999998754

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.15  E-value=0.64  Score=35.52  Aligned_cols=83  Identities=16%  Similarity=0.191  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCC---ChHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS---SFQSVLKFKDSLQQ  138 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls---~~~~i~~~~~~i~~  138 (369)
                      +|+.+.|.+.|||.|--++..+.+.|.++.-.  +    +++.+++++..+.....--.+|++   +.+...+.++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~----~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--E----EKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--C----HHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--C----HHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            47889999999999999999999999776422  2    234444544444332223345654   45556666665554


Q ss_pred             HHhccCCCCCccEEEeccc
Q 017580          139 WLLDSDMHSSIQLLINNAG  157 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nAG  157 (369)
                             .+.+|.++....
T Consensus        76 -------d~~vd~v~v~~~   87 (163)
T d2csua3          76 -------DPNVDMLIAICV   87 (163)
T ss_dssp             -------STTCSEEEEEEE
T ss_pred             -------CCCcCEEEEeec
Confidence                   467887765443

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.12  E-value=0.15  Score=37.07  Aligned_cols=34  Identities=12%  Similarity=0.191  Sum_probs=29.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            367888887 6799999999999999999999864

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.08  E-value=0.66  Score=35.80  Aligned_cols=122  Identities=8%  Similarity=0.086  Sum_probs=63.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-----CCEEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGAAAAYALSRE-----GFHVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~-----G~~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      .+.|.||+|.-...++..++.+     +.+|++.+.++++++.....+....  .+........  +|..   +   .  
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~---e---a--   74 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPE---E---A--   74 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHH---H---H--
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChh---h---c--
Confidence            4666677653222233333332     2489999999998875555543311  0122222221  1211   1   1  


Q ss_pred             HHHhccCCCCCccEEEeccccccCCCCCCHHhHHHhhhhhh----------------HHHHHHHHHHhHhhhcCCCCCeE
Q 017580          138 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNY----------------IGAFFLTKLLLPLLKNSPVPSRI  201 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~----------------~~~~~l~~~~~~~~~~~~~~g~I  201 (369)
                              ...-|++|+.||+....    ...-++.+..|+                .-+.-.++.+.+.+++...++-+
T Consensus        75 --------l~~AD~Vvitag~~~~~----g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~l  142 (167)
T d1u8xx1          75 --------FTDVDFVMAHIRVGKYA----MRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWM  142 (167)
T ss_dssp             --------HSSCSEEEECCCTTHHH----HHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             --------cCCCCEEEECCCcCCCC----ceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEE
Confidence                    13589999999975211    111122222231                22345566777777666546788


Q ss_pred             EEEcCCc
Q 017580          202 VNVTSFT  208 (369)
Q Consensus       202 V~vsS~~  208 (369)
                      +++|-..
T Consensus       143 i~~TNPv  149 (167)
T d1u8xx1         143 LNYSNPA  149 (167)
T ss_dssp             EECCSCH
T ss_pred             EEeCCHH
Confidence            8887643

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.92  E-value=1.1  Score=34.82  Aligned_cols=80  Identities=10%  Similarity=0.172  Sum_probs=57.8

Q ss_pred             CCCCEEEEeCCC-CchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           61 IKRPVCIVTGAT-SGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        61 ~~~k~vlITGas-~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      .+|+.+|=..|+ |++|.+    .+++|+ +|+.++.+.+..+.+.+.++..+...++.++..|+.+      +.++...
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~~  109 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFYE  109 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHHH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhcc
Confidence            568888855554 557765    566888 7999999999988888888766555678899988743      3333333


Q ss_pred             HHhccCCCCCccEEEecc
Q 017580          139 WLLDSDMHSSIQLLINNA  156 (369)
Q Consensus       139 ~~~~~~~~~~id~lv~nA  156 (369)
                            ...+.|+++...
T Consensus       110 ------~~~~fDlIflDP  121 (182)
T d2fhpa1         110 ------EKLQFDLVLLDP  121 (182)
T ss_dssp             ------TTCCEEEEEECC
T ss_pred             ------cCCCcceEEech
Confidence                  446799998665

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.74  E-value=0.21  Score=38.07  Aligned_cols=36  Identities=17%  Similarity=0.163  Sum_probs=29.2

Q ss_pred             CCEEEEe-CCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           63 RPVCIVT-GATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        63 ~k~vlIT-Gas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      ++.++|. .+++.||.++|..|+++|++|.++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            3445554 46689999999999999999999998754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.74  E-value=0.39  Score=34.55  Aligned_cols=33  Identities=18%  Similarity=0.128  Sum_probs=28.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      |.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56777776 6899999999999999999999865

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=90.57  E-value=0.39  Score=39.12  Aligned_cols=75  Identities=11%  Similarity=-0.044  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      .|.+||-.|+++|--.   ..|++.+.+|+.+.++++..+.+.+.+..   ..++.++..|...--.             
T Consensus        70 ~g~~VLdIG~GsGy~t---a~La~l~~~V~aiE~~~~~~~~A~~~~~~---~~nv~~~~~d~~~g~~-------------  130 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYT---ALIAEIVDKVVSVEINEKMYNYASKLLSY---YNNIKLILGDGTLGYE-------------  130 (224)
T ss_dssp             TTCEEEEECCTTSHHH---HHHHHHSSEEEEEESCHHHHHHHHHHHTT---CSSEEEEESCGGGCCG-------------
T ss_pred             ccceEEEecCCCCHHH---HHHHHHhcccccccccHHHHHHHHHHHhc---ccccccccCchhhcch-------------
Confidence            3778999999988543   34666678999999998887777665432   3578888888754110             


