Citrus Sinensis ID: 017742


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccccccEEEEcccccEEEEEEEccEEEEEEEcccEEEEEEcccccEEEEcccccccccccccEEEEEccccccccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHcc
cccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEccccccccccccccccccccccHcccccHHHHEEEEcccccccccccHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHcccccEEEEEcccEEEEEEEEccEEEEEEEccEEEEEcccccccEEEEccccccHHcccccEEEEEcEEEEccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHc
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTslrgrkqvsgcnlfqgrwvidpsyplydssscpfidaefdclkygrpdkqylkyswqpascavprfdggdflrryrgkrimfvgdSLSLNMWESLSCMIhasvpnaktsfvrketlssvsfEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNsiqagkfwkDMDVLIFNSWHwwthtgkaqpwdyiqdGQTLLKDMDRLEAFYKGMSTWARWvdlnvdpsqtkvffqgispthytgkewnsrkknclgeleplsgstypggappaASVVNKVLSsinkpvyllDITTLsqlrkdahpstysgkhsgtdcshwclpglpdtWNQLLYAALTM
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYnvtslrgrkqVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKqylkyswqpascavprFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPthytgkewnsrkKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
MGFGSHvllfwlfqfvllSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
***GSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLG******************SVVNKVLSSINKPVYLLDITTLSQLR************SGTDCSHWCLPGLPDTWNQLLYAAL**
*GFGSHVLLFWLFQFVLLSSMLL*************************LFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKD************TDCSHWCLPGLPDTWNQLLYAALTM
*GFGSHVLLFWLFQFVLLSSMLLKEAE*****************SGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query366
255563106370 conserved hypothetical protein [Ricinus 0.994 0.983 0.75 1e-163
224114702362 predicted protein [Populus trichocarpa] 0.989 1.0 0.729 1e-159
449462645373 PREDICTED: uncharacterized protein LOC10 0.980 0.962 0.717 1e-157
356555410375 PREDICTED: uncharacterized protein LOC10 0.928 0.906 0.740 1e-154
357446949360 hypothetical protein MTR_2g015720 [Medic 0.978 0.994 0.706 1e-154
224076992411 predicted protein [Populus trichocarpa] 0.989 0.880 0.657 1e-153
388514377361 unknown [Lotus japonicus] 0.975 0.988 0.708 1e-153
356521442368 PREDICTED: uncharacterized protein LOC10 0.983 0.978 0.695 1e-153
297851330380 hypothetical protein ARALYDRAFT_473111 [ 0.901 0.868 0.742 1e-153
18396930380 protein trichome birefringence-like 38 [ 0.901 0.868 0.739 1e-152
>gi|255563106|ref|XP_002522557.1| conserved hypothetical protein [Ricinus communis] gi|223538248|gb|EEF39857.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/372 (75%), Positives = 318/372 (85%), Gaps = 8/372 (2%)

Query: 1   MGFGS----HVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSL-RGRKQVSG-CNLFQGRW 54
           MGF S     VL+    Q VLL +  L+E  A+QH YNVT L +GRKQVS  CNLFQG+W
Sbjct: 1   MGFSSKSRCQVLVSLFSQLVLLFT-FLQETTAQQHYYNVTRLLKGRKQVSSTCNLFQGKW 59

Query: 55  VIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGK 114
           V+DP+YPLYD+S CPFID EF+C K+GRPD QYLKYSWQP SC VPRF+G DFLRR+RGK
Sbjct: 60  VVDPAYPLYDASGCPFIDPEFNCQKFGRPDTQYLKYSWQPDSCNVPRFNGVDFLRRWRGK 119

Query: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVD 174
           +IMFVGDSLSLNMWESLSCMIHASVPNAKTS V +++L SV+F+EY VTL ++RTPYLVD
Sbjct: 120 KIMFVGDSLSLNMWESLSCMIHASVPNAKTSSVDRDSLHSVTFDEYDVTLYMFRTPYLVD 179

Query: 175 IVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRL 234
           IV++ VGRVL L+SI+ G  WK MD+LIFNSWHWWTHTG++QPWDY++ G +L KDMDRL
Sbjct: 180 IVRESVGRVLRLDSIEGGNAWKGMDLLIFNSWHWWTHTGRSQPWDYVRAGASLYKDMDRL 239

Query: 235 EAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYP 294
           EAFY+GMSTWA+WVD NVDP++TKVFFQGISPTHY G+EWN  KK+C GE EPLSGSTYP
Sbjct: 240 EAFYRGMSTWAKWVDQNVDPAKTKVFFQGISPTHYEGREWNQPKKSCNGEAEPLSGSTYP 299

Query: 295 GGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPD 354
           GGAPPA +VVNKVLS+I KPVYLLDITTLSQLRKDAHPSTY G  SGTDCSHWCLPGLPD
Sbjct: 300 GGAPPAVAVVNKVLSTIKKPVYLLDITTLSQLRKDAHPSTY-GDGSGTDCSHWCLPGLPD 358

Query: 355 TWNQLLYAALTM 366
           TWNQLLYAAL M
Sbjct: 359 TWNQLLYAALVM 370




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114702|ref|XP_002316834.1| predicted protein [Populus trichocarpa] gi|222859899|gb|EEE97446.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449462645|ref|XP_004149051.1| PREDICTED: uncharacterized protein LOC101203509 [Cucumis sativus] gi|449509029|ref|XP_004163473.1| PREDICTED: uncharacterized LOC101203509 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356555410|ref|XP_003546025.1| PREDICTED: uncharacterized protein LOC100818476 [Glycine max] Back     alignment and taxonomy information
>gi|357446949|ref|XP_003593750.1| hypothetical protein MTR_2g015720 [Medicago truncatula] gi|355482798|gb|AES64001.1| hypothetical protein MTR_2g015720 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224076992|ref|XP_002305083.1| predicted protein [Populus trichocarpa] gi|222848047|gb|EEE85594.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388514377|gb|AFK45250.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356521442|ref|XP_003529365.1| PREDICTED: uncharacterized protein LOC100803167 [Glycine max] Back     alignment and taxonomy information
>gi|297851330|ref|XP_002893546.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] gi|297339388|gb|EFH69805.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18396930|ref|NP_564318.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] gi|18377638|gb|AAL66969.1| unknown protein [Arabidopsis thaliana] gi|20465655|gb|AAM20296.1| unknown protein [Arabidopsis thaliana] gi|110742767|dbj|BAE99289.1| hypothetical protein [Arabidopsis thaliana] gi|332192916|gb|AEE31037.1| protein trichome birefringence-like 38 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query366
TAIR|locus:2029959380 TBL38 "AT1G29050" [Arabidopsis 0.901 0.868 0.739 1.9e-145
TAIR|locus:2055425385 TBL37 "AT2G34070" [Arabidopsis 0.896 0.851 0.728 1.3e-141
TAIR|locus:2041574367 TBL39 "AT2G42570" [Arabidopsis 0.885 0.882 0.64 3.1e-122
TAIR|locus:2055878364 AT2G31110 "AT2G31110" [Arabido 0.915 0.920 0.610 1.1e-119
TAIR|locus:2099402356 TBL41 "TRICHOME BIREFRINGENCE- 0.863 0.887 0.564 2.9e-103
TAIR|locus:2037498359 TBL42 "TRICHOME BIREFRINGENCE- 0.882 0.899 0.524 6.2e-101
TAIR|locus:2178813402 PMR5 "AT5G58600" [Arabidopsis 0.874 0.796 0.507 1.1e-89
TAIR|locus:2045688398 TBL45 "AT2G30010" [Arabidopsis 0.800 0.736 0.459 7.7e-71
TAIR|locus:2080280379 TBL36 "AT3G54260" [Arabidopsis 0.871 0.841 0.410 1.4e-69
TAIR|locus:2096094475 TBL6 "AT3G62390" [Arabidopsis 0.877 0.675 0.390 2.2e-66
TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
 Identities = 247/334 (73%), Positives = 293/334 (87%)

Query:    36 TSLRGRKQ--VSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQ 93
             +SLRG+KQ   SGCNLFQGRWV D SYP YDSS CPFID EFDCLK+GRPDKQ+LKYSWQ
Sbjct:    48 SSLRGKKQRRASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQ 107

Query:    94 PASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLS 153
             P SC +PRFDGG FLR+YRGKR+MFVGDSLSLNMWESL+CMIHASVPNAKT+F+++  LS
Sbjct:   108 PESCTIPRFDGGAFLRKYRGKRVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLS 167

Query:   154 SVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGK-FWKDMDVLIFNSWHWWTHT 212
             +++F+EYGVTL LYRTPY+VDI K++VGRVL L +I+ G   WK+MDVL+FNSWHWWTH 
Sbjct:   168 TLTFQEYGVTLYLYRTPYIVDISKERVGRVLNLGAIEGGADAWKNMDVLVFNSWHWWTHK 227

Query:   213 GKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGK 272
             G++Q WDYI+DG +L++DM+RL+AFYKG+STWARWVD NVD ++T+VFFQGISPTHY G+
Sbjct:   228 GQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHYEGR 287

Query:   273 EWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHP 332
             EWN  +K C G+++PL GS+YP G PP++ VV+KVLSS+ KPV LLDITTLSQLRKDAHP
Sbjct:   288 EWNEPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLSQLRKDAHP 347

Query:   333 STYSGKHSGTDCSHWCLPGLPDTWNQLLYAALTM 366
             S+Y G   GTDCSHWCLPGLPDTWNQLLYAALTM
Sbjct:   348 SSYGGD-GGTDCSHWCLPGLPDTWNQLLYAALTM 380




GO:0008150 "biological_process" evidence=ND
TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00110748
hypothetical protein (362 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query366
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 1e-146
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 1e-107
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 1e-25
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  417 bits (1073), Expect = e-146
 Identities = 186/335 (55%), Positives = 223/335 (66%), Gaps = 15/335 (4%)

Query: 45  SGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFD 103
           S C LF G WV D SYPLY SS CP  ID EF+C  YGRPD  YLKY WQP +C +PRF+
Sbjct: 51  STCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFN 110

Query: 104 GGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVT 163
           G +FL + +GK +MFVGDSL  N WESL C+I +SVP+ +T   R + LS+  F +YGV+
Sbjct: 111 GLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVS 170

Query: 164 LLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQ 222
           +  Y+ PYLVDI   +  RVL L  I      W+D DVLIFN+ HWW+H G  Q WDYI+
Sbjct: 171 ISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIE 230

Query: 223 DGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWN----SRK 278
            G T  +DMDRL A  K + TWA WVD NVD S+T+VFFQ ISPTHY   EW+    +  
Sbjct: 231 SGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGASTTT 290

Query: 279 KNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGK 338
           KNC GE  P+SG TYPG  P    VV++V+  ++ P YLLDIT LS+LRKD HPS YSG 
Sbjct: 291 KNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGD 350

Query: 339 HSGT---------DCSHWCLPGLPDTWNQLLYAAL 364
            S +         DCSHWCLPGLPDTWNQL Y AL
Sbjct: 351 LSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL 385


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 366
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.93
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.6
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 96.37
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 95.64
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 95.59
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 95.1
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 94.16
COG2845354 Uncharacterized protein conserved in bacteria [Fun 90.81
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 88.95
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=1.4e-114  Score=851.17  Aligned_cols=325  Identities=57%  Similarity=1.103  Sum_probs=300.2

Q ss_pred             CCCCCCcCcccceeeCCCCCCCCCCCCC-CCccccccccCCCCCCCcccceeecCCCCCCCCChHHHHHHhcCCeEEEEe
Q 017742           42 KQVSGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVG  120 (366)
Q Consensus        42 ~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpd~~y~~wrWqP~~C~l~rfd~~~fl~~LrgK~l~FVG  120 (366)
                      ...++||+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||||||.+||++||||+|||||
T Consensus        48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG  127 (387)
T PLN02629         48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG  127 (387)
T ss_pred             CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence            4457899999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHhhhccCCCCcccccccCcceEEEEeecCeEEEEEecCccccceeccccceEEeccccc-CCCCCccc
Q 017742          121 DSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMD  199 (366)
Q Consensus       121 DSl~Rn~~~SLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~i~~-~~~~~~~D  199 (366)
                      |||+|||||||+|||++++|+..+....+++..+|+|++||+||+||||||||+.+.....++++||+++. ++.|+++|
T Consensus       128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~D  207 (387)
T PLN02629        128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDAD  207 (387)
T ss_pred             cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCC
Confidence            99999999999999999988765544456778899999999999999999999987665567999999986 78899999


Q ss_pred             EEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCcC--
Q 017742          200 VLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSR--  277 (366)
Q Consensus       200 vlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~~--  277 (366)
                      ||||||||||.+.+..++++|++.|++++++|++.+|||+||+||++||++++++.+|+|||||+||+||+||+||..  
T Consensus       208 vlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg~  287 (387)
T PLN02629        208 VLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAS  287 (387)
T ss_pred             EEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCCC
Confidence            999999999999988888999999999999999999999999999999999998889999999999999999999942  


Q ss_pred             --CCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccccccccCCCCCcCCC---------CCCCCcee
Q 017742          278 --KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGK---------HSGTDCSH  346 (366)
Q Consensus       278 --gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~~R~DaHp~~y~~~---------~~~~DC~H  346 (366)
                        +|+|+++|+|+.++++.++...+++++++++++++.+|++||||+||++|||||||+|++.         ..++||+|
T Consensus       288 ~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~H  367 (387)
T PLN02629        288 TTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCSH  367 (387)
T ss_pred             CCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCccc
Confidence              2579999999998877777777888999999999999999999999999999999999742         34689999


Q ss_pred             eccCCchhHHHHHHHHHHhC
Q 017742          347 WCLPGLPDTWNQLLYAALTM  366 (366)
Q Consensus       347 WClPG~~DtWN~lL~~~L~~  366 (366)
                      |||||||||||||||++|+.
T Consensus       368 WCLPGvpDTWNelL~a~L~~  387 (387)
T PLN02629        368 WCLPGLPDTWNQLFYTALFF  387 (387)
T ss_pred             ccCCCCCccHHHHHHHHHhC
Confidence            99999999999999999974



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query366
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 97.25
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 96.17
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 94.03
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 80.99
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=97.25  E-value=0.00047  Score=60.26  Aligned_cols=92  Identities=12%  Similarity=0.111  Sum_probs=55.8

Q ss_pred             cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742          197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS  276 (366)
Q Consensus       197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~  276 (366)
                      .+|+|||+.|..=..                    ...+.|++.++++.+-+.+.  .+++++++-+..|....  .+. 
T Consensus        74 ~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~--~~~-  128 (200)
T 4h08_A           74 KFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTG--EGM-  128 (200)
T ss_dssp             CCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEES--GGG-
T ss_pred             CCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCccc--ccc-
Confidence            379999999875211                    11457888888888776553  35778999998886532  111 


Q ss_pred             CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccccc
Q 017742          277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQL  326 (366)
Q Consensus       277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~~  326 (366)
                         ....+.        .......+++++++.++  .++.++|++..+.-
T Consensus       129 ---~~~~~~--------~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~~  165 (200)
T 4h08_A          129 ---KEFAPI--------TERLNVRNQIALKHINR--ASIEVNDLWKVVID  165 (200)
T ss_dssp             ---CEECTH--------HHHHHHHHHHHHHHHHH--TTCEEECHHHHHTT
T ss_pred             ---cccchh--------HHHHHHHHHHHHHHhhh--cceEEEecHHhHhc
Confidence               000000        00012345677777766  47899999876653



>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query366
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 96.71
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 96.3
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 84.43
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]
Probab=96.71  E-value=0.0015  Score=55.16  Aligned_cols=92  Identities=16%  Similarity=0.064  Sum_probs=49.5

Q ss_pred             CcccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccC
Q 017742          196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWN  275 (366)
Q Consensus       196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~  275 (366)
                      +..|+|||..|.-=...          .+      -...+.|+..++++++-+.+    ....+++-+..| +... .+ 
T Consensus        70 ~~~D~vvi~~G~ND~~~----------~~------~~~~~~~~~~l~~li~~~~~----~~~~~vl~~~~~-~~~~-~~-  126 (208)
T d2o14a2          70 KPGDYFMLQLGINDTNP----------KH------KESEAEFKEVMRDMIRQVKA----KGADVILSTPQG-RATD-FT-  126 (208)
T ss_dssp             CTTCEEEEECCTGGGCG----------GG------CCCHHHHHHHHHHHHHHHHT----TTCEEEEECCCC-CTTC-BC-
T ss_pred             CCCCEEEEEcCCCcccc----------cc------cccHHHHHHHHHHHHHHHHh----cCCceeeccccc-cccc-cc-
Confidence            44799999988542110          00      02356788888888776543    234455544333 2210 00 


Q ss_pred             cCCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecccccc
Q 017742          276 SRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQ  325 (366)
Q Consensus       276 ~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~  325 (366)
                           ......+        .....+++++++.++  .++.++|++.++.
T Consensus       127 -----~~~~~~~--------~~~~~~~~~~~~a~~--~~v~~vD~~~~~~  161 (208)
T d2o14a2         127 -----SEGIHSS--------VNRWYRASILALAEE--EKTYLIDLNVLSS  161 (208)
T ss_dssp             -----TTSCBCC--------TTSTTHHHHHHHHHH--TTCEEECHHHHHH
T ss_pred             -----cccchHH--------HHHHHHHHHHHhhcc--CCcEEeccHHHHH
Confidence                 0001001        113456778888777  4688899987764



>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure