Citrus Sinensis ID: 017652
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 368 | ||||||
| 255563106 | 370 | conserved hypothetical protein [Ricinus | 0.989 | 0.983 | 0.745 | 1e-161 | |
| 224114702 | 362 | predicted protein [Populus trichocarpa] | 0.983 | 1.0 | 0.725 | 1e-157 | |
| 449462645 | 373 | PREDICTED: uncharacterized protein LOC10 | 0.975 | 0.962 | 0.713 | 1e-155 | |
| 356555410 | 375 | PREDICTED: uncharacterized protein LOC10 | 0.923 | 0.906 | 0.736 | 1e-153 | |
| 357446949 | 360 | hypothetical protein MTR_2g015720 [Medic | 0.972 | 0.994 | 0.702 | 1e-153 | |
| 224076992 | 411 | predicted protein [Populus trichocarpa] | 0.983 | 0.880 | 0.654 | 1e-152 | |
| 388514377 | 361 | unknown [Lotus japonicus] | 0.970 | 0.988 | 0.704 | 1e-151 | |
| 356521442 | 368 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 0.978 | 0.691 | 1e-151 | |
| 297851330 | 380 | hypothetical protein ARALYDRAFT_473111 [ | 0.896 | 0.868 | 0.738 | 1e-151 | |
| 18396930 | 380 | protein trichome birefringence-like 38 [ | 0.896 | 0.868 | 0.735 | 1e-151 |
| >gi|255563106|ref|XP_002522557.1| conserved hypothetical protein [Ricinus communis] gi|223538248|gb|EEF39857.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 279/374 (74%), Positives = 318/374 (85%), Gaps = 10/374 (2%)
Query: 1 MGFGS----HVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSL-RGRKQVSG-CNLFQGRW 54
MGF S VL+ Q VLL + L+E A+QH YNVT L +GRKQVS CNLFQG+W
Sbjct: 1 MGFSSKSRCQVLVSLFSQLVLLFT-FLQETTAQQHYYNVTRLLKGRKQVSSTCNLFQGKW 59
Query: 55 VIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGK 114
V+DP+YPLYD+S CPFID EF+C K+GRPD QYLKYSWQP SC VPRF+G DFLRR+RGK
Sbjct: 60 VVDPAYPLYDASGCPFIDPEFNCQKFGRPDTQYLKYSWQPDSCNVPRFNGVDFLRRWRGK 119
Query: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVD 174
+IMFVGDSLSLNMWESLSCMIHASVPNAKTS V +++L SV+F+EY VTL ++RTPYLVD
Sbjct: 120 KIMFVGDSLSLNMWESLSCMIHASVPNAKTSSVDRDSLHSVTFDEYDVTLYMFRTPYLVD 179
Query: 175 IVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMD 234
IV++ VGRVL L+SI+ G WK MD+LIFNSWHWWTHTG++QP WDY++ G +L KDMD
Sbjct: 180 IVRESVGRVLRLDSIEGGNAWKGMDLLIFNSWHWWTHTGRSQP--WDYVRAGASLYKDMD 237
Query: 235 RLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGST 294
RLEAFY+GMSTWA+WVD NVDP++TKVFFQGISPTHY G+EWN KK+C GE EPLSGST
Sbjct: 238 RLEAFYRGMSTWAKWVDQNVDPAKTKVFFQGISPTHYEGREWNQPKKSCNGEAEPLSGST 297
Query: 295 YPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGL 354
YPGGAPPA +VVNKVLS+I KPVYLLDITTLSQLRKDAHPSTY G SGTDCSHWCLPGL
Sbjct: 298 YPGGAPPAVAVVNKVLSTIKKPVYLLDITTLSQLRKDAHPSTY-GDGSGTDCSHWCLPGL 356
Query: 355 PDTWNQLLYAALTM 368
PDTWNQLLYAAL M
Sbjct: 357 PDTWNQLLYAALVM 370
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224114702|ref|XP_002316834.1| predicted protein [Populus trichocarpa] gi|222859899|gb|EEE97446.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449462645|ref|XP_004149051.1| PREDICTED: uncharacterized protein LOC101203509 [Cucumis sativus] gi|449509029|ref|XP_004163473.1| PREDICTED: uncharacterized LOC101203509 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356555410|ref|XP_003546025.1| PREDICTED: uncharacterized protein LOC100818476 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357446949|ref|XP_003593750.1| hypothetical protein MTR_2g015720 [Medicago truncatula] gi|355482798|gb|AES64001.1| hypothetical protein MTR_2g015720 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224076992|ref|XP_002305083.1| predicted protein [Populus trichocarpa] gi|222848047|gb|EEE85594.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|388514377|gb|AFK45250.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|356521442|ref|XP_003529365.1| PREDICTED: uncharacterized protein LOC100803167 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297851330|ref|XP_002893546.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] gi|297339388|gb|EFH69805.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18396930|ref|NP_564318.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] gi|18377638|gb|AAL66969.1| unknown protein [Arabidopsis thaliana] gi|20465655|gb|AAM20296.1| unknown protein [Arabidopsis thaliana] gi|110742767|dbj|BAE99289.1| hypothetical protein [Arabidopsis thaliana] gi|332192916|gb|AEE31037.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 368 | ||||||
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.896 | 0.868 | 0.735 | 2.8e-144 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.894 | 0.854 | 0.725 | 2.1e-141 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.880 | 0.882 | 0.636 | 4.6e-121 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.910 | 0.920 | 0.606 | 1.6e-118 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.858 | 0.887 | 0.560 | 4.2e-102 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.877 | 0.899 | 0.521 | 7.1e-100 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.869 | 0.796 | 0.504 | 1.6e-88 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.796 | 0.736 | 0.459 | 4.3e-70 | |
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.866 | 0.841 | 0.408 | 2.1e-68 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.872 | 0.675 | 0.390 | 2e-65 |
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
Identities = 247/336 (73%), Positives = 293/336 (87%)
Query: 36 TSLRGRKQ--VSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQ 93
+SLRG+KQ SGCNLFQGRWV D SYP YDSS CPFID EFDCLK+GRPDKQ+LKYSWQ
Sbjct: 48 SSLRGKKQRRASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQ 107
Query: 94 PASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLS 153
P SC +PRFDGG FLR+YRGKR+MFVGDSLSLNMWESL+CMIHASVPNAKT+F+++ LS
Sbjct: 108 PESCTIPRFDGGAFLRKYRGKRVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLS 167
Query: 154 SVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGK-FWKDMDVLIFNSWHWWTHT 212
+++F+EYGVTL LYRTPY+VDI K++VGRVL L +I+ G WK+MDVL+FNSWHWWTH
Sbjct: 168 TLTFQEYGVTLYLYRTPYIVDISKERVGRVLNLGAIEGGADAWKNMDVLVFNSWHWWTHK 227
Query: 213 GKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYT 272
G++Q WDYI+DG +L++DM+RL+AFYKG+STWARWVD NVD ++T+VFFQGISPTHY
Sbjct: 228 GQSQG--WDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHYE 285
Query: 273 GKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDA 332
G+EWN +K C G+++PL GS+YP G PP++ VV+KVLSS+ KPV LLDITTLSQLRKDA
Sbjct: 286 GREWNEPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLSQLRKDA 345
Query: 333 HPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM 368
HPS+Y G GTDCSHWCLPGLPDTWNQLLYAALTM
Sbjct: 346 HPSSYGGD-GGTDCSHWCLPGLPDTWNQLLYAALTM 380
|
|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 368 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-144 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-104 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 1e-25 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 412 bits (1060), Expect = e-144
Identities = 186/337 (55%), Positives = 223/337 (66%), Gaps = 17/337 (5%)
Query: 45 SGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFD 103
S C LF G WV D SYPLY SS CP ID EF+C YGRPD YLKY WQP +C +PRF+
Sbjct: 51 STCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFN 110
Query: 104 GGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVT 163
G +FL + +GK +MFVGDSL N WESL C+I +SVP+ +T R + LS+ F +YGV+
Sbjct: 111 GLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVS 170
Query: 164 LLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMDVLIFNSWHWWTHTGKAQPRRWDY 222
+ Y+ PYLVDI + RVL L I W+D DVLIFN+ HWW+H G Q WDY
Sbjct: 171 ISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQG--WDY 228
Query: 223 IQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWN----S 278
I+ G T +DMDRL A K + TWA WVD NVD S+T+VFFQ ISPTHY EW+ +
Sbjct: 229 IESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAST 288
Query: 279 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYS 338
KNC GE P+SG TYPG P VV++V+ ++ P YLLDIT LS+LRKD HPS YS
Sbjct: 289 TTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYS 348
Query: 339 GKHSGT---------DCSHWCLPGLPDTWNQLLYAAL 366
G S + DCSHWCLPGLPDTWNQL Y AL
Sbjct: 349 GDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL 385
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 368 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.94 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.53 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 95.6 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 94.8 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 87.36 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 85.19 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-116 Score=863.23 Aligned_cols=325 Identities=57% Similarity=1.103 Sum_probs=300.5
Q ss_pred CCCCCCcCcccceeeCCCCCCCCCCCCC-CCccccccccCCCCCcccccceeecCCCCCCCCChHHHHHHhcCCeEEEEe
Q 017652 42 KQVSGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVG 120 (368)
Q Consensus 42 ~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpD~~y~~wrWqP~~C~LprFd~~~fL~~lRgK~i~FVG 120 (368)
...+.||+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||||||.+||++||||+|||||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG 127 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG 127 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence 4457899999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHhhhhccCCCCceeeeecCceeEEEEeecCeEEEEEecccceecccccccceEEeccccc-CCCCCCcc
Q 017652 121 DSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMD 199 (368)
Q Consensus 121 DSl~Rnq~~SL~ClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~i~~-~~~~~~~D 199 (368)
|||+|||||||+|||++++|...+....+++..+|+|++||+||+||||||||+.+.....++|+||+++. ++.|+++|
T Consensus 128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~D 207 (387)
T PLN02629 128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDAD 207 (387)
T ss_pred cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCC
Confidence 99999999999999999988765445556778999999999999999999999987666567899999987 78999999
Q ss_pred EEEEeccccccccCCCCCCcccccccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCcC
Q 017652 200 VLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSR 279 (368)
Q Consensus 200 vlV~ntG~Ww~~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~l~~~~~~Vf~Rt~sP~Hf~~g~W~~~ 279 (368)
||||||||||.+++..++ ++|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+||+||+||..
T Consensus 208 vlVfntghWw~~~~~~~~--~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~g 285 (387)
T PLN02629 208 VLIFNTGHWWSHQGSLQG--WDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAG 285 (387)
T ss_pred EEEEeCccccCCCCeeEE--eeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCC
Confidence 999999999999988888 899999999899999999999999999999999999889999999999999999999942
Q ss_pred ----CCCCCCCcccCCCCCCCCCCchHHHHHHHHHhcCCCCeeEeeccccccccccCCCCCCCCC---------CCCCCc
Q 017652 280 ----KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGK---------HSGTDC 346 (368)
Q Consensus 280 ----gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDIt~ls~~R~DaHp~~y~~~---------~~~~DC 346 (368)
+|+|+++|+|+.++++.++...+++++++++++++.+|++||||+||++|||||||+|++. ..++||
T Consensus 286 g~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC 365 (387)
T PLN02629 286 ASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADC 365 (387)
T ss_pred CCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCc
Confidence 2579999999998877777777888999999999999999999999999999999999642 346899
Q ss_pred ccccCCCchhHHHHHHHHHHhC
Q 017652 347 SHWCLPGLPDTWNQLLYAALTM 368 (368)
Q Consensus 347 ~HWClPGv~D~WN~lL~~~L~~ 368 (368)
+||||||||||||||||++|+.
T Consensus 366 ~HWCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 366 SHWCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred ccccCCCCCccHHHHHHHHHhC
Confidence 9999999999999999999974
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 368 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.68 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0016 Score=56.88 Aligned_cols=109 Identities=14% Similarity=0.136 Sum_probs=63.2
Q ss_pred CccEEEEeccccccccCCCCCCcccccccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCcc
Q 017652 197 DMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEW 276 (368)
Q Consensus 197 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~l~~~~~~Vf~Rt~sP~Hf~~g~W 276 (368)
.+|+|||+.|..=.. .-.+.|+..|+++.+-+.+.. ++++|+|-+..|..... +
T Consensus 74 ~pd~Vvi~~G~ND~~----------------------~~~~~~~~~l~~ii~~l~~~~--p~~~ii~~~~~P~~~~~--~ 127 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD----------------------YTEEEYDKSFPKLIKIIRKYA--PKAKLIWANTTPVRTGE--G 127 (200)
T ss_dssp CCSEEEECCCSSCTT----------------------SCHHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCEESG--G
T ss_pred CCCeEEEEeeeCCCC----------------------CCHHHHHHHHHHHHHHHhhhC--CCccEEEeccCCCcccc--c
Confidence 469999999975210 014568888888877765532 46789999998865421 1
Q ss_pred CcCCCCCCCCcccCCCCCCCCCCchHHHHHHHHHhcCCCCeeEeeccccccccccCCCCCCCCCCCCCCcccccCCC
Q 017652 277 NSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPG 353 (368)
Q Consensus 277 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDIt~ls~~R~DaHp~~y~~~~~~~DC~HWClPG 353 (368)
. ....+ ........+++++++.++ ..+.++|+...+.-+++. + ...|-+|.---|
T Consensus 128 ~----~~~~~--------~~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~~~~~~----~----~~~Dg~Hpn~~G 182 (200)
T 4h08_A 128 M----KEFAP--------ITERLNVRNQIALKHINR--ASIEVNDLWKVVIDHPEY----Y----AGGDGTHPIDAG 182 (200)
T ss_dssp G----CEECT--------HHHHHHHHHHHHHHHHHH--TTCEEECHHHHHTTCGGG----T----TTSCSSSCCHHH
T ss_pred c----cccch--------hHHHHHHHHHHHHHHhhh--cceEEEecHHhHhcCHHH----h----cCCCCCCCCHHH
Confidence 1 00000 000012345666776665 469999998766533322 1 135777765544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 368 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 97.02 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.41 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 84.59 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.02 E-value=0.0005 Score=57.56 Aligned_cols=15 Identities=33% Similarity=0.448 Sum_probs=12.6
Q ss_pred hcCCeEEEEechhhH
Q 017652 111 YRGKRIMFVGDSLSL 125 (368)
Q Consensus 111 lRgK~i~FVGDSl~R 125 (368)
+..|||+|+|||++-
T Consensus 2 ~~~kri~~iGDSit~ 16 (207)
T d3dc7a1 2 VSFKRPAWLGDSITA 16 (207)
T ss_dssp BCCSSEEEEESTTTS
T ss_pred CCCCEEEEEehHhhc
Confidence 346899999999984
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|