Citrus Sinensis ID: 017689

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------
MESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAESDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS
ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccccccHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccHHHHHHHccccEEEEccccccccccccccccccccHHHccccHHHHHHHccccccEEEEEEcccc
cccccccccccccccccHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHcccHHHccccccEEEEEcccccccEcHHHccHHHHHHHHcccEEEEEccccHEHHcccccEcHHHEEEEEEccHHHHHHHcccEEEEEEEEccccc
meseselvpfpllptpietnyractipyrfptdnpkkptrtEIAWLDLFLNSipsfkkraesdptvpdaHVRAEKFAQRYSEILEDmkkdpethggppdcILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLAScqnlvprpwviddleTFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAandlpsindvtyPELIEIMSKLKDekgqlmgvdtsklliansgndlpviDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQfkcdslkigmvkhpevaqflggrlYDCVFKYNEVSS
meseselvpfpllptpietnyrACTIPyrfptdnpkkpTRTEIAWLDLFLNSIPSFkkraesdptvpdahvRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRdifkkvkdeenakaislfgdvvrlndVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVilaandlpsindvTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS
MESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAESDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFkvkwskkawkkavIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS
*******VPFPLLPTPIETNYRACTIPYRFPTD*****TRTEIAWLDLFLNSIP********************************************DCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYN****
****SELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAES*****D***RAEKFAQRYSEILEDMKKDPE*HGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEV**
MESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKK**********AHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS
******LVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAESDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNE***
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MESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAESDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query367 2.2.26 [Sep-21-2011]
Q949P3367 Uncharacterized protein A no no 1.0 1.0 0.839 0.0
Q5R5F8773 Pantothenate kinase 4 OS= yes no 0.861 0.408 0.383 2e-54
Q9NVE7773 Pantothenate kinase 4 OS= yes no 0.861 0.408 0.383 2e-54
Q4R4U1773 Pantothenate kinase 4 OS= N/A no 0.861 0.408 0.383 1e-53
Q923S8773 Pantothenate kinase 4 OS= yes no 0.861 0.408 0.380 4e-53
Q8L5Y9901 Pantothenate kinase 2 OS= no no 0.937 0.381 0.366 4e-51
Q80YV4820 Pantothenate kinase 4 OS= no no 0.861 0.385 0.337 2e-47
>sp|Q949P3|Y2734_ARATH Uncharacterized protein At2g17340 OS=Arabidopsis thaliana GN=At2g17340 PE=1 SV=1 Back     alignment and function desciption
 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/367 (83%), Positives = 339/367 (92%)

Query: 1   MESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRA 60
           MES+SE+VPFP LP PIE NYRACTIPYRFP+D+PKK T  EI+W+++F NSIPSFKKRA
Sbjct: 1   MESDSEMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRA 60

Query: 61  ESDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIF 120
           ESD TVPDA  RAEKFA+RY+ ILED+KKDPE+HGGPPD ILLCRLREQVLRELGFRDIF
Sbjct: 61  ESDITVPDAPARAEKFAERYAGILEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDIF 120

Query: 121 KKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDG 180
           KKVKDEENAKAISLF  VV L+D IED+GKR+E+L+RGIFAGNIFDLGSAQLAEVFS+DG
Sbjct: 121 KKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIFDLGSAQLAEVFSRDG 180

Query: 181 MSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRR 240
           MSFLASCQNLVPRPWVIDDLE F+ KW  K+WKKAVIFVDNSGADIILGILPFARELLRR
Sbjct: 181 MSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRR 240

Query: 241 GTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTA 300
           G QV+LAAN+LPSIND+T  EL EI+S+LKDE GQL+GVDTSKLLIANSGNDLPVIDL+ 
Sbjct: 241 GAQVVLAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSR 300

Query: 301 VSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVF 360
           VSQELAYL+SDADLVI+EGMGRGIETNLYAQFKCDSLKIGMVKH EVA+FLGGRLYDCVF
Sbjct: 301 VSQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVF 360

Query: 361 KYNEVSS 367
           K+NEV S
Sbjct: 361 KFNEVQS 367

Arabidopsis thaliana (taxid: 3702)
>sp|Q5R5F8|PANK4_PONAB Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1 Back     alignment and function description
>sp|Q9NVE7|PANK4_HUMAN Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1 Back     alignment and function description
>sp|Q4R4U1|PANK4_MACFA Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2 Back     alignment and function description
>sp|Q923S8|PANK4_RAT Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1 Back     alignment and function description
>sp|Q8L5Y9|PANK2_ARATH Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=2 Back     alignment and function description
>sp|Q80YV4|PANK4_MOUSE Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query367
225428330367 PREDICTED: uncharacterized protein At2g1 1.0 1.0 0.874 0.0
363806824367 uncharacterized protein LOC100804454 [Gl 1.0 1.0 0.869 0.0
297836456367 hypothetical protein ARALYDRAFT_480618 [ 1.0 1.0 0.858 0.0
297798382367 hypothetical protein ARALYDRAFT_491111 [ 1.0 1.0 0.852 0.0
21554145367 unknown [Arabidopsis thaliana] 0.994 0.994 0.854 0.0
18418688367 uncharacterized protein [Arabidopsis tha 0.994 0.994 0.852 0.0
255546706367 pantothenate kinase, putative [Ricinus c 1.0 1.0 0.882 0.0
449454313367 PREDICTED: uncharacterized protein At2g1 1.0 1.0 0.858 0.0
21554574367 unknown [Arabidopsis thaliana] 1.0 1.0 0.836 0.0
224102773367 predicted protein [Populus trichocarpa] 1.0 1.0 0.880 0.0
>gi|225428330|ref|XP_002283109.1| PREDICTED: uncharacterized protein At2g17340 [Vitis vinifera] gi|297744464|emb|CBI37726.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/367 (87%), Positives = 349/367 (95%)