Q ss_pred             ccCCCCCccEEEecccc
Q 017580          142 DSDMHSSIQLLINNAGI  158 (369)
Q Consensus       142 ~~~~~~~id~lv~nAG~  158 (369)
                         ..++.|.++.++++
T Consensus       131 ---~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         131 ---EEKPYDRVVVWATA  144 (224)
T ss_dssp             ---GGCCEEEEEESSBB
T ss_pred             ---hhhhHHHHHhhcch
Confidence               23679999988875

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.54  E-value=0.42  Score=37.09  Aligned_cols=78  Identities=18%  Similarity=0.236  Sum_probs=49.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +|+.+|=.|+++|.   ++.+.+++|++|+.++.++...+.+.+.++..+-+.++....+|.        +......   
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~--------~~~~~~~---  106 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEV--------FLPEAKA---  106 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHH--------HHHHHHH---
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhc--------ccccccc---
Confidence            46777766666542   334566789999999999999998888887654444433322221        1222222   


Q ss_pred             ccCCCCCccEEEecc
Q 017580          142 DSDMHSSIQLLINNA  156 (369)
Q Consensus       142 ~~~~~~~id~lv~nA  156 (369)
                         ...+.|+++.+.
T Consensus       107 ---~~~~fD~If~DP  118 (171)
T d1ws6a1         107 ---QGERFTVAFMAP  118 (171)
T ss_dssp             ---TTCCEEEEEECC
T ss_pred             ---cCCccceeEEcc
Confidence               446799998875

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.42  E-value=0.13  Score=41.38  Aligned_cols=40  Identities=15%  Similarity=0.107  Sum_probs=34.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           58 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        58 ~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      ..++.||++.|.|. |.||+++|+.+..-|++|+..++...
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            34688999999998 56999999999999999999998654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.26  E-value=0.57  Score=39.03  Aligned_cols=73  Identities=14%  Similarity=0.167  Sum_probs=55.0

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGAT-SGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        62 ~~k~vlITGas-~gIG~~~a~~La~~G-~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      .|++|+-.||+ |+++..+|    ++| ++|+.++.|+...+.+.+.++..+-..+++++..|..+..            
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~------------  170 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP------------  170 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC------------
T ss_pred             CccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc------------
Confidence            48899999987 45555554    345 5999999999999888888877655668999999987532            


Q ss_pred             HhccCCCCCccEEEec
Q 017580          140 LLDSDMHSSIQLLINN  155 (369)
Q Consensus       140 ~~~~~~~~~id~lv~n  155 (369)
                           ..+..|.+|.|
T Consensus       171 -----~~~~~D~Ii~~  181 (260)
T d2frna1         171 -----GENIADRILMG  181 (260)
T ss_dssp             -----CCSCEEEEEEC
T ss_pred             -----cCCCCCEEEEC
Confidence                 23568888765

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.10  E-value=0.5  Score=38.96  Aligned_cols=79  Identities=9%  Similarity=0.093  Sum_probs=59.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      ++++||=.|++.|   ..+..+++.|. +|++++.+++.++.+.+.........++.++..|.....-            
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~------------   88 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM------------   88 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC------------
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc------------
Confidence            3688999999876   24566777775 8999999999999988877766556689999999864320            


Q ss_pred             hccCCCCCccEEEecccc
Q 017580          141 LDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG~  158 (369)
                         ...+..|+++++-++
T Consensus        89 ---~~~~~fD~V~~~~~l  103 (252)
T d1ri5a_          89 ---DLGKEFDVISSQFSF  103 (252)
T ss_dssp             ---CCSSCEEEEEEESCG
T ss_pred             ---cccccceEEEEccee
Confidence               023579999877654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.06  E-value=0.21  Score=36.55  Aligned_cols=32  Identities=31%  Similarity=0.294  Sum_probs=27.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCC
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   96 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~   96 (369)
                      +.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45777777 689999999999999999999876

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=89.80  E-value=0.56  Score=36.34  Aligned_cols=125  Identities=10%  Similarity=-0.000  Sum_probs=65.3

Q ss_pred             EEEEeCCCCchHH--HHHHHHHHC----CCEEEEEeCCcchHHHHHHHHHhhc--CCCcEEEEEecCCChHHHHHHHHHH
Q 017580           65 VCIVTGATSGLGA--AAAYALSRE----GFHVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSL  136 (369)
Q Consensus        65 ~vlITGas~gIG~--~~a~~La~~----G~~Vvl~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~i~~~~~~i  136 (369)
                      .+.|.|| |.+|.  ++...++..    +.++++.++++++++.....+....  .+....+...  +|.++   .    
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~~e---a----   73 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLDD---V----   73 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHHH---H----
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CChhh---c----
Confidence            4667776 44554  444455543    4599999999998876655554321  1223333332  22221   1    


Q ss_pred             HHHHhccCCCCCccEEEeccccccCCCCCCHHhHHHh---------hhhh---------hHHHHHHHHHHhHhhhcCCCC
Q 017580          137 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM---------MSTN---------YIGAFFLTKLLLPLLKNSPVP  198 (369)
Q Consensus       137 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~---------~~vN---------~~~~~~l~~~~~~~~~~~~~~  198 (369)
                               ....|++|+.+++.........+.+...         -+.+         ..-+.-+++.+.+.+++...+
T Consensus        74 ---------L~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~  144 (171)
T d1obba1          74 ---------IIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPK  144 (171)
T ss_dssp             ---------HTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTT
T ss_pred             ---------ccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcC
Confidence                     1348999999886421000000000000         0001         233566777777777765546


Q ss_pred             CeEEEEcCCc
Q 017580          199 SRIVNVTSFT  208 (369)
Q Consensus       199 g~IV~vsS~~  208 (369)
                      +.++++|-..
T Consensus       145 a~~i~~TNPv  154 (171)
T d1obba1         145 AWYLQAANPI  154 (171)
T ss_dssp             CEEEECSSCH
T ss_pred             eEEEEECChH
Confidence            7888888644

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=89.69  E-value=0.31  Score=35.23  Aligned_cols=36  Identities=17%  Similarity=0.229  Sum_probs=31.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      .+|.++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            3678888887 68999999999999999999998653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=89.59  E-value=0.49  Score=38.20  Aligned_cols=63  Identities=11%  Similarity=0.193  Sum_probs=49.5

Q ss_pred             CCEEEEeCCCCch-HHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           63 RPVCIVTGATSGL-GAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        63 ~k~vlITGas~gI-G~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      +.+||=.|++.|- ...+++.+...|++|++++.+++-++.+.+.+.+......++....|..+
T Consensus        40 ~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~  103 (225)
T d1im8a_          40 DSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRH  103 (225)
T ss_dssp             TCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTT
T ss_pred             CCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhc
Confidence            5689999998654 45566655567899999999999999998888776666778888878765

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=89.41  E-value=0.22  Score=40.72  Aligned_cols=34  Identities=26%  Similarity=0.520  Sum_probs=29.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      .|.|+|.|| |-.|..+|.+|+++|++|.++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            457889988 5689999999999999999999864

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.38  E-value=0.2  Score=40.19  Aligned_cols=37  Identities=27%  Similarity=0.203  Sum_probs=30.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      +.|. |.|-+|..+|..|+++|++|++.+.|+++.+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            4444 568899999999999999999999997765544

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.32  E-value=0.29  Score=35.49  Aligned_cols=34  Identities=21%  Similarity=0.160  Sum_probs=29.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      .+.++|.|| |-||.++|..|++.|.+|.++.|..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            367888887 6899999999999999999998764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.98  E-value=0.2  Score=41.81  Aligned_cols=34  Identities=18%  Similarity=0.185  Sum_probs=30.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG   94 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~   94 (369)
                      +++|++++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            57899999999 58899999999999999998775

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=88.97  E-value=0.77  Score=37.15  Aligned_cols=76  Identities=13%  Similarity=0.083  Sum_probs=57.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      |.+||=.|++.|.   ++..|+++|.+|+.++.++..++.+.+.++..+ -.++.++..|..+..            +  
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-~~~~~~~~~d~~~~~------------~--   78 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG-VENVRFQQGTAESLP------------F--   78 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-CCSEEEEECBTTBCC------------S--
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-ccccccccccccccc------------c--
Confidence            7789999999884   456778889999999999988888877776654 246889999987632            0  


Q ss_pred             cCCCCCccEEEecccc
Q 017580          143 SDMHSSIQLLINNAGI  158 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~  158 (369)
                        ..+.+|+++++-.+
T Consensus        79 --~~~~fD~v~~~~~l   92 (234)
T d1xxla_          79 --PDDSFDIITCRYAA   92 (234)
T ss_dssp             --CTTCEEEEEEESCG
T ss_pred             --cccccceeeeecee
Confidence              23679988876544

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=88.96  E-value=0.87  Score=32.45  Aligned_cols=63  Identities=14%  Similarity=0.204  Sum_probs=48.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  135 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~  135 (369)
                      .+.++.|.|| |-+|+-++....+.|+++++.+.+++.-..          ...-..+..|+.|.+.+.++...
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~   72 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVEL   72 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHh
Confidence            4567999995 569999999999999999999987642110          11225778899999988887764

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.88  E-value=0.14  Score=47.78  Aligned_cols=59  Identities=12%  Similarity=0.142  Sum_probs=44.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeC-------------------CcchHHHHHHHHHhhcCCCcEEEEE
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGR-------------------SSHLLSETMADITSRNKDARLEAFQ  120 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~~  120 (369)
                      +++..|+|.|+ ||+|.++++.|+..|. ++++++.                   ...+.+.+.+.+.+.+|..++..+.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~  101 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVE  101 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEES
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEc
Confidence            34578999997 7899999999999997 8888764                   1346667777777776665555443

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.81  E-value=0.26  Score=35.42  Aligned_cols=33  Identities=21%  Similarity=0.273  Sum_probs=28.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           64 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      +.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            56777766 7899999999999999999998864

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=88.65  E-value=0.12  Score=41.42  Aligned_cols=31  Identities=23%  Similarity=0.265  Sum_probs=28.0

Q ss_pred             CEEEEeCCCCchHH-----HHHHHHHHCCCEEEEEe
Q 017580           64 PVCIVTGATSGLGA-----AAAYALSREGFHVVLVG   94 (369)
Q Consensus        64 k~vlITGas~gIG~-----~~a~~La~~G~~Vvl~~   94 (369)
                      |.+.|||.++|+|+     .+|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            67999999999998     67899999999999886

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=88.46  E-value=0.52  Score=39.64  Aligned_cols=76  Identities=13%  Similarity=0.121  Sum_probs=55.7

Q ss_pred             CEEEEeCCC-CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           64 PVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        64 k~vlITGas-~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ..++=.|++ |-||.+++.++  ...+|++++.++..++.+.+.++..+- .++.+++.|+.+.-               
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~-~~v~~~~~d~~~~~---------------  171 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSAL---------------  171 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCSTTGGG---------------
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCc-ccceeeeccccccc---------------
Confidence            356666665 55677776654  357999999999999988888866542 46999999986532               


Q ss_pred             cCCCCCccEEEeccccc
Q 017580          143 SDMHSSIQLLINNAGIL  159 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~  159 (369)
                        ...++|++|.|.-+.
T Consensus       172 --~~~~fDlIvsNPPYi  186 (274)
T d2b3ta1         172 --AGQQFAMIVSNPPYI  186 (274)
T ss_dssp             --TTCCEEEEEECCCCB
T ss_pred             --CCCceeEEEecchhh
Confidence              235799999998654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.38  E-value=0.33  Score=36.73  Aligned_cols=37  Identities=14%  Similarity=0.004  Sum_probs=29.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET  103 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~  103 (369)
                      +-|. |.|-+|.++|+.|+++|++|+..+++.++....
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            3344 458999999999999999999998887655443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.03  E-value=0.37  Score=35.69  Aligned_cols=35  Identities=20%  Similarity=0.320  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      ++.++|.|| |-+|.++|..|++.|.+|.++.+.+.
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            577888876 78999999999999999999988643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=87.99  E-value=0.25  Score=41.24  Aligned_cols=34  Identities=32%  Similarity=0.371  Sum_probs=28.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      +|.|+|.||+ -=|...|.+|++.|++|+++.++.
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5778888885 458899999999999999998754

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=87.92  E-value=0.46  Score=38.39  Aligned_cols=70  Identities=10%  Similarity=0.075  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHh
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  141 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~  141 (369)
                      +++.||=.|++.|.   +++.|+++|.+|++++.+++.++.+.+..     ..++.++..|+.+..              
T Consensus        20 ~~~~VLDiGcG~G~---~~~~l~~~g~~v~giD~s~~~i~~a~~~~-----~~~~~~~~~~~~~~~--------------   77 (225)
T d2p7ia1          20 RPGNLLELGSFKGD---FTSRLQEHFNDITCVEASEEAISHAQGRL-----KDGITYIHSRFEDAQ--------------   77 (225)
T ss_dssp             CSSCEEEESCTTSH---HHHHHTTTCSCEEEEESCHHHHHHHHHHS-----CSCEEEEESCGGGCC--------------
T ss_pred             CCCcEEEEeCCCcH---HHHHHHHcCCeEEEEeCcHHHhhhhhccc-----ccccccccccccccc--------------
Confidence            46779999988763   45678889999999999987776665442     346788888876532              


Q ss_pred             ccCCCCCccEEEecc
Q 017580          142 DSDMHSSIQLLINNA  156 (369)
Q Consensus       142 ~~~~~~~id~lv~nA  156 (369)
                         ..+..|++++..
T Consensus        78 ---~~~~fD~I~~~~   89 (225)
T d2p7ia1          78 ---LPRRYDNIVLTH   89 (225)
T ss_dssp             ---CSSCEEEEEEES
T ss_pred             ---cccccccccccc
Confidence               235799888653

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=87.73  E-value=2.4  Score=30.14  Aligned_cols=82  Identities=5%  Similarity=0.196  Sum_probs=54.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      ||+|||.=-+.-+-..+...|-+.|++|+..+.+..   ++.+.+++.  ...+.+.-.++.+.+. -++++++++    
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~---~al~~~~~~--~~dliilD~~mp~~~G-~e~~~~ir~----   70 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGR---EAVEKYKEL--KPDIVTMDITMPEMNG-IDAIKEIMK----   70 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHH--CCSEEEEECSCGGGCH-HHHHHHHHH----
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHH---HHHHHHHhc--cCCEEEEecCCCCCCH-HHHHHHHHH----
Confidence            688999999999999999999999999987766543   334444444  3455555555555543 456777766    


Q ss_pred             cCCCCCccEEEecc
Q 017580          143 SDMHSSIQLLINNA  156 (369)
Q Consensus       143 ~~~~~~id~lv~nA  156 (369)
                        ....+-+++..+
T Consensus        71 --~~~~~pvi~ls~   82 (118)
T d1u0sy_          71 --IDPNAKIIVCSA   82 (118)
T ss_dssp             --HCTTCCEEEEEC
T ss_pred             --hCCCCcEEEEEc
Confidence              334566666543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.73  E-value=0.22  Score=39.01  Aligned_cols=35  Identities=17%  Similarity=0.270  Sum_probs=29.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCcc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH   98 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~~   98 (369)
                      +|.|+|.|| |-.|...|..|+++|+ .|+++.|+..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            567888887 5789999999999999 4989888654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.68  E-value=0.29  Score=35.76  Aligned_cols=35  Identities=26%  Similarity=0.259  Sum_probs=30.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      .+.++|.|| |-||.++|..|++.|.+|.++.|++.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            367888887 68999999999999999999988653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.64  E-value=0.31  Score=40.26  Aligned_cols=34  Identities=29%  Similarity=0.487  Sum_probs=30.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG   94 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~   94 (369)
                      +++|++|+|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            47899999998 67899999999999999998766

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.59  E-value=0.36  Score=40.91  Aligned_cols=34  Identities=29%  Similarity=0.364  Sum_probs=31.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEe
Q 017580           60 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG   94 (369)
Q Consensus        60 ~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~   94 (369)
                      +++|++|+|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            578999999998 6899999999999999998876

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.52  E-value=0.24  Score=40.17  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=31.0

Q ss_pred             CCEEEEeCCCCchHH-----HHHHHHHHCCCEEEEEeCCc
Q 017580           63 RPVCIVTGATSGLGA-----AAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        63 ~k~vlITGas~gIG~-----~~a~~La~~G~~Vvl~~r~~   97 (369)
                      ||++.|+|+-||.|+     .+|..|+++|.+|.+++-|.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999999999998     57889999999999998764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.50  E-value=0.58  Score=34.15  Aligned_cols=34  Identities=15%  Similarity=0.131  Sum_probs=29.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      .+.++|.|| |-||.++|..|++.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            467888887 6899999999999999999997754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.29  E-value=0.25  Score=41.38  Aligned_cols=37  Identities=24%  Similarity=0.313  Sum_probs=32.0

Q ss_pred             CCCEEEEeCCCCchHHHH-----HHHHHHCCCEEEEEeCCcc
Q 017580           62 KRPVCIVTGATSGLGAAA-----AYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~-----a~~La~~G~~Vvl~~r~~~   98 (369)
                      .|+.++|+.|-||+|+-+     |..|+++|.+|.+++-+++
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            367788888899999965     7999999999999999975

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=87.23  E-value=0.5  Score=36.24  Aligned_cols=38  Identities=16%  Similarity=0.264  Sum_probs=34.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcch
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   99 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~   99 (369)
                      +.||+++|.|= |-+|+.+|+++...|++|+++..++-+
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            67999999987 569999999999999999999998743

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.83  E-value=1.1  Score=37.54  Aligned_cols=61  Identities=8%  Similarity=0.020  Sum_probs=47.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~-G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      .|.+||=.|++.|   .++..++++ |++|+.++.+++..+.+.+.+++.+....+.....|..+
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~  113 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED  113 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhh
Confidence            3789999999966   345556655 899999999999999888888877656677777777543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.56  E-value=0.44  Score=37.26  Aligned_cols=41  Identities=24%  Similarity=0.379  Sum_probs=31.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHh
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  109 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~  109 (369)
                      |.|.|| |..|.++|..|++.|.+|.+++|+.+.  +..+.+.+
T Consensus         3 I~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           3 VSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            567776 679999999999999999999996542  34455544

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=86.29  E-value=0.29  Score=40.63  Aligned_cols=31  Identities=29%  Similarity=0.477  Sum_probs=27.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      |+|.|| |-.|..+|.+|+++|.+|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            777776 6789999999999999999999875

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.04  E-value=3  Score=30.71  Aligned_cols=86  Identities=8%  Similarity=0.091  Sum_probs=53.1

Q ss_pred             CCEEEEeCCC---CchHHHHHHHHHHCCCEEEEEeCCcchHHH--HHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHH
Q 017580           63 RPVCIVTGAT---SGLGAAAAYALSREGFHVVLVGRSSHLLSE--TMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  137 (369)
Q Consensus        63 ~k~vlITGas---~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~  137 (369)
                      -|.+.|.|||   +..|..+++.|.+.|++|+.+..+.+....  ....+.+.  ...+..+.+ +...+.+.++++++.
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dl--p~~iD~v~i-~vp~~~~~~~~~e~~   95 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDI--PDKIEVVDL-FVKPKLTMEYVEQAI   95 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGC--SSCCSEEEE-CSCHHHHHHHHHHHH
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCccccccccc--CccceEEEE-EeCHHHHHHHHHHHH
Confidence            5789999999   679999999999999999998754322110  01111111  111111111 235667777777776


Q ss_pred             HHHhccCCCCCccEEEeccccc
Q 017580          138 QWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       138 ~~~~~~~~~~~id~lv~nAG~~  159 (369)
                      +        .++..++...|..
T Consensus        96 ~--------~g~k~v~~~~G~~  109 (139)
T d2d59a1          96 K--------KGAKVVWFQYNTY  109 (139)
T ss_dssp             H--------HTCSEEEECTTCC
T ss_pred             H--------hCCCEEEEecccc
Confidence            5        2366777777754

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.86  E-value=0.24  Score=35.16  Aligned_cols=41  Identities=10%  Similarity=-0.010  Sum_probs=33.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           57 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        57 ~~~~~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      ...+++||.|+|.|++ -=|..+|..|+..+.+++...|...
T Consensus        26 ~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          26 EPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             chhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            3456889999999987 4588999999999888877776543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.59  E-value=0.99  Score=36.54  Aligned_cols=82  Identities=15%  Similarity=0.141  Sum_probs=59.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-CC----CEEEEEeCCcchHHHHHHHHHhh----cCCCcEEEEEecCCChHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSR-EG----FHVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKF  132 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~-~G----~~Vvl~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~i~~~  132 (369)
                      .|..||..|+++|--.++.-+++. .|    .+|+.+.++++-.+.+.+.+...    ..-.++.++..|..+-..    
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~----  155 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP----  155 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccc----
Confidence            378999999999988888777764 34    48999999988777776665432    113478888888764210    


Q ss_pred             HHHHHHHHhccCCCCCccEEEeccccc
Q 017580          133 KDSLQQWLLDSDMHSSIQLLINNAGIL  159 (369)
Q Consensus       133 ~~~i~~~~~~~~~~~~id~lv~nAG~~  159 (369)
                                  ..++.|.++.++++.
T Consensus       156 ------------~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         156 ------------PNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ------------GGCSEEEEEECSCBS
T ss_pred             ------------cccceeeEEEEeech
Confidence                        246899999988863

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.17  E-value=0.3  Score=39.49  Aligned_cols=35  Identities=23%  Similarity=0.314  Sum_probs=30.4

Q ss_pred             CEEEEeCCCCchHH-----HHHHHHHHCCCEEEEEeCCcc
Q 017580           64 PVCIVTGATSGLGA-----AAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        64 k~vlITGas~gIG~-----~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      |++.|+++-||.|+     .+|..|+++|.+|.+++-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            68999999999998     567889999999999987753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.10  E-value=0.74  Score=37.29  Aligned_cols=37  Identities=24%  Similarity=0.383  Sum_probs=31.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           61 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        61 ~~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      -.+|.|+|.||+ --|...|..|+++|++|+++.++..
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence            357899999985 5689999999999999999987654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=84.75  E-value=3.8  Score=30.67  Aligned_cols=44  Identities=16%  Similarity=0.279  Sum_probs=31.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC--CEEEEEe--CCcchHHHHHHHH
Q 017580           64 PVCIVTGATSGLGAAAAYALSREG--FHVVLVG--RSSHLLSETMADI  107 (369)
Q Consensus        64 k~vlITGas~gIG~~~a~~La~~G--~~Vvl~~--r~~~~~~~~~~~~  107 (369)
                      |.+.|-|+||.||.....-+.+..  ++|++.+  +|.+.+.+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            579999999999999999888763  6776654  4444444444443

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.59  E-value=0.58  Score=33.59  Aligned_cols=34  Identities=15%  Similarity=0.083  Sum_probs=26.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH---CCCEEEEEeCCc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSS   97 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~---~G~~Vvl~~r~~   97 (369)
                      .+.++|.|| |.+|.++|..|.+   +|.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            367889988 8899999966554   456899998754

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.33  E-value=1.1  Score=37.67  Aligned_cols=61  Identities=10%  Similarity=-0.033  Sum_probs=48.3

Q ss_pred             CCCEEEEeCCCCc-hHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCC
Q 017580           62 KRPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS  125 (369)
Q Consensus        62 ~~k~vlITGas~g-IG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~  125 (369)
                      .|.+||=.|++-| ....+|++   .|++|+.+..+++..+.+.+.+.+.+...++.+...|..+
T Consensus        62 ~G~~VLDiGCG~G~~a~~~a~~---~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~  123 (285)
T d1kpga_          62 PGMTLLDVGCGWGATMMRAVEK---YDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ  123 (285)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG
T ss_pred             CCCEEEEecCcchHHHHHHHhc---CCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhc
Confidence            4789999999854 44445543   4899999999999998888888877767788888888754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.32  E-value=0.58  Score=35.67  Aligned_cols=35  Identities=23%  Similarity=0.209  Sum_probs=29.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC--EEEEEeCCc
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSS   97 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~--~Vvl~~r~~   97 (369)
                      .||.|+|.||+ -.|.++|..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            37899999985 579999999999884  788888765

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=84.03  E-value=2.1  Score=33.30  Aligned_cols=44  Identities=16%  Similarity=0.058  Sum_probs=36.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  106 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~  106 (369)
                      ..-.|+|.|| |-.|.+.++-....|++|.+.+.+.++++++.+.
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            3457888888 4589999999999999999999999888776543

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=83.74  E-value=1.3  Score=37.11  Aligned_cols=74  Identities=16%  Similarity=0.120  Sum_probs=54.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH---CCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHH
Q 017580           63 RPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  139 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~---~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~  139 (369)
                      ..+||=.|++.|   .++..|++   .|.+|+.++.++..++.+.+.+...  +.++.+...|+.+.+            
T Consensus        28 ~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~--~~~~~f~~~d~~~~~------------   90 (281)
T d2gh1a1          28 PVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL--PYDSEFLEGDATEIE------------   90 (281)
T ss_dssp             CCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSS--SSEEEEEESCTTTCC------------
T ss_pred             cCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccc--ccccccccccccccc------------
Confidence            467998998876   33344444   5789999999999888888777654  447888899987643            


Q ss_pred             HhccCCCCCccEEEecccc
Q 017580          140 LLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       140 ~~~~~~~~~id~lv~nAG~  158 (369)
                           ..+..|+++++...
T Consensus        91 -----~~~~fD~v~~~~~l  104 (281)
T d2gh1a1          91 -----LNDKYDIAICHAFL  104 (281)
T ss_dssp             -----CSSCEEEEEEESCG
T ss_pred             -----ccCCceEEEEehhh
Confidence                 12469999887654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=83.62  E-value=0.76  Score=37.47  Aligned_cols=35  Identities=29%  Similarity=0.289  Sum_probs=29.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      .+.|+|.||+ --|..+|..|+++|.+|+++.|+++
T Consensus         4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4678999985 5688888999999999999998653

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.04  E-value=4  Score=30.79  Aligned_cols=42  Identities=12%  Similarity=-0.043  Sum_probs=26.0

Q ss_pred             EEEeCCCCchHHHHHHH-HHH-C----CCEEEEEeCCcchHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYA-LSR-E----GFHVVLVGRSSHLLSETMADIT  108 (369)
Q Consensus        66 vlITGas~gIG~~~a~~-La~-~----G~~Vvl~~r~~~~~~~~~~~~~  108 (369)
                      +.|.||+| +|...+.. ++. .    +.+|++.+.++++++...+...
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~   50 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVK   50 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHH
Confidence            66778754 55544432 222 1    3589999999998876544433

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=82.80  E-value=1.3  Score=33.81  Aligned_cols=83  Identities=16%  Similarity=0.213  Sum_probs=53.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-CCEEEEE-eCCcch-HHHHHHH--------------HHhhcCCCcEEEEEecCCChH
Q 017580           65 VCIVTGATSGLGAAAAYALSRE-GFHVVLV-GRSSHL-LSETMAD--------------ITSRNKDARLEAFQVDLSSFQ  127 (369)
Q Consensus        65 ~vlITGas~gIG~~~a~~La~~-G~~Vvl~-~r~~~~-~~~~~~~--------------~~~~~~~~~v~~~~~Dls~~~  127 (369)
                      .+.|.|++|-+|+++++...+. +++|+.. +|.... ..+-..+              +.......   =+..|+|.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~---DViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF---DVFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC---SEEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhccc---ceEEEeccHH
Confidence            5899999999999999998886 5676543 443211 0000000              00000011   1558999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCccEEEecccc
Q 017580          128 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus       128 ~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~  158 (369)
                      ...+.++...+        .++.+++-..|.
T Consensus        83 ~~~~~~~~a~~--------~~~~~ViGTTG~  105 (162)
T d1diha1          83 GTLNHLAFCRQ--------HGKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHH--------TTCEEEECCCCC
T ss_pred             HHHHHHHHHHh--------ccceeEEecCCC
Confidence            99999988776        467888877774

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=82.58  E-value=0.79  Score=38.97  Aligned_cols=32  Identities=28%  Similarity=0.439  Sum_probs=23.7

Q ss_pred             CEEEEeCCCCchHH-----HHHHHHHHCCCEEEEEeCC
Q 017580           64 PVCIVTGATSGLGA-----AAAYALSREGFHVVLVGRS   96 (369)
Q Consensus        64 k~vlITGas~gIG~-----~~a~~La~~G~~Vvl~~r~   96 (369)
                      |.|+|++|++| |.     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45666665555 65     6889999999999877654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=82.56  E-value=0.58  Score=39.43  Aligned_cols=35  Identities=29%  Similarity=0.436  Sum_probs=29.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           62 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        62 ~~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      +.|.|+|.||+ --|...|.+|+++|++|+++.++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35789999986 458999999999999999998764

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.05  E-value=1.7  Score=36.38  Aligned_cols=45  Identities=22%  Similarity=0.307  Sum_probs=37.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhh
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR  110 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~  110 (369)
                      +++||=.|++.|.   ++..|+++|++|+.++.+++.++.+.+.....
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~  101 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNR  101 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhc
Confidence            5789999999875   46777889999999999999888887776554

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=82.03  E-value=2.4  Score=31.75  Aligned_cols=71  Identities=15%  Similarity=0.107  Sum_probs=44.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcC----CCcEEEEEecCCChHHHHHHHHHHHH
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK----DARLEAFQVDLSSFQSVLKFKDSLQQ  138 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~----~~~v~~~~~Dls~~~~i~~~~~~i~~  138 (369)
                      |-+.|- |-+|..+|++|++.|+.+ ...|+.++..+..++......    -.....+...+.+.+.+....+.+..
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~   77 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYP   77 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTT
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccc
Confidence            445565 789999999999888755 578888777666665422100    01233344455666777766666554

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.88  E-value=2.8  Score=35.22  Aligned_cols=74  Identities=9%  Similarity=0.024  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHH
Q 017580           62 KRPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  140 (369)
Q Consensus        62 ~~k~vlITGas-~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~  140 (369)
                      .|.+||=.|++ ||+...+|+   +.|++|+.++.+++..+.+.+.+...+...++.+...|...               
T Consensus        61 ~G~~VLDiGCG~G~~~~~~a~---~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~~---------------  122 (291)
T d1kpia_          61 PGMTLLDIGCGWGSTMRHAVA---EYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE---------------  122 (291)
T ss_dssp             TTCEEEEETCTTSHHHHHHHH---HHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGGG---------------
T ss_pred             CCCEEEEecCcchHHHHHHHH---hcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcccc---------------
Confidence            47899999998 444333333   34899999999999888888888777666677777776532               


Q ss_pred             hccCCCCCccEEEeccc
Q 017580          141 LDSDMHSSIQLLINNAG  157 (369)
Q Consensus       141 ~~~~~~~~id~lv~nAG  157 (369)
                          ..++.|.+++.-.
T Consensus       123 ----~~~~fD~i~sie~  135 (291)
T d1kpia_         123 ----FDEPVDRIVSLGA  135 (291)
T ss_dssp             ----CCCCCSEEEEESC
T ss_pred             ----cccccceEeechh
Confidence                2367888876544

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=81.85  E-value=0.39  Score=39.96  Aligned_cols=34  Identities=21%  Similarity=0.378  Sum_probs=28.7

Q ss_pred             CEEEEeCCCCchHH-----HHHHHHHHCCCEEEEEeCCcc
Q 017580           64 PVCIVTGATSGLGA-----AAAYALSREGFHVVLVGRSSH   98 (369)
Q Consensus        64 k~vlITGas~gIG~-----~~a~~La~~G~~Vvl~~r~~~   98 (369)
                      |++.|+| -||+|+     .+|..|+++|.+|.+++.+++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            4677898 899998     456799999999999999864

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=81.48  E-value=0.61  Score=38.69  Aligned_cols=31  Identities=39%  Similarity=0.667  Sum_probs=26.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCEEEEEeCCc
Q 017580           66 CIVTGATSGLGAAAAYALSREGFHVVLVGRSS   97 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~   97 (369)
                      |+|.|| |-.|..+|.+|+++|.+|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 5679999999999999999998854

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=81.47  E-value=2.3  Score=33.98  Aligned_cols=71  Identities=17%  Similarity=0.258  Sum_probs=48.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhc
Q 017580           63 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  142 (369)
Q Consensus        63 ~k~vlITGas~gIG~~~a~~La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~  142 (369)
                      +++||=.|++.|.   .+..|++.|++|++++.+++.++.+.+.    ...   ..+..|..+..            +  
T Consensus        43 ~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~l~~a~~~----~~~---~~~~~~~~~l~------------~--   98 (246)
T d2avna1          43 PCRVLDLGGGTGK---WSLFLQERGFEVVLVDPSKEMLEVAREK----GVK---NVVEAKAEDLP------------F--   98 (246)
T ss_dssp             CCEEEEETCTTCH---HHHHHHTTTCEEEEEESCHHHHHHHHHH----TCS---CEEECCTTSCC------------S--
T ss_pred             CCEEEEECCCCch---hcccccccceEEEEeecccccccccccc----ccc---ccccccccccc------------c--
Confidence            5679999998774   4567788999999999998776655433    211   24566766532            0  


Q ss_pred             cCCCCCccEEEeccccc
Q 017580          143 SDMHSSIQLLINNAGIL  159 (369)
Q Consensus       143 ~~~~~~id~lv~nAG~~  159 (369)
                        ..+..|++++...+.
T Consensus        99 --~~~~fD~ii~~~~~~  113 (246)
T d2avna1          99 --PSGAFEAVLALGDVL  113 (246)
T ss_dssp             --CTTCEEEEEECSSHH
T ss_pred             --ccccccceeeecchh
Confidence              236799998876653

>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Transcription-repair coupling factor, TRCF
species: Escherichia coli [TaxId: 562]

Probab=81.13  E-value=2.9  Score=33.28  Aligned_cols=67  Identities=9%  Similarity=0.115  Sum_probs=54.9

Q ss_pred             HHHCCCEEEEEeCCcchHHHHHHHHHhhcCCCcEEEEEecCCChHHHHHHHHHHHHHHhccCCCCCccEEEecccc
Q 017580           83 LSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  158 (369)
Q Consensus        83 La~~G~~Vvl~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~i~~~~~~i~~~~~~~~~~~~id~lv~nAG~  158 (369)
                      =..+|-+|+.++-.-+..++..+.+++..++.++..+...+++ ++.++.+....+        +.+|+||+..=+
T Consensus        27 El~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~-~eke~im~~F~~--------g~~~ILv~TtvI   93 (211)
T d2eyqa5          27 EILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRE-RELERVMNDFHH--------QRFNVLVCTTII   93 (211)
T ss_dssp             HHTTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCH-HHHHHHHHHHHT--------TSCCEEEESSTT
T ss_pred             HHHcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCH-HHHHHHHHHHHc--------CCcceEEEehhh
Confidence            3457999999999888899999999999999999999999975 556666666654        889999988743

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=81.12  E-value=0.63  Score=39.13  Aligned_cols=31  Identities=19%  Similarity=0.433  Sum_probs=26.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-EEEEEeCCc
Q 017580           66 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSS   97 (369)
Q Consensus        66 vlITGas~gIG~~~a~~La~~G~-~Vvl~~r~~   97 (369)
                      |+|.|| |-+|.++|.+|+++|. +|+++.|+.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            788887 4799999999999997 699998864