Citrus Sinensis ID: 017640

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MEAVVPKLASFNLLNPKSKSKSAIRRFSSALCVSSSPSVTSTDSVSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTTL
ccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccCEEECcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccHHHHHHHHHHHHHHcccccccEEEEEcccccccccHHHHHHHHHccEEEEECccccccccHHHHHHHccccccEEEEEEEccccccccHHHHHHHHHHHcccEEEEEccccccccccccccccccEEEEccccccccccccHHHccHHHHHcccccccccccccEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccc
*********************************************SLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTTL
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEAVVPKLASFNLLNPKSKSKSAIRRFSSALCVSSSPSVTSTDSVSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTTL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cysteine desulfurase 2, chloroplastic Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. Supplies the inorganic sulfur for iron-sulfur (Fe-S) clusters.probableQ93WX6
Cysteine desulfurase Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L-selenocysteine. Selenocysteine lyase activity is however unsure in vivo.probableA7MF59
Probable cysteine desulfurase Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.probableQ9XAD5

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
2.-.-.-Transferases.probable
4.4.-.-Carbon-sulfur lyases.probable
2.8.-.-Transferring sulfur-containing groups.probable
4.4.1.-Carbon-sulfur lyases.probable
2.8.1.-12-beta-hydroxysteroid dehydrogenase.probable
4.4.1.16Selenocysteine lyase.probable
2.8.1.7Cysteine desulfurase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1T3I, chain A
Confidence level:very confident
Coverage over the Query: 45-366
View the alignment between query and template
View the model in PyMOL