Query: 1   MESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRA 60
           MES SELV FPLL TPIE+NYRACTIPYRFP+DNP+K T TE++W+DLFLNSIPSF+KRA
Sbjct: 1   MESSSELVAFPLLLTPIESNYRACTIPYRFPSDNPRKATPTELSWIDLFLNSIPSFRKRA 60

Query: 61  ESDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIF 120
           ESD TV DA+V+AEKFAQRYSEILED+KKDPE+HGGPPDC+LLCRLREQVLRELGFRDIF
Sbjct: 61  ESDGTVADANVKAEKFAQRYSEILEDLKKDPESHGGPPDCVLLCRLREQVLRELGFRDIF 120

Query: 121 KKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDG 180
           KKVKDEENAKAISLF +VV LND IEDE KR+E+L+RGIFAGNIFDLGSAQLAEVFSKDG
Sbjct: 121 KKVKDEENAKAISLFENVVHLNDAIEDESKRLENLVRGIFAGNIFDLGSAQLAEVFSKDG 180

Query: 181 MSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRR 240
           MSFLASCQNLVPRPWVIDDL++FK+KWS+K+WKK +IFVDNSGADIILGILPFARELLR 
Sbjct: 181 MSFLASCQNLVPRPWVIDDLDSFKLKWSRKSWKKVIIFVDNSGADIILGILPFARELLRC 240

Query: 241 GTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTA 300
           G+QV+LAANDLPSINDVTYPELIEI++KLKDE GQL+GVDTS LLIANSGNDLPVIDLT 
Sbjct: 241 GSQVVLAANDLPSINDVTYPELIEIIAKLKDENGQLVGVDTSNLLIANSGNDLPVIDLTR 300

Query: 301 VSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVF 360
           +SQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKH EVAQFLGGRLYDCVF
Sbjct: 301 ISQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAQFLGGRLYDCVF 360

Query: 361 KYNEVSS 367
           KYNEV S
Sbjct: 361 KYNEVLS 367

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|363806824|ref|NP_001242288.1| uncharacterized protein LOC100804454 [Glycine max] gi|255641170|gb|ACU20862.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|297836456|ref|XP_002886110.1| hypothetical protein ARALYDRAFT_480618 [Arabidopsis lyrata subsp. lyrata] gi|297331950|gb|EFH62369.1| hypothetical protein ARALYDRAFT_480618 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297798382|ref|XP_002867075.1| hypothetical protein ARALYDRAFT_491111 [Arabidopsis lyrata subsp. lyrata] gi|297312911|gb|EFH43334.1| hypothetical protein ARALYDRAFT_491111 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21554145|gb|AAM63225.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18418688|ref|NP_567984.1| uncharacterized protein [Arabidopsis thaliana] gi|17063179|gb|AAL32984.1| unknown protein [Arabidopsis thaliana] gi|23506025|gb|AAN28872.1| At4g35360/F23E12_80 [Arabidopsis thaliana] gi|332661103|gb|AEE86503.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255546706|ref|XP_002514412.1| pantothenate kinase, putative [Ricinus communis] gi|223546509|gb|EEF48008.1| pantothenate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449454313|ref|XP_004144900.1| PREDICTED: uncharacterized protein At2g17340-like [Cucumis sativus] gi|449471318|ref|XP_004153274.1| PREDICTED: uncharacterized protein At2g17340-like [Cucumis sativus] gi|449500143|ref|XP_004161016.1| PREDICTED: uncharacterized protein At2g17340-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|21554574|gb|AAM63619.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224102773|ref|XP_002312796.1| predicted protein [Populus trichocarpa] gi|222849204|gb|EEE86751.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query367
TAIR|locus:2122123367 AT4G35360 "AT4G35360" [Arabido 0.994 0.994 0.830 1.5e-161
TAIR|locus:2827544367 AT2G17340 "AT2G17340" [Arabido 1.0 1.0 0.817 3.2e-159
TAIR|locus:2827582361 AT2G17320 "AT2G17320" [Arabido 0.983 1.0 0.775 1.9e-147
UNIPROTKB|E2QXZ0773 PANK4 "Uncharacterized protein 0.948 0.450 0.365 1.3e-52
UNIPROTKB|I3LPY8780 PANK4 "Uncharacterized protein 0.948 0.446 0.359 4.8e-52
UNIPROTKB|E9PHT6734 PANK4 "Pantothenate kinase 4" 0.861 0.430 0.377 5.6e-52
UNIPROTKB|Q9NVE7773 PANK4 "Pantothenate kinase 4" 0.861 0.408 0.377 7.1e-52
UNIPROTKB|F1MLD0773 PANK4 "Uncharacterized protein 0.948 0.450 0.357 3.7e-51
TAIR|locus:2116490901 PANK2 "pantothenate kinase 2" 0.602 0.245 0.359 1.4e-50
UNIPROTKB|E1BV98771 PANK4 "Uncharacterized protein 0.948 0.451 0.367 2.3e-50
TAIR|locus:2122123 AT4G35360 "AT4G35360" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1573 (558.8 bits), Expect = 1.5e-161, P = 1.5e-161
 Identities = 303/365 (83%), Positives = 329/365 (90%)

Query:     1 MESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRA 60
             MES+SE+V  PLLPTPIE+NYRACTIPYRFP+DNP+K T TEI+W+DLF NSIPSFK+RA
Sbjct:     1 MESDSEMVALPLLPTPIESNYRACTIPYRFPSDNPRKATPTEISWIDLFSNSIPSFKERA 60

Query:    61 ESDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIF 120
             ESD TVPDA VRAEKFA+RY+EILED+KKDPE+HGGPPDCILLCR+RE +LRELGFRDIF
Sbjct:    61 ESDTTVPDAPVRAEKFAKRYAEILEDLKKDPESHGGPPDCILLCRIRELILRELGFRDIF 120

Query:   121 KKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDG 180
             KKVKDEENAKAISLF +VVRL+D I DEGKR+E+L+RGIFAGNIFDLGSAQLAEVFSKDG
Sbjct:   121 KKVKDEENAKAISLFPEVVRLSDAINDEGKRIENLVRGIFAGNIFDLGSAQLAEVFSKDG 180

Query:   181 MSFLASCQNLVPRPWVIDDLETFXXXXXXXXXXXXXIFVDNSGADIILGILPFARELLRR 240
             MSFLASCQNLV RPWVIDDL+ F             IFVDNSGADIILGILPFARE+LR 
Sbjct:   181 MSFLASCQNLVSRPWVIDDLDNFQARWLKKPWKKAVIFVDNSGADIILGILPFAREMLRL 240

Query:   241 GTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTA 300
             G QV+LAAN+LPSINDVTY EL EI+SKL DE GQLMGVDTS LLIANSGNDLPVIDL  
Sbjct:   241 GMQVVLAANELPSINDVTYIELAEILSKLNDENGQLMGVDTSNLLIANSGNDLPVIDLAR 300

Query:   301 VSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVF 360
             VSQE+AYL+SDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCV 
Sbjct:   301 VSQEVAYLSSDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVI 360

Query:   361 KYNEV 365
             KYNEV
Sbjct:   361 KYNEV 365
GO:0004594 "pantothenate kinase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
TAIR|locus:2827544 AT2G17340 "AT2G17340" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827582 AT2G17320 "AT2G17320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXZ0 PANK4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LPY8 PANK4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E9PHT6 PANK4 "Pantothenate kinase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NVE7 PANK4 "Pantothenate kinase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MLD0 PANK4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2116490 PANK2 "pantothenate kinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1BV98 PANK4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q949P3Y2734_ARATHNo assigned EC number0.83921.01.0nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00036290001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (367 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00027960001
SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (233 aa)
      • 0.542
GSVIVG00021938001
SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (174 aa)
      • 0.520

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query367
pfam01937315 pfam01937, DUF89, Protein of unknown function DUF8 3e-76
PLN02902876 PLN02902, PLN02902, pantothenate kinase 4e-73
COG1578285 COG1578, COG1578, Uncharacterized conserved protei 4e-07
>gnl|CDD|216798 pfam01937, DUF89, Protein of unknown function DUF89 Back     alignment and domain information 
 Score =  237 bits (607), Expect = 3e-76
 Identities = 83/320 (25%), Positives = 137/320 (42%), Gaps = 15/320 (4%)

Query: 49  FLNSIPSFKKRAESD-PTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLR 107
               +P    +   D     DA    +K     SE+  +++ DP      P     C L 
Sbjct: 2   APERLPCILTQVIDDLELATDAEEELKKIIGELSELKAELQTDPPLPPLAPWLFAECYLY 61

Query: 108 EQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDL 167
            ++L   G  D FK+ K+  N KA++   ++    + +EDE +  + L++    GNI DL
Sbjct: 62  RRLLEAFGNYDPFKEQKELSNEKALAAVPELAERLEELEDEEELFKELLKISLWGNIIDL 121

Query: 168 GSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADII 227
           G     E   +D     +  +  + RP ++DD +    +      K+    +DN+G +++
Sbjct: 122 GLLAG-EDSQED---QESELRKALERPILVDDTDALWERLKGSRAKRVDYVLDNAGFELV 177

Query: 228 LGILPFARELLR--RGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTS--- 282
             +L  A ELLR    T+V+L    +P +NDVT  +   ++ +L D      G+D     
Sbjct: 178 FDLL-LAEELLRSGLATKVVLHVKGIPFVNDVTMEDAEWLLEQLADHSALGAGLDELLKL 236

Query: 283 -KLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMG--RGIETNLYAQFKCDSLKI 339
            KL+ + S    P ID   +S EL    S ADLVI +G    R +  +         L +
Sbjct: 237 GKLIDSGSDFWTPGIDFWEMSPELYEELSKADLVIFKGDLNYRKLTGDRDWPPTTPILAL 296

Query: 340 GMVKHPEVAQFLGGRLYDCV 359
              K   VA  L G L + +
Sbjct: 297 RTAKCDVVAGLLVG-LGEKL 315

This family has no known function. Length = 315
>gnl|CDD|215489 PLN02902, PLN02902, pantothenate kinase Back     alignment and domain information
>gnl|CDD|224494 COG1578, COG1578, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 367
PLN02902876 pantothenate kinase 100.0
KOG4584348 consensus Uncharacterized conserved protein [Gener 100.0
COG1578285 Uncharacterized conserved protein [Function unknow 100.0
PF01937355 DUF89: Protein of unknown function DUF89; InterPro 100.0
KOG3870434 consensus Uncharacterized conserved protein [Funct 100.0
>PLN02902 pantothenate kinase Back     alignment and domain information 
Probab=100.00  E-value=1e-83  Score=677.60  Aligned_cols=351  Identities=40%  Similarity=0.684  Sum_probs=320.8

Q ss_pred             CCCCcCCCCCCCCCCCCCCCCcccCCCCCCCCCCCccccccccccccccHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHH
Q 017689            4 ESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAESD-PTVPDAHVRAEKFAQRYSE   82 (367)
Q Consensus         4 ~~~~~~~p~l~~~~~~~y~p~~~~~~~~~~~~~~~~~~~~~wm~~~~~ci~c~~~~a~~~-~~~~~~~~~~~~~~~~~~~   82 (367)
                      .+++++||||.||.  +|.|||+||.  +.++|.      ||++||.+++|.|+++|... ..++|+.+|+++|+++|.+
T Consensus       494 ~~~l~~~pLL~~~~--~Y~p~t~d~~--d~~~r~------yW~~~f~~~i~~~~~~A~~sq~~~~da~~ra~~F~~~y~~  563 (876)
T PLN02902        494 VPTLEVFPLLADPK--TYEPNTIDLS--DQSERE------YWFKVLSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSA  563 (876)
T ss_pred             ccccccccccCCCC--CCCCCcccCC--ccHHHH------HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence            46799999999998  9999999994  222554      99999999999999999754 5778999999999999999


Q ss_pred             HHHHhhcCCCCCCCchHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhh
Q 017689           83 ILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAG  162 (367)
Q Consensus        83 ~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~DPy~~~K~~~n~~Al~~~~~l~~~ld~~~~~~~~l~~~l~~alaG  162 (367)
                      +|.+++++|.+||+++ ++.+.++++.+++.+|+.|||+++|+++|+.|++++|.+++++++++ .+++|.+++|++++|
T Consensus       564 ~L~~l~~~p~a~G~~~-~~~Ll~~rE~~Lre~Gf~DPY~~vK~~eN~~AL~llp~l~~~ld~~~-~edrL~~aVk~aiAG  641 (876)
T PLN02902        564 HLARLMEEPAAYGKLG-LANLLELREECLREFHFVDAYRSIKQRENEASLAVLPDLLAELDSMT-EETRLLTLIEGVLAA  641 (876)
T ss_pred             HHHHHHhCccccCCch-HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHH
Confidence            9999999999999987 58999999999999999999999999999999999999999998766 468999999999999


Q ss_pred             hhhcccchhhhhhhccc-CCCHHHHHhhhCCCCcccCCHHHHHHHhcc------CCCCeEEEEecCCChhhhhchHHHHH
Q 017689          163 NIFDLGSAQLAEVFSKD-GMSFLASCQNLVPRPWVIDDLETFKVKWSK------KAWKKAVIFVDNSGADIILGILPFAR  235 (367)
Q Consensus       163 N~~D~g~~~~~~~~~~~-~~~~~~~l~~~~~~~~~vdd~~~~~~~L~~------~~~~~il~~~DNaGeeiv~D~lpLa~  235 (367)
                      |+||||+++.+++++.+ .+++++.+++++++||.+||++.|+++|.+      .++|+++||+||||+|||||++||||
T Consensus       642 NifD~Ga~~~v~l~~~~~~~~~~~~~~~~~~rpw~iDD~d~f~erL~~~~~~~~~~~KkvLyf~DNAGaEIVLD~LpLiR  721 (876)
T PLN02902        642 NIFDWGSRACVELYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKERMLGSGGKKPKPHKRALLFVDNSGADVVLGMLPLAR  721 (876)
T ss_pred             hhhhhhhhhhhhhccccchhhHHHHHHHhhcCCCccCCHHHHHHHHhhcccccCCCccEEEEEecCCCCceecChHHHHH
Confidence            99999998777666544 357888899999999999999999999974      36899999999999779999999999


Q ss_pred             HHHhCCCEEEEEecCCcceecCChHHHHHHHHHHhhhhhhhc-----c---------ccc--------cceEecccCCCc
Q 017689          236 ELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLM-----G---------VDT--------SKLLIANSGNDL  293 (367)
Q Consensus       236 ~L~~~g~~V~l~vk~~P~lNDvT~~D~~~~l~~~~~~d~~l~-----g---------l~~--------~~~~vi~sG~~~  293 (367)
                      +|+++|++|+++||+.|+|||||++|+..+++.++..|+.+.     |         +++        ++++|++||+.+
T Consensus       722 ELl~rgtkV~lavng~PiINDvT~eDl~~~~~~~a~~~~~l~~A~~aG~~~~~~~~~ld~~~~~~~~~~~l~VV~SG~~s  801 (876)
T PLN02902        722 ELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMVNTDDGSKDDSTSVPLMVVENGCGS  801 (876)
T ss_pred             HHHHcCCEEEEEECCCCchhhhhHHHHHHHHHHHhhcccHHHHHHHhcccccccccccccccccccccceEEEEcCCCCC
Confidence            999999999999999999999999999999999887765542     2         332        468999999999


Q ss_pred             cCcccccccHHHHHHhccCcEEEEecCCCCCCcccccccccccccccccCCHHHHHHh-CCCcCCeEEEeccCC
Q 017689          294 PVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFL-GGRLYDCVFKYNEVS  366 (367)
Q Consensus       294 pg~~l~~~s~el~~~l~~aDLII~KGmgNye~~~i~~~f~c~~lkl~~~Kc~~vA~~l-g~~~~~~V~~~~~~~  366 (367)
                      ||++|+++|+||++++++|||||+|||||.+|||+++.|+||+|||||||++|+|++| ||++|||||+|+++.
T Consensus       802 PGidL~rvS~E~~~a~~~ADLIIaKGMGRaihTN~~a~f~cd~LklamiK~~~lA~~L~gG~~ydcV~k~e~~~  875 (876)
T PLN02902        802 PCIDLRQVSSELAAAAKDADLIVLEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLINGNIYDCVCRYEPAS  875 (876)
T ss_pred             CCcChHHCCHHHHHHhcCCCEEEEcCcccccccccccceecchhHHhHhccHHHHhhccCCceEEEEEecccCC
Confidence            9999999999999999999999999999999999999999999999999999999999 999999999999875

>KOG4584 consensus Uncharacterized conserved protein [General function prediction only] Back     alignment and domain information
>COG1578 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01937 DUF89: Protein of unknown function DUF89; InterPro: IPR002791 This entry contains uncharacterised proteins Back     alignment and domain information
>KOG3870 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query367
1xfi_A367 X-Ray Structure Of Gene Product From Arabidopsis Th 1e-176
>pdb|1XFI|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At2g17340 Length = 367 Back     alignment and structure 
Iteration: 1

 Score =  615 bits (1586), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 299/366 (81%), Positives = 328/366 (89%)
Query: 2   ESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAE 61
           ES+SE+VPFP LP PIE NYRACTIPYRFP+D+PKK T  EI+W+++F NSIPSFKKRAE
Sbjct: 2   ESDSEMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAE 61
Query: 62  SDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFK 121
           SD TVPDA  RAEKFA+RY+ ILED+KKDPE+HGGPPD ILLCRLREQVLRELGFRDIFK
Sbjct: 62  SDITVPDAPARAEKFAERYAGILEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFK 121
Query: 122 KVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGM 181
           KVKDEENAKAISLF  VV L+D IED+GKR+E+L+RGIFAGNIFDLGSAQLAEVFS+DGM
Sbjct: 122 KVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIFDLGSAQLAEVFSRDGM 181
Query: 182 SFLASCQNLVPRPWVIDDLETFXXXXXXXXXXXXXIFVDNSGADIILGILPFARELLRRG 241
           SFLASCQNLVPRPWVIDDLE F             IFVDNSGADIILGILPFARELLRRG
Sbjct: 182 SFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRG 241
Query: 242 TQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAV 301
            QV+LAAN+LPSIND+T  EL EI+S+LKDE GQL+GVDTSKLLIANSGNDLPVIDL+ V
Sbjct: 242 AQVVLAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRV 301
Query: 302 SQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFK 361
           SQELAYL+SDADLVI+EGMGRGIETNLYAQFKCDSLKIGMVKH EVA+FLGGRLYDCVFK
Sbjct: 302 SQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFK 361
Query: 362 YNEVSS 367
           +NEV S
Sbjct: 362 FNEVQS 367

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query367
1xfi_A367 Unknown protein; structural genomics, protein stru 1e-146
2ffj_A300 Conserved hypothetical protein; structural genomic 7e-60
2g8l_A299 287AA long hypothetical protein; structural genomi 2e-59
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A Length = 367 Back     alignment and structure
 Score =  416 bits (1070), Expect = e-146
 Identities = 307/366 (83%), Positives = 338/366 (92%)

Query: 2   ESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAE 61
           ES+SE+VPFP LP PIE NYRACTIPYRFP+D+PKK T  EI+W+++F NSIPSFKKRAE
Sbjct: 2   ESDSEMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAE 61

Query: 62  SDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFK 121
           SD TVPDA  RAEKFA+RY+ ILED+KKDPE+HGGPPD ILLCRLREQVLRELGFRDIFK
Sbjct: 62  SDITVPDAPARAEKFAERYAGILEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFK 121

Query: 122 KVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGM 181
           KVKDEENAKAISLF  VV L+D IED+GKR+E+L+RGIFAGNIFDLGSAQLAEVFS+DGM
Sbjct: 122 KVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIFDLGSAQLAEVFSRDGM 181

Query: 182 SFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRG 241
           SFLASCQNLVPRPWVIDDLE F+ KW  K+WKKAVIFVDNSGADIILGILPFARELLRRG
Sbjct: 182 SFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRG 241

Query: 242 TQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAV 301
            QV+LAAN+LPSIND+T  EL EI+S+LKDE GQL+GVDTSKLLIANSGNDLPVIDL+ V
Sbjct: 242 AQVVLAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRV 301

Query: 302 SQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFK 361
           SQELAYL+SDADLVI+EGMGRGIETNLYAQFKCDSLKIGMVKH EVA+FLGGRLYDCVFK
Sbjct: 302 SQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFK 361

Query: 362 YNEVSS 367
           +NEV S
Sbjct: 362 FNEVQS 367
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1 Length = 300 Back     alignment and structure
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1 Length = 299 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query367
1xfi_A367 Unknown protein; structural genomics, protein stru 100.0
2g8l_A299 287AA long hypothetical protein; structural genomi 100.0
2ffj_A300 Conserved hypothetical protein; structural genomic 100.0
3pt1_A471 UPF0364 protein YMR027W; alpha/beta fold, carbohyd 100.0
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A Back     alignment and structure
Probab=100.00  E-value=1.3e-86  Score=658.23  Aligned_cols=365  Identities=84%  Similarity=1.326  Sum_probs=323.9

Q ss_pred             CCCCCCcCCCCCCCCCCCCCCCCcccCCCCCCCCCCCccccccccccccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Q 017689            2 ESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAESDPTVPDAHVRAEKFAQRYS   81 (367)
Q Consensus         2 ~~~~~~~~~p~l~~~~~~~y~p~~~~~~~~~~~~~~~~~~~~~wm~~~~~ci~c~~~~a~~~~~~~~~~~~~~~~~~~~~   81 (367)
                      +|++++++||||.||++.+|.|||+||.|+++..+.+++++.||++||.++++.|.++|...+..+++.+|+++|+++|.
T Consensus         2 ~~~~~~~~~pll~~~~~~~y~p~t~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~a~~~~~~~~a~~ra~~f~~~~~   81 (367)
T 1xfi_A            2 ESDSEMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDITVPDAPARAEKFAERYA   81 (367)
T ss_dssp             ----CCBCCTTSCSCCTTTCCSBCSCCCCTTSCTTSCCHHHHHHHHHHHTTHHHHHHHHHTCTTSTTHHHHHHHHHHHHH
T ss_pred             CCccccccCcccCCccccCCCCCccCCCCCcccccccHHHHHHHHHHHHHhhHHHHHHhccCCCCccHHHHHHHHHHHHH
Confidence            67889999999999944499999999999999988989999999999999999999999877888899999999999999


Q ss_pred             HHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHh
Q 017689           82 EILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFA  161 (367)
Q Consensus        82 ~~l~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~DPy~~~K~~~n~~Al~~~~~l~~~ld~~~~~~~~l~~~l~~ala  161 (367)
                      ++|..|.++|.+||.|+.+++++++++++++.+|+.|||+++|+++|+.|+++++.+.+.+++++...++|.+++|+++|
T Consensus        82 ~~l~~l~~~p~~~g~~~~~r~~~~~~~~il~~~g~~DPf~~~K~~~n~~al~~l~~l~~~l~~~~~~~~~l~~llr~al~  161 (367)
T 1xfi_A           82 GILEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFA  161 (367)
T ss_dssp             HHHHHHHHCTTGGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhCccccCCcchHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence            99999999999999964468999999999999999999999999999999999999999888776566899999999999


Q ss_pred             hhhhcccchhhhhhhcccCCCHHHHHhhhCCCCcccCCHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHHHHHhCC
Q 017689          162 GNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRG  241 (367)
Q Consensus       162 GN~~D~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~vdd~~~~~~~L~~~~~~~il~~~DNaGeeiv~D~lpLa~~L~~~g  241 (367)
                      ||++|||+..+.+.|+++++++++.++++.+++|++||++.|+++|.+.++++|+||+||||+|||||++|||++|+++|
T Consensus       162 GN~~Dlg~~~~~~~~~~~~~~~~~~~~~~~~~~~lvdd~~~l~~~L~~~~~k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g  241 (367)
T 1xfi_A          162 GNIFDLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRG  241 (367)
T ss_dssp             HHHC---------------CCHHHHTTCSCCSSCSEECHHHHHHHHTTTCCCEEEEECCBTTHHHHHTHHHHHHHHHHTT
T ss_pred             HhccccccccccccccccCCCHHHHHHHhhccCCCcCCHHHHHHHhcccCCCEEEEEecCCCchhhccHHHHHHHHHHcC
Confidence            99999999876655654457889999998899999999999999998755789999999999889999667999999999


Q ss_pred             CEEEEEecCCcceecCChHHHHHHHHHHhhhhhhhccccccceEecccCCCccCcccccccHHHHHHhccCcEEEEecCC
Q 017689          242 TQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMG  321 (367)
Q Consensus       242 ~~V~l~vk~~P~lNDvT~~D~~~~l~~~~~~d~~l~gl~~~~~~vi~sG~~~pg~~l~~~s~el~~~l~~aDLII~KGmg  321 (367)
                      ++|++|||++|+|||||++|+.++|++++..+..++.++++.+.|+++|+++||++|+++|++|++.+++|||||+||||
T Consensus       242 ~kVvl~vK~~P~vnDvT~~D~~~~L~~l~~~~~~L~~l~~g~l~vi~~G~~~~~~~l~~~s~el~~~l~~ADLVI~KG~g  321 (367)
T 1xfi_A          242 AQVVLAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMG  321 (367)
T ss_dssp             CEEEEEEBSSCCTTBCBHHHHHHHHHHHC--CCEETTEECTTEEEEECCCCSSSCCTTSBCHHHHHHHTTCSEEEEESHH
T ss_pred             CEEEEEECCcCceeeCCHHHHHHHHHHHHhcchhhhhhccCcEEEEcCCCCCCCcChHHCCHHHHHHHccCCEEEEECCC
Confidence            99999999999999999999999999987666667788999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccccccccccccccCCHHHHHHhCCCcCCeEEEeccCC
Q 017689          322 RGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVS  366 (367)
Q Consensus       322 Nye~~~i~~~f~c~~lkl~~~Kc~~vA~~lg~~~~~~V~~~~~~~  366 (367)
                      ||.|+|+++.|+|++++|+++||++||++|||++|++||++++++
T Consensus       322 Nyl~t~~~~~f~~~i~~L~~iKc~~vA~~lg~~~~~~V~~~~~~~  366 (367)
T 1xfi_A          322 RGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEVQ  366 (367)
T ss_dssp             HHTTBSTTCCCSSEEEEEEECCCHHHHHHHTCCTTCEEEEEECC-
T ss_pred             CCCccchhhhcCcchhHHHhhCcHHHHHHhCCCcCCEEEEeCCCC
Confidence            999899999999999999999999999999999999999999875
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1 Back     alignment and structure
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1 Back     alignment and structure
>3pt1_A UPF0364 protein YMR027W; alpha/beta fold, carbohydrate phosphatase, F6P binding, HYDR; HET: F6P; 1.77A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 367
d1xfia_360 e.50.1.1 (A:) Hypothetical protein At2g17340 {Thal 1e-165
d2ffja1282 e.50.1.1 (A:7-288) Hypothetical protein AF1104 {Ar 4e-50
d2g8la1284 e.50.1.1 (A:1-284) Hypothetical protein PH1575 {Py 6e-44
>d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 360 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: AF1104-like
superfamily: AF1104-like
family: AF1104-like
domain: Hypothetical protein At2g17340
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  464 bits (1195), Expect = e-165
 Identities = 303/360 (84%), Positives = 333/360 (92%)

Query: 6   ELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAESDPT 65
           E+VPFP LP PIE NYRACTIPYRFP+D+PKK T  EI+W+++F NSIPSFKKRAESD T
Sbjct: 1   EMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDIT 60

Query: 66  VPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKD 125
           VPDA  RAEKFA+RY+ ILED+KKDPE+HGGPPD ILLCRLREQVLRELGFRDIFKKVKD
Sbjct: 61  VPDAPARAEKFAERYAGILEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKD 120

Query: 126 EENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLA 185
           EENAKAISLF  VV L+D IED+GKR+E+L+RGIFAGNIFDLGSAQLAEVFS+DGMSFLA
Sbjct: 121 EENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIFDLGSAQLAEVFSRDGMSFLA 180

Query: 186 SCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVI 245
           SCQNLVPRPWVIDDLE F+ KW  K+WKKAVIFVDNSGADIILGILPFARELLRRG QV+
Sbjct: 181 SCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVV 240

Query: 246 LAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQEL 305
           LAAN+LPSIND+T  EL EI+S+LKDE GQL+GVDTSKLLIANSGNDLPVIDL+ VSQEL
Sbjct: 241 LAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQEL 300

Query: 306 AYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEV 365
           AYL+SDADLVI+EGMGRGIETNLYAQFKCDSLKIGMVKH EVA+FLGGRLYDCVFK+NEV
Sbjct: 301 AYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV 360
>d2ffja1 e.50.1.1 (A:7-288) Hypothetical protein AF1104 {Archaeoglobus fulgidus [TaxId: 2234]} Length = 282 Back     information, alignment and structure
>d2g8la1 e.50.1.1 (A:1-284) Hypothetical protein PH1575 {Pyrococcus horikoshii [TaxId: 53953]} Length = 284 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query367
d1xfia_360 Hypothetical protein At2g17340 {Thale cress (Arabi 100.0
d2g8la1284 Hypothetical protein PH1575 {Pyrococcus horikoshii 100.0
d2ffja1282 Hypothetical protein AF1104 {Archaeoglobus fulgidu 100.0
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 90.94
d1nhpa2123 NADH peroxidase {Enterococcus faecalis [TaxId: 135 82.71
>d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: AF1104-like
superfamily: AF1104-like
family: AF1104-like
domain: Hypothetical protein At2g17340
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.3e-95  Score=708.97  Aligned_cols=360  Identities=84%  Similarity=1.334  Sum_probs=330.3

Q ss_pred             CCcCCCCCCCCCCCCCCCCcccCCCCCCCCCCCccccccccccccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q 017689            6 ELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAESDPTVPDAHVRAEKFAQRYSEILE   85 (367)
Q Consensus         6 ~~~~~p~l~~~~~~~y~p~~~~~~~~~~~~~~~~~~~~~wm~~~~~ci~c~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~   85 (367)
                      ++||||||.||++++|.||||||.+++++.++++|++.||++||.+++|.|+++|+++...+|+++|+++|+++|.++|.
T Consensus         1 ~~v~~pll~~~~~~~y~~~tv~~~~~~~~~~~~~~~~~~Wl~~f~~~i~~~~~~A~s~~~~~da~~Ra~~f~~~y~~~L~   80 (360)
T d1xfia_           1 EMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDITVPDAPARAEKFAERYAGILE   80 (360)
T ss_dssp             CCBCCTTSCSCCTTTCCSBCSCCCCTTSCTTSCCHHHHHHHHHHHTTHHHHHHHHHTCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred             CCccccccCCccccCccCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Confidence            58999999999888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCCchHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhhhh
Q 017689           86 DMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIF  165 (367)
Q Consensus        86 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~DPy~~~K~~~n~~Al~~~~~l~~~ld~~~~~~~~l~~~l~~alaGN~~  165 (367)
                      +++++|.+||+++.+.++.++++++++.+|+.|||+++|+++|+.|++++|.+++++++++++.++|.++++++++||+|
T Consensus        81 ~l~~~p~~~g~~~~~~ll~~~re~~Lr~~Gf~DpY~~~K~~eN~~Al~~lp~~~~~id~i~d~~~~l~~~vr~aiAGNif  160 (360)
T d1xfia_          81 DLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIF  160 (360)
T ss_dssp             HHHHCTTGGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHC
T ss_pred             HHHhCCcccCcccHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHhh
Confidence            99999999999998667779999999999999999999999999999999999999999987788999999999999999


Q ss_pred             cccchhhhhhhcccCCCHHHHHhhhCCCCcccCCHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHHHHHhCCCEEE
Q 017689          166 DLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVI  245 (367)
Q Consensus       166 D~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~vdd~~~~~~~L~~~~~~~il~~~DNaGeeiv~D~lpLa~~L~~~g~~V~  245 (367)
                      |||+++..++++.+++++.+.++++.++||.+||++.|.+++.+.++|+|+||+|||||+||.+++|++++|+++|++|+
T Consensus       161 D~Ga~~~~~~~~~~~~~~~~~~~~~~~rp~~vDd~d~~~~rl~~~~~k~vly~~DNaGe~Vfd~lL~~~rell~~g~~V~  240 (360)
T d1xfia_         161 DLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVV  240 (360)
T ss_dssp             ---------------CCHHHHTTCSCCSSCSEECHHHHHHHHTTTCCCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEE
T ss_pred             hcccccchhhhccccchHHHHHHHhhcCCCccccHHHHHHHHhcCCcceEEEEecCCchHHHHHHHHHHHHHhcCCCeEE
Confidence            99999888888777789999999999999999999999999987778999999999999667777789999999999999


Q ss_pred             EEecCCcceecCChHHHHHHHHHHhhhhhhhccccccceEecccCCCccCcccccccHHHHHHhccCcEEEEecCCCCCC
Q 017689          246 LAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIE  325 (367)
Q Consensus       246 l~vk~~P~lNDvT~~D~~~~l~~~~~~d~~l~gl~~~~~~vi~sG~~~pg~~l~~~s~el~~~l~~aDLII~KGmgNye~  325 (367)
                      ++||+.|+|||||++|+..++.+++..|+.+.|++++.+.|++||+++||++|+++|+||++++++|||||+|||||.+|
T Consensus       241 l~v~~~PilNDvT~~El~~~~~~~~~~~~~~~gld~~~~~Vv~sG~~~Pg~dL~~~s~E~~~~~~~aDLVI~KGMGr~~~  320 (360)
T d1xfia_         241 LAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIE  320 (360)
T ss_dssp             EEEBSSCCTTBCBHHHHHHHHHHHC--CCEETTEECTTEEEEECCCCSSSCCTTSBCHHHHHHHTTCSEEEEESHHHHTT
T ss_pred             EEECCCcchhhhhHHHHHHHHHHHhhhhhHhhhhcccceEEecCCCCCCCcChHhCCHHHHHHHhcCCEEEEcCCcchhh
Confidence            99999999999999999999999999999999999988999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccCCHHHHHHhCCCcCCeEEEeccC
Q 017689          326 TNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEV  365 (367)
Q Consensus       326 ~~i~~~f~c~~lkl~~~Kc~~vA~~lg~~~~~~V~~~~~~  365 (367)
                      ||++++|+|++|||+||||+|||++||+++||+||+|++.
T Consensus       321 tN~~a~f~c~~lkL~~vK~~~vA~~lGg~~~d~V~k~~~~  360 (360)
T d1xfia_         321 TNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV  360 (360)
T ss_dssp             BSTTCCCSSEEEEEEECCCHHHHHHHTCCTTCEEEEEECC
T ss_pred             ccchhhcCCCeehhhhhcCHHHHHHhCCccccEEEEecCC
Confidence            9999999999999999999999999999999999999873
>d2g8la1 e.50.1.1 (A:1-284) Hypothetical protein PH1575 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2ffja1 e.50.1.1 (A:7-288) Hypothetical protein AF1104 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure