Citrus Sinensis ID: 017639


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MKNSQSTQEIQSSTQVSHESQSDQQNNQTTEAPLADSGSISASSNDSRKVSRQDIELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKYPVPQKVPLAPMQNGIHPMPVNNLPMGYPVLQQPPIPAAGQPHLESMSSGISSCHVVNGVPAPGNFHPMRMNSGNDMVMDTSAAEVAPVIPPSSGVSSMSEMAMSPTSVASSGHFPFTASDMSGMGMDTGALDTTFTSDVASTVGLQLGQDGGAGNSRDSLRSLDQIQWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSEILLDSPEQDDIEEFFVDSVPGPPCSQSDEEKS
cccccHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccHHHHHccccccccccccccccc
cccccccHHcccccccccccccccccccccccccccccccEccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccHHHHHEEcccccccccccccccc
mknsqstqeiqsstqvshesqsdqqnnqtteapladsgsisassndsrkvSRQDIELVQNLIERCLQLYMNRDEVVKTLLTraridpgfTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYhlmkypvpqkvplapmqngihpmpvnnlpmgypvlqqppipaagqphlesmssgisschvvngvpapgnfhpmrmnsgndmvmdtsaaevapvippssgvssmsemamsptsvassghfpftasdmsgmgmdtgaldttftsdvASTVGlqlgqdggagnsrdSLRSLDQIQWNFSLSDLTADlsnlgdlgalgnypgspflpsdseilldspeqddieeffvdsvpgppcsqsdeeks
mknsqstqeiqssTQVSHESQSDQQNNQTteapladsgsisassndsrkvsRQDIELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKYPVPQKVPLAPMQNGIHPMPVNNLPMGYPVLQQPPIPAAGQPHLESMSSGISSCHVVNGVPAPGNFHPMRMNSGNDMVMDTSAAEVAPVIPPSSGVSSMSEMAMSPTSVASSGHFPFTASDMSGMGMDTGALDTTFTSDVASTVGLQLGQDGGAGNSRDSLRSLDQIQWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSEILLDSPEQDDIEEFFVDSvpgppcsqsdeeks
MKNsqstqeiqsstqvsHESQSDQQNNQTTEAPLadsgsisassndsRKVSRQDIELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKYPVPQKVPLAPMQNGIHPMPVNNLPMGYPVLQQPPIPAAGQPHLESMSSGISSCHVVNGVPAPGNFHPMRMNSGNDMVMDTSAAEVAPVIPPSSGVSSMSEMAMSPTSVASSGHFPFTASDMSGMGMDTGALDTTFTSDVASTVGLQLGQDGGAGNSRDSLRSLDQIQWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSEILLDSPEQDDIEEFFVDSVPGPPCSQSDEEKS
******************************************************IELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKYPVPQKVPLAPMQNGIH***V**L**GY***************************************************************************************************************************************LDQIQWNFSLSDLTADLSNLGDLGALGNYP******************************************
******************************************************IELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLK**************************************************************************************************************************************FTASDMSGMGMD**************************************IQWNFSLSDLTADLSNLGDL*************************************************
***************************************************RQDIELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKYPVPQKVPLAPMQNGIHPMPVNNLPMGYPVLQQPPIPAAGQPHLESMSSGISSCHVVNGVPAPGNFHPMRMNSGNDMVMDTSAAEVAPVIPP*****************ASSGHFPFTASDMSGMGMDTGALDTTFTSDVASTVGLQLGQDGGAGNSRDSLRSLDQIQWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSEILLDSPEQDDIEEFFVDSVPG***********
*************************************************VSRQDIELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKYPVPQKVPLAPMQNGIHPMPVNNLPMGYPVLQQPPIPAAGQPHLESMSSGISSCHVVNGVPAPGNFHPMRMNSGNDMVMDTSAAEVAPVIPPSSGVSSMSEMAMSPTSVASSGHFPFTASDMSGMGMDTGALDTT******************AGNSRDSLRSLDQIQWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSEILLDSPEQDDIEEFFVDSVPG***********
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MKNSQSTQEIQSSTQVSHESQSDQQNNQTTEAPLADSGSISASSNDSRKVSRQDIELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKYPVPQKVPLAPMQNGIHPMPVNNLPMGYPVLQQPPIPAAGQPHLESMSSGISSCHVVNGVPAPGNFHPMRMNSGNDMVMDTSAAEVAPVIPPSSGVSSMSEMAMSPTSVASSGHFPFTASDMSGMGMDTGALDTTFTSDVASTVGLQLGQDGGAGNSRDSLRSLDQIQWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSEILLDSPEQDDIEEFFVDSVPGPPCSQSDEEKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
224064222362 predicted protein [Populus trichocarpa] 0.980 0.997 0.859 1e-179
359489725371 PREDICTED: uncharacterized protein LOC10 0.997 0.989 0.856 1e-174
297745427368 unnamed protein product [Vitis vinifera] 0.997 0.997 0.859 1e-174
18407071363 uncharacterized protein [Arabidopsis tha 0.983 0.997 0.804 1e-171
224127919362 predicted protein [Populus trichocarpa] 0.980 0.997 0.848 1e-171
356560315363 PREDICTED: uncharacterized protein LOC10 0.983 0.997 0.799 1e-170
363814412363 uncharacterized protein LOC100809202 [Gl 0.983 0.997 0.796 1e-170
297824713361 hypothetical protein ARALYDRAFT_483796 [ 0.978 0.997 0.799 1e-168
297817504358 hypothetical protein ARALYDRAFT_486659 [ 0.961 0.988 0.778 1e-160
186508621345 uncharacterized protein [Arabidopsis tha 0.926 0.988 0.804 1e-159
>gi|224064222|ref|XP_002301406.1| predicted protein [Populus trichocarpa] gi|222843132|gb|EEE80679.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 317/369 (85%), Positives = 337/369 (91%), Gaps = 8/369 (2%)

Query: 1   MKNSQSTQEIQSSTQVSHESQSDQQNNQTTEAPLADSGSISASSNDSRKVSRQDIELVQN 60
           MK  QS QE QSSTQVS +SQS+QQNN   E P+ADSGS SASSNDSRKVSRQDIELVQN
Sbjct: 1   MKTLQSAQE-QSSTQVSQDSQSEQQNNHNIEPPVADSGSKSASSNDSRKVSRQDIELVQN 59

Query: 61  LIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILL 120
           LIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILL
Sbjct: 60  LIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILL 119

Query: 121 FNHLLEHQYHLMKYPVPQKVPLAPMQNGIHPMPVNNLPMGYPVLQQPPIPAAGQPHLESM 180
           FN+LLEHQYHLMKYPV  KVPLAP+QNGIHPMPVNNLPMGYPVLQQPP+   GQPHL+SM
Sbjct: 120 FNYLLEHQYHLMKYPVATKVPLAPIQNGIHPMPVNNLPMGYPVLQQPPMATPGQPHLDSM 179

Query: 181 SSGISSCHVVNGVPAPGNFHPMRMNSGNDMVMDTSAAEVAPVIPPSSGVSSMSEMAMSPT 240
             G+SSCHVVNGVPAPGNFHP+RMNSGNDMVM+ SA +   V+PPSS +SS+SEM +SPT
Sbjct: 180 GCGVSSCHVVNGVPAPGNFHPIRMNSGNDMVMENSATDTTHVVPPSSTISSLSEMPVSPT 239

Query: 241 SVASSGHFPFTASDMSGMGMDTGALDTTFTSDVASTVGLQLGQDGGAGNSRDSLRSLDQI 300
           SVASSGHFPFTASDM+GMG+DT ALDTTFTSDVAS+VGLQLGQDGGAGNS    RSLDQI
Sbjct: 240 SVASSGHFPFTASDMAGMGVDT-ALDTTFTSDVASSVGLQLGQDGGAGNS----RSLDQI 294

Query: 301 QWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSEILLDSPEQDDI-EEFFVDSVPGPP 359
           QWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSEILLDSPE +DI EEFFVDSVPGPP
Sbjct: 295 QWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSEILLDSPENEDIVEEFFVDSVPGPP 354

Query: 360 CSQSDEEKS 368
            SQSDEE+S
Sbjct: 355 -SQSDEERS 362




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489725|ref|XP_002281449.2| PREDICTED: uncharacterized protein LOC100265382 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745427|emb|CBI40507.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|18407071|ref|NP_566074.1| uncharacterized protein [Arabidopsis thaliana] gi|15450511|gb|AAK96548.1| At2g46420/F11C10.11 [Arabidopsis thaliana] gi|20197824|gb|AAD23044.2| expressed protein [Arabidopsis thaliana] gi|27363256|gb|AAO11547.1| At2g46420/F11C10.11 [Arabidopsis thaliana] gi|330255598|gb|AEC10692.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224127919|ref|XP_002320196.1| predicted protein [Populus trichocarpa] gi|222860969|gb|EEE98511.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356560315|ref|XP_003548438.1| PREDICTED: uncharacterized protein LOC100809603 [Glycine max] Back     alignment and taxonomy information
>gi|363814412|ref|NP_001242843.1| uncharacterized protein LOC100809202 [Glycine max] gi|255641376|gb|ACU20965.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|297824713|ref|XP_002880239.1| hypothetical protein ARALYDRAFT_483796 [Arabidopsis lyrata subsp. lyrata] gi|297326078|gb|EFH56498.1| hypothetical protein ARALYDRAFT_483796 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297817504|ref|XP_002876635.1| hypothetical protein ARALYDRAFT_486659 [Arabidopsis lyrata subsp. lyrata] gi|297322473|gb|EFH52894.1| hypothetical protein ARALYDRAFT_486659 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|186508621|ref|NP_001118536.1| uncharacterized protein [Arabidopsis thaliana] gi|330255599|gb|AEC10693.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
TAIR|locus:2039069363 AT2G46420 "AT2G46420" [Arabido 0.945 0.958 0.781 1.2e-147
TAIR|locus:2076805364 AT3G61700 "AT3G61700" [Arabido 0.961 0.972 0.718 3.7e-135
TAIR|locus:2076299324 AT3G10250 "AT3G10250" [Arabido 0.785 0.891 0.394 1.6e-40
TAIR|locus:2146728305 AT5G04090 "AT5G04090" [Arabido 0.364 0.439 0.518 2.3e-30
TAIR|locus:210067695 AT3G55240 "AT3G55240" [Arabido 0.173 0.673 0.421 1.4e-09
TAIR|locus:2827299401 AT2G29605 "AT2G29605" [Arabido 0.459 0.421 0.280 2.1e-09
TAIR|locus:208699288 AT3G28990 "AT3G28990" [Arabido 0.168 0.704 0.428 2.9e-08
TAIR|locus:218183891 AT5G02580 "AT5G02580" [Arabido 0.146 0.593 0.425 7.6e-07
TAIR|locus:504956077110 AT2G11623 "AT2G11623" [Arabido 0.176 0.590 0.338 1.3e-06
TAIR|locus:4010713425125 AT1G10657 "AT1G10657" [Arabido 0.108 0.32 0.5 0.00015
TAIR|locus:2039069 AT2G46420 "AT2G46420" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
 Identities = 275/352 (78%), Positives = 302/352 (85%)

Query:    18 HESQSDQQNNQTTEAPLXXXXXXXXXXXXXRKVSRQDIELVQNLIERCLQLYMNRDEVVK 77
             HESQ +Q+ N + EAP+             RKVSRQDIELVQNLIERCLQLYM+RDEVVK
Sbjct:    15 HESQGEQKVNLSVEAPIQDSGSVSASSNDGRKVSRQDIELVQNLIERCLQLYMSRDEVVK 74

Query:    78 TLLTRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKYPVP 137
             TLLTRARIDPGFTTLVWQKLEEENA+FFRAYYIRLKLKKQI++FNHLLEHQYHL KY V 
Sbjct:    75 TLLTRARIDPGFTTLVWQKLEEENAEFFRAYYIRLKLKKQIVVFNHLLEHQYHLTKYNVH 134

Query:   138 QKVPLAPMQNGIHPMP-VNNLPMGYPVLQQPPIPAAGQPHLESMSSGISSCHVVNGVPAP 196
              KVPL PMQNGIHPM  VNN+PMGYPVLQ P + A G PHL+ MS G+SSCHVVNGVPAP
Sbjct:   135 SKVPLVPMQNGIHPMASVNNMPMGYPVLQHPQMHAQGHPHLDPMSCGMSSCHVVNGVPAP 194

Query:   197 GNFHPMRMNSGNDMVMDTSAAEVAPVIPPSSGVSSMSEMAMSPTSVASSGHFPFTASDMS 256
              NF PMR+NSGNDMV+DT+ AE  P+IPP+SG   MS+M +SP SVASSGHFPF ASDMS
Sbjct:   195 ANFQPMRINSGNDMVIDTTMAEPTPMIPPNSG---MSDMPVSPASVASSGHFPFAASDMS 251

Query:   257 GMGMDTGALDTTFTSDVASTVGLQLGQDGGAGNSRDSLRSLDQIQWNFSLSDLTADLSNL 316
             GMGMDT ALD+ FTSDV ++VGLQLG DGGAGNSRD LR  DQI WNFSLSDLTADLSNL
Sbjct:   252 GMGMDTSALDSAFTSDVGTSVGLQLGSDGGAGNSRDPLRPFDQIPWNFSLSDLTADLSNL 311

Query:   317 GDLGALGNYPGSPFLPSDSEILLDSPEQDDIEEFFVDSVPGPPCSQSDEEKS 368
             GDLGALGNYPGSPFLPSDSEILLDSPEQ+DI+EFFVDS+PGPPCSQS+E+KS
Sbjct:   312 GDLGALGNYPGSPFLPSDSEILLDSPEQEDIDEFFVDSIPGPPCSQSEEDKS 363




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2076805 AT3G61700 "AT3G61700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076299 AT3G10250 "AT3G10250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146728 AT5G04090 "AT5G04090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100676 AT3G55240 "AT3G55240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827299 AT2G29605 "AT2G29605" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086992 AT3G28990 "AT3G28990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181838 AT5G02580 "AT5G02580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956077 AT2G11623 "AT2G11623" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4010713425 AT1G10657 "AT1G10657" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
TIGR0158957 TIGR01589, A_thal_3526, uncharacterized plant-spec 2e-30
pfam0971354 pfam09713, A_thal_3526, Plant protein 1589 of unkn 1e-28
>gnl|CDD|130650 TIGR01589, A_thal_3526, uncharacterized plant-specific domain TIGR01589 Back     alignment and domain information
 Score =  109 bits (275), Expect = 2e-30
 Identities = 31/57 (54%), Positives = 37/57 (64%)

Query: 55  IELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIR 111
           I+LVQN IE C+Q YM+++E V  L   A I P FT  VW  LE+ENADFFR Y   
Sbjct: 1   IDLVQNRIETCIQGYMSKEETVSFLFENAGISPKFTRFVWYLLEKENADFFRCYKTH 57


This model represents an uncharacterized plant-specific domain 57 residues in length. It is found toward the N-terminus of most proteins that contain it. Examples include at least 10 proteins from Arabidopsis thaliana and at least one from Oryza sativa. Length = 57

>gnl|CDD|192339 pfam09713, A_thal_3526, Plant protein 1589 of unknown function (A_thal_3526) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 368
TIGR0158957 A_thal_3526 uncharacterized plant-specific domain 99.97
PF0971354 A_thal_3526: Plant protein 1589 of unknown functio 99.97
>TIGR01589 A_thal_3526 uncharacterized plant-specific domain TIGR01589 Back     alignment and domain information
Probab=99.97  E-value=3.3e-32  Score=207.50  Aligned_cols=57  Identities=54%  Similarity=0.898  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHhcCCCCcchHHHHHHHHHHcHHHHHHHHHH
Q 017639           55 IELVQNLIERCLQLYMNRDEVVKTLLTRARIDPGFTTLVWQKLEEENADFFRAYYIR  111 (368)
Q Consensus        55 I~~VQnLIErCLqlyMsk~Evv~~L~~~a~I~P~fT~~VW~kLEeeNpeFFkaYy~R  111 (368)
                      |++|||||||||++||||+|||++|++||||+|+||++||++||+||||||+|||+|
T Consensus         1 i~~Vq~lIE~Cl~~yMsk~E~v~~L~~~a~I~P~~T~~VW~~LekeN~eFF~aY~~~   57 (57)
T TIGR01589         1 IDLVQNRIETCIQGYMSKEETVSFLFENAGISPKFTRFVWYLLEKENADFFRCYKTH   57 (57)
T ss_pred             CHHHHHHHHHHHHHHCCHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHhcC
Confidence            789999999999999999999999999999999999999999999999999999986



This model represents an uncharacterized plant-specific domain 57 residues in length. It is found toward the N-terminus of most proteins that contain it. Examples include at least 10 proteins from Arabidopsis thaliana and at least one from Oryza sativa.

>PF09713 A_thal_3526: Plant protein 1589 of unknown function (A_thal_3526); InterPro: IPR006476 This plant-specific family of proteins are defined by an uncharacterised region 57 residues in length Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00