Citrus Sinensis ID: 017652


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHccccccEEEEcccccEEEEEEEccEEEEEEEcccEEEEEEcccccEEEEcccccccccccccEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHcc
ccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEccccccccccccccccccccccHcccccHHHHEEEEcccccccccccHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHcccccEEEEEcccEEEEEEEEccEEEEEEEccEEEEEcccccccEEEEcccccccccccccEEEEEcEEEEccccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHc
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTslrgrkqvsgcnlfqgrwvidpsyplydssscpfidaefdclkygrpdkqylkyswqpascavprfdggdflrryrgkrimfvgdSLSLNMWESLSCMIhasvpnaktsfvrketlssvsfEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNsiqagkfwkDMDVLIFNSWHwwthtgkaqprrwdyIQDGQTLLKDMDRLEAFYKGMSTWARWvdlnvdpsqtkvffqgispthytgkewnsrkknclgeleplsgstypggappaASVVNKVLSsinkpvyllDITTLsqlrkdahpstysgkhsgtdcshwclpglpdtWNQLLYAALTM
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYnvtslrgrkqVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKqylkyswqpascavprFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWThtgkaqprrwDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPthytgkewnsrkKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
MGFGSHvllfwlfqfvllSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
***GSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLG******************SVVNKVLSSINKPVYLLDITTLSQLR************SGTDCSHWCLPGLPDTWNQLLYAAL**
*GFGSHVLLFWLFQFVLLSSMLL*************************LFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKD************TDCSHWCLPGLPDTWNQLLYAALTM
*GFGSHVLLFWLFQFVLLSSMLLKEAE*****************SGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
255563106370 conserved hypothetical protein [Ricinus 0.989 0.983 0.745 1e-161
224114702362 predicted protein [Populus trichocarpa] 0.983 1.0 0.725 1e-157
449462645373 PREDICTED: uncharacterized protein LOC10 0.975 0.962 0.713 1e-155
356555410375 PREDICTED: uncharacterized protein LOC10 0.923 0.906 0.736 1e-153
357446949360 hypothetical protein MTR_2g015720 [Medic 0.972 0.994 0.702 1e-153
224076992411 predicted protein [Populus trichocarpa] 0.983 0.880 0.654 1e-152
388514377361 unknown [Lotus japonicus] 0.970 0.988 0.704 1e-151
356521442368 PREDICTED: uncharacterized protein LOC10 0.978 0.978 0.691 1e-151
297851330380 hypothetical protein ARALYDRAFT_473111 [ 0.896 0.868 0.738 1e-151
18396930380 protein trichome birefringence-like 38 [ 0.896 0.868 0.735 1e-151
>gi|255563106|ref|XP_002522557.1| conserved hypothetical protein [Ricinus communis] gi|223538248|gb|EEF39857.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/374 (74%), Positives = 318/374 (85%), Gaps = 10/374 (2%)

Query: 1   MGFGS----HVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSL-RGRKQVSG-CNLFQGRW 54
           MGF S     VL+    Q VLL +  L+E  A+QH YNVT L +GRKQVS  CNLFQG+W
Sbjct: 1   MGFSSKSRCQVLVSLFSQLVLLFT-FLQETTAQQHYYNVTRLLKGRKQVSSTCNLFQGKW 59

Query: 55  VIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGK 114
           V+DP+YPLYD+S CPFID EF+C K+GRPD QYLKYSWQP SC VPRF+G DFLRR+RGK
Sbjct: 60  VVDPAYPLYDASGCPFIDPEFNCQKFGRPDTQYLKYSWQPDSCNVPRFNGVDFLRRWRGK 119

Query: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVD 174
           +IMFVGDSLSLNMWESLSCMIHASVPNAKTS V +++L SV+F+EY VTL ++RTPYLVD
Sbjct: 120 KIMFVGDSLSLNMWESLSCMIHASVPNAKTSSVDRDSLHSVTFDEYDVTLYMFRTPYLVD 179

Query: 175 IVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMD 234
           IV++ VGRVL L+SI+ G  WK MD+LIFNSWHWWTHTG++QP  WDY++ G +L KDMD
Sbjct: 180 IVRESVGRVLRLDSIEGGNAWKGMDLLIFNSWHWWTHTGRSQP--WDYVRAGASLYKDMD 237

Query: 235 RLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGST 294
           RLEAFY+GMSTWA+WVD NVDP++TKVFFQGISPTHY G+EWN  KK+C GE EPLSGST
Sbjct: 238 RLEAFYRGMSTWAKWVDQNVDPAKTKVFFQGISPTHYEGREWNQPKKSCNGEAEPLSGST 297

Query: 295 YPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGL 354
           YPGGAPPA +VVNKVLS+I KPVYLLDITTLSQLRKDAHPSTY G  SGTDCSHWCLPGL
Sbjct: 298 YPGGAPPAVAVVNKVLSTIKKPVYLLDITTLSQLRKDAHPSTY-GDGSGTDCSHWCLPGL 356

Query: 355 PDTWNQLLYAALTM 368
           PDTWNQLLYAAL M
Sbjct: 357 PDTWNQLLYAALVM 370




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114702|ref|XP_002316834.1| predicted protein [Populus trichocarpa] gi|222859899|gb|EEE97446.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449462645|ref|XP_004149051.1| PREDICTED: uncharacterized protein LOC101203509 [Cucumis sativus] gi|449509029|ref|XP_004163473.1| PREDICTED: uncharacterized LOC101203509 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356555410|ref|XP_003546025.1| PREDICTED: uncharacterized protein LOC100818476 [Glycine max] Back     alignment and taxonomy information
>gi|357446949|ref|XP_003593750.1| hypothetical protein MTR_2g015720 [Medicago truncatula] gi|355482798|gb|AES64001.1| hypothetical protein MTR_2g015720 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224076992|ref|XP_002305083.1| predicted protein [Populus trichocarpa] gi|222848047|gb|EEE85594.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388514377|gb|AFK45250.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356521442|ref|XP_003529365.1| PREDICTED: uncharacterized protein LOC100803167 [Glycine max] Back     alignment and taxonomy information
>gi|297851330|ref|XP_002893546.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] gi|297339388|gb|EFH69805.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18396930|ref|NP_564318.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] gi|18377638|gb|AAL66969.1| unknown protein [Arabidopsis thaliana] gi|20465655|gb|AAM20296.1| unknown protein [Arabidopsis thaliana] gi|110742767|dbj|BAE99289.1| hypothetical protein [Arabidopsis thaliana] gi|332192916|gb|AEE31037.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
TAIR|locus:2029959380 TBL38 "AT1G29050" [Arabidopsis 0.896 0.868 0.735 2.8e-144
TAIR|locus:2055425385 TBL37 "AT2G34070" [Arabidopsis 0.894 0.854 0.725 2.1e-141
TAIR|locus:2041574367 TBL39 "AT2G42570" [Arabidopsis 0.880 0.882 0.636 4.6e-121
TAIR|locus:2055878364 AT2G31110 "AT2G31110" [Arabido 0.910 0.920 0.606 1.6e-118
TAIR|locus:2099402356 TBL41 "TRICHOME BIREFRINGENCE- 0.858 0.887 0.560 4.2e-102
TAIR|locus:2037498359 TBL42 "TRICHOME BIREFRINGENCE- 0.877 0.899 0.521 7.1e-100
TAIR|locus:2178813402 PMR5 "AT5G58600" [Arabidopsis 0.869 0.796 0.504 1.6e-88
TAIR|locus:2045688398 TBL45 "AT2G30010" [Arabidopsis 0.796 0.736 0.459 4.3e-70
TAIR|locus:2080280379 TBL36 "AT3G54260" [Arabidopsis 0.866 0.841 0.408 2.1e-68
TAIR|locus:2096094475 TBL6 "AT3G62390" [Arabidopsis 0.872 0.675 0.390 2e-65
TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
 Identities = 247/336 (73%), Positives = 293/336 (87%)

Query:    36 TSLRGRKQ--VSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQ 93
             +SLRG+KQ   SGCNLFQGRWV D SYP YDSS CPFID EFDCLK+GRPDKQ+LKYSWQ
Sbjct:    48 SSLRGKKQRRASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQ 107

Query:    94 PASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLS 153
             P SC +PRFDGG FLR+YRGKR+MFVGDSLSLNMWESL+CMIHASVPNAKT+F+++  LS
Sbjct:   108 PESCTIPRFDGGAFLRKYRGKRVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLS 167

Query:   154 SVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGK-FWKDMDVLIFNSWHWWTHT 212
             +++F+EYGVTL LYRTPY+VDI K++VGRVL L +I+ G   WK+MDVL+FNSWHWWTH 
Sbjct:   168 TLTFQEYGVTLYLYRTPYIVDISKERVGRVLNLGAIEGGADAWKNMDVLVFNSWHWWTHK 227

Query:   213 GKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYT 272
             G++Q   WDYI+DG +L++DM+RL+AFYKG+STWARWVD NVD ++T+VFFQGISPTHY 
Sbjct:   228 GQSQG--WDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHYE 285

Query:   273 GKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDA 332
             G+EWN  +K C G+++PL GS+YP G PP++ VV+KVLSS+ KPV LLDITTLSQLRKDA
Sbjct:   286 GREWNEPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLSQLRKDA 345

Query:   333 HPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM 368
             HPS+Y G   GTDCSHWCLPGLPDTWNQLLYAALTM
Sbjct:   346 HPSSYGGD-GGTDCSHWCLPGLPDTWNQLLYAALTM 380




GO:0008150 "biological_process" evidence=ND
TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 1e-144
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 1e-104
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 1e-25
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  412 bits (1060), Expect = e-144
 Identities = 186/337 (55%), Positives = 223/337 (66%), Gaps = 17/337 (5%)

Query: 45  SGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFD 103
           S C LF G WV D SYPLY SS CP  ID EF+C  YGRPD  YLKY WQP +C +PRF+
Sbjct: 51  STCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFN 110

Query: 104 GGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVT 163
           G +FL + +GK +MFVGDSL  N WESL C+I +SVP+ +T   R + LS+  F +YGV+
Sbjct: 111 GLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVS 170

Query: 164 LLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMDVLIFNSWHWWTHTGKAQPRRWDY 222
           +  Y+ PYLVDI   +  RVL L  I      W+D DVLIFN+ HWW+H G  Q   WDY
Sbjct: 171 ISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQG--WDY 228

Query: 223 IQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWN----S 278
           I+ G T  +DMDRL A  K + TWA WVD NVD S+T+VFFQ ISPTHY   EW+    +
Sbjct: 229 IESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAST 288

Query: 279 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYS 338
             KNC GE  P+SG TYPG  P    VV++V+  ++ P YLLDIT LS+LRKD HPS YS
Sbjct: 289 TTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYS 348

Query: 339 GKHSGT---------DCSHWCLPGLPDTWNQLLYAAL 366
           G  S +         DCSHWCLPGLPDTWNQL Y AL
Sbjct: 349 GDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL 385


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 368
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.94
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.53
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 95.6
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 94.8
COG2845354 Uncharacterized protein conserved in bacteria [Fun 87.36
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 85.19
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=7.8e-116  Score=863.23  Aligned_cols=325  Identities=57%  Similarity=1.103  Sum_probs=300.5

Q ss_pred             CCCCCCcCcccceeeCCCCCCCCCCCCC-CCccccccccCCCCCcccccceeecCCCCCCCCChHHHHHHhcCCeEEEEe
Q 017652           42 KQVSGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVG  120 (368)
Q Consensus        42 ~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpD~~y~~wrWqP~~C~LprFd~~~fL~~lRgK~i~FVG  120 (368)
                      ...+.||+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||||||.+||++||||+|||||
T Consensus        48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG  127 (387)
T PLN02629         48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG  127 (387)
T ss_pred             CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence            4457899999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHhhhhccCCCCceeeeecCceeEEEEeecCeEEEEEecccceecccccccceEEeccccc-CCCCCCcc
Q 017652          121 DSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMD  199 (368)
Q Consensus       121 DSl~Rnq~~SL~ClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~i~~-~~~~~~~D  199 (368)
                      |||+|||||||+|||++++|...+....+++..+|+|++||+||+||||||||+.+.....++|+||+++. ++.|+++|
T Consensus       128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~D  207 (387)
T PLN02629        128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDAD  207 (387)
T ss_pred             cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCC
Confidence            99999999999999999988765445556778999999999999999999999987666567899999987 78999999


Q ss_pred             EEEEeccccccccCCCCCCcccccccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCcC
Q 017652          200 VLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSR  279 (368)
Q Consensus       200 vlV~ntG~Ww~~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~l~~~~~~Vf~Rt~sP~Hf~~g~W~~~  279 (368)
                      ||||||||||.+++..++  ++|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+||+||+||..
T Consensus       208 vlVfntghWw~~~~~~~~--~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~g  285 (387)
T PLN02629        208 VLIFNTGHWWSHQGSLQG--WDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAG  285 (387)
T ss_pred             EEEEeCccccCCCCeeEE--eeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCC
Confidence            999999999999988888  899999999899999999999999999999999999889999999999999999999942


Q ss_pred             ----CCCCCCCcccCCCCCCCCCCchHHHHHHHHHhcCCCCeeEeeccccccccccCCCCCCCCC---------CCCCCc
Q 017652          280 ----KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGK---------HSGTDC  346 (368)
Q Consensus       280 ----gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDIt~ls~~R~DaHp~~y~~~---------~~~~DC  346 (368)
                          +|+|+++|+|+.++++.++...+++++++++++++.+|++||||+||++|||||||+|++.         ..++||
T Consensus       286 g~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC  365 (387)
T PLN02629        286 ASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADC  365 (387)
T ss_pred             CCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCc
Confidence                2579999999998877777777888999999999999999999999999999999999642         346899


Q ss_pred             ccccCCCchhHHHHHHHHHHhC
Q 017652          347 SHWCLPGLPDTWNQLLYAALTM  368 (368)
Q Consensus       347 ~HWClPGv~D~WN~lL~~~L~~  368 (368)
                      +||||||||||||||||++|+.
T Consensus       366 ~HWCLPGvpDTWNelL~a~L~~  387 (387)
T PLN02629        366 SHWCLPGLPDTWNQLFYTALFF  387 (387)
T ss_pred             ccccCCCCCccHHHHHHHHHhC
Confidence            9999999999999999999974



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query368
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 96.68
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=96.68  E-value=0.0016  Score=56.88  Aligned_cols=109  Identities=14%  Similarity=0.136  Sum_probs=63.2

Q ss_pred             CccEEEEeccccccccCCCCCCcccccccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCcc
Q 017652          197 DMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEW  276 (368)
Q Consensus       197 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~l~~~~~~Vf~Rt~sP~Hf~~g~W  276 (368)
                      .+|+|||+.|..=..                      .-.+.|+..|+++.+-+.+..  ++++|+|-+..|.....  +
T Consensus        74 ~pd~Vvi~~G~ND~~----------------------~~~~~~~~~l~~ii~~l~~~~--p~~~ii~~~~~P~~~~~--~  127 (200)
T 4h08_A           74 KFDVIHFNNGLHGFD----------------------YTEEEYDKSFPKLIKIIRKYA--PKAKLIWANTTPVRTGE--G  127 (200)
T ss_dssp             CCSEEEECCCSSCTT----------------------SCHHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCEESG--G
T ss_pred             CCCeEEEEeeeCCCC----------------------CCHHHHHHHHHHHHHHHhhhC--CCccEEEeccCCCcccc--c
Confidence            469999999975210                      014568888888877765532  46789999998865421  1


Q ss_pred             CcCCCCCCCCcccCCCCCCCCCCchHHHHHHHHHhcCCCCeeEeeccccccccccCCCCCCCCCCCCCCcccccCCC
Q 017652          277 NSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPG  353 (368)
Q Consensus       277 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDIt~ls~~R~DaHp~~y~~~~~~~DC~HWClPG  353 (368)
                      .    ....+        ........+++++++.++  ..+.++|+...+.-+++.    +    ...|-+|.---|
T Consensus       128 ~----~~~~~--------~~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~~~~~~----~----~~~Dg~Hpn~~G  182 (200)
T 4h08_A          128 M----KEFAP--------ITERLNVRNQIALKHINR--ASIEVNDLWKVVIDHPEY----Y----AGGDGTHPIDAG  182 (200)
T ss_dssp             G----CEECT--------HHHHHHHHHHHHHHHHHH--TTCEEECHHHHHTTCGGG----T----TTSCSSSCCHHH
T ss_pred             c----cccch--------hHHHHHHHHHHHHHHhhh--cceEEEecHHhHhcCHHH----h----cCCCCCCCCHHH
Confidence            1    00000        000012345666776665  469999998766533322    1    135777765544




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query368
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 97.02
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 96.41
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 84.59
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein Lp3323
species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.02  E-value=0.0005  Score=57.56  Aligned_cols=15  Identities=33%  Similarity=0.448  Sum_probs=12.6

Q ss_pred             hcCCeEEEEechhhH
Q 017652          111 YRGKRIMFVGDSLSL  125 (368)
Q Consensus       111 lRgK~i~FVGDSl~R  125 (368)
                      +..|||+|+|||++-
T Consensus         2 ~~~kri~~iGDSit~   16 (207)
T d3dc7a1           2 VSFKRPAWLGDSITA   16 (207)
T ss_dssp             BCCSSEEEEESTTTS
T ss_pred             CCCCEEEEEehHhhc
Confidence            346899999999984



>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure