Citrus Sinensis ID: 017757
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 366 | 2.2.26 [Sep-21-2011] | |||||||
| Q06136 | 332 | 3-ketodihydrosphingosine | yes | no | 0.814 | 0.897 | 0.311 | 2e-41 | |
| Q6GV12 | 332 | 3-ketodihydrosphingosine | yes | no | 0.808 | 0.891 | 0.324 | 3e-41 | |
| Q2KIJ5 | 331 | 3-ketodihydrosphingosine | yes | no | 0.808 | 0.894 | 0.300 | 5e-40 | |
| Q556J2 | 334 | 3-ketodihydrosphingosine | yes | no | 0.795 | 0.871 | 0.262 | 4e-25 | |
| Q7RZR2 | 325 | 3-ketodihydrosphingosine | N/A | no | 0.715 | 0.806 | 0.264 | 4e-15 | |
| Q9Y7P2 | 494 | Uncharacterized protein C | yes | no | 0.781 | 0.578 | 0.238 | 4e-14 | |
| Q49WS9 | 246 | Uncharacterized oxidoredu | yes | no | 0.557 | 0.829 | 0.251 | 6e-14 | |
| Q6CE86 | 372 | 3-ketodihydrosphingosine | yes | no | 0.762 | 0.75 | 0.251 | 1e-12 | |
| Q5HLD8 | 230 | Uncharacterized oxidoredu | yes | no | 0.371 | 0.591 | 0.307 | 4e-12 | |
| Q8CN40 | 230 | Uncharacterized oxidoredu | yes | no | 0.371 | 0.591 | 0.307 | 4e-12 |
| >sp|Q06136|KDSR_HUMAN 3-ketodihydrosphingosine reductase OS=Homo sapiens GN=KDSR PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 184/350 (52%), Gaps = 52/350 (14%)
Query: 25 IVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA 84
++ PKP+ +P HV +TGGSSGIG +A + K+GA ++++AR+ KL +AK+ I++
Sbjct: 22 LISPKPLALP--GAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEMH 79
Query: 85 TGIE---VATYSADV-RDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVR 136
+ + V S DV +D++ V+ + +A GPVD+LV G+ V G+ E +
Sbjct: 80 SINDKQVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGMAVSGKFEDLEVSTFE 139
Query: 137 LMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196
++ +N GS + +A + +K+R+ G I +SSQAGQ
Sbjct: 140 RLMSINYLGSVYPSRAVITTMKERRVG---RIVFVSSQAGQ------------------- 177
Query: 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP 256
L G + ASKF +RGLAEALQ EV ++++++ +PP
Sbjct: 178 --------------------LGLFGFTAYSASKFAIRGLAEALQMEVKPYNVYITVAYPP 217
Query: 257 DTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIA 316
DT+TPG EEN+ +P T +I+ ++ K ++VAK+ + G+F S+G++LS
Sbjct: 218 DTDTPGFAEENRTKPLETRLISETTSVCKPEQVAKQIVKDAIQGNFNSSLGSDGYMLSAL 277
Query: 317 TAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKWHAQGKRSGN 366
T G++P S+ +VV GL R +AL + ++ + + Q ++S N
Sbjct: 278 TCGMAPVTSITEGLQQVVTMGLFRTIALFYLGSFDSIVRRCMMQREKSEN 327
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Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS). Homo sapiens (taxid: 9606) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 0EC: 2 |
| >sp|Q6GV12|KDSR_MOUSE 3-ketodihydrosphingosine reductase OS=Mus musculus GN=Kdsr PE=2 SV=1 | Back alignment and function description |
|---|
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 188/357 (52%), Gaps = 61/357 (17%)
Query: 18 LLLLLYLI---VRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74
+LLLY++ + PKP+ +P HV +TGGSSGIG +A + K+GA ++++AR+ KL
Sbjct: 12 FVLLLYMVSPLISPKPLALP--GAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKL 69
Query: 75 EEAKQSIQ---LATGIEVATYSADV-RDFDAVKTALDEA----GPVDVLVVNQGVFVPG- 125
+AK+ I+ + V S DV +D++ V+ + +A GPVD+LV G + G
Sbjct: 70 LQAKKDIEKHSINDKQVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGTSMSGK 129
Query: 126 --ELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183
ELEV S ++ ++ +N GS + +A + +K+R+ G I +SSQAGQ
Sbjct: 130 FEELEVSSFEK---LMSINYLGSVYPSRAVITTMKERRVG---RIVFVSSQAGQLG---- 179
Query: 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV 243
L G + +SKF +RGLAEALQ EV
Sbjct: 180 -----------------------------------LFGFTAYSSSKFAIRGLAEALQMEV 204
Query: 244 IADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFI 303
+++V++ +PPDT+TPGL EENK +P T +I+ ++ K ++VAK+ + G+F
Sbjct: 205 KPYNVYVTVAYPPDTDTPGLAEENKTKPLETRLISETTAICKPEQVAKQIVKDAIQGNFN 264
Query: 304 VPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKWHAQ 360
S+G++LS T G++P S+ +VV GL R +AL + ++ + + Q
Sbjct: 265 SSIGSDGYMLSSLTCGMAPVTSITEGLQQVVTMGLFRTIALFYLGSFDNIVRRCMVQ 321
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Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 2 |
| >sp|Q2KIJ5|KDSR_BOVIN 3-ketodihydrosphingosine reductase OS=Bos taurus GN=KDSR PE=2 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 186/356 (52%), Gaps = 60/356 (16%)
Query: 18 LLLLLYLI---VRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74
+LLLY++ + PKP+ +P HV +TGGSSGIG +A + K+GA ++++AR+ KL
Sbjct: 12 FVLLLYMVSPLISPKPLALP--GAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKL 69
Query: 75 EEAKQSIQ----------LATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVP 124
+AK+ I+ L ++V+ + V + +K A ++ GPVD+LV G+ +
Sbjct: 70 LQAKKEIEKHSINDKQVVLCISVDVSQDYSQVEN--VIKQAQEKLGPVDMLVNCAGMSLS 127
Query: 125 GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184
G+ E + ++ +N GS + +A + +K+R+ G + +SSQAGQ
Sbjct: 128 GKFEDLEVSTFERLMSINYLGSVYPSRAVIATMKERRMG---RVVFVSSQAGQLG----- 179
Query: 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI 244
L G + +SKF LRGLAEALQ EV
Sbjct: 180 ----------------------------------LFGYTAYSSSKFALRGLAEALQMEVK 205
Query: 245 ADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIV 304
+++V++ +PPDT+TPG +EN+ +P T +I+ ++ K ++VAK+ + ++ G+F
Sbjct: 206 PYNVYVTVAYPPDTDTPGFAKENQTKPLETRLISETTSVCKPEQVAKQIVKDVQ-GNFNS 264
Query: 305 PCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKWHAQ 360
S+G++LS T G++P S++ +VV GL R +AL + ++ + + Q
Sbjct: 265 SIGSDGYMLSSLTCGMAPVTSIMEGLQQVVTMGLFRTIALFYLGSFDSIVRRCMMQ 320
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Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS). Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 2 |
| >sp|Q556J2|KDSR_DICDI 3-ketodihydrosphingosine reductase OS=Dictyostelium discoideum GN=ksrA-1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 63/354 (17%)
Query: 10 LVLLLPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILA 68
+ +L L ++++L+ + K +K +H+ + GGSSGIG L ++ KE A +S+++
Sbjct: 3 IYILFSLLAAVIVHLVYK-KQTGFKLKGKHIVVVGGSSGIGKELVYELLKENIASISVIS 61
Query: 69 RSGKKL---------EEAKQSIQLATGI---EVATYSADVRDFDAVKTAL------DEAG 110
RS KL E +S L G ++ YS D+ + VK + ++ G
Sbjct: 62 RSLDKLRSVVDDCPSEVCTKSTPLNVGSLKSKIEIYSCDITNKIKVKETIAQIVSKNQGG 121
Query: 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIAL 170
+D L+ G +PG Q + + ++ GS + K +PL+ +NGG
Sbjct: 122 KIDCLINCAGFAIPGYFIEQDEEIFEKTMQLDYFGSLYATKEVVPLM--IENGG------ 173
Query: 171 MSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKF 230
GG H+ G + G + SKF
Sbjct: 174 -------------------------------QGG-HIVFVSSTCGLVGVPGYSTYCPSKF 201
Query: 231 GLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVA 290
LRGLAE L+ E+ I S+++PPDT+TPG ++EN +P T I+ A+ EVA
Sbjct: 202 ALRGLAETLRSELKPYKITFSVVYPPDTDTPGYQQENLTKPEETVAISGGGKAVSPLEVA 261
Query: 291 KKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVAL 344
K + GIK+G + + + L ++ + GL+P +F +++ A + R V +
Sbjct: 262 KSIVSGIKNGDYHIAYDVPTKLCAVLSPGLTP---FYFSFFDILLAPICRLVGI 312
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Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS). Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 2 |
| >sp|Q7RZR2|TSC10_NEUCR 3-ketodihydrosphingosine reductase tsc-10 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tsc-10 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 140/310 (45%), Gaps = 48/310 (15%)
Query: 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT---GIEV 89
+P++ R V +TG S G+G + A Q +++GA V +++R+ +LEEA ++ A +
Sbjct: 10 MPVEGRTVLLTGASEGMGRSAAIQLSQKGANVILVSRNVGRLEEALVDVRAAAKNPSTQR 69
Query: 90 ATY-SADVRDFD------AVKTALDEAGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDV 141
TY SADV + D A A + D++ G+ P + S+ R +DV
Sbjct: 70 FTYISADVSEHDYAAAVLAEAIAWNGGRSPDIVWCVAGMSTPLLWTDDGSMAAARRNMDV 129
Query: 142 NITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKG 201
N GS M +A L R+ P EN S+G
Sbjct: 130 NYFGSAEMSRAIL-----REWLAP-------------------------EN----STGPN 155
Query: 202 HGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV---IADDIHVSLIFPPDT 258
H+ + F +LG + +K+ LRGLA+ L EV + + V +++P
Sbjct: 156 GEPKHLVFTASMLALFAILGYGPYTPTKWALRGLADTLAMEVNYYPDNPVKVHIVYPGTI 215
Query: 259 ETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATA 318
+PG E EN+ +P +T + A D VA++A+ G+++G + V + G L+
Sbjct: 216 VSPGYERENQTKPDITVELEKDEPAESPDTVARRAIAGLEAGKYFVDVSFLGRLMQCGIM 275
Query: 319 GLSPQRSVLM 328
G SP+ + ++
Sbjct: 276 GGSPRNNWVL 285
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Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS). Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 2 |
| >sp|Q9Y7P2|YCKF_SCHPO Uncharacterized protein C1450.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1450.15 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 137/339 (40%), Gaps = 53/339 (15%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI---QLATGIEVATYSA 94
+H+ +TGGS G+G A+A + GA V+I+AR+ KL+EA + ++ +V+ S
Sbjct: 14 KHILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESV 73
Query: 95 DVRDFDAVKTALDEAGPV-DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D+ +++V + ++ D +V G +PG + N S ++ AA
Sbjct: 74 DLTSYESVHSMIERLPFCPDHVVHCAGSCIPGFFTELDPSVFEKQMRQNYLASVYVCHAA 133
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
+ +K+ I L+ S I G+ Y
Sbjct: 134 IRRMKEISPSYSRRILLVGSLLSSLPII-------------------GYSAYSPV----- 169
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
K +R LA++L+QE I DI VS+ P +PG E+EN +P L
Sbjct: 170 ---------------KAAVRNLADSLRQECILYDIEVSVYLPSTILSPGYEQENTLKPEL 214
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRS----VLMA 329
+ +E A + G+ G F++ S G L+ SP + L A
Sbjct: 215 VLQMEGMDSVQTCEEAASHCMTGLDRGDFLIANESTGHLMKNHCRNSSPHDNPILEYLFA 274
Query: 330 FVEVVAAGLIR--FVALCFQWNWYGSIEKWHAQGKRSGN 366
V ++A R +L +Q+ ++EK + Q S N
Sbjct: 275 LVSLLAWPFYRRKLDSLVYQY----ALEKGYRQPSSSRN 309
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q49WS9|Y1627_STAS1 Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 62/266 (23%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+KD+ V ITG SSGIG + ++ GA++ + AR +LE+ +Q + + V+
Sbjct: 4 VKDKVVVITGASSGIGEETVNLLSENGAKLVLGARRLDRLEKIQQKVGHDS---VSIKKT 60
Query: 95 DVRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D V +TA ++ G +DVL+ N G+ LE DE MIDVNI G + I
Sbjct: 61 DVTKPDEVNALIETAYNDFGRIDVLINNAGLMPQSFLEKNKQDEWNQMIDVNIKGVLYGI 120
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
A LP ++K+++G H+ +
Sbjct: 121 GAVLPYMRKQKSG------------------------------------------HIINL 138
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQE--VIADDIHVSLIFPPDTETPGLEEENK 268
++G G+ ++ +K+ +R + E L+QE ++ +I +++ P T
Sbjct: 139 ASVAGHVVFPGSAVYCGTKYAVRAITEGLRQEEAIVGSNIRTTILSPGAVST-------- 190
Query: 269 RRPRLTSIIAASSGAMKADEVAKKAL 294
LT I+ DE+ K A+
Sbjct: 191 ---ELTDHISDKDMKQDIDELYKNAI 213
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Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q6CE86|TSC10_YARLI 3-ketodihydrosphingosine reductase TSC10 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TSC10 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 138/330 (41%), Gaps = 51/330 (15%)
Query: 7 LGFLVLLLPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSI 66
LGFLV+ + ++ PK + IK + V I+GGS G G ALA +GA V I
Sbjct: 36 LGFLVVAR------IAVILATPKRRVLDIKGKKVVISGGSQGAGAALAELCYTKGANVVI 89
Query: 67 LARSGKKLEEAKQSI-----QLATGIEVATYSADV-RDFDAVKTALDEA--GPVDVLVVN 118
++R+ KLE Q I + G + SAD+ ++ +A++ +E P DV+
Sbjct: 90 VSRTVSKLEAQVQKIVTKHEPVFEGQTIRYISADLTKEEEAIRVFSEETMPAPPDVIFSC 149
Query: 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178
G G + ++ N + + A + A +
Sbjct: 150 AGAAETGFILDFKASQLARAFSTNYLSALFFVHAG-----------------TTRMAKEP 192
Query: 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEA 238
+ KN I + L G+G Q+C ASK +R L ++
Sbjct: 193 ISPKNPRYVAIFSSVLAFYPLLGYG------------QYC--------ASKAAVRSLIDS 232
Query: 239 LQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIK 298
L+ E + +I V +FP + ++ G EEENK +P +T I S A+ A+E AK ++
Sbjct: 233 LRVEALPFNIRVVGVFPGNFQSEGFEEENKSKPEITRQIEGPSQAISAEECAKIVFAQME 292
Query: 299 SGSFIVPCNSEGFLLSIATAGLSPQRSVLM 328
G ++ + G++L SP+ L+
Sbjct: 293 KGGQMITTDLIGWILQSIALSSSPRSFSLL 322
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Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS). Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 2 |
| >sp|Q5HLD8|Y2049_STAEQ Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K++ +TG SSGIG A+A + +++GA + ++ R+ ++L E Q QL T +V +
Sbjct: 4 VKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQ--QLNTPAKVVSADV 61
Query: 95 DVRDF--DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
V+ D +K +D G +D++V + G + ++ ++++ MIDVNI G+ H+++A
Sbjct: 62 TVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSSKITDYNVEQWDTMIDVNIKGTLHVLQA 121
Query: 153 ALPLIKKRQNGGPASIALMS 172
LP + K+ +G ++A +S
Sbjct: 122 TLPYLLKQSSGHIINLASVS 141
|
Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q8CN40|Y2036_STAES Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2036 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K++ +TG SSGIG A+A + +++GA + ++ R+ ++L E Q QL T +V +
Sbjct: 4 VKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQ--QLNTPAKVVSADV 61
Query: 95 DVRDF--DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
V+ D +K +D G +D++V + G + ++ ++++ MIDVNI G+ H+++A
Sbjct: 62 TVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSSKITDYNVEQWDTMIDVNIKGTLHVLQA 121
Query: 153 ALPLIKKRQNGGPASIALMS 172
LP + K+ +G ++A +S
Sbjct: 122 TLPYLLKQSSGHIINLASVS 141
|
Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 366 | ||||||
| 255552283 | 456 | short-chain dehydrogenase, putative [Ric | 0.816 | 0.655 | 0.692 | 1e-125 | |
| 449515373 | 326 | PREDICTED: 3-ketodihydrosphingosine redu | 0.822 | 0.923 | 0.667 | 1e-122 | |
| 449432720 | 326 | PREDICTED: 3-ketodihydrosphingosine redu | 0.822 | 0.923 | 0.664 | 1e-122 | |
| 297833348 | 326 | short-chain dehydrogenase/reductase fami | 0.868 | 0.975 | 0.612 | 1e-118 | |
| 356555636 | 329 | PREDICTED: 3-ketodihydrosphingosine redu | 0.819 | 0.911 | 0.643 | 1e-116 | |
| 224109358 | 291 | predicted protein [Populus trichocarpa] | 0.792 | 0.996 | 0.684 | 1e-116 | |
| 30679701 | 326 | Rossmann-fold NAD(P)-binding domain-cont | 0.868 | 0.975 | 0.618 | 1e-115 | |
| 7658344 | 327 | unknown protein; 15741-13972 [Arabidopsi | 0.868 | 0.972 | 0.618 | 1e-115 | |
| 356548983 | 326 | PREDICTED: 3-ketodihydrosphingosine redu | 0.882 | 0.990 | 0.613 | 1e-115 | |
| 356548985 | 329 | PREDICTED: 3-ketodihydrosphingosine redu | 0.887 | 0.987 | 0.612 | 1e-115 |
| >gi|255552283|ref|XP_002517186.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223543821|gb|EEF45349.1| short-chain dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/338 (69%), Positives = 262/338 (77%), Gaps = 39/338 (11%)
Query: 25 IVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA 84
IVRP+ V+IPIK+RHVFITGGSSGIGLALAH+A EGARVSILARS KLEEAK I+L+
Sbjct: 28 IVRPRTVKIPIKNRHVFITGGSSGIGLALAHRAVSEGARVSILARSLDKLEEAKNYIRLS 87
Query: 85 TGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIT 144
TG++VA + ADVRDF+++K A+ EAGP+DVLVVNQGVF P ELE Q L EV MIDVN+
Sbjct: 88 TGVDVAIFPADVRDFESLKKAVTEAGPIDVLVVNQGVFFPEELEKQELSEVNFMIDVNLI 147
Query: 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGG 204
GSF+MIKAALP++K R++ GPASIALMSSQAGQ G
Sbjct: 148 GSFNMIKAALPVMKNRKDSGPASIALMSSQAGQV------------------------GI 183
Query: 205 YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264
Y T++ ASKFGLRGLAEALQQEVIA +IHVSLIFPPDTETPGL
Sbjct: 184 YGYTAYS---------------ASKFGLRGLAEALQQEVIAYNIHVSLIFPPDTETPGLA 228
Query: 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQR 324
EENKRRP+LTS+IAASSG MKADEVAKKALDGIK G+F VPCN EG LL++ATAGLSPQR
Sbjct: 229 EENKRRPQLTSVIAASSGVMKADEVAKKALDGIKCGAFFVPCNFEGMLLTVATAGLSPQR 288
Query: 325 SVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKWHAQGK 362
S MAFVEVVAAGLIR VALCFQWNWYGSIEKWHAQ K
Sbjct: 289 SFSMAFVEVVAAGLIRLVALCFQWNWYGSIEKWHAQKK 326
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449515373|ref|XP_004164724.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/340 (66%), Positives = 257/340 (75%), Gaps = 39/340 (11%)
Query: 25 IVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA 84
IVRP+PVRI +K RHVFITGGSSGIGLALAHQAA EGARVSILARS KKLEEAK +I+L+
Sbjct: 26 IVRPRPVRISLKSRHVFITGGSSGIGLALAHQAATEGARVSILARSLKKLEEAKDAIRLS 85
Query: 85 TGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIT 144
TGI+VA Y+ADVRD+DA+ A+DEAGP+DVL+VNQGVFVP EL Q LDEV+ M+DVN+
Sbjct: 86 TGIDVAVYAADVRDYDAILKAVDEAGPIDVLIVNQGVFVPQELAAQELDEVKFMLDVNLL 145
Query: 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGG 204
G+F+MIKAALP +K R + PASIALMSSQAGQ G G
Sbjct: 146 GTFNMIKAALPAMKNRVDRRPASIALMSSQAGQV----------------------GIYG 183
Query: 205 YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264
Y S ASKFG+RGLAEALQQEVI DDIHVSLIFPPDT+TPG
Sbjct: 184 YAAYS-----------------ASKFGIRGLAEALQQEVIGDDIHVSLIFPPDTDTPGFA 226
Query: 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQR 324
EE K+RP LT+IIAA G+MK + VAKKA +GIKSGSFI+PCN EG LLSIATAGLSPQR
Sbjct: 227 EEQKKRPELTTIIAAGGGSMKPELVAKKAFNGIKSGSFIIPCNFEGTLLSIATAGLSPQR 286
Query: 325 SVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKWHAQGKRS 364
S MAF+EVV AG+IR VALCFQW WYGSIEKWHAQ R+
Sbjct: 287 SFFMAFIEVVGAGVIRIVALCFQWVWYGSIEKWHAQRNRT 326
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449432720|ref|XP_004134147.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/340 (66%), Positives = 258/340 (75%), Gaps = 39/340 (11%)
Query: 25 IVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA 84
IVRP+PVRI +K RHVFITGGSSGIGLALAHQAA EGARVSILARS KKLEEAK +I+L+
Sbjct: 26 IVRPRPVRISLKSRHVFITGGSSGIGLALAHQAATEGARVSILARSLKKLEEAKDAIRLS 85
Query: 85 TGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIT 144
TGI+VA Y+ADVRD+DA+ A+DEAGP+DVL+VNQGVFVP EL Q LDEV+ M+DVN+
Sbjct: 86 TGIDVAVYAADVRDYDAILKAVDEAGPIDVLIVNQGVFVPQELAEQELDEVKFMLDVNLL 145
Query: 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGG 204
G+F+MIKAALP +K R + PASIALMSSQAGQ G
Sbjct: 146 GTFNMIKAALPAMKNRVDRRPASIALMSSQAGQV------------------------GI 181
Query: 205 YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264
Y T++ ASKFG+RGLAEALQQEVI DDIHVSLIFPPDT+TPG
Sbjct: 182 YGYTAYS---------------ASKFGIRGLAEALQQEVIGDDIHVSLIFPPDTDTPGFA 226
Query: 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQR 324
EE K+RP LT+IIAA G+MK + VAKKA +GIKSGSFI+PCN EG LLSIATAGLSPQR
Sbjct: 227 EEQKKRPELTTIIAAGGGSMKPELVAKKAFNGIKSGSFIIPCNFEGTLLSIATAGLSPQR 286
Query: 325 SVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKWHAQGKRS 364
S MAF+EVV AG+IR VALCFQW WYGSIEKWHAQ R+
Sbjct: 287 SFFMAFIEVVGAGVIRIVALCFQWVWYGSIEKWHAQRNRT 326
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297833348|ref|XP_002884556.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330396|gb|EFH60815.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/359 (61%), Positives = 269/359 (74%), Gaps = 41/359 (11%)
Query: 1 MADLS--FLGFLVLLLPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAA 58
MA +S FL FL+ ++PL++L +L LIVRP+P++IPIK RHVFITGGSSGIGLALAH+AA
Sbjct: 1 MAAISPFFLLFLIPIVPLSILAILALIVRPRPIKIPIKSRHVFITGGSSGIGLALAHRAA 60
Query: 59 KEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118
EGARVSILARS KLEEAK+ IQLATG+EVAT+SADVRD+DAV A+DE+GP+DVL+VN
Sbjct: 61 AEGARVSILARSAGKLEEAKKEIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVN 120
Query: 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178
QGVF EL S ++V+ IDVN+ GSF++IKAALP +K R++ GPASI+L+SSQAGQ
Sbjct: 121 QGVFTAKELVTHSPEDVKFTIDVNLVGSFNVIKAALPAMKARKDRGPASISLVSSQAGQV 180
Query: 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEA 238
G GY S ASKFGL+GLA+A
Sbjct: 181 ----------------------GVYGYAAYS-----------------ASKFGLQGLAQA 201
Query: 239 LQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIK 298
LQQEVIADDIHV+LIFPPDT TPG EEE K RP +T+IIAASSG+M+ +EVA+KA+DGIK
Sbjct: 202 LQQEVIADDIHVTLIFPPDTNTPGFEEEQKSRPDVTAIIAASSGSMETEEVARKAMDGIK 261
Query: 299 SGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKW 357
+G F V CN EGFLLS+AT G+SPQRS +AF+EV+ AG IR +AL FQW+WY +IEKW
Sbjct: 262 AGKFTVSCNFEGFLLSLATTGMSPQRSFWLAFLEVITAGPIRLIALFFQWDWYKAIEKW 320
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555636|ref|XP_003546136.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/339 (64%), Positives = 258/339 (76%), Gaps = 39/339 (11%)
Query: 26 VRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT 85
VRP+PV+IPIK+RHVFITGGSSGIGLALAH+AA EGARVSILARS +KLEEA+ +I+LAT
Sbjct: 26 VRPRPVKIPIKNRHVFITGGSSGIGLALAHRAAAEGARVSILARSPEKLEEARNAIRLAT 85
Query: 86 GIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITG 145
GIEVA ++ADVRDFDAVK A+D+AGP+DVL++N GVFV ELE L +V+ +DVN+ G
Sbjct: 86 GIEVAAFAADVRDFDAVKRAVDDAGPIDVLLLNHGVFVALELEKMELSDVKFTMDVNLMG 145
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY 205
+ ++IKAALP +K R + PASIAL+SSQAGQ
Sbjct: 146 TLNLIKAALPAMKNRNDPLPASIALVSSQAGQVG-------------------------- 179
Query: 206 HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
+ G + + ASKFGLRGLAEALQQEVIAD+IHVSLIFPPDT+TPGL E
Sbjct: 180 -------------IYGYVAYSASKFGLRGLAEALQQEVIADNIHVSLIFPPDTDTPGLAE 226
Query: 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRS 325
ENKR+P LT IIAASSG+MKADEVA+KALDGIK G+FIV CN EG LS+ATAGLSPQRS
Sbjct: 227 ENKRKPELTKIIAASSGSMKADEVAQKALDGIKCGNFIVSCNFEGIALSLATAGLSPQRS 286
Query: 326 VLMAFVEVVAAGLIRFVALCFQWNWYGSIEKWHAQGKRS 364
LMAF+EVVAAG++R VAL QW WYGSIEK+H+Q K S
Sbjct: 287 FLMAFLEVVAAGILRIVALGMQWTWYGSIEKYHSQRKGS 325
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224109358|ref|XP_002315170.1| predicted protein [Populus trichocarpa] gi|222864210|gb|EEF01341.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/330 (68%), Positives = 258/330 (78%), Gaps = 40/330 (12%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K RH+FITGGSSGIGLALAH+AA EGARVSIL+RS KLEEAK +I+ +TGI+VA ++AD
Sbjct: 1 KKRHIFITGGSSGIGLALAHRAASEGARVSILSRSIDKLEEAKNAIRQSTGIDVAIFAAD 60
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
VRDF+AV+ A+DEAGP+DVLVVNQGVFV ELE Q L+EVR +IDVN+ GSF+MIKAALP
Sbjct: 61 VRDFEAVQRAVDEAGPIDVLVVNQGVFVAQELEEQKLEEVRFIIDVNLMGSFNMIKAALP 120
Query: 156 LIKK-RQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
+K+ R++ GP SIALMSSQAGQ G Y T++
Sbjct: 121 GMKRSRKDRGPGSIALMSSQAGQV------------------------GIYGYTAYS--- 153
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274
ASKFGLRGLAEALQQEVI D+IHVSL+FPPDTETPGL EENKR+P+LT
Sbjct: 154 ------------ASKFGLRGLAEALQQEVIGDNIHVSLVFPPDTETPGLTEENKRKPQLT 201
Query: 275 SIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVV 334
SIIAASSGAMKADEVAKKALDGIKSGSF +PCNSEG LL+IATAGLSPQRS LMAFVEVV
Sbjct: 202 SIIAASSGAMKADEVAKKALDGIKSGSFTIPCNSEGILLAIATAGLSPQRSYLMAFVEVV 261
Query: 335 AAGLIRFVALCFQWNWYGSIEKWHAQGKRS 364
AAG++R ALCFQWNWYGSIEKWH Q R+
Sbjct: 262 AAGIVRIAALCFQWNWYGSIEKWHMQKNRT 291
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30679701|ref|NP_187257.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|110736583|dbj|BAF00257.1| hypothetical protein [Arabidopsis thaliana] gi|332640817|gb|AEE74338.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/359 (61%), Positives = 271/359 (75%), Gaps = 41/359 (11%)
Query: 1 MADLS--FLGFLVLLLPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAA 58
MA +S FL FL+ ++PL+LL +L LIVRP+P++IPIK RH FITGGSSGIGLALAH+AA
Sbjct: 1 MAAISPLFLLFLIPIIPLSLLAILALIVRPRPIKIPIKSRHAFITGGSSGIGLALAHRAA 60
Query: 59 KEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118
EGARVSILARSG KLEEAK+SIQLATG+EVAT+SADVRD+DAV A+DE+GP+DVL+VN
Sbjct: 61 SEGARVSILARSGSKLEEAKKSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVN 120
Query: 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178
QGVF EL S ++V+ IDVN+ GSF++IKAALP +K R++ GPASI+L+SSQAGQ
Sbjct: 121 QGVFTAKELVKHSPEDVKFTIDVNLVGSFNVIKAALPAMKARKDRGPASISLVSSQAGQV 180
Query: 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEA 238
G GY S ASKFGL+GLA+A
Sbjct: 181 ----------------------GVYGYAAYS-----------------ASKFGLQGLAQA 201
Query: 239 LQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIK 298
LQQEVI+DDIHV+LIFPPDT TPG EEE K RP +T+IIAASSG+M+ +EVAKKA+DGIK
Sbjct: 202 LQQEVISDDIHVTLIFPPDTNTPGFEEEQKSRPEVTAIIAASSGSMETEEVAKKAMDGIK 261
Query: 299 SGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKW 357
+G+F V CN EGFLLS+AT G+SPQRS +AF+EV+ AG IR +AL FQW+WY +IEKW
Sbjct: 262 AGNFTVSCNFEGFLLSLATTGMSPQRSFWLAFLEVITAGPIRLIALFFQWDWYKAIEKW 320
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7658344|gb|AAF66134.1| unknown protein; 15741-13972 [Arabidopsis thaliana] gi|27808568|gb|AAO24564.1| At3g06060 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/359 (61%), Positives = 271/359 (75%), Gaps = 41/359 (11%)
Query: 1 MADLS--FLGFLVLLLPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAA 58
MA +S FL FL+ ++PL+LL +L LIVRP+P++IPIK RH FITGGSSGIGLALAH+AA
Sbjct: 1 MAAISPLFLLFLIPIIPLSLLAILALIVRPRPIKIPIKSRHAFITGGSSGIGLALAHRAA 60
Query: 59 KEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118
EGARVSILARSG KLEEAK+SIQLATG+EVAT+SADVRD+DAV A+DE+GP+DVL+VN
Sbjct: 61 SEGARVSILARSGSKLEEAKKSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVN 120
Query: 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178
QGVF EL S ++V+ IDVN+ GSF++IKAALP +K R++ GPASI+L+SSQAGQ
Sbjct: 121 QGVFTAKELVKHSPEDVKFTIDVNLVGSFNVIKAALPAMKARKDRGPASISLVSSQAGQV 180
Query: 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEA 238
G GY S ASKFGL+GLA+A
Sbjct: 181 ----------------------GVYGYAAYS-----------------ASKFGLQGLAQA 201
Query: 239 LQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIK 298
LQQEVI+DDIHV+LIFPPDT TPG EEE K RP +T+IIAASSG+M+ +EVAKKA+DGIK
Sbjct: 202 LQQEVISDDIHVTLIFPPDTNTPGFEEEQKSRPEVTAIIAASSGSMETEEVAKKAMDGIK 261
Query: 299 SGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKW 357
+G+F V CN EGFLLS+AT G+SPQRS +AF+EV+ AG IR +AL FQW+WY +IEKW
Sbjct: 262 AGNFTVSCNFEGFLLSLATTGMSPQRSFWLAFLEVITAGPIRLIALFFQWDWYKAIEKW 320
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356548983|ref|XP_003542878.1| PREDICTED: 3-ketodihydrosphingosine reductase-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 269/362 (74%), Gaps = 39/362 (10%)
Query: 1 MADLSFLGFLVLLLPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKE 60
M D +F F++ LLP+ LL +LY +VRP+PV+IPIK+RHVFITGGSSGIGLALAH+AA E
Sbjct: 1 MGDANFAFFVLFLLPVFLLAVLYFLVRPRPVKIPIKNRHVFITGGSSGIGLALAHRAAAE 60
Query: 61 GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120
GARVSILARS KLEEA+ +I+LATG+EVA ++ADVRDF+AVK A+D+AGP+DVL++N G
Sbjct: 61 GARVSILARSPDKLEEARNAIRLATGMEVAAFAADVRDFEAVKRAVDDAGPIDVLLLNHG 120
Query: 121 VFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180
VFV EL+ L EV+ +DVN+ G+ ++IKAALP +K R + PASIAL+SSQAGQ
Sbjct: 121 VFVALELDKMELSEVKFTMDVNLMGTLNLIKAALPAMKNRNDPLPASIALVSSQAGQVG- 179
Query: 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQ 240
+ G + + ASKFGLRGLAE+LQ
Sbjct: 180 --------------------------------------IYGYVAYSASKFGLRGLAESLQ 201
Query: 241 QEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG 300
QEVI D+IHVS+IFPPDT+TPGL EENKRRP LT II ASSG+MKADEVA+KALDGIK G
Sbjct: 202 QEVIEDNIHVSMIFPPDTDTPGLAEENKRRPELTKIITASSGSMKADEVAQKALDGIKCG 261
Query: 301 SFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKWHAQ 360
FIV CN EG LS+ATAGLSPQRS LMAF+EVVAAG++R VAL QW WY SIEK+H+Q
Sbjct: 262 DFIVSCNFEGIALSLATAGLSPQRSFLMAFLEVVAAGILRIVALGMQWTWYRSIEKYHSQ 321
Query: 361 GK 362
K
Sbjct: 322 RK 323
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356548985|ref|XP_003542879.1| PREDICTED: 3-ketodihydrosphingosine reductase-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/364 (61%), Positives = 270/364 (74%), Gaps = 39/364 (10%)
Query: 1 MADLSFLGFLVLLLPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKE 60
M D +F F++ LLP+ LL +LY +VRP+PV+IPIK+RHVFITGGSSGIGLALAH+AA E
Sbjct: 1 MGDANFAFFVLFLLPVFLLAVLYFLVRPRPVKIPIKNRHVFITGGSSGIGLALAHRAAAE 60
Query: 61 GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120
GARVSILARS KLEEA+ +I+LATG+EVA ++ADVRDF+AVK A+D+AGP+DVL++N G
Sbjct: 61 GARVSILARSPDKLEEARNAIRLATGMEVAAFAADVRDFEAVKRAVDDAGPIDVLLLNHG 120
Query: 121 VFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180
VFV EL+ L EV+ +DVN+ G+ ++IKAALP +K R + PASIAL+SSQAGQ
Sbjct: 121 VFVALELDKMELSEVKFTMDVNLMGTLNLIKAALPAMKNRNDPLPASIALVSSQAGQVG- 179
Query: 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQ 240
+ G + + ASKFGLRGLAE+LQ
Sbjct: 180 --------------------------------------IYGYVAYSASKFGLRGLAESLQ 201
Query: 241 QEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG 300
QEVI D+IHVS+IFPPDT+TPGL EENKRRP LT II ASSG+MKADEVA+KALDGIK G
Sbjct: 202 QEVIEDNIHVSMIFPPDTDTPGLAEENKRRPELTKIITASSGSMKADEVAQKALDGIKCG 261
Query: 301 SFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYGSIEKWHAQ 360
FIV CN EG LS+ATAGLSPQRS LMAF+EVVAAG++R VAL QW WY SIEK+H+Q
Sbjct: 262 DFIVSCNFEGIALSLATAGLSPQRSFLMAFLEVVAAGILRIVALGMQWTWYRSIEKYHSQ 321
Query: 361 GKRS 364
K S
Sbjct: 322 RKGS 325
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 366 | ||||||
| TAIR|locus:2080379 | 326 | TSC10A "TSC10A" [Arabidopsis t | 0.418 | 0.469 | 0.725 | 2.1e-107 | |
| TAIR|locus:2182192 | 331 | TSC10B "TSC10B" [Arabidopsis t | 0.418 | 0.462 | 0.738 | 4.6e-103 | |
| UNIPROTKB|Q06136 | 332 | KDSR "3-ketodihydrosphingosine | 0.418 | 0.460 | 0.359 | 8.6e-45 | |
| UNIPROTKB|F1NJB4 | 332 | KDSR "Uncharacterized protein" | 0.418 | 0.460 | 0.372 | 8.6e-45 | |
| ZFIN|ZDB-GENE-040426-853 | 359 | kdsr "3-ketodihydrosphingosine | 0.363 | 0.370 | 0.406 | 8.6e-45 | |
| UNIPROTKB|F1SMW5 | 332 | KDSR "Uncharacterized protein" | 0.412 | 0.454 | 0.370 | 7.6e-44 | |
| RGD|1307775 | 332 | Kdsr "3-ketodihydrosphingosine | 0.409 | 0.451 | 0.373 | 9.6e-44 | |
| MGI|MGI:1918000 | 332 | Kdsr "3-ketodihydrosphingosine | 0.363 | 0.400 | 0.406 | 9.6e-44 | |
| UNIPROTKB|F1MLE5 | 321 | KDSR "3-ketodihydrosphingosine | 0.363 | 0.414 | 0.390 | 6.7e-43 | |
| UNIPROTKB|Q2KIJ5 | 331 | KDSR "3-ketodihydrosphingosine | 0.360 | 0.398 | 0.390 | 6.7e-43 |
| TAIR|locus:2080379 TSC10A "TSC10A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 566 (204.3 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 111/153 (72%), Positives = 134/153 (87%)
Query: 25 IVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA 84
IVRP+P++IPIK RH FITGGSSGIGLALAH+AA EGARVSILARSG KLEEAK+SIQLA
Sbjct: 27 IVRPRPIKIPIKSRHAFITGGSSGIGLALAHRAASEGARVSILARSGSKLEEAKKSIQLA 86
Query: 85 TGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIT 144
TG+EVAT+SADVRD+DAV A+DE+GP+DVL+VNQGVF EL S ++V+ IDVN+
Sbjct: 87 TGVEVATFSADVRDYDAVSKAIDESGPIDVLIVNQGVFTAKELVKHSPEDVKFTIDVNLV 146
Query: 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
GSF++IKAALP +K R++ GPASI+L+SSQAGQ
Sbjct: 147 GSFNVIKAALPAMKARKDRGPASISLVSSQAGQ 179
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| TAIR|locus:2182192 TSC10B "TSC10B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 565 (203.9 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 113/153 (73%), Positives = 135/153 (88%)
Query: 25 IVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA 84
IVRP+ V IPIK RHVFITGGSSGIGLALAH+A EGA+VSILARS +KL EAK+SIQLA
Sbjct: 25 IVRPRSVTIPIKFRHVFITGGSSGIGLALAHRAVSEGAKVSILARSTEKLAEAKRSIQLA 84
Query: 85 TGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIT 144
TG+EVAT+SADVRD+DAV A+DE+GP+DVL+VNQGVF+ ELE QS +EV+ MIDVN+T
Sbjct: 85 TGVEVATFSADVRDYDAVSKAIDESGPIDVLIVNQGVFIGKELEKQSPEEVKFMIDVNLT 144
Query: 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
GSF++IKAALP +K R+ GPASI+L+SSQAGQ
Sbjct: 145 GSFNVIKAALPAMKAREGRGPASISLVSSQAGQ 177
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| UNIPROTKB|Q06136 KDSR "3-ketodihydrosphingosine reductase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 270 (100.1 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 55/153 (35%), Positives = 92/153 (60%)
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+GQ L G + ASKF +RGLAEALQ EV ++++++ +PPDT+TPG EEN+ +P
Sbjct: 175 AGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYNVYITVAYPPDTDTPGFAEENRTKPLE 234
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333
T +I+ ++ K ++VAK+ + G+F S+G++LS T G++P S+ +V
Sbjct: 235 TRLISETTSVCKPEQVAKQIVKDAIQGNFNSSLGSDGYMLSALTCGMAPVTSITEGLQQV 294
Query: 334 VAAGLIRFVALCFQWNWYGSIEKWHAQGKRSGN 366
V GL R +AL + ++ + + Q ++S N
Sbjct: 295 VTMGLFRTIALFYLGSFDSIVRRCMMQREKSEN 327
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| UNIPROTKB|F1NJB4 KDSR "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 269 (99.8 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 57/153 (37%), Positives = 92/153 (60%)
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+GQ L G + +KF LRGLAEALQ EV +I+V++ +PPDT+TPG EE+K +P
Sbjct: 175 AGQLGLFGYTAYSPTKFALRGLAEALQMEVKPYNIYVTVAYPPDTDTPGFAEESKTKPLE 234
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333
T +I+ +S +A++VA+ + G+F S+G++LSI T+G+SP S+ +V
Sbjct: 235 TKLISETSSVCQAEQVARVIVKDAIQGNFNSSVGSDGYMLSILTSGMSPVTSITEGLQQV 294
Query: 334 VAAGLIRFVALCFQWNWYGSIEKWHAQGKRSGN 366
V G+ R V L + ++ + + Q ++S N
Sbjct: 295 VCMGIFRIVGLFYLGSFDSIVRRCMMQREKSEN 327
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| ZFIN|ZDB-GENE-040426-853 kdsr "3-ketodihydrosphingosine reductase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 264 (98.0 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 54/133 (40%), Positives = 81/133 (60%)
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+GQ L G + SKF LRGLAEALQ E+ +I+V++ +PPDT+TPG EENK +P
Sbjct: 202 AGQIGLFGYTAYSPSKFALRGLAEALQMEMKPYNIYVTVAYPPDTDTPGFAEENKTKPLE 261
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333
T +I+ +SG + ++VAK + G+F +G++LS T G+SP S+ ++
Sbjct: 262 TKLISETSGVSQPEQVAKIVVKDAVQGNFTSSFGPDGYMLSALTCGMSPVTSITEGLQQI 321
Query: 334 VAAGLIRFVALCF 346
V GL R +AL +
Sbjct: 322 VTMGLFRTIALFY 334
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| UNIPROTKB|F1SMW5 KDSR "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 56/151 (37%), Positives = 90/151 (59%)
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+GQ L G + +SKF +RGLAEALQ EV +++V++ +PPDT+TPG EENK +P
Sbjct: 175 AGQLGLFGFTAYSSSKFAIRGLAEALQMEVKPYNVYVTVAYPPDTDTPGFAEENKTKPLE 234
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333
T +I+ ++ K ++VAK+ + G+F S+G++LS T G++P S+ +V
Sbjct: 235 TRLISETTSVCKPEQVAKQIVKDAIQGNFNSSIGSDGYMLSSLTCGMAPVTSITEGLQQV 294
Query: 334 VAAGLIRFVALCFQWNWYGSIEKWHAQGKRS 364
V GL R +AL + ++ + + Q RS
Sbjct: 295 VTMGLFRTIALFYLGSFDSIVRRCMMQRARS 325
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| RGD|1307775 Kdsr "3-ketodihydrosphingosine reductase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 269 (99.8 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 56/150 (37%), Positives = 91/150 (60%)
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+GQ L G + +SKF +RGLAEALQ EV +++V++ +PPDT+TPGL EENK +P
Sbjct: 175 AGQLGLFGFTAYSSSKFAIRGLAEALQMEVKPYNVYVTVAYPPDTDTPGLAEENKTKPLE 234
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333
T +I+ ++ K ++VAK+ + G+F S+G++LS T G++P S+ +V
Sbjct: 235 TRLISETTAVCKPEQVAKQIVKDAIQGNFNSSIGSDGYMLSSLTCGMAPVTSITEGLQQV 294
Query: 334 VAAGLIRFVALCFQWNWYGSIEKWHAQGKR 363
V GL R +AL + ++ I + Q ++
Sbjct: 295 VTMGLFRTIALFYLGSFDNIIRRCMVQKRK 324
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| MGI|MGI:1918000 Kdsr "3-ketodihydrosphingosine reductase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 266 (98.7 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 54/133 (40%), Positives = 84/133 (63%)
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+GQ L G + +SKF +RGLAEALQ EV +++V++ +PPDT+TPGL EENK +P
Sbjct: 175 AGQLGLFGFTAYSSSKFAIRGLAEALQMEVKPYNVYVTVAYPPDTDTPGLAEENKTKPLE 234
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333
T +I+ ++ K ++VAK+ + G+F S+G++LS T G++P S+ +V
Sbjct: 235 TRLISETTAICKPEQVAKQIVKDAIQGNFNSSIGSDGYMLSSLTCGMAPVTSITEGLQQV 294
Query: 334 VAAGLIRFVALCF 346
V GL R +AL +
Sbjct: 295 VTMGLFRTIALFY 307
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| UNIPROTKB|F1MLE5 KDSR "3-ketodihydrosphingosine reductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 261 (96.9 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 52/133 (39%), Positives = 84/133 (63%)
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+GQ L G + +SKF LRGLAEALQ EV +++V++ +PPDT+TPG +EN+ +P
Sbjct: 164 AGQLGLFGYTAYSSSKFALRGLAEALQMEVKPYNVYVTVAYPPDTDTPGFAKENQTKPLE 223
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333
T +I+ ++ K ++VAK+ + G+F S+G++LS T G++P S++ +V
Sbjct: 224 TRLISETTSVCKPEQVAKQIVKDAVQGNFNSSIGSDGYMLSSLTCGMAPVTSIMEGLQQV 283
Query: 334 VAAGLIRFVALCF 346
V GL R +AL +
Sbjct: 284 VTMGLFRTIALFY 296
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| UNIPROTKB|Q2KIJ5 KDSR "3-ketodihydrosphingosine reductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 259 (96.2 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 52/133 (39%), Positives = 86/133 (64%)
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+GQ L G + +SKF LRGLAEALQ EV +++V++ +PPDT+TPG +EN+ +P
Sbjct: 175 AGQLGLFGYTAYSSSKFALRGLAEALQMEVKPYNVYVTVAYPPDTDTPGFAKENQTKPLE 234
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333
T +I+ ++ K ++VAK+ + ++ G+F S+G++LS T G++P S++ +V
Sbjct: 235 TRLISETTSVCKPEQVAKQIVKDVQ-GNFNSSIGSDGYMLSSLTCGMAPVTSIMEGLQQV 293
Query: 334 VAAGLIRFVALCF 346
V GL R +AL +
Sbjct: 294 VTMGLFRTIALFY 306
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q2KIJ5 | KDSR_BOVIN | 1, ., 1, ., 1, ., 1, 0, 2 | 0.3005 | 0.8087 | 0.8942 | yes | no |
| Q06136 | KDSR_HUMAN | 1, ., 1, ., 1, ., 1, 0, 2 | 0.3114 | 0.8142 | 0.8975 | yes | no |
| Q6GV12 | KDSR_MOUSE | 1, ., 1, ., 1, ., 1, 0, 2 | 0.3249 | 0.8087 | 0.8915 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | LOW CONFIDENCE prediction! |
| 4th Layer | 1.1.1.102 | 0.824 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | fgenesh2_kg.3__608__AT3G06060.1 | annotation not avaliable (326 aa) | |||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | fgenesh2_kg.5__762__AT3G42960.1 | annotation not avaliable (272 aa) | • | 0.407 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 366 | |||
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 4e-76 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 2e-42 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 5e-36 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 6e-35 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 2e-33 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 2e-31 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 2e-31 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 9e-31 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-29 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 2e-28 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 3e-28 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 6e-28 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 1e-27 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 2e-27 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-26 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 2e-25 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 2e-25 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 7e-25 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 1e-24 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-24 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 7e-24 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 3e-23 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 5e-23 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 9e-23 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 2e-22 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 3e-22 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 4e-22 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 6e-22 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 1e-21 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 2e-21 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 2e-21 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 2e-21 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-21 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 3e-21 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 3e-21 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 4e-21 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 7e-21 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 8e-21 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 1e-20 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 1e-20 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 1e-20 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 2e-20 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 3e-20 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 4e-20 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 6e-20 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 7e-20 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 1e-19 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-19 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 2e-19 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 2e-19 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 3e-19 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 3e-19 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 4e-19 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 1e-18 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 1e-18 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 1e-18 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 2e-18 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 2e-18 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 2e-18 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 2e-18 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 2e-18 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 3e-18 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 4e-18 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 5e-18 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 7e-18 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 7e-18 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 8e-18 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 2e-17 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 3e-17 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 3e-17 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 3e-17 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 3e-17 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 5e-17 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 5e-17 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 6e-17 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 6e-17 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 7e-17 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 7e-17 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 7e-17 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 7e-17 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 2e-16 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 2e-16 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 3e-16 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 4e-16 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 5e-16 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 5e-16 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 6e-16 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 7e-16 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 7e-16 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 9e-16 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 9e-16 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 9e-16 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 1e-15 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 1e-15 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 2e-15 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 2e-15 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 2e-15 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 3e-15 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 4e-15 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 4e-15 | |
| TIGR03325 | 262 | TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3- | 4e-15 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 5e-15 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 6e-15 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 7e-15 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 1e-14 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 1e-14 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 2e-14 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 2e-14 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 2e-14 | |
| cd05373 | 238 | cd05373, SDR_c10, classical (c) SDR, subgroup 10 | 3e-14 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 3e-14 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 4e-14 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 5e-14 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 6e-14 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 6e-14 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 7e-14 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 8e-14 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 8e-14 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 1e-13 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 2e-13 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 2e-13 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 2e-13 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 2e-13 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 2e-13 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 3e-13 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 3e-13 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 3e-13 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 3e-13 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 4e-13 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 6e-13 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 7e-13 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 9e-13 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 1e-12 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 1e-12 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 2e-12 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-12 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 2e-12 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 3e-12 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 4e-12 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 6e-12 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 8e-12 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 9e-12 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 1e-11 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 1e-11 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 1e-11 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 2e-11 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 3e-11 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 3e-11 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 4e-11 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 5e-11 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 6e-11 | |
| cd11730 | 206 | cd11730, Tthb094_like_SDR_c, Tthb094 and related p | 1e-10 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 1e-10 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 2e-10 | |
| cd09810 | 311 | cd09810, LPOR_like_SDR_c_like, light-dependent pro | 2e-10 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 2e-10 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 2e-10 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 3e-10 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 5e-10 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 5e-10 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 5e-10 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 6e-10 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 9e-10 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 1e-09 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 1e-09 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-09 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 1e-09 | |
| PRK07102 | 243 | PRK07102, PRK07102, short chain dehydrogenase; Pro | 1e-09 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 2e-09 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 2e-09 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 2e-09 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 2e-09 | |
| PRK12938 | 246 | PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro | 2e-09 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 3e-09 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 3e-09 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 4e-09 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 4e-09 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 4e-09 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-09 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 5e-09 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 5e-09 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 5e-09 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 6e-09 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 6e-09 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 7e-09 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 8e-09 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 9e-09 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 9e-09 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 1e-08 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 1e-08 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 2e-08 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 2e-08 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 3e-08 | |
| PRK05854 | 313 | PRK05854, PRK05854, short chain dehydrogenase; Pro | 4e-08 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 7e-08 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 8e-08 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 9e-08 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 1e-07 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 1e-07 | |
| PRK08339 | 263 | PRK08339, PRK08339, short chain dehydrogenase; Pro | 1e-07 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 1e-07 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 2e-07 | |
| cd05274 | 375 | cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt | 2e-07 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 2e-07 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 3e-07 | |
| cd09808 | 255 | cd09808, DHRS-12_like_SDR_c-like, human dehydrogen | 4e-07 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 5e-07 | |
| PRK07904 | 253 | PRK07904, PRK07904, short chain dehydrogenase; Pro | 5e-07 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 6e-07 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 7e-07 | |
| PLN02780 | 320 | PLN02780, PLN02780, ketoreductase/ oxidoreductase | 8e-07 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 9e-07 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 1e-06 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 1e-06 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 2e-06 | |
| PRK07806 | 248 | PRK07806, PRK07806, short chain dehydrogenase; Pro | 2e-06 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-06 | |
| PRK07453 | 322 | PRK07453, PRK07453, protochlorophyllide oxidoreduc | 2e-06 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 3e-06 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 6e-06 | |
| cd05322 | 257 | cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy | 8e-06 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 8e-06 | |
| cd08951 | 260 | cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 | 1e-05 | |
| PRK06197 | 306 | PRK06197, PRK06197, short chain dehydrogenase; Pro | 1e-05 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 1e-05 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 2e-05 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 2e-05 | |
| cd08955 | 376 | cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase ( | 3e-05 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 3e-05 | |
| TIGR01289 | 314 | TIGR01289, LPOR, light-dependent protochlorophylli | 6e-05 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 7e-05 | |
| PLN00015 | 308 | PLN00015, PLN00015, protochlorophyllide reductase | 7e-05 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 7e-05 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 8e-05 | |
| cd01078 | 194 | cd01078, NAD_bind_H4MPT_DH, NADP binding domain of | 1e-04 | |
| PRK08017 | 256 | PRK08017, PRK08017, oxidoreductase; Provisional | 1e-04 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 1e-04 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 2e-04 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 2e-04 | |
| PRK06953 | 222 | PRK06953, PRK06953, short chain dehydrogenase; Pro | 2e-04 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 3e-04 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 3e-04 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 3e-04 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 3e-04 | |
| cd08954 | 452 | cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase ( | 3e-04 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 4e-04 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 5e-04 | |
| PRK06101 | 240 | PRK06101, PRK06101, short chain dehydrogenase; Pro | 8e-04 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 8e-04 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 0.001 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 0.001 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 0.002 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 0.003 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 0.003 | |
| cd09809 | 284 | cd09809, human_WWOX_like_SDR_c-like, human WWOX (W | 0.003 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 0.003 | |
| PRK12744 | 257 | PRK12744, PRK12744, short chain dehydrogenase; Pro | 0.003 | |
| PRK09134 | 258 | PRK09134, PRK09134, short chain dehydrogenase; Pro | 0.004 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 4e-76
Identities = 107/281 (38%), Positives = 150/281 (53%), Gaps = 49/281 (17%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ---LATGIEVATYS 93
+HV ITGGSSGIG ALA + KEGA V I+ARS KLEEA + I+ A+G +V+ S
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
AD+ D++ V+ A +A GP D++V G+ +PG E + +E +DVN GS ++
Sbjct: 61 ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
A LPL+K+++ P I +SSQA G GY
Sbjct: 121 AHAVLPLMKEQR---PGHIVFVSSQAALV----------------------GIYGY---- 151
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269
+C SKF LRGLAE+L+QE+ +I VS+++PPDT+TPG EEENK
Sbjct: 152 -----SAYC--------PSKFALRGLAESLRQELKPYNIRVSVVYPPDTDTPGFEEENKT 198
Query: 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEG 310
+P T I SSG + +E A+ + G+ G V + G
Sbjct: 199 KPEETKAIEGSSGPITPEEAARIIVKGLDRGYDDVFTDFIG 239
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 2e-42
Identities = 74/256 (28%), Positives = 109/256 (42%), Gaps = 49/256 (19%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG SSGIG A+A + A+EGA+V + R+ + L E L G ADV D
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEAL--GGNAVAVQADVSDE 58
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+ V+ ++EA G +D+LV N G+ PG LE + ++ ++DVN+TG F + +AALP
Sbjct: 59 EDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+KK+ G I +SS AG + G +
Sbjct: 119 HMKKQGGG---RIVNISSVAGL----------------------RPLPGQAAYA------ 147
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275
ASK L GL +L E+ I V+ + P +TP L +
Sbjct: 148 -----------ASKAALEGLTRSLALELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKEL 196
Query: 276 IIAASSG-AMKADEVA 290
A G +EVA
Sbjct: 197 AAAIPLGRLGTPEEVA 212
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 5e-36
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 51/277 (18%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
P+K + ITG SSGIG LA Q A+ G + ++AR KLE + ++ TG+EV
Sbjct: 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIP 62
Query: 94 ADVRDFDAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
AD+ D +A++ DE GP+DVLV N G G SLDE MI +NI +
Sbjct: 63 ADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRL 122
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
KA LP + +R G I + S AG Y
Sbjct: 123 TKAVLPGMVERGAGH---IINIGSAAG-------------------LIPTPYMAVYS--- 157
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269
A+K + +EAL++E+ + V+ + P T T + +
Sbjct: 158 -----------------ATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSD 200
Query: 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSG-SFIVP 305
L+ + ++VA+ AL ++ G I+P
Sbjct: 201 VYLLSPGEL----VLSPEDVAEAALKALEKGKREIIP 233
|
Length = 265 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 6e-35
Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + ITG SSGIG A A A+ GA+V + AR ++LE I + +A
Sbjct: 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALAL--- 60
Query: 95 DVRDFDAVKTAL----DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D AV+ A+ +E G +D+LV N G+ + L+ LD+ MID N+ G +
Sbjct: 61 DVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGT 120
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+A LP + +R++G I + S AG+ G Y
Sbjct: 121 RAVLPGMVERKSG---HIINLGSIAGR-------------------YPYPGGAVYG---- 154
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
A+K +R + L+QE+ I V++I P
Sbjct: 155 ----------------ATKAAVRAFSLGLRQELAGTGIRVTVISP 183
|
Length = 246 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 2e-33
Identities = 78/225 (34%), Positives = 104/225 (46%), Gaps = 49/225 (21%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + ITGGS GIG A+A EG +V+I AR K+LEEA +L V +A
Sbjct: 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAA--ELNNKGNVLGLAA 61
Query: 95 DVRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DVRD AV + G +DVL+ N GV +E + +E RL+ID N+TG+F+ I
Sbjct: 62 DVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTI 121
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
KAA+P +K+ GG I +SS AG N G Y+
Sbjct: 122 KAAVPALKR--GGG--YIINISSLAG-----TNFFAGG--------------AAYN---- 154
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
ASKFGL G +EA ++ I VS I P
Sbjct: 155 ----------------ASKFGLVGFSEAAMLDLRQYGIKVSTIMP 183
|
Length = 237 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-31
Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 46/237 (19%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
++ R +TG + GIG A+A + A +GA V ++ G + ++ A G +
Sbjct: 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE-AAGGKARARQ 61
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DVRD A+K A+ G +D+LV N G+F ++ +IDVN+TG+F +
Sbjct: 62 VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLL 121
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
+AALP + R GG I L SS AG G+ G
Sbjct: 122 TQAALPAL-IRAGGG--RIVLTSSVAG---------------------PRVGYPG----- 152
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266
L+ + ASK GL G AL E+ A +I V+ + P +TP
Sbjct: 153 ---LAH---------YAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL 197
|
Length = 251 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 2e-31
Identities = 77/271 (28%), Positives = 109/271 (40%), Gaps = 56/271 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG--KKLEEAKQSIQLATGIEVATY 92
+ + +TG SSGIG A+A A+EGARV + AR + E +I+ A G A
Sbjct: 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62
Query: 93 SADVRDF-----DAVKTALDEAGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGS 146
+ADV D V A +E G +D+LV N G+ P LE + ++ +IDVN+ G+
Sbjct: 63 AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGA 122
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYH 206
F + +AALPL+KK+ I +SS AG G Y
Sbjct: 123 FLLTRAALPLMKKQ------RIVNISSVAGLGGPP-------------------GQAAYA 157
Query: 207 VTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266
ASK L GL +AL E+ I V+ + P +TP
Sbjct: 158 --------------------ASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAAL 197
Query: 267 NKRRPRLTSIIAASSGA---MKADEVAKKAL 294
+AA +EVA
Sbjct: 198 ESAELEALKRLAARIPLGRLGTPEEVAAAVA 228
|
Length = 251 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 9e-31
Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 55/267 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG S GIG A+A + A +GA+V I + + E ++ A G E D
Sbjct: 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELR-AAGGEARVLVFD 62
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D AV+ ++ A G +D+LV N G+ L S ++ +IDVN+TG+F++++
Sbjct: 63 VSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVR 122
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
AALP + K + G I +SS +G VT
Sbjct: 123 AALPPMIKARYG---RIVNISSVSG------------------------------VTGNP 149
Query: 212 ELSGQ--FCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE--EN 267
GQ + A+K G+ G +AL E+ + I V+ + P +T E E
Sbjct: 150 ---GQTNYS--------AAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEE 198
Query: 268 KRRPRLTSIIAASSGAMKADEVAKKAL 294
+ L I G + +EVA
Sbjct: 199 VKAEILKEIPLGRLG--QPEEVANAVA 223
|
Length = 246 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (281), Expect = 8e-29
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 9/144 (6%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADV 96
R +TG + G+G A+A + A+ GA V + RS + EE ++++ A G ADV
Sbjct: 7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVE-ALGRRAQAVQADV 65
Query: 97 RDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
D A++ A+ A G +D+LV N G+F L S DE +IDVN++G FH+++A
Sbjct: 66 TDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRA 125
Query: 153 ALPLIKKRQNGGPASIALMSSQAG 176
+P ++K++ G I +SS AG
Sbjct: 126 VVPPMRKQRGG---RIVNISSVAG 146
|
Length = 249 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-28
Identities = 68/231 (29%), Positives = 97/231 (41%), Gaps = 49/231 (21%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITG SSGIG A A A+ GA+V + ARS + L E + ++ G E ADV D
Sbjct: 3 VVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVR-ELGGEAIAVVADVADA 61
Query: 100 DAVK----TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
V+ TA++ G +D V N GV V G E + +E R + DVN G + AALP
Sbjct: 62 AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALP 121
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+++R G ++ + S GY +
Sbjct: 122 HLRRRGGG---ALINVGSL----------------------------LGYRSAPLQ---A 147
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIAD--DIHVSLIFPPDTETPGLE 264
+ ASK +RG E+L+ E+ D I V+L+ P TP
Sbjct: 148 AYS--------ASKHAVRGFTESLRAELAHDGAPISVTLVQPTAMNTPFFG 190
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 3e-28
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 49/234 (20%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
PI + V ITG S+G+G A A A+ GA+V +LAR + LE I+ A G E
Sbjct: 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIR-AAGGEALAVV 63
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
ADV D +AV+ A D A GP+D V N V V G E + +E R + +V G H
Sbjct: 64 ADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHG 123
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
AAL ++ R + G +I + S + I
Sbjct: 124 TLAALRHMRPR-DRG--AIIQVGSALAY---------RSI-------------------- 151
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD--DIHVSLIFPPDTETP 261
L +C A+K +RG ++L+ E++ D + V+++ PP TP
Sbjct: 152 --PLQSAYC--------AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTP 195
|
Length = 334 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 6e-28
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 53/271 (19%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ + V ITG SSGIG LA+ A+ GAR+ + AR ++LEE K
Sbjct: 1 LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60
Query: 95 DVRDF----DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+ D V+ AL G +D+L+ N G+ + S+D R +++VN G +
Sbjct: 61 DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALT 120
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
KAALP + +R G SI ++SS A
Sbjct: 121 KAALPHLIERSQG---SIVVVSSIA----------------------------------- 142
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP----DTETPGLEEE 266
G+ + + ASK L+G ++L+ E+ +I V+++ P + L +
Sbjct: 143 ----GKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVTVVCPGLIDTNIAMNALSGD 198
Query: 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGI 297
++ A M +E A + L I
Sbjct: 199 GSMSAKMDDTTA---NGMSPEECALEILKAI 226
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-27
Identities = 78/278 (28%), Positives = 116/278 (41%), Gaps = 64/278 (23%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITG SSGIGLALA A +G RV AR+ KLE + L +EV DV D
Sbjct: 3 VLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGEL--LNDNLEV--LELDVTDE 58
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+++K A+ E G +DVLV N G + G LE S++EVR + +VN+ G + +A LP
Sbjct: 59 ESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLP 118
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
L++K+ +G I +SS G T + G
Sbjct: 119 LMRKQGSG---RIVNVSS----------------------------VAGLVPTPFL---G 144
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLI---------FPPDTETPGLEEE 266
+C ASK L L+E+L+ E+ I V++I + + E
Sbjct: 145 PYC--------ASKAALEALSESLRLELAPFGIKVTIIEPGPVRTGFADNAAGSALEDPE 196
Query: 267 NK-----RRPRLTSIIAASSGAMKADEVAKKALDGIKS 299
R+ + S ++VA + + S
Sbjct: 197 ISPYAPERKEIKENAAGVGSNPGDPEKVADVIVKALTS 234
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 2e-27
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K + FITGG +GIG A+A A+ GA V+I R + LE A + I ATG D
Sbjct: 2 KGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCD 61
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
VRD +AV+ A+DE G +D+L+ N E S + + +ID+++ G+F+ K
Sbjct: 62 VRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTK 121
Query: 152 AALPLIKKRQNGG 164
A + + ++GG
Sbjct: 122 AVGKRLIEAKHGG 134
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 2e-26
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 47/225 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ ++ ITG GIG A+A AKEG V +LAR+ + L+ + ++ A G++V +A
Sbjct: 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVE-AYGVKVVIATA 63
Query: 95 DVRDFDAVKTAL----DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D++ V A+ +E G +D+L+ N G+ G+ E +I VN+ G ++
Sbjct: 64 DVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYAT 123
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+A LP + +RQ+G I +SS AGQ G VTS
Sbjct: 124 RAVLPSMIERQSG---DIINISSTAGQ-------------------------KGAAVTS- 154
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
+ ASKFG+ GL E+L QEV +I V+ + P
Sbjct: 155 -------------AYSASKFGVLGLTESLMQEVRKHNIRVTALTP 186
|
Length = 239 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 2e-25
Identities = 64/225 (28%), Positives = 94/225 (41%), Gaps = 47/225 (20%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-- 98
+TG SSGIG A A A EGA V+I AR +LE ++ A G + DV D
Sbjct: 7 LVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELE-AEGGKALVLELDVTDEQ 65
Query: 99 --FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
AV+ ++ G +D+LV N G+ + G +E + MID N+ G + AALP
Sbjct: 66 QVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTHAALPH 125
Query: 157 IKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQ 216
R G +I +SS AG+ + + Y+
Sbjct: 126 HLLRNKG---TIVNISSVAGR-------------------VAVRNSAVYN---------- 153
Query: 217 FCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
A+KFG+ +E L+QEV + V +I P +T
Sbjct: 154 ----------ATKFGVNAFSEGLRQEVTERGVRVVVIEPGTVDTE 188
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 2e-25
Identities = 74/271 (27%), Positives = 109/271 (40%), Gaps = 60/271 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSADVRD 98
V ITG SSGIG ALA + AK G V++ AR +L+E K + +EV DV D
Sbjct: 1 VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEIL--DVTD 58
Query: 99 FDAVKTAL----DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
+ + + E G +D++++N GV L S R ID N+ G+ +++AAL
Sbjct: 59 EERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAAL 118
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
P + + G + L+SS A +
Sbjct: 119 PQFRAKGRGH---LVLISSVAA------------------------------LRGLP--- 142
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274
G + ASK L LAE+L+ +V I V++I P +TP L P L
Sbjct: 143 ------GAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGFIDTP-LTANMFTMPFLM 195
Query: 275 SIIAASSGAMKADEVAKKALDGIKSGSFIVP 305
S+ A AK+ IK G+
Sbjct: 196 SVEQA----------AKRIYKAIKKGAAEPT 216
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 7e-25
Identities = 69/220 (31%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100
ITG SSG G ALA A G RV RS E A+ + DV DFD
Sbjct: 8 LITGVSSGFGRALAQAALAAGHRVVGTVRS----EAARADFEALHPDRALARLLDVTDFD 63
Query: 101 AVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
A+ + +A GP+DVLV N G G +E L E+R +VN+ G+ M KA LP
Sbjct: 64 AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPG 123
Query: 157 IKKRQNGGPASIALMSSQAGQCWTIKN-TNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
++ R+ G I N T+M G+ + G G Y
Sbjct: 124 MRARRRG----------------HIVNITSMGGL-------ITMPGIGYYC--------- 151
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
SKF L G++E+L +EV IHV+ + P
Sbjct: 152 -----------GSKFALEGISESLAKEVAPFGIHVTAVEP 180
|
Length = 277 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 1e-24
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 51/236 (21%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+ +TG S GIG+ +A A++G RVS+ R+ + L S +E Y D R
Sbjct: 1 KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGG---DVEAVPY--DAR 55
Query: 98 DFDA----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D + V D G +DVLV N G+ P L S E+ +N+ + +A
Sbjct: 56 DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRAL 115
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
LP +++ +G + ++S +G+ + G S
Sbjct: 116 LPALREAGSG---RVVFLNSLSGK----------------------RVLAGNAGYS---- 146
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269
ASKF LR LA AL+QE + VS + P +TP +
Sbjct: 147 -------------ASKFALRALAHALRQEGWDHGVRVSAVCPGFVDTPMAQGLTLV 189
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-24
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ + +TG S GIG A+A + A +GA V I S + EA + A G +
Sbjct: 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQG 62
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D ++V+ A+DEA G VD+LV N G+ L ++ +ID N+TG F++
Sbjct: 63 DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLT 122
Query: 151 KAALPLIKKRQNG---GPASIALMSSQAGQC 178
KA + K+++G +S+ + GQ
Sbjct: 123 KAVARPMMKQRSGRIINISSVVGLMGNPGQA 153
|
Length = 248 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 98.0 bits (244), Expect = 7e-24
Identities = 70/225 (31%), Positives = 96/225 (42%), Gaps = 50/225 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG S GIG A A EG RV I AR +L A V + DVRD
Sbjct: 3 ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAA----QELEGVLGLAGDVRDE 58
Query: 100 DAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
V+ A+D G +D LV N GV V +E + +E RL++D N+TG+F+ I A P
Sbjct: 59 ADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+ +R G +I + S AG KN + KG Y+
Sbjct: 119 ALLRRGGG---TIVNVGSLAG-----KN--------------AFKGGAAYN--------- 147
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
ASKFGL GL+EA ++ +I V + P +T
Sbjct: 148 -----------ASKFGLLGLSEAAMLDLREANIRVVNVMPGSVDT 181
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 94.5 bits (236), Expect = 3e-23
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKK--LEEAKQSIQLATGIEVATYSA 94
V ITGG+ G+GLALA A EGAR +L R G E ++ A G EV +
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELE-ALGAEVTVAAC 59
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D DA+ L GP+D +V N GV G LE + + ++ +TG++++
Sbjct: 60 DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLH 119
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
+ L + L SS AG
Sbjct: 120 ELTRDL-------DLGAFVLFSSVAG 138
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.6 bits (241), Expect = 5e-23
Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 8/143 (5%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
++V + GG+SGI L +A A+ GA V++ +RS +K++ A +Q G E SADVR
Sbjct: 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQ-QAGPEGLGVSADVR 68
Query: 98 DFDAVKTAL----DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D+ AV+ A DE GP+DVLV P S + + ++D+++ G+F+++KAA
Sbjct: 69 DYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAA 128
Query: 154 LPLIKKRQNGGPASIALMSSQAG 176
PL+++ G + I + + QA
Sbjct: 129 YPLLRRP---GASIIQISAPQAF 148
|
Length = 264 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 9e-23
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
P+ V +TGG+SGIG A+A A+ GARV + S L G +V
Sbjct: 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATA---ARLPGAKVTATV 64
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFH 148
ADV D V+ D A G +DVLV N G+ P G ++ + ++ + VN+ G F+
Sbjct: 65 ADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAG 176
+AA+PL+K +GG I +SS AG
Sbjct: 125 FARAAVPLLKASGHGG--VIIALSSVAG 150
|
Length = 264 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 2e-22
Identities = 71/236 (30%), Positives = 106/236 (44%), Gaps = 50/236 (21%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSIL---ARSGKKLEEAKQSIQLATGIEVATYSA 94
R V ITGGS G+G A+A + A +GA V +L G+ +A + A G + +
Sbjct: 7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAF 66
Query: 95 DVRDFDAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DVRDF A + ALD E G +D+LV N G+ S++E +IDVN+ G F++
Sbjct: 67 DVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVT 126
Query: 151 KAAL-PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
+AAL P+I+ R+ G I ++S AG +G+ G
Sbjct: 127 QAALPPMIRARRGG---RIVNIASVAG----------------------VRGNRGQ---- 157
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
+ + ASK GL GL + L E+ I V+ + P TP +
Sbjct: 158 -------------VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN 200
|
Length = 249 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 3e-22
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
+ + V +TG + GIG LA + GA+++++ +L L V T
Sbjct: 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAE--LGGDDRVLTVV 63
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
ADV D A++ A +EA G +DV+V N G+ G + D R +IDVN+ G FH
Sbjct: 64 ADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHT 123
Query: 150 IKAALP-LIKKR 160
++A LP LI++R
Sbjct: 124 VRATLPALIERR 135
|
Length = 296 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 4e-22
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TG S GIG +A A+ GA + I +R+ +K EEA+Q I+ G+E ++ DV D +A
Sbjct: 10 VTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIE-KEGVEATAFTCDVSDEEA 68
Query: 102 VKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
+K A++ G +D+LV N G+ E E R +IDVN+ G F + +A +
Sbjct: 69 IKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVARHM 128
Query: 158 KKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188
K+ +G +I + S+ G KG
Sbjct: 129 IKQGHGKIINICSLLSELGGPPVPAYAASKG 159
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 6e-22
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96
+ +T SSGIGLA+A A+EGARV+I AR+ + LE A ++ A G V AD+
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELR-AGGAGVLAVVADL 59
Query: 97 RDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
D + + +++A G VD+LV N G PG + ++ D+ + +++A
Sbjct: 60 TDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119
Query: 153 ALPLIKKRQNGGPASIALMSSQAG 176
LP +K+R G I +SS
Sbjct: 120 VLPGMKERGWG---RIVNISSLTV 140
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 92.4 bits (230), Expect = 1e-21
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K + +TGGS GIGLA+A A+ GA V+I+ S + EE + + G++ Y D
Sbjct: 7 KGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCD 66
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V ++V+ + G +D+L+ N G+ V + ++ +IDVN+ G F+ +
Sbjct: 67 VSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQ 126
Query: 152 AALPLIKKRQNGGPASIALMSSQ 174
AA + KK+ G A MS
Sbjct: 127 AAAKIFKKQGKGSLIITASMSGT 149
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 95.7 bits (239), Expect = 2e-21
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG + GIG A A + A EGA V + + E A +L + DV D
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA--ELGGPDRALGVACDVTDE 482
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
AV+ A +EA G VD++V N G+ + G +E S ++ R DVN TG F + + A+
Sbjct: 483 AAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVR 542
Query: 156 LIKKRQNGGPASIALMSS 173
++K + GG SI ++S
Sbjct: 543 IMKAQGLGG--SIVFIAS 558
|
Length = 681 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 2e-21
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRD 98
+TG S GIG A+A + AKEGA+V I RS + EE + ++ A G++ DV D
Sbjct: 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELK-AYGVKALGVVCDVSD 59
Query: 99 FDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
+ VK ++E GP+D+LV N G+ L ++ +ID N+TG F++ +A L
Sbjct: 60 REDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119
Query: 155 PLIKKRQNGGPASIALMSSQAG 176
++ K+++G I +SS G
Sbjct: 120 RIMIKQRSG---RIINISSVVG 138
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 92.4 bits (230), Expect = 2e-21
Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 65/284 (22%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA-DV 96
+ F+TG +SGIG A A + A +GA + + R L + + A G V + A D+
Sbjct: 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADAR-ALGGTVPEHRALDI 59
Query: 97 RDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
D+DAV + G +DV++ G+ G ++ + ++ R M+DVN+ G H+I+
Sbjct: 60 SDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIET 119
Query: 153 ALP-LIKKRQNGGPASIALMSSQAGQC---WTIKNTNMKGINENKLCESSGKGHGGYHVT 208
+P ++ + G + +SS AG W H Y
Sbjct: 120 FVPPMVAAGRGG---HLVNVSSAAGLVALPW----------------------HAAYS-- 152
Query: 209 SWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP------- 261
ASKFGLRGL+E L+ ++ I VS++ P +TP
Sbjct: 153 ------------------ASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEI 194
Query: 262 -GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIV 304
G++ E+ R + A+ ++ A+K L G++ ++V
Sbjct: 195 AGVDREDPRVQKWVDRFRGH--AVTPEKAAEKILAGVEKNRYLV 236
|
Length = 272 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 91.4 bits (228), Expect = 3e-21
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL-ATGIEVATYSAD 95
+ +TG SSGIG +A + A EGARV + R+ + E I I VA +D
Sbjct: 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD 64
Query: 96 VRDFDA-VKTALDEAGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D +A V AL+ G VD+LV N G G L E + VN+ + +AA
Sbjct: 65 EADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAA 124
Query: 154 LPLIKKRQNGGPASIALMSSQAG 176
+P ++ + GG +I ++S AG
Sbjct: 125 VPAMRG-EGGG--AIVNVASTAG 144
|
Length = 251 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 3e-21
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 47/229 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+KD+ V +TG S GIG ALA A GAR+ ++ R+ +KLE + A
Sbjct: 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWV--VA 60
Query: 95 DVRDFDAVKTALDEA---GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
D+ + L A G ++VL+ N GV LE Q + + ++ +N+T + +
Sbjct: 61 DLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTR 120
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A LPL++ + + A + + S G G+ GY
Sbjct: 121 ALLPLLRAQPS---AMVVNVGSTFGSI----------------------GYPGYAS---- 151
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
+C ASKF LRG +EAL++E+ + V + P T T
Sbjct: 152 -----YC--------ASKFALRGFSEALRRELADTGVRVLYLAPRATRT 187
|
Length = 263 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 3e-21
Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT 91
R P+ + V ITG SSGIG A A + A+ GA V ++AR+G+ L+E I+ A G
Sbjct: 366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIR-AKGGTAHA 424
Query: 92 YSADVRDFDA----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEV----RLMIDVNI 143
Y+ D+ D A VK L E G VD LV N G + +E S D R M VN
Sbjct: 425 YTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVE-NSTDRFHDYERTM-AVNY 482
Query: 144 TGSFHMIKAALPLIKKRQNG 163
G+ +I LP +++R+ G
Sbjct: 483 FGAVRLILGLLPHMRERRFG 502
|
Length = 657 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 4e-21
Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 60/269 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITG S GIG ALA + A+ GA++ + AR+ +L Q + G E DV D
Sbjct: 4 VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELA-DHGGEALVVPTDVSDA 62
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGEL-EVQSLDEVRLMIDVNITGSFHMIKAAL 154
+A + ++ A G +D+LV N G+ + E+ L ++ VN G+ + AAL
Sbjct: 63 EACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAAL 122
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
P +K + I ++SS AG + G+ GY
Sbjct: 123 PHLKASR----GQIVVVSSLAG---------LTGV----------PTRSGYA-------- 151
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR----- 269
ASK L G ++L+ E+ D + V+++ P T + KR
Sbjct: 152 ------------ASKHALHGFFDSLRIELADDGVAVTVVCPGFVAT----DIRKRALDGD 195
Query: 270 -RPRLTSIIAASSGAMKADEVAKKALDGI 297
+P S + S M A+E A+ L I
Sbjct: 196 GKPLGKSPM-QESKIMSAEECAEAILPAI 223
|
Length = 263 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 7e-21
Identities = 62/232 (26%), Positives = 88/232 (37%), Gaps = 51/232 (21%)
Query: 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATY 92
++ + V ITGG+ GIGLA A A GARV+I +E + L G
Sbjct: 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVG-----G 55
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
DV D + LD GP+DVLV N GV G + R ++DVN+ G
Sbjct: 56 PLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVIL 115
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVT 208
K A P + R G G HV
Sbjct: 116 GSKLAAPRMVPR----------------------------------------GRG--HVV 133
Query: 209 SWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
+ L+G+ + G + ASK + G +A + E+ +HVS++ P T
Sbjct: 134 NVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNT 185
|
Length = 273 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 8e-21
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 49/228 (21%)
Query: 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
V ITG SSGIG A A + AK GA++ + R ++L+E + ++V DV D
Sbjct: 2 TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVSD 61
Query: 99 FDAVKTAL----DEAGPVDVLVVNQGVFVPGELEVQS--LDEVRLMIDVNITGSFHMIKA 152
++++ AL +E +D+LV N G G Q L++ MID N+ G ++ +
Sbjct: 62 RESIEAALENLPEEFRDIDILVNNAG-LALGLDPAQEADLEDWETMIDTNVKGLLNVTRL 120
Query: 153 ALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRE 212
LP++ R G I + S A G Y
Sbjct: 121 ILPIMIARNQG---HIINLGSIA-------------------------GRYPY------- 145
Query: 213 LSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
G ++ A+K +R + L++++I I V+ I P ET
Sbjct: 146 -------AGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNIEPGLVET 186
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 89.6 bits (223), Expect = 1e-20
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
ITG SSGIG A A AK G ++++ARS LE ++ +TG++ A YS D+
Sbjct: 7 PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELR-STGVKAAAYSIDLS 65
Query: 98 DFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
+ +A+ + E G DVL+ N G+ G L L + + +I +N+T F A
Sbjct: 66 NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAV 125
Query: 154 LPLIKKRQNG 163
LP ++ R G
Sbjct: 126 LPGMRARGGG 135
|
Length = 241 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 89.6 bits (223), Expect = 1e-20
Identities = 67/265 (25%), Positives = 93/265 (35%), Gaps = 60/265 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+FITG +SGIG A A A EG RV + L + T + DV D
Sbjct: 4 IFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL---GAGNAWTGALDVTDR 60
Query: 100 DAVKTALDE-----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
A AL + G +DVL N G+ G E L+ +ID+N+ G + AAL
Sbjct: 61 AAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAAL 120
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSG-KGHGGYHVTSWREL 213
P +K A + IN +S G G V S
Sbjct: 121 PYLKA------TPGARV-----------------IN---TSSASAIYGQPGLAVYS---- 150
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE--ENKRRP 271
A+KF +RGL EAL E I V+ + P +T L+
Sbjct: 151 -------------ATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAG 197
Query: 272 RLTSIIAASSGA-MKADEVAKKALD 295
G + ++VA+
Sbjct: 198 ST-----KRLGVRLTPEDVAEAVWA 217
|
Length = 260 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 1e-20
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100
ITG GIG +A A+ GA + +L S + + A + G ADVRD
Sbjct: 10 LITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCG--RGHRCTAVVADVRDPA 67
Query: 101 AV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
+V K A ++ G +D+LV N GV G S ++ ID+NI G +++ KA LP
Sbjct: 68 SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPE 127
Query: 157 IKKRQNGGPASIALMSSQAG 176
+ R++G I +MSS G
Sbjct: 128 MIARKDG---RIVMMSSVTG 144
|
Length = 263 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 2e-20
Identities = 76/272 (27%), Positives = 110/272 (40%), Gaps = 61/272 (22%)
Query: 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
V ITGG SGIG LA + AK GA+V IL + K EE ++ G +V Y DV
Sbjct: 1 IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNV-RKAGGKVHYYKCDVSK 59
Query: 99 FDAVKTALD----EAGPVDVLVVNQGVFVPGE--LEVQSLDEVRLMIDVNITGSFHMIKA 152
+ V A E G V +L+ N GV V G+ LE+ +E+ +VN F KA
Sbjct: 60 REEVYEAAKKIKKEVGDVTILINNAGV-VSGKKLLELPD-EEIEKTFEVNTLAHFWTTKA 117
Query: 153 ALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRE 212
LP + +R +G I ++S AG I+ L +
Sbjct: 118 FLPDMLERNHG---HIVTIASVAGL-----------ISPAGLAD---------------- 147
Query: 213 LSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA---DDIHVSLIFPPDTETPGLEEENKR 269
+C ASK G E+L+ E+ A I +L+ P T +
Sbjct: 148 ----YC--------ASKAAAVGFHESLRLELKAYGKPGIKTTLVCPYFINTGMFQGVKTP 195
Query: 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGS 301
RP L I+ + + VA+K + I +
Sbjct: 196 RPLLAPIL-------EPEYVAEKIVRAILTNQ 220
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.0 bits (219), Expect = 3e-20
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG S GIG A+A + A EGA+V++ RS + E + I+ A G A ADV D
Sbjct: 3 ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIK-ALGGNAAALEADVSDR 61
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+AV+ +++ GPVD+LV N G+ L S ++ +I+VN+TG F++ +A +
Sbjct: 62 EAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAVIR 121
Query: 156 LIKKRQNGGPASIALMSSQAGQ 177
+ KR++G I +SS G
Sbjct: 122 AMIKRRSG---RIINISSVVGL 140
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 4e-20
Identities = 68/221 (30%), Positives = 100/221 (45%), Gaps = 47/221 (21%)
Query: 40 VFITGGSSGIGLALAHQ-AAKEGARVSILA--RSGKKLEEAKQSIQLATGIEVATYSADV 96
V ITG SSGIGL LA + A+ R + A R KK ++ G + T DV
Sbjct: 3 VLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQLDV 62
Query: 97 RDFDAVKTALD--EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
D +V A++ VDVLV N GV + G LE S D + + DVN+ G+ M++A L
Sbjct: 63 CDSKSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRMLQAFL 122
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
P +K+R +G I + SS G ++G+ N
Sbjct: 123 PDMKRRGSG---RILVTSSVGG---------LQGLPFND--------------------- 149
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
++ ASKF L GL E+L +++ ++H+SLI
Sbjct: 150 ---------VYCASKFALEGLCESLAVQLLPFNVHLSLIEC 181
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.6 bits (218), Expect = 6e-20
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 8/143 (5%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + +TG +SGIGL +A AKEGA+V I + + A +++Q G + +
Sbjct: 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQ-KAGGKAIGVAM 60
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D +A+ +D A G VD+LV N G+ +E ++ + MI + + G+F
Sbjct: 61 DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTT 120
Query: 151 KAALPLIKKRQNGGPASIALMSS 173
KAALP I K Q GG I M+S
Sbjct: 121 KAALP-IMKAQGGG--RIINMAS 140
|
Length = 258 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 7e-20
Identities = 72/268 (26%), Positives = 106/268 (39%), Gaps = 60/268 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITGG+SGIGLALA + + G V I R ++L EAK + T DV D
Sbjct: 8 VLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAK-----KELPNIHTIVLDVGDA 62
Query: 100 DAVKTALDE---AGP-VDVLVVNQGVFVPGELEV--QSLDEVRLMIDVNITGSFHMIKAA 153
++V+ + P +D+L+ N G+ P +L LD+ ID N+ G +IKA
Sbjct: 63 ESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPIRLIKAF 122
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
LP +KK+ TI N SSG
Sbjct: 123 LPHLKKQPEA----------------TIVNV------------SSGLAFVPM------AA 148
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+ +C A+K L AL+ ++ + V I PP +T EE +R P
Sbjct: 149 NPVYC--------ATKAALHSYTLALRHQLKDTGVEVVEIVPPAVDTELHEE--RRNPDG 198
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGS 301
+ M DE + + G++ G
Sbjct: 199 GTPR-----KMPLDEFVDEVVAGLERGR 221
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 1e-19
Identities = 76/273 (27%), Positives = 107/273 (39%), Gaps = 62/273 (22%)
Query: 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
VFITG SSGIG ALA + A++GA + ++AR L+ L V+ Y+ADVRD
Sbjct: 4 KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAAR--LPKAARVSVYAADVRD 61
Query: 99 FDAVKTA----LDEAGPVDVLVVNQGVFVPGEL--EVQSLDEVRLMIDVNITGSFHMIKA 152
DA+ A + G DV++ N G+ V G L E + L R ++D N G M+
Sbjct: 62 ADALAAAAADFIAAHGLPDVVIANAGISV-GTLTEEREDLAVFREVMDTNYFG---MVAT 117
Query: 153 ALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRE 212
P I + ++ ++S AG ++G+ G G Y
Sbjct: 118 FQPFIAPMRAARRGTLVGIASVAG---------VRGL----------PGAGAYS------ 152
Query: 213 LSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272
ASK E+L+ E+ + V I P TP P
Sbjct: 153 --------------ASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYPMPF 198
Query: 273 LTSIIAASSGAMKADEVAKKALDGIKSG-SFIV 304
L M AD A +A I G F V
Sbjct: 199 L----------MDADRFAARAARAIARGRRFRV 221
|
Length = 257 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 86.0 bits (214), Expect = 2e-19
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 9/142 (6%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100
+TG S GIG A+A AKEGA+V I + + +E + I+ G + ADV +
Sbjct: 10 VTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIK-EEGGDAIAVKADVSSEE 68
Query: 101 AVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
V+ +++ G +D+LV N G+ G + + +E +IDVN+TG + + ALP
Sbjct: 69 DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPY 128
Query: 157 IKKRQNGGPASIALMSSQAGQC 178
+ KR++G I +SS G
Sbjct: 129 MIKRKSG---VIVNISSIWGLI 147
|
Length = 247 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.5 bits (214), Expect = 2e-19
Identities = 80/274 (29%), Positives = 122/274 (44%), Gaps = 57/274 (20%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
R ITGG+SGIGLA + A+ GARV + L +A ++ A G +V DVR
Sbjct: 7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR-AEGFDVHGVMCDVR 65
Query: 98 DFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
+ V DEA G VDV+ N G+ V G + + D+ R +IDV++ GS H ++A
Sbjct: 66 HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAF 125
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
LP + ++ GG + +S AG L ++G G G
Sbjct: 126 LPRLLEQGTGG--HVVFTASFAG-----------------LVPNAGLGAYG--------- 157
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
+K+G+ GLAE L +EV AD I VS++ P ET L ++R
Sbjct: 158 -------------VAKYGVVGLAETLAREVTADGIGVSVLCPMVVET-NLVANSERIRGA 203
Query: 274 TSIIAASSGAM----------KADEVAKKALDGI 297
++++G+ D++A+ D I
Sbjct: 204 ACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAI 237
|
Length = 275 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 2e-19
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGI---EVATY 92
+ ITG SSGIG A A+ GAR+++ R ++LEE +QS L G+ ++
Sbjct: 2 SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSC-LQAGVSEKKILLV 60
Query: 93 SADVRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
AD+ + + + T L + G +D+LV N G+ G E Q ++E ++++N+ +
Sbjct: 61 VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIY 120
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+ K A+P + K + I +SS AG
Sbjct: 121 LTKLAVPHLIKTK----GEIVNVSSVAGG 145
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 3e-19
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ + V ITG S GIG A A A EG + ++AR LE ++ A G++VA ++
Sbjct: 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64
Query: 95 DVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
D+ +A + EAG +D+LV N G G L+ R ++ + G + + A
Sbjct: 65 DLSSPEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAY 124
Query: 155 PLIKKRQNG 163
P +K R +G
Sbjct: 125 PRMKARGSG 133
|
Length = 259 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 3e-19
Identities = 76/279 (27%), Positives = 115/279 (41%), Gaps = 67/279 (24%)
Query: 41 FITGGSSGIGLALAHQAAKEGAR-------------VSILARSGKKLEEAKQSIQLATGI 87
FITG + G G A A + A EGA + + + L+E + ++ A G
Sbjct: 7 FITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVE-ALGR 65
Query: 88 EVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNI 143
+V ADVRD V+ +++ G +DV+V N GV G S ++ ++D+N+
Sbjct: 66 KVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLDINL 125
Query: 144 TGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHG 203
TG + KA +P + +R NGG SI + SS AG +K + G H
Sbjct: 126 TGVWRTCKAVVPHMIERGNGG--SIIITSSVAG---------LKAL--------PGLAH- 165
Query: 204 GYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263
+ A+K GL GL + L E+ I V+ I P +TP +
Sbjct: 166 ---------------------YAAAKHGLVGLTKTLANELAEYGIRVNSIHPYSVDTPMI 204
Query: 264 EEENKRRPRLTSIIAAS--------SGAMKADEVAKKAL 294
E R L AA SG + ++VA L
Sbjct: 205 APEAMREAFLKYPEAARAFMPALPVSGFVPPEDVADAVL 243
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 4e-19
Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 50/219 (22%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-- 98
FITG S G G A A + G RV AR L + + G + + DV D
Sbjct: 7 FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GDRLLPLALDVTDRA 62
Query: 99 --FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
F AV+TA++ G +D++V N G + G +E + E R ID N G+ + +A LP
Sbjct: 63 AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122
Query: 157 IKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQ 216
++++++G I +SS G S+ G YH
Sbjct: 123 LREQRSG---HIIQISSIGGI-------------------SAFPMSGIYH---------- 150
Query: 217 FCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
ASK+ L G++EAL QEV I V+L+ P
Sbjct: 151 ----------ASKWALEGMSEALAQEVAEFGIKVTLVEP 179
|
Length = 275 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 1e-18
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96
+ +TG +SGIGLA+A A GA V + + E A + A G V ADV
Sbjct: 1 GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDA-GGSVIYLPADV 59
Query: 97 RDFDAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
D + + E G +D+LV N G+ +E ++ +I V +T +FH I+A
Sbjct: 60 TKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119
Query: 153 ALPLIKKRQNG 163
ALP +KK+ G
Sbjct: 120 ALPHMKKQGWG 130
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 1e-18
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 49/271 (18%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITG +SG+G A+A + A+EG R+++ + + EE + ++ A G + DVRD+
Sbjct: 3 VMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGG-DGFYQRCDVRDY 61
Query: 100 DAVKTALD--EA--GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+ E G +DV+V N GV G E SL++ I +N+ G KA LP
Sbjct: 62 SQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLP 121
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
L K++++G +IA S AG G Y+V
Sbjct: 122 LFKRQKSGRIVNIA---SMAGL-------------------MQGPAMSSYNV-------- 151
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275
+K G+ L+E L E+ D+I V ++ P +T L+ P + +
Sbjct: 152 ------------AKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKA 199
Query: 276 IIAA--SSGAMKADEVAKKALDGIKSGSFIV 304
+ + A ++A + G F++
Sbjct: 200 QVGKLLEKSPITAADIADYIYQQVAKGEFLI 230
|
Length = 270 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 1e-18
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVATYS 93
+ + +TG + GIG A+A A+EGA V++ E A +I G V
Sbjct: 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
ADV D +V A+ A GP+DVLV N G+ V + + ++ R V++ G+++
Sbjct: 65 ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNG 124
Query: 150 IKAALPLIKKRQNGGPASIA 169
+A LP + +R G +IA
Sbjct: 125 CRAVLPGMVERGRGSIVNIA 144
|
Length = 260 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 2e-18
Identities = 78/271 (28%), Positives = 106/271 (39%), Gaps = 62/271 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + ITGG+SGIGL A Q EGARV+I R LE A+ + G AD
Sbjct: 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GESALVIRAD 60
Query: 96 VRDFDAVKT---ALDEAGP-VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
D A K AL EA +D + +N GV LE + N+ G + +I+
Sbjct: 61 AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQ 120
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A LPL+ PASI L S IN H G +S
Sbjct: 121 ALLPLLAN-----PASIVLNGS---------------IN----------AHIGMPNSS-- 148
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP-----GLEEE 266
++ ASK L LA+ L E++ I V+ + P +TP GL E
Sbjct: 149 ------------VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEA 196
Query: 267 NKRRPRLTSIIAAS--SGAM-KADEVAKKAL 294
+ + I A G +E+AK L
Sbjct: 197 T--LDAVAAQIQALVPLGRFGTPEEIAKAVL 225
|
Length = 249 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 2e-18
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 8/140 (5%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TG + GIG A+A A+ GARV+ + R+ ++L E ++ G ATY DV D
Sbjct: 1 VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLR-RYGYPFATYKLDVADS 59
Query: 100 DAVKTA----LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
AV E GP+DVLV G+ G ++ S ++ + VN G F++ +A P
Sbjct: 60 AAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119
Query: 156 LIKKRQNGGPASIALMSSQA 175
+K+R++G +I + S A
Sbjct: 120 RMKRRRSG---AIVTVGSNA 136
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 2e-18
Identities = 66/224 (29%), Positives = 95/224 (42%), Gaps = 50/224 (22%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100
FITG SSG G + + G RV+ R L++ K + + V DV D
Sbjct: 6 FITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA--RYGDRLWVLQL--DVTDSA 61
Query: 101 AVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
AV+ +D A G +DV+V N G + G E S ++R ID N+ GS +I+AALP
Sbjct: 62 AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPH 121
Query: 157 IKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQ 216
+ +RQ GG I +SS+ GQ + G YH
Sbjct: 122 L-RRQGGG--RIVQVSSEGGQ-------------------IAYPGFSLYH---------- 149
Query: 217 FCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
A+K+G+ G EA+ QEV I +++ P T
Sbjct: 150 ----------ATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPART 183
|
Length = 276 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 2e-18
Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + +TGG+ G+GLA A EGA+V + L+E Q+ G +
Sbjct: 3 LKGKVAIVTGGARGLGLAHARLLVAEGAKVVL----SDILDEEGQAAAAELGDAARFFHL 58
Query: 95 DVRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D D V TA + G +DVLV N G+ G +E +L+E R ++D+N+TG F
Sbjct: 59 DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGT 118
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
+A +P +K+ G SI MSS G
Sbjct: 119 RAVIPPMKE---AGGGSIINMSSIEG 141
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 2e-18
Identities = 69/256 (26%), Positives = 97/256 (37%), Gaps = 65/256 (25%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ + ITGG SGIG AL + EGARV++L RS +KL +Q G V
Sbjct: 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQ----RFGDHVLVVEG 59
Query: 95 DVRDFD----AVKTALDEAGPVDVLVVNQGVF--------VPGELEVQSLDEVRLMIDVN 142
DV + AV +D G +D V N G++ +P E + DE + +VN
Sbjct: 60 DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDE---IFNVN 116
Query: 143 ITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGH 202
+ G KAALP AL +S +T+ N S
Sbjct: 117 VKGYLLGAKAALP-------------ALKASGGSMIFTLSN--------------SSFYP 149
Query: 203 GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP- 261
GG G L+ ASK + GL L E +A I V+ + P T T
Sbjct: 150 GG----------------GGPLYTASKHAVVGLVRQLAYE-LAPKIRVNGVAPGGTVTDL 192
Query: 262 -GLEEENKRRPRLTSI 276
G + ++
Sbjct: 193 RGPASLGQGETSISDS 208
|
Length = 263 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 3e-18
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG---KKLE----EAKQSIQLATG 86
+ + +FITG S GIGLA+A +AA++GA + I A++ KL A + I+ A G
Sbjct: 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG 62
Query: 87 IEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVN 142
+ DVRD D V A+ +A G +D+ V N E + LM +N
Sbjct: 63 QALPL-VGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQIN 121
Query: 143 ITGSFHMIKAALPLIKKRQNG 163
+ G+F + +A LP +KK +N
Sbjct: 122 VRGTFLVSQACLPHLKKSENP 142
|
Length = 273 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 4e-18
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV----R 97
+TG + GIG A A + AK G V +++R+ +KL+ + I+ G+E T +AD
Sbjct: 6 VTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAGDD 65
Query: 98 DFDAVKTALDEAGPVDVLVVNQGVF--VPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
++ ++ L E + +LV N G+ +P DE++ +I+VN+ + M + LP
Sbjct: 66 IYERIEKEL-EGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRLILP 124
Query: 156 LIKKRQNGGPASIALMSSQAGQ 177
+ KR+ G I +SS AG
Sbjct: 125 GMVKRKKGA---IVNISSFAGL 143
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 5e-18
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ + +TG +SGIG A+A + EGARV I + L G S
Sbjct: 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKP----ARARLAALEIGPAAIAVSL 59
Query: 95 DVRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D V A++ G +D+L N +F + S D + VN+ G F ++
Sbjct: 60 DVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLM 119
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
+A + ++ GG I M+SQAG
Sbjct: 120 QAVARHMVEQGRGG--KIINMASQAG 143
|
Length = 257 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 7e-18
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100
+TG S GIG A+A + A++GA V + A S EE I+ A G + ADV D
Sbjct: 8 VTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIE-AAGGKAIAVQADVSDPS 66
Query: 101 AVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
V D A G VD+LV N GV + + S +E M VN G+F +++ A
Sbjct: 67 QVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVLQEAA-- 124
Query: 157 IKKRQNGGPASIALMSSQAG 176
KR G I + SS
Sbjct: 125 --KRLRDGGRIINISSSLTA 142
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 7e-18
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYS 93
K + ITGG+ GIG A+A +EGA+V++L + + +E ++ G+ T
Sbjct: 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-----GVF--TIK 57
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV + D VK + + G VDVLV N G+ E ++ MI +N+ G+ +
Sbjct: 58 CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYT 117
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189
LPL+K +NG +I ++S AG + T I
Sbjct: 118 TYEFLPLLKLSKNG---AIVNIASNAGIGTAAEGTTFYAI 154
|
Length = 255 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 8e-18
Identities = 64/226 (28%), Positives = 94/226 (41%), Gaps = 53/226 (23%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG SSGIG A A + A +G V AR K+E+ + G+ S DV D
Sbjct: 6 ALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-----SLGVHP--LSLDVTDE 58
Query: 100 D----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
AV T + E G +DVLV N G G +E +DE R +VN+ G+ + + LP
Sbjct: 59 ASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLP 118
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
++ +++G I +SS G+ +T YH
Sbjct: 119 HMRAQRSG---RIINISSMGGKIYTPLG-------------------AWYH--------- 147
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
A+KF L G ++AL+ EV I V +I P +T
Sbjct: 148 -----------ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTE 182
|
Length = 273 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 2e-17
Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 50/239 (20%)
Query: 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVA 90
+ P+ V ITG SSGIG A A A+ GAR+ + AR + L+ + + A G EV
Sbjct: 1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECR-ALGAEVL 59
Query: 91 TYSADVRDFDAVK----TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGS 146
DV D D VK A G +DV V N GV G E ++ +I N+ G
Sbjct: 60 VVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIG- 118
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYH 206
+M A++ + Q GI N + S G
Sbjct: 119 -YM------------RDAHAALPIFKKQG-----------HGIFINMI--SLG------- 145
Query: 207 VTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD--DIHVSLIFPPDTETPGL 263
+ + + + ASKFGLRG +EAL+ E+ AD DIHV ++P +TPG
Sbjct: 146 --GF--AAQPY----AAAYSASKFGLRGFSEALRGEL-ADHPDIHVCDVYPAFMDTPGF 195
|
Length = 330 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 3e-17
Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 11/121 (9%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITGGSSG+G A+A + A+EGA V I R+ +KLEEAK I+ G +V T DVR+
Sbjct: 4 VIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPG-QVLTVQMDVRNP 62
Query: 100 DAVKTALDEA----GPVDVLVVN-QGVFV-PGE-LEVQSLDEVRLMIDVNITGSFHMIKA 152
+ V+ +++ G +D L+ N G F+ P E L V + V ID+ + G+F+ +A
Sbjct: 63 EDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSV---IDIVLNGTFYCSQA 119
Query: 153 A 153
Sbjct: 120 V 120
|
Length = 252 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 3e-17
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA-D 95
+ V ITG +SGIG A + AK GA V I R+ +K EEA I+ TG D
Sbjct: 1 GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60
Query: 96 VRDFDAVKTA----LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ +V+ L +D+L+ N G+ P + D L VN G F +
Sbjct: 61 LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRL--TKDGFELQFAVNYLGHFLLTN 118
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193
LP++K P+ I +SS + N + NK
Sbjct: 119 LLLPVLKAS---APSRIVNVSS-IAHRAGPIDFNDLDLENNK 156
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 3e-17
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K +TGG+SG+GLA + +GA+V IL E G D
Sbjct: 1 KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGET-----VAKLGDNCRFVPVD 55
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGEL------EVQSLDEVRLMIDVNITG 145
V VK AL A G +D++V G+ V + + SL+ + +I+VN+ G
Sbjct: 56 VTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIG 115
Query: 146 SFHMIKAALPLIKKRQ--NGGP-------ASIALMSSQAGQ 177
+F++I+ A + K + GG AS+A Q GQ
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQ 156
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 3e-17
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TGGS G+GL +A + GARV + AR ++LEEA ++ A GI+ +ADV D
Sbjct: 17 VTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLE-ALGIDALWIAADVADEAD 75
Query: 102 VK----TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
++ L+ G VD+LV N G E ++ ++++N+ G F + +A
Sbjct: 76 IERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRS 135
Query: 158 KKRQNGGP----ASIA 169
+ G AS+A
Sbjct: 136 MIPRGYGRIINVASVA 151
|
Length = 259 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 5e-17
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSG--------KKL----EEAKQSIQLATGI 87
F+TG S GIG A+A + AK GA V + A++ K L EE + I+ A G
Sbjct: 6 AFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGGQ 65
Query: 88 EVATYSADVRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNI 143
+ DVRD D V+ +D+ G +D+LV N G +E LM VN+
Sbjct: 66 ALPI-VVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQRVNL 124
Query: 144 TGSFHMIKAALPLIKKRQNG 163
G++ + +AALP + K G
Sbjct: 125 RGTYLLSQAALPHMVKAGQG 144
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 5e-17
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K + V ++G G+G LA +AA+ GA V + AR+ ++L+E I G D
Sbjct: 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEID-DLGRRALAVPTD 62
Query: 96 VRDFDA----VKTALDEAGPVDVLVVN---QGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
+ D D V AL+ G VD LV N P L R +I++N+ G+
Sbjct: 63 ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKP--LADADFAHWRAVIELNVLGTLR 120
Query: 149 MIKAALPLIKKRQNG---GPASIALMSSQAGQ 177
+ +A P + + G S+ L SQ
Sbjct: 121 LTQAFTPALAE-SGGSIVMINSMVLRHSQPKY 151
|
Length = 258 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 6e-17
Identities = 61/236 (25%), Positives = 91/236 (38%), Gaps = 49/236 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ + V ITGG G+G A A A GARV+++ R G A + +
Sbjct: 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGR-GAAPLSQTLPGVPADALRIG--GI 61
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+ D A + A+DE G +D LV G FV G + D M VN+ + +
Sbjct: 62 DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNAS 121
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
KAALP + +GG I + + A +G G G Y
Sbjct: 122 KAALPALT--ASGG-GRIVNIGAGAAL-------------------KAGPGMGAYA---- 155
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266
A+K G+ L EAL E++ I V+ + P +TP +
Sbjct: 156 ----------------AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD 195
|
Length = 239 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 6e-17
Identities = 69/270 (25%), Positives = 104/270 (38%), Gaps = 54/270 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ R +TG SGIG A A A+EGARV + R + E +I A G
Sbjct: 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAI--AAGGRAFARQG 60
Query: 95 DVRDFDAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV +AV+ +D G +DVLV N G G + + ++ VN+ G F
Sbjct: 61 DVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
K A+P+++++ G SI +SQ L + G+G Y
Sbjct: 121 KYAIPIMQRQGGG---SIVNTASQ-------------------LALAGGRGRAAY----- 153
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
+ASK + L A+ + D I V+ + P +TP R
Sbjct: 154 ---------------VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARH 198
Query: 271 PRLTSIIAASSG--AMK----ADEVAKKAL 294
++ A M A+EVA+ AL
Sbjct: 199 ADPEALREALRARHPMNRFGTAEEVAQAAL 228
|
Length = 252 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 7e-17
Identities = 63/232 (27%), Positives = 92/232 (39%), Gaps = 47/232 (20%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
IT + GIG A+A A+EGA V + +KL+E L G + T DV D
Sbjct: 5 ALITAAAQGIGRAIALAFAREGANVIATDINEEKLKE------LERGPGITTRVLDVTDK 58
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKK 159
+ V E G +DVL G G + D+ +++N+ + MIKA LP +
Sbjct: 59 EQVAALAKEEGRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVLPKMLA 118
Query: 160 RQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCL 219
R++G SI MSS A SS KG V S
Sbjct: 119 RKDG---SIINMSSVA---------------------SSIKGVPNRFVYS---------- 144
Query: 220 LGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
+K + GL +++ + I + I P +TP LEE + +P
Sbjct: 145 -------TTKAAVIGLTKSVAADFAQQGIRCNAICPGTVDTPSLEERIQAQP 189
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 7e-17
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 50/221 (22%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSILARS---GKKLEEAKQSIQLATGIEVATYSADVR 97
+TG SSG GL + AK+G V R+ + L + L I+V DV
Sbjct: 7 IVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQ--QLDVT 64
Query: 98 DFDAVKT---ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
D +++ L E G +D+LV N G G +E ++E R + N+ G+ + +A L
Sbjct: 65 DQNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVL 124
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
P ++K+++G I +SS +S
Sbjct: 125 PYMRKQKSG---KIINISS---------------------------------------IS 142
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
G+ G +++SK+ L G +E+L+ E+ I V+LI P
Sbjct: 143 GRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEP 183
|
Length = 280 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 7e-17
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSI--LARSGKKLEEAKQSIQLATGIEVATY 92
+K + ITGG SGIG A+A A+EGA V+I L EE K+ I+ G +
Sbjct: 24 LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIE-EEGRKCLLI 82
Query: 93 SADVRD--F--DAVKTALDEAGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSF 147
D+ D F D VK + E G +D+LV N P E +E + +++ NI F
Sbjct: 83 PGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMF 142
Query: 148 HMIKAALPLIKK 159
++ KAALP +KK
Sbjct: 143 YLTKAALPHLKK 154
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 7e-17
Identities = 64/267 (23%), Positives = 95/267 (35%), Gaps = 58/267 (21%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIE-VATYSADVRD 98
+FITG +SGIG A A+ G V + E+ ++ G E V + DV D
Sbjct: 3 IFITGAASGIGRETALLFARNGWFVGLYDID----EDGLAALAAELGAENVVAGALDVTD 58
Query: 99 FDAVKTALDE-----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
A AL + G +D L N GV G E L M+D+N+ G + AA
Sbjct: 59 RAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAA 118
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
LP +K A + +S + +
Sbjct: 119 LPYLKATPG---ARVINTASSSA------------------------------------I 139
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
GQ ++ A+KF +RGL EAL E I V+ ++P +TP L +
Sbjct: 140 YGQ---PDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVDTPILT-----KGET 191
Query: 274 TSIIAASSG-AMKADEVAKKALDGIKS 299
+ G + +VAK
Sbjct: 192 GAAPKKGLGRVLPVSDVAKVVWAAAHG 218
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 2e-16
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 50/220 (22%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
ITG S GIG A+A + A + + R ++L+E + AT V D+ D +A
Sbjct: 8 ITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAAELPGATPFPV-----DLTDPEA 61
Query: 102 VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQ 161
+ A+++ G +DVLV N GV G + ++DE R ++VN+ + + LP
Sbjct: 62 IAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLP------ 115
Query: 162 NGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLG 221
AL ++ G I +SG G W +
Sbjct: 116 -------ALRAAH-GHVVFI---------------NSGAGLRAN--PGWGSYA------- 143
Query: 222 TLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
ASKF LR LA+AL++E ++ V+ + P T+T
Sbjct: 144 -----ASKFALRALADALREEE-PGNVRVTSVHPGRTDTD 177
|
Length = 227 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 2e-16
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TG SSGIG A+A + A GA V + RS + E A G + ADV +
Sbjct: 8 VTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSKEED 67
Query: 102 VK----TALDEAGPVDVLVVN---QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
V +A+ E G +D+LV N QG E+ +L++ +IDVN+TG F + A+
Sbjct: 68 VVALFQSAIKEFGTLDILVNNAGLQGDASSHEM---TLEDWNKVIDVNLTGQFLCAREAI 124
Query: 155 PLIKKRQNGGPASIALMSS 173
+K + G I MSS
Sbjct: 125 KRFRKSKIKG--KIINMSS 141
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 3e-16
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI--QLAT 85
PK + R F+TGG+ GIG A + A EGA V + + + E I Q
Sbjct: 407 PKEK--TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA 464
Query: 86 GIEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDV 141
G VA DV D AVK A + G VD++V N G+ E +L E +L +D+
Sbjct: 465 GRAVAL-KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDI 523
Query: 142 NITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176
TG F + + A ++++ GG +I ++S+
Sbjct: 524 LATGYFLVAREAFRQMREQGLGG--NIVFIASKNA 556
|
Length = 676 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 4e-16
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 9 FLVLLLPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA 68
L + P LL I RP + + + + +TG SSGIG A A Q A+ GA V +A
Sbjct: 14 TLAGMRPPISPQLL--INRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVA 71
Query: 69 RSGKKLEEAKQSIQLATGIEVATYSADVRDFDA----VKTALDEAGPVDVLVVNQGVFVP 124
R L+ I G + D+ D DA V G VD+L+ N G +
Sbjct: 72 RREDLLDAVADRI-TRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIR 130
Query: 125 GELEVQSLD---EVRLMIDVNITGSFHMIKAALPLIKKRQNG 163
L +SLD +V + +N +I+ P + +R +G
Sbjct: 131 RPLA-ESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDG 171
|
Length = 293 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 5e-16
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+ +TG + G+G A A A+ GA V+ + E +++ A G +AD+
Sbjct: 8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALE-AAGGRAHAIAADLA 66
Query: 98 DFDAVKTALDEA----GPVDVLVVNQGVFVPG---ELEVQSLDEVRLMIDVNITGSFHMI 150
D +V+ D A G +D LV N G+ EL++ + D V ++VN+ G+F M+
Sbjct: 67 DPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAV---MNVNVRGTFLML 123
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
+AALP + R +G + L S A
Sbjct: 124 RAALPHL--RDSGRGRIVNLASDTALW 148
|
Length = 250 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 5e-16
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATY-SADV 96
+ ITGG+SGIGLA A K+GA+V+IL R+ A +Q AT+ DV
Sbjct: 1 KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKVKATFVQCDV 58
Query: 97 RDFD----AVKTALDEAGPVDVLVVNQGVFVP-GELEVQSLDE-VRLMIDVNITGSFHMI 150
++ A K A+++ G VD+L+ N G+ L L IDVN+TG +
Sbjct: 59 TSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTT 118
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
AL + K + G I + S AG
Sbjct: 119 YLALHYMDKNKGGKGGVIVNIGSVAG 144
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 6e-16
Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96
+ +TG GIG A AK GARV ++R+ L+ ++ GIE D+
Sbjct: 7 GKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLD---SLVRECPGIE--PVCVDL 61
Query: 97 RDFDAVKTALDEAGPVDVLVVNQGVFVP---GELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D+DA + AL GPVD+LV N V + E+ ++ D DVN+ H+ +
Sbjct: 62 SDWDATEEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDR---SFDVNVRAVIHVSQIV 118
Query: 154 LPLIKKRQNGGPASIALMSSQAGQC 178
+ R G P SI +SSQA Q
Sbjct: 119 ARGMIAR--GVPGSIVNVSSQASQR 141
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 7e-16
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 22/140 (15%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+KD+ + ITGG+ G+G A+A A++GA+++++ + +KLEEA G EV Y+A
Sbjct: 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-GTEVRGYAA 61
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGEL------EVQ---SLDEVRLMIDV 141
+V D + V+ + G ++ L+ N G+ G L +V SL++ + +IDV
Sbjct: 62 NVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDV 121
Query: 142 NITGSF--------HMIKAA 153
N+TG F MI++
Sbjct: 122 NLTGVFLCGREAAAKMIESG 141
|
Length = 253 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 7e-16
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + ITG S GIG A+A AK GA + + + +++ + + GIE Y
Sbjct: 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR-ELGIEAHGYVC 66
Query: 95 DVRDFDAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D D V+ + E G +D+LV N G+ + S ++ R +ID+++ F +
Sbjct: 67 DVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVS 126
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
KA +P + K+ +G +I M S+ G
Sbjct: 127 KAVIPSMIKKGHGKIINICSMMSELG 152
|
Length = 265 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 9e-16
Identities = 70/277 (25%), Positives = 107/277 (38%), Gaps = 78/277 (28%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG SSGIG A A + A+ G RV +R+ + I +E+ DV D
Sbjct: 7 ALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA----APIPGVELLEL-----DVTDD 57
Query: 100 D----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
AV + AG +DVLV N GV + G E S+ + + + D N+ G M +A LP
Sbjct: 58 ASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLP 117
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
++ + +G I +SS
Sbjct: 118 HMRAQGSG---RIINISS------------------------------------------ 132
Query: 216 QFCLLGTL------LWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP-------- 261
+LG L L+ ASK + G +E+L EV I VSL+ P T+T
Sbjct: 133 ---VLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEP 189
Query: 262 --GLEEENKRRPRLTSIIAAS-SGAMKADEVAKKALD 295
L E ++ R ++ +A + A + VA +
Sbjct: 190 DSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVK 226
|
Length = 270 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 9e-16
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ R +TG S GIG ALA A+ GA V + R KL A +S++ G+ +
Sbjct: 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK-GQGLSAHALAF 66
Query: 95 DVRDFDAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D DAV+ A+D E GP+D+LV N G+ LE D ++ NI+ F++
Sbjct: 67 DVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVG 126
Query: 151 KAALPLIKKRQNGGPASIA 169
+A + R G +IA
Sbjct: 127 QAVARHMIARGAGKIINIA 145
|
Length = 255 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 9e-16
Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVA-TYSADVRD 98
FITG + G+G A+A + A++GA+V + L+ I A G VA DV D
Sbjct: 3 FITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD 62
Query: 99 FDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
+ L +A G + VLV N GV G +E LDE R ++ +N+ F K AL
Sbjct: 63 EAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHAL 122
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193
P ++ Q PASI +SS A + N +K
Sbjct: 123 PYLRASQ---PASIVNISSVAA---FKAEPDYTAYNASK 155
|
Length = 251 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 1e-15
Identities = 66/264 (25%), Positives = 103/264 (39%), Gaps = 70/264 (26%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K ITGG SG+G AL + EGA+V++L RS +K+ E + G V
Sbjct: 2 LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRA----DFGDAVVGVEG 57
Query: 95 DVRDFD----AVKTALDEAGPVDVLVVNQGVF--------VPGELEVQSLDEVRLMIDVN 142
DVR AV ++ G +D + N G++ +P E ++ DE + +N
Sbjct: 58 DVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDE---LFHIN 114
Query: 143 ITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGH 202
+ G KAALP AL +++ +T+ N +G
Sbjct: 115 VKGYILGAKAALP-------------ALYATEGSVIFTVSN--------------AGFYP 147
Query: 203 GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP- 261
GG G L+ ASK + GL + L E +A I V+ + P T
Sbjct: 148 GG----------------GGPLYTASKHAVVGLVKQLAYE-LAPHIRVNGVAPGGMVTDL 190
Query: 262 ------GLEEENKRRPRLTSIIAA 279
G E + P L ++ +
Sbjct: 191 RGPASLGQGETSISTPPLDDMLKS 214
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 1e-15
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 37 DRHV-FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
D V +TG +SGIGLA+A + KEG RV + AR + L + ++ G+E + D
Sbjct: 2 DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELR-EAGVEADGRTCD 60
Query: 96 VR---DFDA-VKTALDEAGPVDVLVVNQGVFVPGELEVQSL-DEVRL-MIDVNITGSFHM 149
VR + +A V A+ GP+DVLV N G G L DE+ L +++ N+TG F +
Sbjct: 61 VRSVPEIEALVAAAVARYGPIDVLVNNAG--RSGGGATAELADELWLDVVETNLTGVFRV 118
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQ 177
K L + G I + S+ Q
Sbjct: 119 TKEVLKAGGMLERGTGRIINIASTGGKQ 146
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 2e-15
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 28 PKPVRIP----IKDRHVFITGGS-SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ 82
P +P + + V +T + +GIG A A +A +EGARV I ++L E +
Sbjct: 4 TAPKYVPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELA 63
Query: 83 LATGIE-VATYSADVRDFDAVK----TALDEAGPVDVLVVNQGVFVPGELEVQSL--DEV 135
G+ V DV V A++ G +DVLV N G + G+ V + DE
Sbjct: 64 AELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAG--LGGQTPVVDMTDDEW 121
Query: 136 RLMIDVNITGSFHMIKAALPLIKKRQNGG----PASIALMSSQAGQ 177
++DV +TG+F +AAL ++ R +GG AS+ +Q GQ
Sbjct: 122 SRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQ 167
|
Length = 262 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 2e-15
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDF 99
+TG +SGIGL +A A GA + +L G E LA G++V + AD+
Sbjct: 7 VTGSTSGIGLGIARALAAAGANI-VLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLSKP 65
Query: 100 ----DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
D V A + G VD+LV N G+ +E ++ +I +N++ FH + ALP
Sbjct: 66 AAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRLALP 125
Query: 156 LIKKRQNGGPASIA 169
+KK+ G +IA
Sbjct: 126 HMKKQGWGRIINIA 139
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 2e-15
Identities = 69/277 (24%), Positives = 102/277 (36%), Gaps = 71/277 (25%)
Query: 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVAT 91
+ IK + V +TG + GIG A Q GA V AR + + + G V
Sbjct: 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVP 53
Query: 92 YSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMI 150
DV D +V A + A V +LV N G+F G L D +R ++ N G M
Sbjct: 54 LQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMA 113
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+A P++ NGG A + ++S V SW
Sbjct: 114 RAFAPVLAA--NGGGAIVNVLS----------------------------------VLSW 137
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP--DTE-TPGLEEEN 267
F LGT + ASK L +AL+ E+ V + P DT+ GL+
Sbjct: 138 V----NFPNLGT--YSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAP- 190
Query: 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIV 304
+VA++ LD +++G V
Sbjct: 191 ---------------KASPADVARQILDALEAGDEEV 212
|
Length = 238 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 3e-15
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 15/145 (10%)
Query: 40 VFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATY-SADVR 97
V ITG S GIGL L Q G V R E L DV
Sbjct: 1 VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELA---ALGASHSRLHILELDVT 57
Query: 98 DF-----DAVKTALDEAGPVDVLVVNQGVFVPGELEVQ-SLDEVRLMIDVNITGSFHMIK 151
D +AV L +AG +DVL+ N G+ + +++ + VN+ G + +
Sbjct: 58 DEIAESAEAVAERLGDAG-LDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQ 116
Query: 152 AALPLIKKRQNGGPASIALMSSQAG 176
A LPL+ K G A I +SS+ G
Sbjct: 117 AFLPLLLK---GARAKIINISSRVG 138
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 4e-15
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
+ V + GGS GIG A+ + +GA V +G K +A + + TG
Sbjct: 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANV-RFTYAGSK--DAAERLAQETGATA--VQ 57
Query: 94 ADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D D DAV + ++G +D+LVVN G+ V G+ D++ + +NI +H A+
Sbjct: 58 TDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYH---AS 114
Query: 154 LPLIKKRQNGG 164
+ ++ GG
Sbjct: 115 VEAARQMPEGG 125
|
Length = 237 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 4e-15
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 49/228 (21%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVR 97
ITG + GIG A+A + A +G + + + ++ AK +IQ + G ADV
Sbjct: 5 AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEA--AKSTIQEISEAGYNAVAVGADVT 62
Query: 98 DFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D D V+ +D+A G DV+V N G+ L + ++++ + VN+ G I+AA
Sbjct: 63 DKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
KK +GG K IN SS G G+
Sbjct: 123 ARQFKKLGHGG----------------------KIINA-----SSIAGVQGFPNLG---- 151
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
+ ASKF +RGL + QE+ I V+ P +T
Sbjct: 152 ----------AYSASKFAVRGLTQTAAQELAPKGITVNAYAPGIVKTE 189
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 4e-15
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 32/161 (19%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K V +TGG+SG+G A+ + EGARV++L +S L+E ++ A G V
Sbjct: 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE----LEAAHGDAVVGVEG 58
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVF--------VPGELEVQSLDEVRLMIDVN 142
DVR D K A+ G +D L+ N G++ +P + ++ DE + +N
Sbjct: 59 DVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDE---VFHIN 115
Query: 143 ITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183
+ G +KAALP AL++S+ +TI N
Sbjct: 116 VKGYLLAVKAALP-------------ALVASRGSVIFTISN 143
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 5e-15
Identities = 60/231 (25%), Positives = 90/231 (38%), Gaps = 52/231 (22%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
R +TGG GIG A+ + AK+G RV+ ++ EA Q A G + DV
Sbjct: 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVS 60
Query: 98 DFDAVKTALDEA----GPVDVLVVNQGVF---VPGELEVQSLDEVRLMIDVNITGSFHMI 150
F++ K A+ + GP+DVLV N G+ ++ + V ID N+ F++
Sbjct: 61 SFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAV---IDTNLNSVFNVT 117
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+ P+I + G I +SS GQ
Sbjct: 118 Q---PVIDGMRERGWGRIINISSVNGQ--------------------------------- 141
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
GQF G + A+K G+ G +AL QE + V+ I P T
Sbjct: 142 ---KGQF---GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATD 186
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 6e-15
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK---KLE----EAKQSIQLATGI 87
+ + +FITG S GIG A+A +AA++GA V I A++ + KL A + I+ A G
Sbjct: 1 LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60
Query: 88 EVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNI 143
+ D+RD D V+ A+++A G +D+LV N + LM+ VN
Sbjct: 61 ALPC-IVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNT 119
Query: 144 TGSFHMIKAALPLIKKRQN 162
G++ KA LP +KK +N
Sbjct: 120 RGTYLCSKACLPYLKKSKN 138
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 7e-15
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+ GGSSGIGLALA A EGARV+I +RS +L A +++ V T + D+ D A
Sbjct: 2 VVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAP--VRTAALDITDEAA 59
Query: 102 VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
V EAGP D +V+ G + L + +D G++ + +AA
Sbjct: 60 VDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAA 111
|
Length = 230 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 1e-14
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSA 94
KD+ V ITGG SG+GLA A + AKEGA++S++ + + LE AK ++ ++A EV A
Sbjct: 2 KDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKA 61
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQ-SLDEVRLMIDVNITGSFHM 149
DV D V+ +D G +D N G+ L DE ++ +N+ G F+
Sbjct: 62 DVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYG 121
Query: 150 IKAALPLIKKRQNG 163
++ L +++++ +G
Sbjct: 122 LEKVLKVMREQGSG 135
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 1e-14
Identities = 76/280 (27%), Positives = 109/280 (38%), Gaps = 77/280 (27%)
Query: 35 IKDRHVFITGGSSGIGLA-----LAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEV 89
IKD+ V +TG + GIG A LAH A K A V S L +V
Sbjct: 1 IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPG-SAAHLVAKYGD-------KV 52
Query: 90 ATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFH 148
DV D +++K A +A VDV++ N GV P LE +L+ ++ +DVN+ G
Sbjct: 53 VPLRLDVTDPESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLR 112
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVT 208
+ +A P++K NGG A + L S V
Sbjct: 113 LAQAFAPVLKA--NGGGAIVNLNS----------------------------------VA 136
Query: 209 SWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP--DTETPGLEEE 266
S + F +GT + ASK L + L+ E+ A V + P DT
Sbjct: 137 SLK----NFPAMGT--YSASKSAAYSLTQGLRAELAAQGTLVLSVHPGPIDTR------- 183
Query: 267 NKRRPRLTSIIAASSGAMKAD--EVAKKALDGIKSGSFIV 304
+AA +G K VA+ L +K+G F V
Sbjct: 184 ----------MAAGAGGPKESPETVAEAVLKALKAGEFHV 213
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 2e-14
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT 91
R ++ + +TGG+ GIG A+ + A GA V AR+ K+L+E + G +V
Sbjct: 1 RWNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREK-GFKVEG 59
Query: 92 YSADVRDFDAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGS 146
DV + +D G +++LV N G + E + + ++ L++ N +
Sbjct: 60 SVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAA 119
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAG 176
+H+ + A PL+K NG +I +SS AG
Sbjct: 120 YHLSRLAHPLLKASGNG---NIVFISSVAG 146
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 2e-14
Identities = 70/293 (23%), Positives = 111/293 (37%), Gaps = 56/293 (19%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TG +SGIG +A + A+ GA V+I + I G + + DV + DA
Sbjct: 12 VTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEIN-KAGGKAIGVAMDVTNEDA 70
Query: 102 VKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
V +D+ G VD+LV N G+ + +E S + + M +++ G+F KAAL +
Sbjct: 71 VNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHM 130
Query: 158 KKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQF 217
K GG + M S S K
Sbjct: 131 YKDDRGG--VVIYMGSVHS-----------------HEASPLKS---------------- 155
Query: 218 CLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSII 277
++ +K GL GLA L +E ++ ++ P TP ++ K+ P
Sbjct: 156 ------AYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD---KQIPE----Q 202
Query: 278 AASSGAMKADEVAKKALDGIKSGSFIVP---CNSEGFLLSIATAGLSPQRSVL 327
A G + + V K L G F + FL S +A L+ Q V+
Sbjct: 203 AKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVV 255
|
Length = 262 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 2e-14
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-LEEAKQSIQLATGIEVA--- 90
++ + V ITGGS+G+G A+A + KE A+V I RS ++ + + I+ A G +A
Sbjct: 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG 64
Query: 91 --TYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
T +DV + ++TA+ E G +DV++ N G+ SL++ +I+ N+TG+F
Sbjct: 65 DVTVESDVVNL--IQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFL 122
Query: 149 MIKAALPLIKKRQNGGPASIALMSS 173
+ A+ + + +I MSS
Sbjct: 123 GSREAIKYFVE--HDIKGNIINMSS 145
|
Length = 261 |
| >gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10 | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 3e-14
Identities = 52/215 (24%), Positives = 77/215 (35%), Gaps = 46/215 (21%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ G G+G A+A + A EG V++ AR KLE I G D RD
Sbjct: 2 AAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARDE 61
Query: 100 DAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
D V D E GP++VLV N G V + + + ++ G F + A
Sbjct: 62 DEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREAAK 121
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+ R G TI T +S +G G+ +
Sbjct: 122 RMLARGRG----------------TIIFTG---------ATASLRGRAGFAAFA------ 150
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHV 250
+KF LR LA+++ +E+ IHV
Sbjct: 151 -----------GAKFALRALAQSMARELGPKGIHV 174
|
This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 3e-14
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Query: 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVAT 91
I ++ R +TGGSSGIGLA + GA V+I R ++L A+ ++ G +
Sbjct: 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLA 63
Query: 92 YSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF 147
DV D V G VD+LV N G + D R +++
Sbjct: 64 ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVI 123
Query: 148 HMIKAALPLIKKRQNG 163
+ +A LPL++
Sbjct: 124 NPTRAFLPLLRASAAA 139
|
Length = 265 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 4e-14
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
+TG + GIG + Q AK G IL AR ++ + A + ++ A G+ V + DV D
Sbjct: 3 ALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLR-AEGLSVRFHQLDVTD 61
Query: 99 FDAVKTALDEA----GPVDVLVVNQGVFVPG-ELEVQSLDEVRLMIDVNITGSFHMIKAA 153
+++ A D G +D+LV N G+ G + + ++ R + N G+ + +A
Sbjct: 62 DASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQAL 121
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWT 180
LPL+KK G I +SS G +
Sbjct: 122 LPLLKKSPAG---RIVNVSSGLGSLTS 145
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 5e-14
Identities = 64/231 (27%), Positives = 93/231 (40%), Gaps = 47/231 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITG SSGIG A A A+EGA+V + AR +L++ I+ A G E + D
Sbjct: 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR-AEGGEAVALAGD 63
Query: 96 VRDFD----AVKTALDEAGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMI 150
VRD V A++ G +D+ N G G + SL+ R + N+T +F
Sbjct: 64 VRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGA 123
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
K +P + R G S+ S+ G ++G
Sbjct: 124 KHQIPAMLARGGG---SLIFTSTFVGH-------------------TAG----------- 150
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
G + ASK GL GL + L E A I V+ + P T+TP
Sbjct: 151 --------FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP 193
|
Length = 254 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 6e-14
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+KD+ +TGGS GIG A+ ++ +EG+ V V +
Sbjct: 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP--SYND----------VDYFKV 51
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV + + V +D G +D+LV N G+ G + DE +I+VN+ G F M
Sbjct: 52 DVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMS 111
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
K +P + K+ G +IA + S A
Sbjct: 112 KYTIPYMLKQDKGVIINIASVQSFAVT 138
|
Length = 258 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 6e-14
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V++TG + GIG A+A + GA+V ++ E AT+ DV D
Sbjct: 11 VWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE----------DYPFATFVLDVSDA 60
Query: 100 DAVKTA----LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
AV L E GP+DVLV G+ G + S ++ + VN G+F++ +A +P
Sbjct: 61 AAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMP 120
Query: 156 LIKKRQNGGPASIALMSSQA 175
+++++G +I + S A
Sbjct: 121 QFRRQRSG---AIVTVGSNA 137
|
Length = 252 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 7e-14
Identities = 57/221 (25%), Positives = 89/221 (40%), Gaps = 46/221 (20%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSADVRD 98
+ ITG SSG+G +A + A +G +++ AR +LEE K + GI+VA + DV D
Sbjct: 5 ILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVND 64
Query: 99 FDAVKTAL----DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
D V DE G +D ++VN G+ L + + N + +AA+
Sbjct: 65 HDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAM 124
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
I + Q G + L+SS + ++G+ K +
Sbjct: 125 E-IFREQGSG--HLVLISSVSA---------VRGLPGVKAAYA----------------- 155
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
ASK G+ L E L+ E+ I VS I P
Sbjct: 156 ------------ASKAGVASLGEGLRAELAKTPIKVSTIEP 184
|
Length = 248 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 8e-14
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF-- 99
+TG GIG A+A + +G RV SG + T +V DV D
Sbjct: 7 VTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEE 66
Query: 100 --DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
+A+ +E GPVD+LV N G+ + S E +I+ N+ F++ + +
Sbjct: 67 CAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAM 126
Query: 158 KKRQNGGPASIALMSSQAGQ 177
++ G +I+ ++ GQ
Sbjct: 127 CEQGYGRIINISSVNGLKGQ 146
|
Length = 245 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 8e-14
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ ITGG+SGIGLALA + + G V I R+ ++L EAK E+ T DV D
Sbjct: 8 ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP-----EIHTEVCDVADR 62
Query: 100 DA----VKTALDEAGPVDVLVVNQGVFVPGELEV--QSLDEVRLMIDVNITGSFHMIKAA 153
D+ V+ E ++VL+ N G+ +L LD+ I N+ +
Sbjct: 63 DSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALL 122
Query: 154 LPLIKKRQNG 163
LP + ++
Sbjct: 123 LPHLLRQPEA 132
|
Length = 245 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 1e-13
Identities = 59/268 (22%), Positives = 95/268 (35%), Gaps = 50/268 (18%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ R +TG S GIG A+A + G +V AR K+E Q A + Y D
Sbjct: 5 RGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQCD 64
Query: 96 VRD-------FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
+ + F A++T + VDV + N G+ P L + + M DVN+
Sbjct: 65 LSNEEQILSMFSAIRT---QHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSI 121
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVT 208
+ A +K+R N I ++S +G H
Sbjct: 122 CTREAYQSMKER-NVDDGHIININSMSG-----------------------------HRV 151
Query: 209 SWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIFPPDTETPGLEEE 266
+ + A+K + L E L+QE+ I + I P ET +
Sbjct: 152 PPVSVFHFYA--------ATKHAVTALTEGLRQELREAKTHIRATSISPGLVETEFAFKL 203
Query: 267 NKRRPRLTSIIAASSGAMKADEVAKKAL 294
+ P + S +K ++VA L
Sbjct: 204 HDNDPEKAAATYESIPCLKPEDVANAVL 231
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 2e-13
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 48/229 (20%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TGG+ GIG +A + AK+G V++ + + +E + I A G VA Y DV D D
Sbjct: 5 VTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVA-YKLDVSDKDQ 63
Query: 102 VKTALDEA----GPVDVLVVNQGV-FVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
V +A+D+A G DV+V N GV + LE+ +E++ + +VN+ G I+AA
Sbjct: 64 VFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITE-EELKKVYNVNVKGVLFGIQAAARQ 122
Query: 157 IKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQ 216
KK+ +GG K IN +S GH G + S
Sbjct: 123 FKKQGHGG----------------------KIIN-----AASIAGHEGNPILS------- 148
Query: 217 FCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
+ ++KF +RGL + QE+ I V+ P +TP EE
Sbjct: 149 -------AYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE 190
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 68.9 bits (168), Expect = 2e-13
Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 50/268 (18%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TGG+ GIG A+ A+EGA+V I S K+ E + G +V ADV +
Sbjct: 11 VTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVED 70
Query: 102 VKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
++EA G VD+LV N G+ + + ++ +IDVN++ F+ A LP I
Sbjct: 71 ANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYI 130
Query: 158 KKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQF 217
+ + G SI+ + QAG G G Y
Sbjct: 131 TEAEEGRIISISSIIGQAG----------------------GFGQTNYS----------- 157
Query: 218 CLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP--DTETPGLEEENKRRPRLTS 275
A+K G+ G ++L E+ ++ V+ I P DTE E R+ +
Sbjct: 158 ---------AAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAK 208
Query: 276 IIAASSGAMKADEVAKKALDGIKSGSFI 303
I G +ADE+AK + + G++I
Sbjct: 209 IPKKRFG--QADEIAKGVVYLCRDGAYI 234
|
Length = 247 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 2e-13
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSIL---ARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
+TGG+SGIGLA+A + A EGA V + +K+ EA Q A G++ DV
Sbjct: 6 VTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQC-----DVTS 60
Query: 99 FDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
V++A ++A G +D++V N G+ + SL++ +D+N+TG F + + A
Sbjct: 61 EAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAF 120
Query: 155 PLIKKRQNGG 164
++K + GG
Sbjct: 121 RIMKSQGIGG 130
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-13
Identities = 59/225 (26%), Positives = 83/225 (36%), Gaps = 50/225 (22%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG S GIG A+A + A +G V++ A S +E I+ A G +A ADV D
Sbjct: 9 IVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIA-VQADVADA 67
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
AV D A G +DVLV N GV G + L++ I N+ G+F +++ A
Sbjct: 68 AAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAAR 127
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
G I L +S G+G Y
Sbjct: 128 ----HLGQGGRIINLSTSVIALPL--------------------PGYGPY---------- 153
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
ASK + GL L E+ I V+ + P T
Sbjct: 154 ----------AASKAAVEGLVHVLANELRGRGITVNAVAPGPVAT 188
|
Length = 245 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 2e-13
Identities = 74/286 (25%), Positives = 109/286 (38%), Gaps = 66/286 (23%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
ITG +SG GLA A A G ++ + L+ A ++ A G EV DV D
Sbjct: 11 ITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELR-AQGAEVLGVRTDVSDAAQ 69
Query: 102 V----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
V AL+ G V +L N GV G + SL + ++ VN+ G H ++A PL+
Sbjct: 70 VEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLM 129
Query: 158 KKRQNGGPAS---IALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
PA I +S AG + M G Y+V
Sbjct: 130 LAAAEKDPAYEGHIVNTASMAG---LLAPPAM----------------GIYNV------- 163
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQ--EVIADDIHVSLIFPPDTETPGLEEENKRRP- 271
SK + L E L Q ++ D + S++ P T G+ + + RP
Sbjct: 164 -------------SKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPT-GIWQSERNRPA 209
Query: 272 -------RLTSIIAA--------SSGAMKADEVAKKALDGIKSGSF 302
S + A SG + A+EVA+ D I++G F
Sbjct: 210 DLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAIRAGRF 255
|
Length = 287 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 3e-13
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-- 98
+TG GIG A+A + ++G +V+I+ + + + A + G +A ADV D
Sbjct: 6 LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIA-VKADVSDRD 64
Query: 99 --FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
F AV+ +D G ++V+V N GV +E + ++ + ++N+ G I+AA
Sbjct: 65 QVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEA 124
Query: 157 IKKRQNGGPASIALMSSQAGQ 177
KK +GG I +SQAG
Sbjct: 125 FKKLGHGG--KIINATSQAGV 143
|
Length = 256 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 3e-13
Identities = 74/267 (27%), Positives = 105/267 (39%), Gaps = 67/267 (25%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI------LARSGKKLEEAK---QSIQLATG 86
R V +TG G+G A A A+ GA+V + SGK A I+ A G
Sbjct: 4 DGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGG 63
Query: 87 IEVATYSADVRDFDA-VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITG 145
VA Y V D + VKTA+D G VD+LV N G+ S ++ L++ V++ G
Sbjct: 64 KAVANYD-SVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHLKG 122
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY 205
SF + +AA P ++K++ G I NT SS G
Sbjct: 123 SFKVTRAAWPYMRKQKFG----------------RIINT------------SSAAG---- 150
Query: 206 HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
L G F G + A+K GL GL+ L E +I + I P
Sbjct: 151 -------LYGNF---GQANYSAAKLGLLGLSNTLAIEGAKYNITCNTIAP---------- 190
Query: 266 ENKRRPRLTSIIAASSG--AMKADEVA 290
R+T + A+K + VA
Sbjct: 191 --AAGSRMTETVMPEDLFDALKPEYVA 215
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 3e-13
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
+ + +TGG+SGIG A+A A +GARV++L RS E+ + G
Sbjct: 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS----EDVAEVAAQLLGGNAKGLV 67
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV D +V+ A+ G +D+LV + GV + E S ++ ID+N+ GSF M
Sbjct: 68 CDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLM 127
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAG 176
+A + G I ++SQAG
Sbjct: 128 AQAVGRHMIAAGGG---KIVNLASQAG 151
|
Length = 255 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 3e-13
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 11/133 (8%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSI--LARSGKKLEEAKQSIQLATGIEVATY 92
+K + ITGG SGIG A+A AKEGA ++I L E KQ ++ G++
Sbjct: 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDA-NETKQRVE-KEGVKCLLI 101
Query: 93 SADVRD--F--DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRL--MIDVNITGS 146
DV D F DAV+ + E G +D+LV N P + ++ + +L NI
Sbjct: 102 PGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQ-SLEDITAEQLDKTFKTNIYSY 160
Query: 147 FHMIKAALPLIKK 159
FHM KAALP +K+
Sbjct: 161 FHMTKAALPHLKQ 173
|
Length = 290 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 68.0 bits (166), Expect = 4e-13
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+KD+ +TGG GIG A + A+EGA+V++ + + E+ I+ A G ++
Sbjct: 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIR-AKGGNAQAFAC 59
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+ D D+V TA+ A GPVDVLV N G G +I +N+TG+ HM
Sbjct: 60 DITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMH 119
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
A LP + +R G +IA +++ G
Sbjct: 120 HAVLPGMVERGAGRIVNIASDAARVG 145
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 6e-13
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGI 87
P + R V ITGG+ GIG A+A + A G R+ I+ R E AK+ +
Sbjct: 260 QAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA---EGAKKLAEALGD- 315
Query: 88 EVATYSADVRDFDAVKTALDEA----GPVDVLVVNQG---VFVPGELEVQSLDEVRLMID 140
E + AD+ D AV++A + G +DVLV N G VF P QS ++ + D
Sbjct: 316 EHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKP--SLEQSAEDFTRVYD 373
Query: 141 VNITGSFHMIKAALPLIKK 159
VN++G+F +AA L+ +
Sbjct: 374 VNLSGAFACARAAARLMSQ 392
|
Length = 520 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 7e-13
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSAD 95
+ ITG S GIGLA+A + GA V I+AR L +A+ + + EV +AD
Sbjct: 9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAAD 68
Query: 96 VRD-------FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
V D D V+ D + +LV N G + + DE R + + N+ +F
Sbjct: 69 VSDDEDRRAILDWVE---DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFE 125
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAG 176
+ + A PL+K+ + +I + S +G
Sbjct: 126 LSRYAHPLLKQHASS---AIVNIGSVSG 150
|
Length = 257 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 9e-13
Identities = 58/167 (34%), Positives = 77/167 (46%), Gaps = 25/167 (14%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSIL---ARSGKKLEEAKQSIQLATGIEVAT 91
+ R ITGG SGIGLA A + A EGA V + +GK + G+ V T
Sbjct: 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADE------VGGLFVPT 58
Query: 92 YSADVRDFDAVK----TALDEAGPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITG 145
DV D DAV TA + G VD+ N G+ P + LD + + DVN+T
Sbjct: 59 ---DVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTS 115
Query: 146 SFHMIKAALPLIKKRQNGG---PAS-IALMSSQAGQCWTIKNTNMKG 188
+ KAALP + ++ G AS +A+M S Q I T KG
Sbjct: 116 VYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQ---ISYTASKG 159
|
Length = 255 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 1e-12
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGI 87
P P R R + G SSGIG A A + A G V++ AR +K EE I+ A G
Sbjct: 6 PHPDR-----RPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIR-ADGG 59
Query: 88 EVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNI 143
E + DV D D+VK+ + +A G ++VLV G G+L S ++ + +++
Sbjct: 60 EAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHL 119
Query: 144 TGSFHMIKAALPLIKKRQNG 163
G+ + A LP + +R+ G
Sbjct: 120 VGANRLATAVLPGMIERRRG 139
|
Length = 274 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 1e-12
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96
+ +TG S GIG ALA + K G + V +LARS + L+E K+ ++ G+ V T AD+
Sbjct: 1 VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELR--PGLRVTTVKADL 58
Query: 97 RDFDAVKTALDEAGPVDV----LVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIK 151
D V+ L+ +D L+ N G P ++E LDE++ D+N+T +
Sbjct: 59 SDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118
Query: 152 AALPLIKKR 160
L KKR
Sbjct: 119 TLLRAFKKR 127
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 2e-12
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRD 98
+TG + IG A+A A EG RV + S + + K + A AD+ D
Sbjct: 3 ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELN-ALRNSAVLVQADLSD 61
Query: 99 FDA----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
F A V A G DVLV N F P L S D + +N+ + +I+A
Sbjct: 62 FAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAFA 121
Query: 155 PLIKKRQNG 163
+ +NG
Sbjct: 122 RRLAGSRNG 130
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 2e-12
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + V I G S G+G A+A+ A KEGA+V I +R+ KL+ K++ L+ +
Sbjct: 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKT--LSKYGNIHYVVG 60
Query: 95 DVRDFDAVKTALDEAG----PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV ++ + +++A +D LVV G +V E V+ + M+ +I + +
Sbjct: 61 DVSSTESARNVIEKAAKVLNAIDGLVVTVGGYV--EDTVEEFSGLEEMLTNHIKIPLYAV 118
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
A+L +K+ +SI L+SS +G
Sbjct: 119 NASLRFLKE-----GSSIVLVSSMSG 139
|
Length = 238 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 2e-12
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT 91
I ++ + +TG SSG+G A A+ GA+V + +R ++L+E + I+ A G
Sbjct: 4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIE-AEGGAAHV 62
Query: 92 YSADVRDFDAVKTAL----DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF 147
S DV D+ ++K A+ EAG +D+LV N GV +L + + + D N G+F
Sbjct: 63 VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAF 122
Query: 148 HMIKAALPLIKKRQNGGPAS 167
+ + + R G +
Sbjct: 123 FVAQEVAKRMIARAKGAGNT 142
|
Length = 258 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 3e-12
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
R V +TG + GIG A + A+ G +V + R+ ++ E S+ G + + DV
Sbjct: 6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDVS 61
Query: 98 DFDAVKTALDEA----GPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIK 151
D ++ ++ G +DVLV N GV P +L+E + +N+TG++ + +
Sbjct: 62 DEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAR 121
Query: 152 AALPLIKKRQNGGPASIALMSSQAG 176
AL L+ ++ +G A+I ++S AG
Sbjct: 122 EALRLMIEQGHG--AAIVNVASGAG 144
|
Length = 520 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 4e-12
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 13/140 (9%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TG S G+G A+A A+EGARV + E A+ A +A ADVRD
Sbjct: 3 VLVTGASRGLGAAIARSFAREGARVVVNYYRST--ESAEAVAAEAGERAIAI-QADVRDR 59
Query: 100 DAVKTALDEA----GPVDVLVVNQGV---FVP---GELEVQSLDEVRLMIDVNITGSFHM 149
D V+ ++EA GPVD +V N + F P + ++ + ++ + G+ ++
Sbjct: 60 DQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNL 119
Query: 150 IKAALPLIKKRQNGGPASIA 169
++A LP K+R +G +I
Sbjct: 120 LQAVLPDFKERGSGRVINIG 139
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 6e-12
Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TG + GIG A+A + GA V L L E G + DV D
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLE--------YGDPLRLTPLDVADA 52
Query: 100 DAVKT----ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
AV+ L E GP+D LV GV PG + S ++ VN+TG F++++A P
Sbjct: 53 AAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAP 112
Query: 156 LIKKRQNGGPASIALMSSQAGQ 177
+K R+ G A + + S+ A
Sbjct: 113 HMKDRRTG--AIVTVASNAAHV 132
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 8e-12
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLE-EAKQSIQLATGIEVATYSADVRDFD 100
+TG SG G +A + A+EGARV I + E A + A I+ D +
Sbjct: 10 VTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVTKRA--DVE 67
Query: 101 A-VKTALDEAGPVDVLVVNQGV-FVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIK 158
A V+ AL + G +D+LV N G+ + +E + VN+ + +A +P ++
Sbjct: 68 AMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQALVPHME 127
Query: 159 KRQNG---GPASIALMSSQAGQCW 179
++ G AS A + + G W
Sbjct: 128 EQGGGVIINIASTAGLRPRPGLTW 151
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 9e-12
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100
+TGG GIGL +A A G ++I R + A Q A G+EV + ADV D
Sbjct: 6 LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLS 65
Query: 101 A----VKTALDEAGPVDVLVVNQGVFVPG-----ELEVQSLDEVRLMIDVNITGSFHMIK 151
A + A G +D LV N GV V +L +S D V + +N+ G F + +
Sbjct: 66 AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRV---LAINLRGPFFLTQ 122
Query: 152 A---ALPLIKKRQNGGPASIALMSS 173
A + + + SI +SS
Sbjct: 123 AVAKRMLAQPEPEELPHRSIVFVSS 147
|
Length = 256 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (157), Expect = 1e-11
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATY--- 92
KDR + +TG GIG A A+ GA V +L R+ +KLE I+ A G + A
Sbjct: 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLD 70
Query: 93 --SADVRDFDAVKTAL-DEAGPVDVLVVNQ---GVFVP-GELEVQSLDEVRLMIDVNITG 145
+A +++ + + ++ G +D ++ N G P + + + +V + VN+
Sbjct: 71 LLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDV---MQVNVNA 127
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSSQAG 176
+F + +A LPL+ K AS+ SS G
Sbjct: 128 TFMLTQALLPLLLKSPA---ASLVFTSSSVG 155
|
Length = 247 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 1e-11
Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+ V +TG SSGIG A A A+ GARV AR+ L+ +LA DV
Sbjct: 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALD------RLAGETGCEPLRLDVG 63
Query: 98 DFDAVKTALDEAGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
D A++ AL AG D LV G+ L++ + R+M VN G+ + +
Sbjct: 64 DDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVM-AVNARGAALVARHVAR- 121
Query: 157 IKKRQNGGPASIALMSSQAG 176
G SI +SSQA
Sbjct: 122 -AMIAAGRGGSIVNVSSQAA 140
|
Length = 245 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 1e-11
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 15/152 (9%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ +++ ITG + GIG LA A+ GA + I + ++ E A ++ GI+
Sbjct: 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLR-QEGIKAHAAPF 65
Query: 95 DVRDFDAVKTALD----EAGPVDVLVVNQGV-----FVPGELEVQSLDEVRLMIDVNITG 145
+V V+ A++ + GP+DVL+ N G+ F E Q ++V I VN T
Sbjct: 66 NVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFT--EFPEQEWNDV---IAVNQTA 120
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
F + +A + KRQ G +I M S+ G+
Sbjct: 121 VFLVSQAVARYMVKRQAGKIINICSMQSELGR 152
|
Length = 254 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 2e-11
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-LEEAKQSIQLATGIEVATYS 93
+ + F+TG SGIG +A A+ GA V++ L E + I+ A G +
Sbjct: 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIE-AAGRRAIQIA 64
Query: 94 ADVRDFDAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
ADV ++ A+ E G + + V G+ E ++ + ++D+N+TG F
Sbjct: 65 ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLS 124
Query: 150 IKAALPLIKKRQNGGPASIALMS 172
+A + + G +IA MS
Sbjct: 125 CQAEARAMLENGGGSIVNIASMS 147
|
Length = 254 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 3e-11
Identities = 50/144 (34%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
ITG S+GIG A A A+EGA V + + + E I+ G + Y D+ D
Sbjct: 11 ITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGG-KAKAYHVDISDEQQ 68
Query: 102 VKTALDEA----GPVDVLVVNQGVFVPG----ELEVQSLDEVRLMIDVNITGSFHMIKAA 153
VK E G VDVL N GV E V D++ + V++ G+F M K
Sbjct: 69 VKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKI---MAVDMRGTFLMTKML 125
Query: 154 LPLIKKRQNGGPASIALMSSQAGQ 177
LPL+ + GG SI SS +GQ
Sbjct: 126 LPLMME--QGG--SIINTSSFSGQ 145
|
Length = 272 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 3e-11
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVATYS 93
+ + +TGG+ G+G A+A A+ GA + I R+ +K EA+ + A G +
Sbjct: 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEK-GEAQAAELEALGAKAVFVQ 62
Query: 94 ADVRDFDA----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
AD+ D + V A + G +D LV G+ G + S + VN+ F +
Sbjct: 63 ADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFL 122
Query: 150 IKAALPLIKKRQNGGP-ASIALMSSQAGQ 177
++ A+ L+++R+ G +I MS+ GQ
Sbjct: 123 MQEAIKLMRRRKAEGTIVNIGSMSAHGGQ 151
|
Length = 260 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 4e-11
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 7/129 (5%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+KD+ V +TGG+SGIG A++ + A+EGA I RS E A++ L
Sbjct: 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRAL--QPRAEFVQV 62
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+ D + A+++ G +D LV N GV LE + ++ N+ + M
Sbjct: 63 DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLE-AGREAFVASLERNLIHYYVMA 121
Query: 151 KAALPLIKK 159
LP +K
Sbjct: 122 HYCLPHLKA 130
|
Length = 258 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 5e-11
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT 91
R + D+ +TG G+G A+A A+ GA V I AR+ +L+E + I+ A G
Sbjct: 5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIR-AAGRRAHV 63
Query: 92 YSADVRDFDA----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF 147
+AD+ +A A++ G +D++V N G +P L S ++ N+ +
Sbjct: 64 VAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAH 123
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+ AA+PL+ + GG S+ +SS G+
Sbjct: 124 ALTVAAVPLMLEHSGGG--SVINISSTMGR 151
|
Length = 263 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 6e-11
Identities = 42/143 (29%), Positives = 61/143 (42%), Gaps = 12/143 (8%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG +GIG A A + A+EGARV + G + I DV D
Sbjct: 6 AIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI----AGGALALRVDVTDE 61
Query: 100 DAVK----TALDEAGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
V A++E G +D+LV N G + + L + +N+ G+F + A
Sbjct: 62 QQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAA 121
Query: 155 PLIKKRQNGGPASIALMSSQAGQ 177
P + R G SI +SS AGQ
Sbjct: 122 PRMIAR---GGGSIVNLSSIAGQ 141
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 1e-10
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
I G + GIG ALA A G R+ + R L LA + ADV
Sbjct: 1 ALILGATGGIGRALARALAGRGWRLLLSGRDAGALA------GLAAEVGALARPADVAAE 54
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
V E GP+D+LV G + L R ++D N+TG+ ++K AL L+
Sbjct: 55 LEVWALAQELGPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHALALL 112
|
Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 1e-10
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TG + G+G +A A GA V + R+ LE A +++ A G + D+ D +A
Sbjct: 16 VTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR-AAGGAAEALAFDIADEEA 74
Query: 102 VKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
V A E G +D+LV N G L +R +++ ++ + + A +
Sbjct: 75 VAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRM 134
Query: 158 KKRQNGGPASIALMSSQAGQ 177
KRQ G I ++S AGQ
Sbjct: 135 -KRQGYG--RIIAITSIAGQ 151
|
Length = 256 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-10
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT 91
R P+ ++ +T + GIGLA+A + A++GA V + +R + ++ A ++Q G+ V
Sbjct: 5 RDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQ-GEGLSVTG 63
Query: 92 YSADV---RDFDA-VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEV-RLMIDVNITGS 146
V D + V TA++ G VD+LV N V + S +EV ++DVN+ +
Sbjct: 64 TVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKAT 123
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAG 176
M KA +P ++KR G S+ ++SS A
Sbjct: 124 ALMTKAVVPEMEKR---GGGSVVIVSSVAA 150
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-10
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSADVRD 98
V ITG SSG+GLA A A+ G ++A R K E+A Q + + + D+
Sbjct: 4 VVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKD-SYSVLHCDLAS 62
Query: 99 FDAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDE-VRLMIDVNITGSFHMIKAA 153
D+V+ +D P+D LV N V++P E + + L + VN G F +
Sbjct: 63 LDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTNLL 122
Query: 154 LPLIKKRQNGGPASIALMSSQAG 176
L +++ +N I ++ S
Sbjct: 123 LEDLQRSEN-ASPRIVIVGSITH 144
|
Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-10
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSAD 95
DR +TGG SGIG +A GA V I+ R+ KL A + I L V AD
Sbjct: 7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPAD 66
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEV-----RLMIDVNITGS 146
V D D V A+D A G + +V G G + + ++ R +D+N+ G+
Sbjct: 67 VTDEDQVARAVDAATAWHGRLHGVVHCAG----GSETIGPITQIDSDAWRRTVDLNVNGT 122
Query: 147 FHMIK-AALPLIKKRQNGGPASIALMSSQA 175
+++K AA L++ GG S +SS A
Sbjct: 123 MYVLKHAARELVR----GGGGSFVGISSIA 148
|
Length = 276 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 2e-10
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA-KQSIQLATGIEVATYSADVRDFD 100
ITG S GIG A A AA+ G V + + EA Q+I+ G +A +ADV D
Sbjct: 7 ITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAV-AADVADEA 65
Query: 101 AV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRL--MIDVNITGSFHMIKAAL 154
V + E G +D LV N G+ ++ ++ +D RL + N+ GSF + A+
Sbjct: 66 DVLRLFEAVDRELGRLDALVNNAGILEA-QMRLEQMDAARLTRIFATNVVGSFLCAREAV 124
Query: 155 PLIKKRQNGGPASIALMSSQA 175
+ R G +I +SS A
Sbjct: 125 KRMSTRHGGRGGAIVNVSSMA 145
|
Length = 248 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 3e-10
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 32/159 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ + + +TGGSSGIGLA+ + GA V + + +
Sbjct: 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNA-----DIHGGDGQHENYQFVPT----- 56
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPG------------ELEVQSLDEVRLM 138
DV + V + E G +D LV N G+ +P EL + D+ M
Sbjct: 57 DVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDK---M 113
Query: 139 IDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
++N G F M +A + K+ +G I MSS+AG
Sbjct: 114 FNINQKGVFLMSQAVARQMVKQHDG---VIVNMSSEAGL 149
|
Length = 266 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 5e-10
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATY 92
+ +TG S GIG A+A + A+EG +++ ARS K EE + I+ A G +
Sbjct: 1 VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIE-ALGRKALAV 59
Query: 93 SADVRDFDAVK---TALDEA-GPVDVLVVN--QGVFVPG-ELEVQSLDEVRLMIDVNITG 145
A+V D + +K +DE G +DV V N GV P ELE D +++N
Sbjct: 60 KANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWD---WTMNINAKA 116
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSS 173
+ A L++K G S++ + S
Sbjct: 117 LLFCAQEAAKLMEKVGGGKIISLSSLGS 144
|
Length = 250 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 5e-10
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATY-S 93
+ + ITGG+SGIG A A AK GARV I ++A Q++ G ++
Sbjct: 2 LDGKVAIITGGASGIGEATARLFAKHGARVVIADID----DDAGQAVAAELGDPDISFVH 57
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVF--VPGELEVQSLDEVRLMIDVNITGSF 147
DV V+ A+D A G +D++ N GV + SL+E ++DVN+ G+F
Sbjct: 58 CDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAF 117
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAG 176
K A ++ + G SI ++S AG
Sbjct: 118 LGTKHAARVMIPAKKG---SIVSVASVAG 143
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 5e-10
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + ITGG +G A+A + A+ GA+V+IL R+ +K E I+ A G +A A
Sbjct: 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALA-VKA 66
Query: 95 DVRDFDAVKTA----LDEAGPVDVLV 116
DV D ++++ A L++ GP D+L+
Sbjct: 67 DVLDKESLEQARQQILEDFGPCDILI 92
|
Length = 278 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 6e-10
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILAR---SGKKLEEAKQSIQLATGIEVATY 92
D+ V +TGGS GIG + + GA+V AR +G+ LE + A
Sbjct: 8 ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALE---SELNRAGPGSCKFV 64
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSF 147
DV + +KT + G +D LV N G P + + S E R ++++N+ F
Sbjct: 65 PCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYF 124
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAG 176
K ALP ++K Q +I +SS G
Sbjct: 125 LASKYALPHLRKSQ----GNIINLSSLVG 149
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 9e-10
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATY-- 92
+ + ITG + GIG A A +EGARV+I + LE A+ + I A
Sbjct: 1 LDGKTALITGSARGIGRAFAQAYVREGARVAI---ADINLEAARATAAE---IGPAACAI 54
Query: 93 SADVRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
S DV D V +D G +D+LV N +F + + + + +N++G+
Sbjct: 55 SLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLF 114
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQ 177
M++A + + GG I M+SQAG+
Sbjct: 115 MMQAVARAMIAQGRGG--KIINMASQAGR 141
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-09
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+D+ + ITG + IG A GAR+ + + LE+ K+ + V D
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGE---LEVQSLDEVRLMIDVNITGSFH 148
+ +++K ++ G +D+L+ N E ++ +++VN+ G+F
Sbjct: 61 ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAG 176
+A + L KK+ G SI ++S G
Sbjct: 121 CSQAFIKLFKKQGKG---SIINIASIYG 145
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 1e-09
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
D+ +TG + GIG A A A+EGA V + + + E + I +A G D
Sbjct: 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQI-VADGGTAIAVQVD 63
Query: 96 VRDFDAVK----TALDEAGPVDVLVVNQGVFVPGELEVQSLDEV------RLMIDVNITG 145
V D D+ K + G +D LV N ++ G +++ L V + M VN+ G
Sbjct: 64 VSDPDSAKAMADATVSAFGGIDYLVNNAAIY--GGMKLDLLITVPWDYYKKFM-SVNLDG 120
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSSQA 175
+ +A + KR G +I SS A
Sbjct: 121 ALVCTRAVYKHMAKRGGG---AIVNQSSTA 147
|
Length = 250 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 1e-09
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ V ITG +SGIGLA A +GA+V + KQ +G D
Sbjct: 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGV---------DKQDKPDLSG-NFHFLQLD 53
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGV---FVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
+ D ++ D VD+L G+ + P L SL+E + + D N+T +F + +A
Sbjct: 54 LS--DDLEPLFDWVPSVDILCNTAGILDDYKP--LLDTSLEEWQHIFDTNLTSTFLLTRA 109
Query: 153 ALPLIKKRQNGGPASIALMSSQAG 176
LP + +R++G I M S A
Sbjct: 110 YLPQMLERKSG---IIINMCSIAS 130
|
Length = 235 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 1e-09
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TG ++G G + + ++G +V R ++L+E K + G + DVR+
Sbjct: 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNR 58
Query: 100 DAVKTALDEAGP----VDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMIKAAL 154
A++ L +DVLV N G+ + E S+++ MID N G +M +A L
Sbjct: 59 AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 155 PLIKKRQNG 163
P + +R +G
Sbjct: 119 PGMVERNHG 127
|
Length = 248 |
| >gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 1e-09
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 14/143 (9%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ I G +S I A A + A GAR+ + AR ++LE ++ + V+T+ D+ D
Sbjct: 4 ILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDT 63
Query: 100 DAVKTALDEAGPV-DVLVVNQGVFVPGELEVQ-----SLDEVRLMIDVNITGSFHMIKAA 153
+ LD + D++++ G L Q N G ++
Sbjct: 64 ASHAAFLDSLPALPDIVLI-----AVGTLGDQAACEADPALALREFRTNFEGPIALLTLL 118
Query: 154 LPLIKKRQNGGPASIALMSSQAG 176
+ R +G +I +SS AG
Sbjct: 119 ANRFEARGSG---TIVGISSVAG 138
|
Length = 243 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 2e-09
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ + ITG S+GIG +A + GA+V+I AR LE+ I +G +V
Sbjct: 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIG-TSGGKVVPVCC 65
Query: 95 DVRDFDAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV V + LD E G +D+ V N G+ + L+E + + + N+TG F
Sbjct: 66 DVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTA 125
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
+AA + K+ GG I +S +G
Sbjct: 126 QAAAKAMVKQGQGG--VIINTASMSGH 150
|
Length = 253 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 2e-09
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ + V +TGGS GIG +A + GARV I AR + +A + L+ E A
Sbjct: 4 VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEE--LSAYGECIAIPA 61
Query: 95 DVRDFDAVKTALDEAGPV----DVLVVNQGVFVPGELE---VQSLDEVRLMIDVNITGSF 147
D+ + ++ + DVLV N G LE D+V +D+N+ F
Sbjct: 62 DLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKV---MDINVKSVF 118
Query: 148 HMIKAALPLIKKRQNGG-PASIALMSSQAG 176
+ +A LPL++ PA + + S AG
Sbjct: 119 FLTQALLPLLRAAATAENPARVINIGSIAG 148
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 2e-09
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TG S GIG A+A++ A +G + + SG+ E+ S A G DV D
Sbjct: 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADR 60
Query: 100 DAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK-AAL 154
A +T L+ E G +V+N G+ S ++ ++I N+ G +++I +
Sbjct: 61 VACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTM 120
Query: 155 PLIKKRQNGGPASIALMSSQAG 176
P+I+ RQ G ++A +S G
Sbjct: 121 PMIRARQGGRIITLASVSGVMG 142
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL--ATGIEV 89
R P + V +TG SGIG A A+EGA V S A+++ +L A G
Sbjct: 310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVA---SDIDEAAAERTAELIRAAGAVA 366
Query: 90 ATYSADVRDFDAVK----TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITG 145
Y DV D DA++ E G D++V N G+ + G S ++ ++DVN+ G
Sbjct: 367 HAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWG 426
Query: 146 SFH 148
H
Sbjct: 427 VIH 429
|
Length = 582 |
| >gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-09
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSI-----LARSGKKLEEAKQSIQLATGIEVATY 92
R ++TGG GIG ++ + K+G +V R K LE+ K A G +
Sbjct: 4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQK-----ALGFDFIAS 58
Query: 93 SADVRDFDAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
+V D+D+ K A D E G +DVLV N G+ + ++ +ID N+T F+
Sbjct: 59 EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFN 118
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+ K + + +R G +I+ ++ Q GQ
Sbjct: 119 VTKQVIDGMVERGWGRIINISSVNGQKGQ 147
|
Length = 246 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 3e-09
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 33 IPIKDRHVF-ITGGSSGIGLALA-HQAAKEGARVSILARSGKKLEEAKQSIQL----ATG 86
P+K V+ +TGG+ GIG ALA A + GAR+ +L RS EE ++ L A G
Sbjct: 200 APLKPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALG 259
Query: 87 IEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVN 142
V SADV D AV+ L++ G +D ++ GV L ++ ++ ++
Sbjct: 260 ARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPK 319
Query: 143 ITGSFHMIKA 152
+ G ++ +A
Sbjct: 320 VDGLLNLAQA 329
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 3e-09
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ DR + +TG S GIG A A+ GA V +L R+ +KL + I G + +
Sbjct: 2 LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61
Query: 95 DVRDFDA------VKTALDEAGPVDVLVVNQG-VFVPGELEVQSLDEVRLMIDVNITGSF 147
D+ + + +D ++ N G + L Q+ + + VN+ +F
Sbjct: 62 DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATF 121
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+ +A LPL+ K G S+ SS G+
Sbjct: 122 MLTQALLPLLLKSDAG---SLVFTSSSVGR 148
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 4e-09
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TGG++GIG A+A AK GA V I + E +IQ A G + +
Sbjct: 2 AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61
Query: 100 D---AVKTALDEAGPVDVLVVNQGVFVPGELEV-QSLDEVRLMIDVNITGSFHMIKAALP 155
D VK + + G + +LV N G P ++ + ++ +N+ +F + + P
Sbjct: 62 DLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCAP 121
Query: 156 LIKKRQNGGPASIALMSS 173
++K G +I+ MSS
Sbjct: 122 HMQKAGGGAILNISSMSS 139
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 4e-09
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K++ ITGG+ +G A+A A+ GA+V+ L R+ +K ++ + I A G +A
Sbjct: 3 LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEIT-ALGGRAIALAA 61
Query: 95 DVRDFDAVKTALDE----AGPVDVLVVNQGVFVPG------------ELEVQSLDE--VR 136
DV D +++ A +E G VD+L+ G P E LDE
Sbjct: 62 DVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWE 121
Query: 137 LMIDVNITGSF 147
+ D+N+ GSF
Sbjct: 122 FVFDLNLNGSF 132
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 4e-09
Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 58/245 (23%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
+ + V +TG + GIG +A + A EGARV ++ RS E + LA G ++
Sbjct: 1 RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVLAE--ILAAGDAAHVHT 58
Query: 94 ADVRDFD----AVKTALDEAGPVDVLVVNQG--VFVPGELEVQSLDEVRLMIDVNITGSF 147
AD+ + V+ A++ G VDVL+ N G ++ E +++ I ++ +
Sbjct: 59 ADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAK-PYEHYEEEQIEAEIRRSLFPTL 117
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHV 207
+A LP + +RQ G I N SS G Y +
Sbjct: 118 WCCRAVLPHMLERQQG----------------VIVNV------------SSIATRGIYRI 149
Query: 208 TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267
+ A+K G+ L +L E D I V+ + P TE P
Sbjct: 150 P----------------YSAAKGGVNALTASLAFEHARDGIRVNAVAPGGTEAP-----P 188
Query: 268 KRRPR 272
++ PR
Sbjct: 189 RKIPR 193
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 5e-09
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATY 92
+ I ++ V +TGGS G+G A+A A+EGARV + + + E+A +++ G
Sbjct: 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVV---NYHQSEDAAEALADELGDRAIAL 57
Query: 93 SADVRDFDAVKTALDEA-----GPVDVLVVNQGV---FVPG---ELEVQSLDEVRLMIDV 141
ADV D + V+ A P+ +V N F + + + ++ + ++
Sbjct: 58 QADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEG 117
Query: 142 NITGSFHMIKAALPLIKKRQNG 163
++ G+ + I+AALP ++++ G
Sbjct: 118 SVKGALNTIQAALPGMREQGFG 139
|
Length = 253 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 5e-09
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 11/134 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSA 94
+ ITGG+ IG A+A G RV+I S + + + A A
Sbjct: 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64
Query: 95 DVRDFDA----VKTALDEAGPVDVLVVNQGVFVP---GELEVQSLDEVRLMIDVNITGSF 147
D+ D DA V + G +D LV N F P G + D+ + N+ F
Sbjct: 65 DLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDD---LFASNLKAPF 121
Query: 148 HMIKAALPLIKKRQ 161
+ +AA P ++K++
Sbjct: 122 FLSQAAAPQLRKQR 135
|
Length = 249 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 5e-09
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 40 VFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQL--ATGIEVATYSADV 96
ITGG G+G ALA A+ GAR + +L+RSG A + A G V + DV
Sbjct: 3 YLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACDV 62
Query: 97 RDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
D DA+ L GP+ ++ GV G L + + ++ G++++ +
Sbjct: 63 ADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNLHEL 122
Query: 153 ALPL 156
L
Sbjct: 123 TADL 126
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 5e-09
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R V +TGG+ GIG +A GA V + R + + G ++AD
Sbjct: 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR---------APETVDGRPAEFHAAD 55
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
VRD D V +D G +DVLV N G S ++++N+ + +
Sbjct: 56 VRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQ 115
Query: 152 AALPLIKKRQNGGPASIALMSSQAG 176
AA +++++ GG SI + S +G
Sbjct: 116 AANAVMQQQPGGG--SIVNIGSVSG 138
|
Length = 252 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 6e-09
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 40 VFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQL--ATGIEVATYSADV 96
+TGG G+GL LA A+ GAR + +L+RSG EA+ + A G EV + DV
Sbjct: 3 YLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDV 62
Query: 97 RDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
D DAV+ L E P+ ++ GV L + ++ ++ +TG+++
Sbjct: 63 SDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWN 118
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 6e-09
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R V +TG + GIGLAL+ + A G +V +ARS +I G A AD
Sbjct: 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS---------AIDDFPGELFACDLAD 52
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+ A ++E PVD +V N G+ +P L L ++ + D+N+ + + +A L
Sbjct: 53 IEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLE 112
Query: 156 LIKKRQNG 163
+K R+ G
Sbjct: 113 GMKLREQG 120
|
Length = 234 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 7e-09
Identities = 47/144 (32%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGI------EVATY 92
V ITG S GIG A A AA G V I AR EE +++ A G +VA
Sbjct: 5 VLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE 64
Query: 93 SADVRDFDAVKTALDEAGPVDVLVVNQGVFVPG-ELEVQSLDEVRLMIDVNITGSFHMIK 151
+ + FDAV++A G +D LV N G+ P L +R M D N+ G++ +
Sbjct: 65 ADVIAMFDAVQSAF---GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAR 121
Query: 152 AALPLIKKRQNGGPASIALMSSQA 175
A + + G +I +SS A
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIA 145
|
Length = 248 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 8e-09
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
+ D+ + +TG S G+G +A A GA V ++AR KKLE+ +I A E
Sbjct: 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIR 62
Query: 94 ADV-----RDFDAVKTALDEA--GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITG 145
D+ ++F+ + EA G +D +V G F L+ Q++ E +N
Sbjct: 63 FDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVA 122
Query: 146 SFHMIKAALPLIKK 159
+ +A PL+K+
Sbjct: 123 PMGLTRALFPLLKQ 136
|
Length = 239 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 9e-09
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL--ATGIEVATYSADVR 97
+TGGS GIG A+A + A+ GA V I R K + A + G + ADV
Sbjct: 1 ALVTGGSRGIGKAIALRLAERGADVVINYR--KSKDAAAEVAAEIEELGGKAVVVRADVS 58
Query: 98 D-------FDAVKTALDEAGPVDVLVVN--QGVFVP-GELEVQSLDEVRLMIDVNITGSF 147
F AVK + G +DVLV N G F P EL ++ N+
Sbjct: 59 QPQDVEEMFAAVK---ERFGRLDVLVSNAAAGAFRPLSELT---PAHWDAKMNTNLKALV 112
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179
H + A L+ R+ GG +A+ S + +
Sbjct: 113 HCAQQAAKLM--RERGGGRIVAISSLGSIRAL 142
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 9e-09
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 12/121 (9%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TG S GIG A+A + A G ++I + LA G + AD+ +
Sbjct: 6 VTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGELSD 65
Query: 102 VKTALDEA----GPVDVLVVNQGVFVPG-----ELEVQSLDEVRLMIDVNITGSFHMIKA 152
+ LD+A G +D LV N G+ V +L S D + I +N+ G F + +A
Sbjct: 66 HEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRL---IAINLRGPFFLTQA 122
Query: 153 A 153
Sbjct: 123 V 123
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 1e-08
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVA-TYSA 94
++ + GG +G L H A+EG RV++ + +K Q I G +A + A
Sbjct: 1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60
Query: 95 DVRDFDAVKT---ALDEA-GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D +V +DE G VD+LV N G+ + L + + VN+ G F
Sbjct: 61 DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCA 120
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184
+ L+ + G I ++S++G+ + N+
Sbjct: 121 REFSRLMIRDGIQG--RIIQINSKSGKVGSKHNS 152
|
Length = 259 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 1e-08
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TGG++G+G A AK GA + I+ G +E ++ I+ G +V D+ ++
Sbjct: 20 VTGGNTGLGQGYAVALAKAGADI-IITTHGTNWDETRRLIEKE-GRKVTFVQVDLTKPES 77
Query: 102 ----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
VK AL+E G +D+LV N G L ++ ++D+N+ +H+ +A ++
Sbjct: 78 AEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVM 137
Query: 158 KKRQNGGPASIALM-SSQAG 176
K+ +G +IA M S Q G
Sbjct: 138 AKQGSGKIINIASMLSFQGG 157
|
Length = 258 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 2e-08
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TGG++GIG A A A+EGA+V + R EE I+ A G E + DV
Sbjct: 12 VTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGG-EALFVACDVTRDAE 70
Query: 102 VKTALDEA----GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
VK +++ G +D N G+ + G L S E ++ VN+ G + +K +PL
Sbjct: 71 VKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPL 130
Query: 157 IKKRQNGGPASIALMSSQAG 176
+ Q GG +I +S AG
Sbjct: 131 MLA-QGGG--AIVNTASVAG 147
|
Length = 253 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 2e-08
Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R +TG + GIG ALA + G RV L L + L + D
Sbjct: 1 TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAF--ADALGDA-RFVPVACD 57
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ D ++ AL A GPVDVLV N G L + R +N+ ++ ++
Sbjct: 58 LTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVE 117
Query: 152 AALPLIKKRQNGGPASIA 169
A L + KR G +I
Sbjct: 118 AVLEGMLKRSRGAVVNIG 135
|
Length = 257 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 54/228 (23%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
R + ITG SSGIG A +G RV R EE +++ A G+E + D
Sbjct: 5 RSILITGCSSGIGAYCARALQSDGWRVFATCRK----EEDVAALE-AEGLE--AFQLDYA 57
Query: 98 DFDAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
+ +++ + + G +D L N PG +E + +R + N G + +
Sbjct: 58 EPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRR 117
Query: 153 ALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRE 212
+P+++K+ GQ ++ +++ G+ K G Y+
Sbjct: 118 VIPVMRKQ---------------GQGRIVQCSSILGL-------VPMKYRGAYN------ 149
Query: 213 LSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
ASKF + GL+ L+ E+ IHVSLI P ET
Sbjct: 150 --------------ASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIET 183
|
Length = 277 |
| >gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 28 PKPVRIPIKD---RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QL 83
KP+ I + D + +TG S G+GL LA + A GA V + R+ K E A +I
Sbjct: 2 RKPLDITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTA 61
Query: 84 ATGIEVATYSADVRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMI 139
+++ + D+ +V + E P+ +L+ N GV P E + D L
Sbjct: 62 VPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPE-RQTTADGFELQF 120
Query: 140 DVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175
N G F + LPL++ G A + SS A
Sbjct: 121 GTNHLGHFALTAHLLPLLR----AGRARVTSQSSIA 152
|
Length = 313 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 7e-08
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSIL---ARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
+TGG++GIG ++ K GA+V I+ G+ + ++ L V + DV
Sbjct: 23 VTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDS-----LGGEPNVCFFHCDVTV 77
Query: 99 FDAVKTALDEA----GPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKA 152
D V A+D G +D++V N G+ P ++ L E + DVN+ G F +K
Sbjct: 78 EDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKH 137
Query: 153 ALPLIKKRQNGGPASIALMSSQAG 176
A ++ + G S+ ++S G
Sbjct: 138 AARIMIPLKKGSIVSLCSVASAIG 161
|
Length = 280 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 8e-08
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ V +TG + GIG +A +AA EGARV ++ RS E A + A G E +AD
Sbjct: 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELR--AAGGEALALTAD 64
Query: 96 VRDFD----AVKTALDEAGPVDVLVVNQG 120
+ + A+ A++ G +DVL+ N G
Sbjct: 65 LETYAGAQAAMAAAVEAFGRIDVLINNVG 93
|
Length = 260 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 9e-08
Identities = 55/241 (22%), Positives = 92/241 (38%), Gaps = 56/241 (23%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITG SG G LA + G V LA K + ++ + T DV
Sbjct: 3 VLITGCDSGFGNLLAKKLDSLGFTV--LAGCLTKNGPGAKELRRVCSDRLRTLQLDVTKP 60
Query: 100 DAVKTA-------LDEAGPVDVLVVNQGVFVPGEL-EVQSLDEVRLMIDVNITGSFHMIK 151
+ +K A + E G + LV N G+ G E+ +D+ R ++VN+ G+ + K
Sbjct: 61 EQIKRAAQWVKEHVGEKG-LWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTK 119
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A LPL+++ + + +SS G G Y
Sbjct: 120 AFLPLLRRAK----GRVVNVSSMGG-------------------RVPFPAGGAY------ 150
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD--TETPGLEEENKR 269
C ASK + +++L++E+ + VS+I P + T G E ++
Sbjct: 151 ------C--------ASKAAVEAFSDSLRRELQPWGVKVSIIEPGNFKTGITGNSELWEK 196
Query: 270 R 270
+
Sbjct: 197 Q 197
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 1e-07
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 11/144 (7%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+ +TGG GIG + + G +V EE A G + DV
Sbjct: 2 KVAIVTGGGHGIGKQICLDFLEAGDKVVFADID----EERGADFAEAEGPNLFFVHGDVA 57
Query: 98 DFDAVKTA----LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D VK L++ G +DVLV N G L L+E ++ VN+TG + + +
Sbjct: 58 DETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYC 117
Query: 154 LPLIKKRQNGGPASIALMSSQAGQ 177
+ K I + S++A Q
Sbjct: 118 RDELIK---NKGRIINIASTRAFQ 138
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 1e-07
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG S GIG A+A + A +GA V+I R+ + +E + I+ + G + AD+
Sbjct: 10 LVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIE-SNGGKAFLIEADLNSI 68
Query: 100 DAVKTALDE----------AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
D VK +++ +D+LV N G+ G +E + + ++ VNI F +
Sbjct: 69 DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFL 128
Query: 150 IKAALPLIK 158
I+ LPL++
Sbjct: 129 IQQTLPLLR 137
|
Length = 254 |
| >gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 1e-07
Identities = 31/136 (22%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVA 90
++I + + F T S GIG +A A+ GA V +L+R+ + L++A++ I+ + ++V+
Sbjct: 2 LKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVS 61
Query: 91 TYSADV---RDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF 147
AD+ D + L G D+ + G PG S+++ + + + +
Sbjct: 62 YIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAV 121
Query: 148 HMIKAALPLIKKRQNG 163
++ +A +P ++++ G
Sbjct: 122 YLTRALVPAMERKGFG 137
|
Length = 263 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 1e-07
Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 13/122 (10%)
Query: 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
+ +TGG+ IG L + G V L R L+ V D+ D
Sbjct: 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLS--------GVEFVVLDLTD 53
Query: 99 FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIK 158
D V V++ S + +DVN+ G+ ++++AA
Sbjct: 54 RDLVDELAKGVPDA---VIHLAAQSSVPDSNAS--DPAEFLDVNVDGTLNLLEAARAAGV 108
Query: 159 KR 160
KR
Sbjct: 109 KR 110
|
Length = 314 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 56/265 (21%), Positives = 90/265 (33%), Gaps = 69/265 (26%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF-- 99
+T SGIG A A A++G + I S ++ + + G+ D+ D
Sbjct: 7 VTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPE 66
Query: 100 --DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF--------HM 149
A+ + G +DVLV N G DE R + V++ G+F HM
Sbjct: 67 GAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHM 126
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGG--YHV 207
+K G GG ++
Sbjct: 127 VKQ------------------------------------------------GQGGRIINI 138
Query: 208 TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP--GLEE 265
TS E L G + A+K L GL +A+ E++ I V+ + P TP G+++
Sbjct: 139 TSVHE---HTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD 195
Query: 266 ENKRRPRLTSIIAASSGAMKADEVA 290
+ + I G E+A
Sbjct: 196 SDVKPDSRPGIPLGRPGD--THEIA 218
|
Length = 256 |
| >gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQL-ATGIEVATYSA 94
D ITGG G+GL +A A GAR + +L+R G A ++ L A G V+
Sbjct: 150 DGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRC 209
Query: 95 DVRDFDAVKTALDE---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV D A+ L E GP+ ++ GV L + ++ + G+ ++
Sbjct: 210 DVTDPAALAALLAELAAGGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGALNL 267
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG--IEVATYSADVRD 98
+TG S GIG A+A A++GA V + +R + +I A G +A + ++
Sbjct: 12 LVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQ 71
Query: 99 FDAVKTALDEA-GPVDVLVVNQGV---FVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
DA+ + E G +D+LV N F G + L + +DVNI G F M A
Sbjct: 72 IDALFAHIRERHGRLDILVNNAAANPYF--GHILDTDLGAFQKTVDVNIRGYFFMSVEAG 129
Query: 155 PLIKKRQNGG 164
L+K+ Q GG
Sbjct: 130 KLMKE-QGGG 138
|
Length = 252 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 3e-07
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSI--LARSGKKLEEAKQSIQLATGIEVATY 92
+KDR +TGG SGIG A A A+EGA V+I L + ++ K+ I+ G +
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-GRKAVLL 105
Query: 93 SADVRD----FDAVKTALDEAGPVDV--LVVNQGVFVPGELEVQSLDEVRLMIDVNITGS 146
D+ D V A G +D+ LV + V +P ++ S ++ + +N+
Sbjct: 106 PGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTS-EQFQKTFAINVFAL 164
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
F + + A+PL+ K G + I S QA Q
Sbjct: 165 FWLTQEAIPLLPK----GASIITTSSIQAYQ 191
|
Length = 294 |
| >gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 4e-07
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-----IEVATY 92
R ITG +SGIG A A AK G V ++ R+ + EEA++ I+ +G + +
Sbjct: 2 RSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDM 61
Query: 93 SADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
S + ++ V+ +E + VL+ N G V + E+ D + N G++ +
Sbjct: 62 SDPKQVWEFVEEFKEEGKKLHVLINNAGCMV-NKRELTE-DGLEKNFATNTLGTYILTTH 119
Query: 153 ALPLIKKRQN 162
+P+++K ++
Sbjct: 120 LIPVLEKEED 129
|
Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSI------LARSGKKLEEAKQSIQ--LATGIEV 89
R V +TG GIG A A A EGARV + L S A+ + +A G E
Sbjct: 7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEA 66
Query: 90 ATYSADVRDFDA----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITG 145
D+ D+D V A++ G +DVLV N G+ + S +E +I V++ G
Sbjct: 67 VANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKG 126
Query: 146 SFHMIKAA 153
F ++ A
Sbjct: 127 HFATLRHA 134
|
Length = 286 |
| >gnl|CDD|181162 PRK07904, PRK07904, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 5e-07
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSG-KKLEEAKQSIQLATGIEVATYS 93
+ + + GG+S IGLA+ + K ARV + A + + A ++ A V
Sbjct: 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVID 66
Query: 94 ADVRDFDAVKTALDEA---GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D D D+ +D A G VDV +V G+ E Q+ + + ++N T + +
Sbjct: 67 FDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAA---V 123
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
+ L +K + G I MSS AG+
Sbjct: 124 SVGVLLGEKMRAQGFGQIIAMSSVAGE 150
|
Length = 253 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 6e-07
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 12/161 (7%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96
+ ITG +GIG +A A GA V + + IQ G A D+
Sbjct: 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFAC-RCDI 69
Query: 97 RD----FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
AL + G VD+LV N G P ++ + + R ++N+ FH+ +
Sbjct: 70 TSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDM-PMADFRRAYELNVFSFFHLSQL 128
Query: 153 ALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193
P ++K NGG I ++S A + KN NM +K
Sbjct: 129 VAPEMEK--NGG-GVILTITSMAAEN---KNINMTSYASSK 163
|
Length = 255 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 7e-07
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 74/286 (25%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TG ++G+G +A A+ GA + RS + E +Q ++ A G + +AD+ D +A
Sbjct: 10 VTGANTGLGQGIAVGLAEAGADIVGAGRS--EPSETQQQVE-ALGRRFLSLTADLSDIEA 66
Query: 102 VKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA-ALPL 156
+K +D A G +D+LV N G+ + E S + +++VN+ F + +A A
Sbjct: 67 IKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHF 126
Query: 157 IKKRQNGGPASIA-LMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+K+ + G +IA ++S Q GG V S
Sbjct: 127 LKQGRGGKIINIASMLSFQ----------------------------GGIRVPS------ 152
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275
+ ASK + GL + L E A I+V+ I P T
Sbjct: 153 ---------YTASKHAVAGLTKLLANEWAAKGINVNAIAPGYMAT--------------- 188
Query: 276 IIAASSGAMKADEVAKKA-LDGIKSGSFIVPCNSEG---FLLSIAT 317
++ A++ADE A L+ I +G + P + G FL S A+
Sbjct: 189 ---NNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSAS 231
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 8e-07
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-----IEVATYSADV 96
+TG + GIG A Q A++G + ++AR+ KL++ SIQ V +S D+
Sbjct: 58 VTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDI 117
Query: 97 RD-FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDE--VRLMIDVNITGSFHMIKAA 153
+ +K + E V VL+ N GV P +DE ++ +I VN+ G+ + +A
Sbjct: 118 DEGVKRIKETI-EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAV 176
Query: 154 LPLIKKRQNGGPASI 168
LP + KR+ G +I
Sbjct: 177 LPGMLKRKKGAIINI 191
|
Length = 320 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 9e-07
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +T S GIG +A + K+GARV I +R+ + LE+A + +L EV AD+ D
Sbjct: 3 VLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALK--ELKEYGEVYAVKADLSDK 60
Query: 100 D----AVKTALDEAGPVDVLVVNQG 120
D VK A + G +D LV N G
Sbjct: 61 DDLKNLVKEAWELLGGIDALVWNAG 85
|
Length = 259 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 1e-06
Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 23/138 (16%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ + G + IGLA+A + G V RS Y D+ D
Sbjct: 1 IIVIGATGTIGLAVAQLLSAHGHEVITAGRSS------------------GDYQVDITDE 42
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKK 159
++K ++ G D +V G L + + + ++ + G ++++ LP +
Sbjct: 43 ASIKALFEKVGHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLPYL-- 100
Query: 160 RQNGGPASIALMSSQAGQ 177
G SI L S Q
Sbjct: 101 NDGG---SITLTSGILAQ 115
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-06
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100
+TGGS GIG A A A+EG V++ ++ +E I A G AD+ D +
Sbjct: 6 VTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVL-QADISDEN 64
Query: 101 AVK---TALD-EAGPVDVLVVNQGV-FVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
V TA+D P+ LV N G+ F +E + + + ++ N+TG F + A+
Sbjct: 65 QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK 124
Query: 156 LIKKRQNGGPASIALMSSQA 175
+ + G +I +SS A
Sbjct: 125 RMALKHGGSGGAIVNVSSAA 144
|
Length = 247 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 2e-06
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 50/227 (22%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
R +TG S GIG +A +GA V + +KLE ++ G V + A++
Sbjct: 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLE----ALAAELGERVKIFPANLS 62
Query: 98 DFDAVKT----ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D D VK A + VD+LV N G+ G S ++ +++VN+T +F + +
Sbjct: 63 DRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTREL 122
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
+ +R+ G +I T++ G+ N G Y
Sbjct: 123 THPMMRRRYGRIINI---------------TSVVGVTGN-------PGQANY-------- 152
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
C ASK G+ G +++L QE+ ++ V+ + P E+
Sbjct: 153 ----C--------ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIES 187
|
Length = 245 |
| >gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-06
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSAD 95
+ +TG S GIG A A GA V + R + + I+ A G + AD
Sbjct: 6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIE-AAGGRASAVGAD 64
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDE---VRLMIDVNITGSFH 148
+ D ++V TA +E G +D LV+N G +E +DE +RL D +
Sbjct: 65 LTDEESVAALMDTAREEFGGLDALVLN----ASGGMESG-MDEDYAMRLNRDAQR----N 115
Query: 149 MIKAALPLI 157
+ +AALPL+
Sbjct: 116 LARAALPLM 124
|
Length = 248 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-06
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--TGIEVATY 92
+KD+ V +TG GIG A+A + AKEG+ V + A+ K+ EE +++++ G E
Sbjct: 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK--KRAEEMNETLKMVKENGGEGIGV 61
Query: 93 SADVRDFDA----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDE-VRLMIDVNITGSF 147
ADV + K +D G D+LV N G+ + + D+ + I +
Sbjct: 62 LADVSTREGCETLAKATIDRYGVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVI 120
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAG 176
+ + +++ GG +I ++S AG
Sbjct: 121 YCSQELAKEMRE---GG--AIVNIASVAG 144
|
Length = 252 |
| >gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS---ADV 96
V ITG SSG+GL A AK G V + R+ KK E A Q + GI +Y+ D+
Sbjct: 9 VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL----GIPPDSYTIIHIDL 64
Query: 97 RDFDAVKTALDEAG----PVDVLVVNQGVFVPGELE-VQSLDEVRLMIDVNITGSFHMIK 151
D D+V+ +D+ P+D LV N V++P E ++S L + N G F +
Sbjct: 65 GDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCN 124
Query: 152 AALPLIKK 159
L +KK
Sbjct: 125 LLLEDLKK 132
|
Length = 322 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 3e-06
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-IEVATYSADV 96
+ V ITG ++GIG A + A+ GARV + R K EEA I+ T EV D+
Sbjct: 2 KTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDL 61
Query: 97 RDFDAVK----TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
+++ L E +DVL+ N GV + + D + VN G F +
Sbjct: 62 ASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTE--DGFEMQFGVNHLGHFLLTNL 119
Query: 153 ALPLIKKRQNGGPASIALMSSQA 175
L L+KK P+ I +SS A
Sbjct: 120 LLDLLKK---SAPSRIVNVSSLA 139
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 6e-06
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSI--LARSGKKLEEAKQSIQLATGIEVATYSAD 95
R ITG SGIG A A A+EGA +++ L + E Q IQ A G + D
Sbjct: 56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGD 114
Query: 96 VRD----FDAVKTALDEAGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMI 150
++D V+ A+ E G +D+LV G + + + ++ N+ F +
Sbjct: 115 LKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLC 174
Query: 151 KAALPLIK 158
KAA+P +
Sbjct: 175 KAAIPHLP 182
|
Length = 300 |
| >gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 8e-06
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+ GG +G L H A+ G V++ + + E+ I G + + AD + +
Sbjct: 7 VIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADATNEQS 66
Query: 102 V----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
V K + VD+LV + G+ ++ L + + VN+ G F + L+
Sbjct: 67 VIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAREFSKLM 126
Query: 158 KKRQNGGPASIALMSSQAGQCWTIKNT 184
+ G I ++S++G+ + N+
Sbjct: 127 IRDGIQG--RIIQINSKSGKVGSKHNS 151
|
Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 8e-06
Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 34/145 (23%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ ITG +SGIG A A G V + + A AD+
Sbjct: 2 IVITGAASGIGAATAELLEDAGHTV------------------IGIDLREADVIADLSTP 43
Query: 100 DAVKTALDE-----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
+ A+ + +G +D LV GV L++ VN G +++A L
Sbjct: 44 EGRAAAIADVLARCSGVLDGLVNCAGVGGTTVAG--------LVLKVNYFGLRALMEALL 95
Query: 155 PLIKKRQNGGPASIALMSSQAGQCW 179
P ++K + ++SS AG W
Sbjct: 96 PRLRKGHGP---AAVVVSSIAGAGW 117
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEV 89
P R +FITG S G+GLA A +G V + ARS K+ +AK G
Sbjct: 1 TRSPPPMKR-IFITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAK---AACPGAAG 56
Query: 90 ATYSADVRDFDAVKTALDEA---GPVDVLVVNQGVF 122
D+ + D+ G D ++ N G+
Sbjct: 57 VLI-GDLSSLAETRKLADQVNAIGRFDAVIHNAGIL 91
|
Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260 |
| >gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSADV 96
R +TG ++G+G A A +GA V + R+ K + A I G +V D+
Sbjct: 17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDL 76
Query: 97 RDFDAVKTALDE---AGP-VDVLVVNQGVFVP 124
+V+ A D A P +D+L+ N GV
Sbjct: 77 TSLASVRAAADALRAAYPRIDLLINNAGVMYT 108
|
Length = 306 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 21/128 (16%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSI-QLATGIEVATYS 93
K + + +TGG+ IG L Q K G + + + R KL E + + ++
Sbjct: 1 KGKTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFII 60
Query: 94 ADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLM-------IDVNITGS 146
DVRD + ++ A E GP D+ V + +L V M I N+ G+
Sbjct: 61 GDVRDKERLRRAFKERGP-DI-VFH----------AAALKHVPSMEDNPEEAIKTNVLGT 108
Query: 147 FHMIKAAL 154
++I AA+
Sbjct: 109 KNVIDAAI 116
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TGG SG+GL A+ GA V + AR EA I G+EV D+ D ++
Sbjct: 31 VTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID---GVEVVML--DLADLES 85
Query: 102 VKTA----LDEAGPVDVLVVNQGV 121
V+ LD +D+L+ N GV
Sbjct: 86 VRAFAERFLDSGRRIDILINNAGV 109
|
Length = 315 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGI-EVATYSA-DVRDF 99
+TGG++ IG A+A GARV+I+ +A +A + E A + A D+ D
Sbjct: 11 VTGGATLIGAAVARALVAAGARVAIVDI------DADNGAAVAASLGERARFIATDITDD 64
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
A++ A+ G VD+LV ++ L D + + DVN+ + + +AA P
Sbjct: 65 AAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAAL-DVNLVSAAMLAQAAHP 123
Query: 156 LIKKRQNGGPASIALMSSQAGQ 177
+ R G + +S++ Q
Sbjct: 124 HL-ARGGGAIVNFTSISAKFAQ 144
|
Length = 261 |
| >gnl|CDD|187658 cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 2, complex (x) | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQL-ATGIEVATYSA 94
D ITGG G+GL +A + GAR + + R + L G EV +A
Sbjct: 149 DATYLITGGLGGLGLLVAEWLVERGARHLVLTGRRAPSAAARQAIAALEEAGAEVVVLAA 208
Query: 95 DVRDFDAVKTALDEA 109
DV D DA+ AL +
Sbjct: 209 DVSDRDALAAALAQI 223
|
Ketoreductase, a module of the multidomain polyketide synthase, has 2 subdomains, each corresponding to a short-chain dehydrogenases/reductase (SDR) family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerizes but is composed of 2 subdomains, each resembling an SDR monomer. In some instances, as in porcine FAS, an enoyl reductase (a Rossman fold NAD binding domain of the MDR family) module is inserted between the sub-domains. The active site resembles that of typical SDRs, except that the usual positions of the catalytic asparagine and tyrosine are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular polyketide synthases are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) fatty acid synthase. In some instances, such as porcine FAS , an enoyl reductase module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER). Polyketide syntheses also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes the KR domain of the Lyngbya majuscule Jam J, -K, and #L which are encoded on the jam gene cluster and are involved in the synthesis of the Jamaicamides (neurotoxins); Lyngbya majuscule Jam P belongs to a different KR_FAS_SDR_x subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 376 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 3e-05
Identities = 43/228 (18%), Positives = 68/228 (29%), Gaps = 83/228 (36%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TGGS GIG A+A A G+ K+ + DV
Sbjct: 1 VLVTGGSGGIGGAIARWLASRGS---------PKV--------------LVVSRRDV--- 34
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKK 159
+V N + G L + + I N+ G+ +++AA L+K
Sbjct: 35 ---------------VVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKA 79
Query: 160 RQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCL 219
+ L+SS AG G G G +
Sbjct: 80 K---RLGRFILISSVAG----------------------LFGAPG---------LGGYA- 104
Query: 220 LGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267
ASK L GLA+ E + + + + G+ +
Sbjct: 105 -------ASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMAKGP 145
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 6e-05
Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSA---D 95
V ITG SSG+GL A A G I+A R K E+A +S+ G+ +Y+ D
Sbjct: 6 VIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSL----GMPKDSYTIMHLD 61
Query: 96 VRDFDAVK---TALDEAG-PVDVLVVNQGVFVPGELE-VQSLDEVRLMIDVNITGSFHMI 150
+ D+V+ E+G P+D LV N V+ P E + D L + N G F +
Sbjct: 62 LGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLC 121
Query: 151 KAALPLIKKRQNGGPASIALMS 172
L +K N I + S
Sbjct: 122 NLLLDDLKNSPNKDKRLIIVGS 143
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 38/136 (27%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 2 ADLSFLGFLVLLL-PLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKE 60
LSF L L LT L L+ KP V + G + G+G A A
Sbjct: 113 DGLSFEEAAALPLAGLTAWLALFDRAGLKP------GETVLVHGAAGGVGSAAIQLAKAL 166
Query: 61 GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120
GA V + S +KLE K+ V Y + DF L VDV V++
Sbjct: 167 GATVVAVVSSSEKLELLKE----LGADHVINYREE--DFVEQVRELTGGKGVDV-VLDT- 218
Query: 121 VFVPGELEVQSLDEVR 136
V G+ SL +
Sbjct: 219 --VGGDTFAASLAALA 232
|
Length = 326 |
| >gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATG------IEVATYSA 94
ITG SSG+GLA A A+ G ++A R K E A +S + +++A+ +
Sbjct: 2 ITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDS 61
Query: 95 DVRDFDAVKTALDEAGPVDVLVVNQGVFVP 124
VR F V P+DVLV N V++P
Sbjct: 62 -VRQF--VDNFRRSGRPLDVLVCNAAVYLP 88
|
Length = 308 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 16/115 (13%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ +TG + +G L +G RV L RSG +EV D+ D
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVL-----LDGLPVEVVE--GDLTDA 53
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
++ A+ G D + + + + N+ G+ +++ AAL
Sbjct: 54 ASLAAAM--KG-CDRVFHLAAFTSL------WAKDRKELYRTNVEGTRNVLDAAL 99
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 15/145 (10%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITG SSGIG ALA G V AR + +E + DV D
Sbjct: 4 VLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA-------GFTAVQLDVNDG 56
Query: 100 DAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
A+ + E G +DVL+ N G G L ++ +R + N+ + +A P
Sbjct: 57 AALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP 116
Query: 156 LIKKRQ----NGGPASIALMSSQAG 176
L+++ + N G S L++ AG
Sbjct: 117 LLRRSRGLVVNIGSVSGVLVTPFAG 141
|
Length = 274 |
| >gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + + GG+ +G A A+EGARV ++ R ++ ++A S++ G V +
Sbjct: 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVG--AV 83
Query: 95 DVRDFDAVKTALDEAGPVDVLVVN--QGVFVPGELEVQSLDEVRLMIDVN 142
+ D A A+ A DV+ GV + +L + + + DVN
Sbjct: 84 ETSDDAARAAAIKGA---DVVFAAGAAGVELLEKLA-WAPKPLAVAADVN 129
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194 |
| >gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 54/221 (24%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITG SSGIGL A + + G RV LA K + A+ + TGI + D+ D
Sbjct: 5 VLITGCSSGIGLEAALELKRRGYRV--LAACRKPDDVARMNSLGFTGILL-----DLDDP 57
Query: 100 DAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
++V+ A DE + L N G V G L S ++ N G+ + L
Sbjct: 58 ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLL 117
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
P + G I + SS G L + G+G
Sbjct: 118 PAMLPH---GEGRIVMTSSVMG-----------------LISTPGRG------------- 144
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
+ ASK+ L ++AL+ E+ I VSLI P
Sbjct: 145 ---------AYAASKYALEAWSDALRMELRHSGIKVSLIEP 176
|
Length = 256 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 50/222 (22%), Positives = 80/222 (36%), Gaps = 53/222 (23%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEG----ARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
+ + ITG SG G +A + A++G A V I + EA + + V
Sbjct: 3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR---RGLALRVEKL- 58
Query: 94 ADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D+ D A + VDVL+ N G+ G + ++ VR + + N+ G + +
Sbjct: 59 -DLTDAIDRAQAAEW--DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGF 115
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
+ + R G + SS AG T T
Sbjct: 116 VRKMVARGKG---KVVFTSSMAG-LITGPFT----------------------------- 142
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
G +C ASK L +AEA+ E+ I V+ + P
Sbjct: 143 -GAYC--------ASKHALEAIAEAMHAELKPFGIQVATVNP 175
|
Length = 257 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATY-SADV 96
+ +TGG+ GIG A + + GARV ARS + E + +AD+
Sbjct: 10 KRALVTGGTKGIGAATVARLLEAGARVVTTARS-----------RPDDLPEGVEFVAADL 58
Query: 97 RDFDAVKT----ALDEAGPVDVLVVNQG 120
+ L+ G VD+LV G
Sbjct: 59 TTAEGCAAVARAVLERLGGVDILVHVLG 86
|
Length = 260 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSI-QLATGIEVATY 92
+ + V +TGG IG L Q K + + +R KL + + +++ Y
Sbjct: 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFY 307
Query: 93 SADVRDFDAVKTALDEAGP 111
DVRD D V+ A++
Sbjct: 308 IGDVRDRDRVERAMEGHKV 326
|
Length = 588 |
| >gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V I G S GIG Q +G RV AR A ++Q A G E + DV D
Sbjct: 4 VLIVGASRGIGREFVRQYRADGWRVIATARD----AAALAALQ-ALGAE--ALALDVADP 56
Query: 100 DAVKTALD---EAGPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
+V L + +D V GV+ P +E + ++ ++ N+ G ++ L
Sbjct: 57 ASV-AGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILL 115
Query: 155 PLIKKRQNGGPASIALMSSQAG 176
PL++ GG +A++SS+ G
Sbjct: 116 PLVEAA--GG--VLAVLSSRMG 133
|
Length = 222 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 3e-04
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 14/136 (10%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ--LATGIEVATY 92
+K + +TG S GIG A+A + A +GA V+I G + EEA++++ + G +
Sbjct: 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAI--HYGNRKEEAEETVYEIQSNGGSAFSI 59
Query: 93 SADVRDFDAVK---TALDE-------AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVN 142
A++ V+ ++LD + D+L+ N G+ +E + M+ VN
Sbjct: 60 GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 119
Query: 143 ITGSFHMIKAALPLIK 158
F +I+ AL ++
Sbjct: 120 AKAPFFIIQQALSRLR 135
|
Length = 252 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 3e-04
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 17/143 (11%)
Query: 44 GGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV---RDFD 100
+ I A+A AA+EGA V +L L +LA + DV D D
Sbjct: 3 ADDNSIAWAIAKAAAEEGAEV-VLTTWPPALRMGAVD-ELAKELPADVIPLDVTSDEDID 60
Query: 101 AV-KTALDEAGPVDVLVVNQGVFVPGELEVQSLD----EVRLMIDVNITGSFH-MIKAAL 154
+ + ++ G +D LV + + LD +D++ SF + KAA
Sbjct: 61 ELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAY-SFISLAKAAK 119
Query: 155 PLIKKRQNGGPASIALMSSQAGQ 177
PL+ + GG SI +S A +
Sbjct: 120 PLMNE---GG--SIVALSYIAAE 137
|
Length = 239 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 12/142 (8%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
R I G S G+GL L + + G +V+ R ++ ++Q G+ + +
Sbjct: 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT----ALQALPGVHIEKLDMNDP 57
Query: 98 D-FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRL--MIDVNITGSFHMIKAAL 154
D + L D+L VN G+ P QS + + + +T + I+ A
Sbjct: 58 ASLDQLLQRLQGQ-RFDLLFVNAGISGP---AHQSAADATAAEIGQLFLTNAIAPIRLAR 113
Query: 155 PLIKKRQNGGPASIALMSSQAG 176
L+ + G +A MSSQ G
Sbjct: 114 RLLGQV-RPGQGVLAFMSSQLG 134
|
Length = 225 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 33/150 (22%), Positives = 55/150 (36%), Gaps = 14/150 (9%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYS 93
+ + +TG S GIG +A Q + GA V I R+ +L + I+ G +
Sbjct: 1 LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVR- 59
Query: 94 ADVRDFDAVKTALD-----EAGPVDVLV-----VNQGVFVPGELEVQSLDEVRL--MIDV 141
D D D V+ + + G +D+LV Q + V + +V
Sbjct: 60 CDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNV 119
Query: 142 NITGSFHMIKAALPLIKKRQNGGPASIALM 171
+ + A PL+ K G I+
Sbjct: 120 GLRAHYACSVYAAPLMVKAGKGLIVIISST 149
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|187657 cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 21 LLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGAR--VSILARSGKKLEEAK 78
LL + K + ITGGS G+GL + K GA + IL+RSG K E
Sbjct: 202 LLLDLSILKTNYPINLGKSYLITGGSGGLGLEILKWLVKRGAVENIIILSRSGMKWELEL 261
Query: 79 QSIQL-ATGIEVATYSADVRDFDAVKTALDEA------GPVDVLVVNQGVF 122
+ + I+ S DV D +++ A++ GP+ G+F
Sbjct: 262 LIREWKSQNIKFHFVSVDVSDVSSLEKAINLILNAPKIGPIG------GIF 306
|
NADP-dependent KR domain of the multidomain type I FAS, a complex SDR family. This subfamily also includes proteins identified as polyketide synthase (PKS), a protein with related modular protein architecture and similar function. It includes the KR domains of mammalian and chicken FAS, and Dictyostelium discoideum putative polyketide synthases (PKSs). These KR domains contain two subdomains, each of which is related to SDR Rossmann fold domains. However, while the C-terminal subdomain has an active site similar to the other SDRs and a NADP-binding capability, the N-terminal SDR-like subdomain is truncated and lacks these functions, serving a supportive structural role. In some instances, such as porcine FAS, an enoyl reductase (a Rossman fold NAD-binding domain of the medium-chain dehydrogenase/reductase, MDR family) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER); this KR and ER are members of the SDR family. This KR subfamily has an active site tetrad with a similar 3D orientation compared to archetypical SDRs, but the active site Lys and Asn residue positions are swapped. The characteristic NADP-binding is typical of the multidomain complex SDRs, with a GGXGXXG NADP binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 452 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 41.3 bits (98), Expect = 4e-04
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 40 VFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEE-AKQSIQLATGIEVATYSADVR 97
V +TGG IG L Q K ++ + +R KL E ++ Q ++ + DVR
Sbjct: 1 VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYNDPKLRFFIGDVR 60
Query: 98 DFDAVKTALDEAGP 111
D + ++ A+++ G
Sbjct: 61 DRERLERAMEQHGV 74
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 33/145 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSI---LARSGKKLEEAK-QSIQLATGIEVATYSAD 95
V ITGG+ IG LA K+G V L R G A ++ + G+ D
Sbjct: 3 VLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRF--VHGD 60
Query: 96 VRDFDAVKTA-------LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
+R+ + ++ + A V S RL + N G+ +
Sbjct: 61 IRNRNDLEDLFEDIDLIIHTAAQPSVTT--------------SASSPRLDFETNALGTLN 106
Query: 149 MIKAALPLIKKRQNGGPASIALMSS 173
+++AA RQ+ A S+
Sbjct: 107 VLEAA------RQHAPNAPFIFTST 125
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 8e-04
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITG +SGIG LA AK+G +V R+ L+E + T + DV D
Sbjct: 4 VLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT-----QSANIFTLAFDVTDH 58
Query: 100 DAVKTALDEAGPV-DVLVVNQG---VFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
K AL + + ++ + N G G+++ + V +VN+ G + I+ P
Sbjct: 59 PGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARV---FNVNVLGVANCIEGIQP 115
|
Length = 240 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 8e-04
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+ G + G L + G +V+ L+R+ K + ++A + + DA
Sbjct: 3 VIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAPGVTPVQKDLFDLADLAEALAGVDA 62
Query: 102 V 102
V
Sbjct: 63 V 63
|
Length = 182 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 16/118 (13%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--TGIEVATYSAD 95
R+V ITG S G+G A+A+Q ++G V ++R+ E K+ +LA + +S D
Sbjct: 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRT-----ENKELTKLAEQYNSNLTFHSLD 56
Query: 96 VRD-------FDAVKTALDEAGPVDV-LVVNQGVFVP-GELEVQSLDEVRLMIDVNIT 144
++D F+ + +++ E + L+ N G+ P +E +E+ + +N+
Sbjct: 57 LQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLL 114
|
Length = 251 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 39.7 bits (94), Expect = 0.001
Identities = 29/82 (35%), Positives = 33/82 (40%), Gaps = 20/82 (24%)
Query: 40 VFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADV-- 96
V I GG+SG+G A A Q AK GARV A S +KLE + ADV
Sbjct: 143 VLIHGGASGVGTA-AIQLAKALGARVIATAGSEEKLEACRA------------LGADVAI 189
Query: 97 ----RDFDAVKTALDEAGPVDV 114
DF VDV
Sbjct: 190 NYRTEDFAEEVKEATGGRGVDV 211
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL--ATGIEVATYSADVRDF 99
+TG +G+G +A A+ G + G + E ++I+ A G + +AD+R
Sbjct: 15 VTGCDTGLGQGMALGLAEAGCDIV-----GINIVEPTETIEQVTALGRRFLSLTADLRKI 69
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPG---ELEVQSLDEVRLMIDVNITGSFHMIKA 152
D + L+ A G +D+LV N G+ E + D+V +++NI F M +A
Sbjct: 70 DGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDV---MNLNIKSVFFMSQA 126
Query: 153 ALPLIKKRQNGGP-ASIALMSSQAG 176
A + NGG +IA M S G
Sbjct: 127 AAKHFIAQGNGGKIINIASMLSFQG 151
|
Length = 253 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TG + +G A+ ++G V +L R + G++V D+RD
Sbjct: 3 VLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-------GLDVEIVEGDLRDP 55
Query: 100 DAVKTAL 106
+++ A+
Sbjct: 56 ASLRKAV 62
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ +TGG+ IG L + +EG V +L R + I+ G D+ D
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEG--------DLTDP 52
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
DA++ L E P D V++ + + I N+ G+ +++AA
Sbjct: 53 DALERLLAEVQP-DA-VIHLAAQSGVGASFEDPAD---FIRANVLGTLRLLEAAR 102
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.003
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSAD 95
+ + ITG +SGIG A A GA V + R+ + A I + V + D
Sbjct: 1 GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60
Query: 96 VRDFDAVKTALDE----AGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMI 150
+ +V+ + P+ VLV N VF +P L L+ VN G F+++
Sbjct: 61 LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETT---FQVNHLGHFYLV 117
Query: 151 KAALPLIKKRQNGGPASIALMSSQA 175
+ ++++ PA + ++SS++
Sbjct: 118 QLLEDVLRR---SAPARVIVVSSES 139
|
Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + + ITG IG AL + G V + L E +S+ + +
Sbjct: 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61
Query: 95 -DVRDFDAVKTALDEA----GPVDVLV 116
D+ D ++++ L ++ G +D V
Sbjct: 62 LDITDQESLEEFLSKSAEKYGKIDGAV 88
|
Length = 256 |
| >gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQL--ATGIEVAT 91
+K + V I GG+ +G +A A +GA+ V+I S +A++++ A G +
Sbjct: 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65
Query: 92 YSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF 147
+ AD+ AV+ D+A G D+ + G + + S E M VN +F
Sbjct: 66 FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAF 125
Query: 148 HMIKAA 153
IK A
Sbjct: 126 FFIKEA 131
|
Length = 257 |
| >gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.004
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADV 96
R +TG + IG A+A A G V++ RS + E I+ A G AD+
Sbjct: 10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIR-ALGRRAVALQADL 68
Query: 97 RDFDAVKTALDEA----GPVDVLVVNQGVF 122
D V+ + A GP+ +LV N +F
Sbjct: 69 ADEAEVRALVARASAALGPITLLVNNASLF 98
|
Length = 258 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 366 | |||
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 100.0 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 100.0 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 100.0 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 100.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 100.0 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 100.0 | |
| PLN00015 | 308 | protochlorophyllide reductase | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.98 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.98 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.98 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.98 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.98 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.98 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.97 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.97 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.97 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.97 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.97 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.97 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.97 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.97 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.97 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.97 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.97 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.97 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.97 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.97 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.97 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.96 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.96 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.96 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.96 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.96 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.96 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.94 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.93 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.9 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.88 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.87 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.86 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.84 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.83 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.83 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.81 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.8 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.8 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.79 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.79 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.79 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.78 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.77 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.77 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.76 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.76 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.76 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.76 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.75 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.75 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.74 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.71 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.71 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.68 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.68 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.68 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.67 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.67 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.67 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.67 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.66 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.63 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.63 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.63 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.62 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.6 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.58 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.56 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.55 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.53 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.53 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.53 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.52 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.51 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.49 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.49 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.49 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.46 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.44 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.4 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.4 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.39 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.38 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.32 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.32 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.3 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.3 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.28 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.25 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.25 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.24 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.22 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.22 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.22 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.16 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.07 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.07 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.04 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.01 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.0 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.98 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 98.96 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.93 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 98.85 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.77 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 98.75 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 98.74 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.66 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.61 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.6 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.6 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.55 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.49 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.48 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.44 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.43 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.37 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.27 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.21 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.2 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.15 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.12 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.09 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.08 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.02 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.01 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.95 | |
| PLN00106 | 323 | malate dehydrogenase | 97.92 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.91 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.82 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.79 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.77 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.64 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.6 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.58 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.54 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.49 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.43 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.39 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.36 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.33 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.2 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.18 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.17 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.15 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.15 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.14 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.12 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.11 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.1 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 97.09 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.07 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 97.06 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.05 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.04 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.0 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 96.99 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.95 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.94 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.9 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.88 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 96.88 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.87 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.85 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.83 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.82 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.8 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.77 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.73 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.72 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.69 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.68 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.68 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.67 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.65 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.64 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.64 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.62 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.59 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 96.58 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.58 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.57 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.52 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.5 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.5 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.48 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.44 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.44 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 96.41 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.41 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.38 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.32 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.32 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.3 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.3 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.22 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.19 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.17 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.17 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.14 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.14 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.14 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.14 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.13 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.12 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.11 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.11 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.11 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.1 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 96.09 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.06 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.01 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.98 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.97 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 95.95 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.95 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.93 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 95.93 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 95.92 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 95.89 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.86 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 95.83 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.76 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.65 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 95.64 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.62 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.6 | |
| PLN02494 | 477 | adenosylhomocysteinase | 95.6 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 95.58 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.58 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 95.54 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.53 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 95.51 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 95.49 | |
| PLN02928 | 347 | oxidoreductase family protein | 95.48 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.46 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.45 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.45 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 95.42 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 95.42 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.38 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 95.36 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 95.29 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.28 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.28 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.28 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 95.26 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.21 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 95.2 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 95.17 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.12 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 95.09 | |
| PLN02602 | 350 | lactate dehydrogenase | 95.09 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 95.07 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 95.04 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.04 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 95.02 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 95.01 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 95.0 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 94.99 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.98 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 94.96 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.95 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.95 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 94.95 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 94.9 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 94.9 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 94.9 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 94.88 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 94.88 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 94.88 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.87 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.84 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 94.84 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 94.8 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 94.77 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 94.77 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 94.74 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 94.71 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 94.71 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 94.68 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 94.66 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 94.66 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 94.62 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 94.61 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.6 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.59 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 94.57 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 94.56 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.55 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 94.55 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 94.53 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 94.52 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 94.52 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 94.48 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.47 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.46 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 94.44 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 94.43 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.42 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.4 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 94.35 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 94.34 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 94.32 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 94.31 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 94.29 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 94.29 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 94.29 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.29 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 94.28 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 94.21 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 94.19 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 94.18 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.16 |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-47 Score=324.87 Aligned_cols=242 Identities=29% Similarity=0.337 Sum_probs=219.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
..++.|.++||||++|||++++..|+++|++|++.+++....++++..+... .+...+.||+++.++++..+++
T Consensus 10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~--~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY--GDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC--CccceeeeccCcHHHHHHHHHHHHHh
Confidence 3578899999999999999999999999999999999999888887777532 4667899999999998887665
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++++++|||||+.....+..+..++|++.+.+|+.|.|+++|++.+.|...+. .+.+||++||+.|..
T Consensus 88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~-~~~sIiNvsSIVGki---------- 156 (256)
T KOG1200|consen 88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ-QGLSIINVSSIVGKI---------- 156 (256)
T ss_pred cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC-CCceEEeehhhhccc----------
Confidence 689999999999999888999999999999999999999999999998655432 256999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.-+.. .|++||+++.+|++++|+|++.+|||||+|+||+|.|||+...
T Consensus 157 ------------GN~GQt-----------------nYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m-- 205 (256)
T KOG1200|consen 157 ------------GNFGQT-----------------NYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM-- 205 (256)
T ss_pred ------------ccccch-----------------hhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc--
Confidence 555556 8999999999999999999999999999999999999998763
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
|+++.+.++..+|+||++.+||+++.++||+ ||.++|+||+.+.+|||+.
T Consensus 206 -----------------p~~v~~ki~~~iPmgr~G~~EevA~~V~fLA----S~~ssYiTG~t~evtGGl~ 255 (256)
T KOG1200|consen 206 -----------------PPKVLDKILGMIPMGRLGEAEEVANLVLFLA----SDASSYITGTTLEVTGGLA 255 (256)
T ss_pred -----------------CHHHHHHHHccCCccccCCHHHHHHHHHHHh----ccccccccceeEEEecccc
Confidence 6788899999999999999999999999999 9999999999999999975
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-45 Score=340.59 Aligned_cols=257 Identities=21% Similarity=0.273 Sum_probs=223.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++++|++|++++++++++
T Consensus 3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 35689999999999999999999999999999999999999888888887665566789999999999999988875
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||...+.++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||.++..
T Consensus 83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~---~g~Ii~isS~~~~~---------- 149 (263)
T PRK08339 83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG---FGRIIYSTSVAIKE---------- 149 (263)
T ss_pred hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEEcCccccC----------
Confidence 47899999999987777888999999999999999999999999999998865 58999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|+++|+|+.+|+++++.|++++|||||+|+||+|+|++......
T Consensus 150 ------------~~~~~~-----------------~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~ 200 (263)
T PRK08339 150 ------------PIPNIA-----------------LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQ 200 (263)
T ss_pred ------------CCCcch-----------------hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHH
Confidence 667777 899999999999999999999999999999999999998654321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFV 342 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~ 342 (366)
... .....++++..+.+...+|.||++.|+|++..+.||+ ++.++++||+++.+|||+...+
T Consensus 201 ~~~--------~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~----s~~~~~itG~~~~vdgG~~~~~ 262 (263)
T PRK08339 201 DRA--------KREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLA----SDLGSYINGAMIPVDGGRLNSV 262 (263)
T ss_pred hhh--------hccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHh----cchhcCccCceEEECCCccccC
Confidence 100 0012344555666777889999999999999999999 9999999999999999987543
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=325.22 Aligned_cols=239 Identities=16% Similarity=0.150 Sum_probs=205.5
Q ss_pred CcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 32 RIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
...++||+++||||+ +|||+++|++|+++|++|++++|+. +.++..+++. +.++.++++|++|++++++++++
T Consensus 2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~ 77 (252)
T PRK06079 2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESIERAFATI 77 (252)
T ss_pred ccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHHHH
Confidence 456899999999999 8999999999999999999999983 4444444443 34678999999999999988765
Q ss_pred ---cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
++++|++|||||...+ .++.+.+.++|++++++|+.++++++++++|+|++ .++||++||.++..
T Consensus 78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-----~g~Iv~iss~~~~~--- 149 (252)
T PRK06079 78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-----GASIVTLTYFGSER--- 149 (252)
T ss_pred HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-----CceEEEEeccCccc---
Confidence 5899999999998653 56778999999999999999999999999999964 47999999988876
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.+.+. .|++||+|+.+|+++++.|++++||+||+|+||+|+|+
T Consensus 150 -------------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~ 193 (252)
T PRK06079 150 -------------------AIPNYN-----------------VMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTL 193 (252)
T ss_pred -------------------cCCcch-----------------hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccc
Confidence 666777 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+..... .+++..+.+...+|.+|+++|+|++..+.||+ ++.++++||+++.+|||++
T Consensus 194 ~~~~~~-----------------~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~----s~~~~~itG~~i~vdgg~~ 250 (252)
T PRK06079 194 AVTGIK-----------------GHKDLLKESDSRTVDGVGVTIEEVGNTAAFLL----SDLSTGVTGDIIYVDKGVH 250 (252)
T ss_pred ccccCC-----------------ChHHHHHHHHhcCcccCCCCHHHHHHHHHHHh----CcccccccccEEEeCCcee
Confidence 754311 12344455666778999999999999999999 9999999999999999965
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-44 Score=332.29 Aligned_cols=260 Identities=17% Similarity=0.143 Sum_probs=209.4
Q ss_pred cCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 33 IPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
|.++||+++||||+ +|||+++|++|+++|++|++++|+.+ .++..+++....+.. .++++|++|++++++++++
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence 35689999999997 89999999999999999999999853 233344443333334 6789999999999988765
Q ss_pred --cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 --AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++|||||+..+ .++.+.+.++|++++++|+.+++++++.++|+|++ .++||++||.++..
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-----~g~Iv~isS~~~~~---- 149 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-----GASVLTLSYLGGVK---- 149 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-----CCcEEEEecCCCcc----
Confidence 5899999999998643 56778999999999999999999999999999975 47999999988766
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.+.+. .|++||+|+.+|+++++.|++++|||||+|+||+|+|++
T Consensus 150 ------------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~ 194 (274)
T PRK08415 150 ------------------YVPHYN-----------------VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLA 194 (274)
T ss_pred ------------------CCCcch-----------------hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 666667 899999999999999999999999999999999999986
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFV 342 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~ 342 (366)
..... ..++..+.....+|.+|++.|+|++..+.||+ ++++.++||+++.+|||+..
T Consensus 195 ~~~~~-----------------~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~----s~~~~~itG~~i~vdGG~~~-- 251 (274)
T PRK08415 195 ASGIG-----------------DFRMILKWNEINAPLKKNVSIEEVGNSGMYLL----SDLSSGVTGEIHYVDAGYNI-- 251 (274)
T ss_pred Hhccc-----------------hhhHHhhhhhhhCchhccCCHHHHHHHHHHHh----hhhhhcccccEEEEcCcccc--
Confidence 43210 01112222233568899999999999999999 99999999999999999863
Q ss_pred HHHhh---hhhHHHHHHHHhhc
Q 017757 343 ALCFQ---WNWYGSIEKWHAQG 361 (366)
Q Consensus 343 ~~~~~---~~~~~~~~~~~~~~ 361 (366)
..+++ -...|.+..|+-|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~ 273 (274)
T PRK08415 252 MGMGAVEKEEDGKTVLAWDLQK 273 (274)
T ss_pred cCCCccccccCCceEEeeeccc
Confidence 33333 22336666776554
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=306.60 Aligned_cols=285 Identities=47% Similarity=0.722 Sum_probs=271.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCe-EEEEEecCCCHHHHHHHHHhc----CCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIE-VATYSADVRDFDAVKTALDEA----GPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~-v~~~~~Dls~~~~v~~~~~~~----~~i 112 (366)
+.++|||+++|||+++|.++..+|++|.++.|+.+++++++++++...... +.+..+|++|.+++...+++. +.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 899999999999999999999999999999999999999999998765543 889999999999999999886 799
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|.+|||||...++.+.+.++++++..+++|++++++++++.++.|++... .|+|+++||.++..
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~--~g~I~~vsS~~a~~-------------- 177 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREH--LGRIILVSSQLAML-------------- 177 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcccc--CcEEEEehhhhhhc--------------
Confidence 99999999999999999999999999999999999999999999998653 46999999999998
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+..+++ +|+++|+|+.+|+..+++|+.++||+|.++.|+.++||++++++..+|.
T Consensus 178 --------~i~Gys-----------------aYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~ 232 (331)
T KOG1210|consen 178 --------GIYGYS-----------------AYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPE 232 (331)
T ss_pred --------Cccccc-----------------ccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCch
Confidence 889999 9999999999999999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYG 352 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~~~~~~~~~~~ 352 (366)
.++.+++....+++|++|++++..+.+|++....+..+.+...+..+.+|...+...-.-.+.+|..+.++++.+|.|+.
T Consensus 233 ~t~ii~g~ss~~~~e~~a~~~~~~~~rg~f~~~~~~~g~l~s~~~~~~~p~~~~~~~~l~~i~~~l~Rl~~l~y~~~~~~ 312 (331)
T KOG1210|consen 233 ETKIIEGGSSVIKCEEMAKAIVKGMKRGNFTVSLGFTGFLLSILSQGMSPGDSFSLALLHVIVGGLSRLVSLFYQWKFNT 312 (331)
T ss_pred heeeecCCCCCcCHHHHHHHHHhHHhhcCeEEeechHHHHHHHhhcCCCcchhHHHHHHHHHHhhhhhheeeeeeeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccC
Q 017757 353 SIEKWHAQGKR 363 (366)
Q Consensus 353 ~~~~~~~~~~~ 363 (366)
.|+||.++++.
T Consensus 313 ~irk~~~e~~~ 323 (331)
T KOG1210|consen 313 SIRKCVSERNK 323 (331)
T ss_pred HHhHHhhhccc
Confidence 99999877664
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=322.27 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=209.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++++||+++||||++|||+++|++|+++|++|++++|+.. ++..++++. .+.++.++++|++|++++++++++
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEV 80 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999988643 333344433 256788999999999999988876
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.++++|++++++|+.+++.++++++|+|++++. .|+||++||.++..
T Consensus 81 ~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~--~g~ii~isS~~~~~---------- 148 (251)
T PRK12481 81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN--GGKIINIASMLSFQ---------- 148 (251)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC--CCEEEEeCChhhcC----------
Confidence 589999999999987788888999999999999999999999999999987542 47999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|++||+|+++|+++++.|++++|||||+|+||+++|++......
T Consensus 149 ------------~~~~~~-----------------~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~ 199 (251)
T PRK12481 149 ------------GGIRVP-----------------SYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA 199 (251)
T ss_pred ------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc
Confidence 666666 899999999999999999999999999999999999998654211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++..+.+...+|.+|++.|+|++..+.||+ |+.+.++||+++.+|||++
T Consensus 200 -----------------~~~~~~~~~~~~p~~~~~~peeva~~~~~L~----s~~~~~~~G~~i~vdgg~~ 249 (251)
T PRK12481 200 -----------------DTARNEAILERIPASRWGTPDDLAGPAIFLS----SSASDYVTGYTLAVDGGWL 249 (251)
T ss_pred -----------------ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCcCCceEEECCCEe
Confidence 1223345566789999999999999999999 9999999999999999964
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=321.00 Aligned_cols=249 Identities=26% Similarity=0.275 Sum_probs=216.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++... .+.++.++++|++|++++++++++
T Consensus 3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK07063 3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE 82 (260)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999888888887653 255788999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||......+.+.+.++|++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--------- 150 (260)
T PRK07063 83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG---RGSIVNIASTHAFK--------- 150 (260)
T ss_pred HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC---CeEEEEECChhhcc---------
Confidence 58999999999987766777889999999999999999999999999998765 58999999998776
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+.+++++++.|++++|||||+|+||+++|++.....
T Consensus 151 -------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~ 200 (260)
T PRK07063 151 -------------IIPGCF-----------------PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWW 200 (260)
T ss_pred -------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhh
Confidence 666666 89999999999999999999999999999999999999865432
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
... .+++...+.....++.+|+++|+|++..++||+ ++.+.|+||+++.+|||++.
T Consensus 201 ~~~-------------~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~----s~~~~~itG~~i~vdgg~~~ 256 (260)
T PRK07063 201 NAQ-------------PDPAAARAETLALQPMKRIGRPEEVAMTAVFLA----SDEAPFINATCITIDGGRSV 256 (260)
T ss_pred hcc-------------CChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CccccccCCcEEEECCCeee
Confidence 111 123434445566788999999999999999999 99999999999999999763
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=324.11 Aligned_cols=241 Identities=15% Similarity=0.117 Sum_probs=201.5
Q ss_pred cCCCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 33 IPIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..++||++|||||++ |||+++|++|+++|++|++++|+....+. .+++....+. ..++++|++|++++++++++
T Consensus 3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS-DFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHH
Confidence 347899999999996 99999999999999999999998643333 3333332232 35789999999999988766
Q ss_pred --cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 --AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++|||||+... .++.+.+.++|++++++|+.++++++|+++|+|++ .|+||++||.++..
T Consensus 81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-----~G~Iv~isS~~~~~---- 151 (271)
T PRK06505 81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-----GGSMLTLTYGGSTR---- 151 (271)
T ss_pred HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-----CceEEEEcCCCccc----
Confidence 5899999999998643 46778899999999999999999999999999973 47999999998876
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.+.+. .|++||+|+.+|+++|+.|++++|||||+|+||+|+|++
T Consensus 152 ------------------~~~~~~-----------------~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~ 196 (271)
T PRK06505 152 ------------------VMPNYN-----------------VMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA 196 (271)
T ss_pred ------------------cCCccc-----------------hhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence 667777 999999999999999999999999999999999999987
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..... +.++..+.....++.+|++.|+|++..++||+ |+.+.++||+++.+|||+..
T Consensus 197 ~~~~~-----------------~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~----s~~~~~itG~~i~vdgG~~~ 253 (271)
T PRK06505 197 GAGIG-----------------DARAIFSYQQRNSPLRRTVTIDEVGGSALYLL----SDLSSGVTGEIHFVDSGYNI 253 (271)
T ss_pred cccCc-----------------chHHHHHHHhhcCCccccCCHHHHHHHHHHHh----CccccccCceEEeecCCccc
Confidence 43210 11222333445568899999999999999999 99999999999999999863
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=320.06 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=202.6
Q ss_pred cCCCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 33 IPIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..++||+++||||++ |||+++|++|+++|++|++++|+. ..++..+++....+.. ..+++|++|++++++++++
T Consensus 4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCN-FVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCc-eEEEccCCCHHHHHHHHHHHH
Confidence 457899999999997 999999999999999999999884 3444555554443333 4678999999999988865
Q ss_pred --cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 --AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++|||||.... .++.+.+.++|++++++|+.+++.+++++.|+|++ .|+||++||..+..
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-----~G~Iv~isS~~~~~---- 152 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-----GGSIVTLTYYGAEK---- 152 (260)
T ss_pred HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----CceEEEEecCcccc----
Confidence 5899999999997542 46778899999999999999999999999999964 47999999988765
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+.+|+++++.|++++|||||+|+||+++|++
T Consensus 153 ------------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~ 197 (260)
T PRK06603 153 ------------------VIPNYN-----------------VMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLA 197 (260)
T ss_pred ------------------CCCccc-----------------chhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchh
Confidence 666667 999999999999999999999999999999999999996
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..... ..++..+.+...+|.+|++.|+|++..+.||+ |+.+.|+||+++.+|||+..
T Consensus 198 ~~~~~-----------------~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~----s~~~~~itG~~i~vdgG~~~ 254 (260)
T PRK06603 198 SSAIG-----------------DFSTMLKSHAATAPLKRNTTQEDVGGAAVYLF----SELSKGVTGEIHYVDCGYNI 254 (260)
T ss_pred hhcCC-----------------CcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHh----CcccccCcceEEEeCCcccc
Confidence 43210 11223344556678999999999999999999 99999999999999999753
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=318.79 Aligned_cols=242 Identities=26% Similarity=0.303 Sum_probs=209.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++..+.+|++|++++++++++
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-GGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999998888888777654 46788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.++|++++++|+.+++++++++.|.|.+++. .++|+++||..+...
T Consensus 84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~--------- 152 (253)
T PRK05867 84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ--GGVIINTASMSGHII--------- 152 (253)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC--CcEEEEECcHHhcCC---------
Confidence 589999999999887778888999999999999999999999999999987542 478999999876530
Q ss_pred ccccccccccCCCCC-CccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 189 INENKLCESSGKGHG-GYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
..+ ... .|++||+|+++++++++.|++++||+||+|+||+|+|++....
T Consensus 153 ------------~~~~~~~-----------------~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~- 202 (253)
T PRK05867 153 ------------NVPQQVS-----------------HYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY- 202 (253)
T ss_pred ------------CCCCCcc-----------------chHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc-
Confidence 112 234 8999999999999999999999999999999999999976431
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+..+......+.+|+..|+|++..+.||+ ++.++++||+++.+|||++
T Consensus 203 -------------------~~~~~~~~~~~~~~r~~~p~~va~~~~~L~----s~~~~~~tG~~i~vdgG~~ 251 (253)
T PRK05867 203 -------------------TEYQPLWEPKIPLGRLGRPEELAGLYLYLA----SEASSYMTGSDIVIDGGYT 251 (253)
T ss_pred -------------------hHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CcccCCcCCCeEEECCCcc
Confidence 112233445678899999999999999999 9999999999999999975
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=319.23 Aligned_cols=250 Identities=27% Similarity=0.292 Sum_probs=210.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHh
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
+..+++||+++||||++|||+++|++|++.|++|++++|+.+.+++..+++.... +.++..+.||+++++++++++++
T Consensus 2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999998888876543 35799999999999998877654
Q ss_pred -----cCCCcEEEEcCCCCCCC-CccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 109 -----AGPVDVLVVNQGVFVPG-ELEVQSLDEVRLMIDVNITG-SFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 109 -----~~~id~vi~nAG~~~~~-~~~~~~~~~~~~~~~vN~~~-~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
++++|++|||||..... ++.+.++++|++++++|+.| .+.+.+.+.+++++++ .++|+++||.++..
T Consensus 82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~---gg~I~~~ss~~~~~--- 155 (270)
T KOG0725|consen 82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK---GGSIVNISSVAGVG--- 155 (270)
T ss_pred HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC---CceEEEEecccccc---
Confidence 58999999999988765 78999999999999999995 6666777777777765 68999999998876
Q ss_pred cccCccCccccccccccCCCCCCc-cccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGY-HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.+.. . .|+++|+|+.+|+|++|.||+++|||||+|+||.+.|
T Consensus 156 -------------------~~~~~~~-----------------~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T 199 (270)
T KOG0725|consen 156 -------------------PGPGSGV-----------------AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKT 199 (270)
T ss_pred -------------------CCCCCcc-----------------cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeC
Confidence 43333 5 8999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHH--HHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKK--ALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
++ ....... ...+++.+. ....+|.||++.|+|++..+.||+ +++++|+|||++.+|||+
T Consensus 200 ~~-~~~~~~~-------------~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla----~~~asyitG~~i~vdgG~ 261 (270)
T KOG0725|consen 200 SL-RAAGLDD-------------GEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLA----SDDASYITGQTIIVDGGF 261 (270)
T ss_pred Cc-ccccccc-------------chhhHHhhhhccccccccCCccCHHHHHHhHHhhc----CcccccccCCEEEEeCCE
Confidence 98 2111000 011333333 445679999999999999999999 888779999999999998
Q ss_pred HH
Q 017757 339 IR 340 (366)
Q Consensus 339 ~~ 340 (366)
+.
T Consensus 262 ~~ 263 (270)
T KOG0725|consen 262 TV 263 (270)
T ss_pred Ee
Confidence 74
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=316.59 Aligned_cols=242 Identities=17% Similarity=0.152 Sum_probs=203.1
Q ss_pred CCcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 31 VRIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
+.++++||++|||||+ +|||+++|++|+++|++|++++|+.+..+ ..+++....+ .+.++++|++|++++++++++
T Consensus 4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~ 81 (258)
T PRK07533 4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELD-APIFLPLDVREPGQLEAVFAR 81 (258)
T ss_pred cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhc-cceEEecCcCCHHHHHHHHHH
Confidence 3567899999999998 59999999999999999999999864322 2233332222 356789999999999988765
Q ss_pred ----cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 109 ----AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
++++|++|||||...+ .++.+.+.++|++++++|+.+++++++.++|+|++ .++|+++||..+..
T Consensus 82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-----~g~Ii~iss~~~~~-- 154 (258)
T PRK07533 82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-----GGSLLTMSYYGAEK-- 154 (258)
T ss_pred HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-----CCEEEEEecccccc--
Confidence 5899999999998643 46778899999999999999999999999999964 47999999987765
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.+.+. .|++||+|+.+|+++++.|++++||+||+|+||.++|
T Consensus 155 --------------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T 197 (258)
T PRK07533 155 --------------------VVENYN-----------------LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKT 197 (258)
T ss_pred --------------------CCccch-----------------hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCC
Confidence 556666 8999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
++.+... ..++..+.....++.+|++.|+|++..++||+ ++.+.++||+.+.+|||++
T Consensus 198 ~~~~~~~-----------------~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~----s~~~~~itG~~i~vdgg~~ 255 (258)
T PRK07533 198 RAASGID-----------------DFDALLEDAAERAPLRRLVDIDDVGAVAAFLA----SDAARRLTGNTLYIDGGYH 255 (258)
T ss_pred hhhhccC-----------------CcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHh----ChhhccccCcEEeeCCccc
Confidence 9754321 11333445566778999999999999999999 9999999999999999976
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=318.98 Aligned_cols=242 Identities=17% Similarity=0.169 Sum_probs=203.9
Q ss_pred cCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCch--hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGK--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
++++||+++||||+ +|||+++|++|+++|++|++++|+.+ +.++..+++... +.++.++++|++|++++++++++
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~ 80 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP-LNPSLFLPCDVQDDAQIEETFET 80 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc-cCcceEeecCcCCHHHHHHHHHH
Confidence 46889999999986 89999999999999999999877543 344555555543 33567899999999999988765
Q ss_pred ----cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 109 ----AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
++++|++|||||+... .++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-----~g~Iv~isS~~~~~-- 153 (258)
T PRK07370 81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-----GGSIVTLTYLGGVR-- 153 (258)
T ss_pred HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-----CCeEEEEecccccc--
Confidence 5899999999997642 56778899999999999999999999999999975 47999999988876
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.++.. .|++||+|+.+|+++|+.|++++||+||+|+||+++|
T Consensus 154 --------------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T 196 (258)
T PRK07370 154 --------------------AIPNYN-----------------VMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRT 196 (258)
T ss_pred --------------------CCcccc-----------------hhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccC
Confidence 666777 9999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++...... .++ ..+.+....+.+|++.|+|++..+.||+ |+.++++||+++.+|||++.
T Consensus 197 ~~~~~~~~----------------~~~-~~~~~~~~~p~~r~~~~~dva~~~~fl~----s~~~~~~tG~~i~vdgg~~~ 255 (258)
T PRK07370 197 LASSAVGG----------------ILD-MIHHVEEKAPLRRTVTQTEVGNTAAFLL----SDLASGITGQTIYVDAGYCI 255 (258)
T ss_pred chhhcccc----------------chh-hhhhhhhcCCcCcCCCHHHHHHHHHHHh----ChhhccccCcEEEECCcccc
Confidence 97532110 012 2234445678899999999999999999 99999999999999999763
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-42 Score=316.30 Aligned_cols=253 Identities=24% Similarity=0.248 Sum_probs=216.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++....+ .++.++++|++|++++++++++
T Consensus 3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999988888887766543 4788999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~-------- 151 (265)
T PRK07062 83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA---AASIVCVNSLLALQ-------- 151 (265)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC---CcEEEEeccccccC--------
Confidence 58999999999987777888899999999999999999999999999998865 58999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|+++|+|+.+++++++.|++++||+||+|+||+++|++....
T Consensus 152 --------------~~~~~~-----------------~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~ 200 (265)
T PRK07062 152 --------------PEPHMV-----------------ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRR 200 (265)
T ss_pred --------------CCCCch-----------------HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhH
Confidence 666667 9999999999999999999999999999999999999986543
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHH--HhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKA--LDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~--~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...... .....++..+.+ ...++.+|++.|+|++..+.||+ ++.+.|+||+++.+|||+.
T Consensus 201 ~~~~~~---------~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~----s~~~~~~tG~~i~vdgg~~ 262 (265)
T PRK07062 201 YEARAD---------PGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLA----SPLSSYTTGSHIDVSGGFA 262 (265)
T ss_pred HHHhhc---------cCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHh----CchhcccccceEEEcCceE
Confidence 211100 001123333222 24578899999999999999999 9999999999999999964
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-42 Score=316.63 Aligned_cols=240 Identities=14% Similarity=0.134 Sum_probs=202.1
Q ss_pred CcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCch---hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Q 017757 32 RIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGK---KLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 32 ~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~---~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~ 106 (366)
.++++||+++||||+ +|||+++|++|+++|++|++++|+.. .++++.+++. +.++.++++|++|++++++++
T Consensus 2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~ 78 (257)
T PRK08594 2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE---GQESLLLPCDVTSDEEITACF 78 (257)
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC---CCceEEEecCCCCHHHHHHHH
Confidence 467899999999997 89999999999999999999987642 3333333332 457889999999999998887
Q ss_pred Hh----cCCCcEEEEcCCCCC----CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 107 DE----AGPVDVLVVNQGVFV----PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 107 ~~----~~~id~vi~nAG~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
++ ++++|++|||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++ .|+||++||..+..
T Consensus 79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~g~Iv~isS~~~~~ 153 (257)
T PRK08594 79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-----GGSIVTLTYLGGER 153 (257)
T ss_pred HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-----CceEEEEcccCCcc
Confidence 65 589999999999764 246678899999999999999999999999999964 47999999998876
Q ss_pred ccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
+.+.+. .|++||+|+.+|+++++.|++++|||||+|+||++
T Consensus 154 ----------------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v 194 (257)
T PRK08594 154 ----------------------VVQNYN-----------------VMGVAKASLEASVKYLANDLGKDGIRVNAISAGPI 194 (257)
T ss_pred ----------------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcc
Confidence 666677 99999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 259 ETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 259 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
+|++.+.... .++..+.+.+.++.+|+..|+|++..++||+ ++.++++||+++.+|||+
T Consensus 195 ~T~~~~~~~~-----------------~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~----s~~~~~~tG~~~~~dgg~ 253 (257)
T PRK08594 195 RTLSAKGVGG-----------------FNSILKEIEERAPLRRTTTQEEVGDTAAFLF----SDLSRGVTGENIHVDSGY 253 (257)
T ss_pred cCHhHhhhcc-----------------ccHHHHHHhhcCCccccCCHHHHHHHHHHHc----CcccccccceEEEECCch
Confidence 9996432210 0112233445678899999999999999999 999999999999999997
Q ss_pred H
Q 017757 339 I 339 (366)
Q Consensus 339 ~ 339 (366)
.
T Consensus 254 ~ 254 (257)
T PRK08594 254 H 254 (257)
T ss_pred h
Confidence 5
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=299.71 Aligned_cols=229 Identities=31% Similarity=0.407 Sum_probs=204.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--- 109 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--- 109 (366)
..+++++++|||||+|||+++|++|+++|++|++++|+.++++++.++++..++.++..+++|++++++++++.++.
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 35689999999999999999999999999999999999999999999999988999999999999999999988763
Q ss_pred -CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 -GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 -~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
..+|++|||||+...+++.+.++++.++++++|+.+...++++++|.|.+++ .|+||+|+|.+|+.
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~---~G~IiNI~S~ag~~---------- 148 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG---AGHIINIGSAAGLI---------- 148 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CceEEEEechhhcC----------
Confidence 5899999999999999999999999999999999999999999999999987 68999999999998
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh-h
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE-N 267 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~-~ 267 (366)
+.|... .|++||+++.+|+++|+.|+.++||+|.+|+||++.|++++.. .
T Consensus 149 ------------p~p~~a-----------------vY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~ 199 (265)
T COG0300 149 ------------PTPYMA-----------------VYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGS 199 (265)
T ss_pred ------------CCcchH-----------------HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccccc
Confidence 888888 9999999999999999999999999999999999999998621 1
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCc
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNS 308 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v 308 (366)
... ........++|+++++..+..+..++......+
T Consensus 200 ~~~-----~~~~~~~~~~~~~va~~~~~~l~~~k~~ii~~~ 235 (265)
T COG0300 200 DVY-----LLSPGELVLSPEDVAEAALKALEKGKREIIPGL 235 (265)
T ss_pred ccc-----cccchhhccCHHHHHHHHHHHHhcCCceEecCh
Confidence 111 111223478999999999999999865444333
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-42 Score=316.31 Aligned_cols=241 Identities=15% Similarity=0.121 Sum_probs=201.8
Q ss_pred CCCCCEEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGa--s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++||+++|||| ++|||+++|++|+++|++|++++|+. +.++..+++....+ ....+++|++|++++++++++
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHH
Confidence 478999999997 67999999999999999999998864 34444555544323 345789999999999988765
Q ss_pred -cCCCcEEEEcCCCCCCC----C-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 -AGPVDVLVVNQGVFVPG----E-LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~----~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++|||||+.... + +++.+.++|++++++|+.++++++|+++|+|+++ .++||++||.++..
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~----~g~Iv~iss~~~~~---- 152 (261)
T PRK08690 81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR----NSAIVALSYLGAVR---- 152 (261)
T ss_pred HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc----CcEEEEEccccccc----
Confidence 58999999999986542 2 3567889999999999999999999999999753 37999999998876
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.+++. .|++||+|+.+|+++++.|++++|||||+|+||+|+|++
T Consensus 153 ------------------~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~ 197 (261)
T PRK08690 153 ------------------AIPNYN-----------------VMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLA 197 (261)
T ss_pred ------------------CCCCcc-----------------cchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchh
Confidence 667777 999999999999999999999999999999999999997
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..... +.++..+.+....|.+|++.|+|++..+.||+ ++.+.++||+++.+|||+..
T Consensus 198 ~~~~~-----------------~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~----s~~~~~~tG~~i~vdgG~~~ 254 (261)
T PRK08690 198 ASGIA-----------------DFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLL----SDLSSGITGEITYVDGGYSI 254 (261)
T ss_pred hhcCC-----------------chHHHHHHHhhcCCCCCCCCHHHHHHHHHHHh----CcccCCcceeEEEEcCCccc
Confidence 54321 12333344556678999999999999999999 99999999999999999763
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=317.68 Aligned_cols=229 Identities=33% Similarity=0.424 Sum_probs=208.6
Q ss_pred cCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c-CCCcEEE
Q 017757 44 GGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A-GPVDVLV 116 (366)
Q Consensus 44 Gas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~-~~id~vi 116 (366)
|++ +|||+++|++|+++|++|++++|+.+++++..+++....+.+ .+++|+++++++++++++ + +++|++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 566 999999999999999999999999999888888887776766 499999999999988765 6 9999999
Q ss_pred EcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 117 VNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 117 ~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
||+|...+ .++.+.+.++|++.+++|+.+++.++|++.|+|++ .++||++||..+..
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~gsii~iss~~~~~-------------- 139 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-----GGSIINISSIAAQR-------------- 139 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----EEEEEEEEEGGGTS--------------
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CCCcccccchhhcc--------------
Confidence 99998775 77888999999999999999999999999998888 47999999998877
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.+++. .|+++|+|+++|++++|.||++ +|||||+|+||+++|++.+...
T Consensus 140 --------~~~~~~-----------------~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~---- 190 (241)
T PF13561_consen 140 --------PMPGYS-----------------AYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIP---- 190 (241)
T ss_dssp --------BSTTTH-----------------HHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHH----
T ss_pred --------cCccch-----------------hhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccc----
Confidence 777777 9999999999999999999999 9999999999999999765432
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..++..+.....+|.||+++|+|++..++||+ ||+++|+|||+|.+|||++
T Consensus 191 -------------~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~----s~~a~~itG~~i~vDGG~s 241 (241)
T PF13561_consen 191 -------------GNEEFLEELKKRIPLGRLGTPEEVANAVLFLA----SDAASYITGQVIPVDGGFS 241 (241)
T ss_dssp -------------THHHHHHHHHHHSTTSSHBEHHHHHHHHHHHH----SGGGTTGTSEEEEESTTGG
T ss_pred -------------cccchhhhhhhhhccCCCcCHHHHHHHHHHHh----CccccCccCCeEEECCCcC
Confidence 24778888899999999999999999999999 9999999999999999975
|
... |
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=312.75 Aligned_cols=244 Identities=23% Similarity=0.257 Sum_probs=210.1
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
..+++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++... +.++.++++|++|++++++++++
T Consensus 2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~ 80 (254)
T PRK06114 2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GRRAIQIAADVTSKADLRAAVART 80 (254)
T ss_pred CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHH
Confidence 456799999999999999999999999999999999999764 456666666543 55788999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~------- 150 (254)
T PRK06114 81 EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG---GGSIVNIASMSGII------- 150 (254)
T ss_pred HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC---CcEEEEECchhhcC-------
Confidence 58899999999998777788899999999999999999999999999998765 57999999998765
Q ss_pred ccCccccccccccCCCCCC--ccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 186 MKGINENKLCESSGKGHGG--YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.+. .. .|+++|+|+.+++++++.|+.++|||||+|+||+++|++.
T Consensus 151 ---------------~~~~~~~~-----------------~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~ 198 (254)
T PRK06114 151 ---------------VNRGLLQA-----------------HYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMN 198 (254)
T ss_pred ---------------CCCCCCcc-----------------hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccc
Confidence 3322 34 8999999999999999999999999999999999999975
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... . ..+..+.+....+.+|++.|+|+++.++||+ ++.++|+||+++.+|||++
T Consensus 199 ~~~-----~-------------~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~----s~~~~~~tG~~i~~dgg~~ 252 (254)
T PRK06114 199 TRP-----E-------------MVHQTKLFEEQTPMQRMAKVDEMVGPAVFLL----SDAASFCTGVDLLVDGGFV 252 (254)
T ss_pred ccc-----c-------------chHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCcCCceEEECcCEe
Confidence 421 0 0122334556778999999999999999999 9999999999999999975
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=293.85 Aligned_cols=190 Identities=33% Similarity=0.437 Sum_probs=176.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH----h
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD----E 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~----~ 108 (366)
..+++|+++|||||+|||.++|++|+++|++|++++|+.+++++++.++.+ .++..+..|++|.++++++++ +
T Consensus 2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHHHh
Confidence 356889999999999999999999999999999999999999999998864 578999999999999777665 4
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.++|+.|+++|+.|.++.+++++|.|.+++ .|+||++||++|..
T Consensus 79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~---~G~IiN~~SiAG~~---------- 145 (246)
T COG4221 79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK---SGHIINLGSIAGRY---------- 145 (246)
T ss_pred hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC---CceEEEeccccccc----------
Confidence 79999999999999889999999999999999999999999999999999988 68999999999998
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.|+.. .|+++|+|+.+|++.|+.|+..++|||.+|+||.+.|..+....
T Consensus 146 ------------~y~~~~-----------------vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~ 195 (246)
T COG4221 146 ------------PYPGGA-----------------VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVR 195 (246)
T ss_pred ------------cCCCCc-----------------cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceeccccc
Confidence 888888 99999999999999999999999999999999999887665543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=313.86 Aligned_cols=243 Identities=16% Similarity=0.142 Sum_probs=198.6
Q ss_pred CCCCCEEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGa--s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
++++|+++|||| ++|||+++|++|+++|++|++++|... .++..+++....+. ...+++|++|++++++++++
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHH
Confidence 478999999996 689999999999999999999876522 22233333332232 34689999999999988865
Q ss_pred -cCCCcEEEEcCCCCCCC----C-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 -AGPVDVLVVNQGVFVPG----E-LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~----~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++|||||..... + +++.+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-----~g~Ii~iss~~~~~---- 151 (260)
T PRK06997 81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-----DASLLTLSYLGAER---- 151 (260)
T ss_pred HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-----CceEEEEecccccc----
Confidence 58999999999986432 2 346789999999999999999999999999943 47999999988765
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.+... +|++||+|+.+|+++++.|++++|||||+|+||+|+|++
T Consensus 152 ------------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~ 196 (260)
T PRK06997 152 ------------------VVPNYN-----------------TMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLA 196 (260)
T ss_pred ------------------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccch
Confidence 666667 899999999999999999999999999999999999986
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFV 342 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~ 342 (366)
..... +.++..+.+...+|.+|.+.|+|++..+.||+ ++++.|+||+++.+|||++.++
T Consensus 197 ~~~~~-----------------~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~----s~~~~~itG~~i~vdgg~~~~~ 255 (260)
T PRK06997 197 ASGIK-----------------DFGKILDFVESNAPLRRNVTIEEVGNVAAFLL----SDLASGVTGEITHVDSGFNAVV 255 (260)
T ss_pred hcccc-----------------chhhHHHHHHhcCcccccCCHHHHHHHHHHHh----CccccCcceeEEEEcCChhhcc
Confidence 43210 11222334455678899999999999999999 9999999999999999988775
Q ss_pred H
Q 017757 343 A 343 (366)
Q Consensus 343 ~ 343 (366)
.
T Consensus 256 ~ 256 (260)
T PRK06997 256 G 256 (260)
T ss_pred c
Confidence 4
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=310.67 Aligned_cols=253 Identities=25% Similarity=0.339 Sum_probs=220.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
++++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++....+.++.++.+|++++++++++++++++
T Consensus 2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999999999998888888878765566788999999999999999999999
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||..+..
T Consensus 82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~iss~~~~~------------- 145 (259)
T PRK06125 82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG---SGVIVNVIGAAGEN------------- 145 (259)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CcEEEEecCccccC-------------
Confidence 99999999988777888999999999999999999999999999998765 57999999988765
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.+.+. .|+++|+|+.+++++++.|+.++||+||+|+||+++|++.........
T Consensus 146 ---------~~~~~~-----------------~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~ 199 (259)
T PRK06125 146 ---------PDADYI-----------------CGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRA 199 (259)
T ss_pred ---------CCCCch-----------------HhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhh
Confidence 556666 899999999999999999999999999999999999997654322110
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. .....++..+.+...++.+++..|+|++..+.||+ ++.+.++||+.+.+|||++
T Consensus 200 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~G~~i~vdgg~~ 254 (259)
T PRK06125 200 R---------AELGDESRWQELLAGLPLGRPATPEEVADLVAFLA----SPRSGYTSGTVVTVDGGIS 254 (259)
T ss_pred h---------cccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHc----CchhccccCceEEecCCee
Confidence 0 01122333445566778899999999999999999 9999999999999999965
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=312.93 Aligned_cols=245 Identities=18% Similarity=0.175 Sum_probs=211.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++||+++||||++|||+++|++|+++|++|++++| +.+.+++..+++....+.++.++++|++|++++++++++
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID 82 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999998865 566667777777655567899999999999999988876
Q ss_pred --cCCCcEEEEcCCCCC------CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 109 --AGPVDVLVVNQGVFV------PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 109 --~~~id~vi~nAG~~~------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
++++|++|||||... ..++.+.+++++++++++|+.+++.+++.++|.|++++ .++||++||..+..
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~-- 157 (260)
T PRK08416 83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG---GGSIISLSSTGNLV-- 157 (260)
T ss_pred HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC---CEEEEEEecccccc--
Confidence 578999999998753 24567788999999999999999999999999998765 57999999988766
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.++.. .|++||+|+++++++++.|+.++||+||+|+||+++|
T Consensus 158 --------------------~~~~~~-----------------~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T 200 (260)
T PRK08416 158 --------------------YIENYA-----------------GHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDT 200 (260)
T ss_pred --------------------CCCCcc-----------------cchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccC
Confidence 666677 9999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
++..... ..++..+.+....+.+|+..|+|++..++||+ ++.+.++||+.+.+|||++
T Consensus 201 ~~~~~~~-----------------~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~----~~~~~~~~G~~i~vdgg~~ 258 (260)
T PRK08416 201 DALKAFT-----------------NYEEVKAKTEELSPLNRMGQPEDLAGACLFLC----SEKASWLTGQTIVVDGGTT 258 (260)
T ss_pred hhhhhcc-----------------CCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----ChhhhcccCcEEEEcCCee
Confidence 9765321 11344445566678899999999999999999 9999999999999999975
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=311.78 Aligned_cols=239 Identities=13% Similarity=0.120 Sum_probs=200.1
Q ss_pred CCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 35 IKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 35 l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++||+++||||++ |||+++|++|+++|++|++++|+ +++++..+++.... ..+.++++|++|++++++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 81 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL-GSDIVLPCDVAEDASIDAMFAELGKV 81 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc-CCceEeecCCCCHHHHHHHHHHHHhh
Confidence 7899999999986 99999999999999999999997 44555556665442 3467889999999999988865
Q ss_pred cCCCcEEEEcCCCCCCCC-----ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 AGPVDVLVVNQGVFVPGE-----LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||+..... +.+.+.++|++++++|+.+++.+++.+.|++++ .++||++||..+..
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~g~Iv~iss~~~~~----- 151 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-----GSALLTLSYLGAER----- 151 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-----CcEEEEEecCCCCC-----
Confidence 589999999999764322 556789999999999999999999999987643 47999999988765
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.+.+. .|++||+|+.+|+++++.|++++|||||+|+||+++|++.
T Consensus 152 -----------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~ 197 (262)
T PRK07984 152 -----------------AIPNYN-----------------VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA 197 (262)
T ss_pred -----------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHH
Confidence 666677 9999999999999999999999999999999999999864
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.... ..++..+......+.+|++.|+|++..++||+ ++.+.++||+++.+|||+..
T Consensus 198 ~~~~-----------------~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~----s~~~~~itG~~i~vdgg~~~ 253 (262)
T PRK07984 198 SGIK-----------------DFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC----SDLSAGISGEVVHVDGGFSI 253 (262)
T ss_pred hcCC-----------------chHHHHHHHHHcCCCcCCCCHHHHHHHHHHHc----CcccccccCcEEEECCCccc
Confidence 3110 11233344455678899999999999999999 99999999999999999753
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=308.87 Aligned_cols=245 Identities=28% Similarity=0.322 Sum_probs=210.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++|+++||||++|||++++++|+++|++|++++|++++++++.+++... +.++.++.+|+++++++++++++
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-GGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5688999999999999999999999999999999999999888888777654 56788999999999999888765
Q ss_pred cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 ~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||... ..++.+.+.+++++++++|+.+++++++.++|.|++++ .++||++||.++...
T Consensus 81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~---~~~iv~~sS~~~~~~-------- 149 (254)
T PRK07478 81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG---GGSLIFTSTFVGHTA-------- 149 (254)
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CceEEEEechHhhcc--------
Confidence 579999999999864 36777889999999999999999999999999998865 579999999877520
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++++++++.|+.++||+||+|+||+++|++.+...
T Consensus 150 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 199 (254)
T PRK07478 150 -------------GFPGMA-----------------AYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMG 199 (254)
T ss_pred -------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccccc
Confidence 445556 89999999999999999999999999999999999999765321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. . ++....+....+.+++..|+|++..++||+ ++.+.++||+++.+|||++.
T Consensus 200 ~----------------~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----s~~~~~~~G~~~~~dgg~~~ 251 (254)
T PRK07478 200 D----------------T-PEALAFVAGLHALKRMAQPEEIAQAALFLA----SDAASFVTGTALLVDGGVSI 251 (254)
T ss_pred C----------------C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCCCCCeEEeCCchhc
Confidence 0 1 222233344457889999999999999999 99999999999999999764
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=309.09 Aligned_cols=245 Identities=22% Similarity=0.266 Sum_probs=215.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++..+.+|++|++++++++++
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-GIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 5688999999999999999999999999999999999988888887777654 45788899999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.++|++++++|+.+++.+++++.+.|++++ .++||++||..+..
T Consensus 84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~---------- 150 (254)
T PRK08085 84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ---AGKIINICSMQSEL---------- 150 (254)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEEccchhcc----------
Confidence 57899999999987777788899999999999999999999999999998765 58999999988765
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+++|+|+.+++++++.|++++||+||+|+||+++|++.....
T Consensus 151 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~- 200 (254)
T PRK08085 151 ------------GRDTIT-----------------PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALV- 200 (254)
T ss_pred ------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhc-
Confidence 566666 89999999999999999999999999999999999999865421
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
..++..+.+....+.++++.|+|++..+.||+ ++.++++||+++.+|||++++
T Consensus 201 ----------------~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~----~~~~~~i~G~~i~~dgg~~~~ 253 (254)
T PRK08085 201 ----------------EDEAFTAWLCKRTPAARWGDPQELIGAAVFLS----SKASDFVNGHLLFVDGGMLVA 253 (254)
T ss_pred ----------------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCcCCEEEECCCeeec
Confidence 11333344556788999999999999999999 999999999999999998764
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=313.35 Aligned_cols=241 Identities=15% Similarity=0.122 Sum_probs=199.0
Q ss_pred cCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 33 IPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..++||++|||||+ +|||+++|++|+++|++|++++|+.. ..+..+++.+..+ ....+++|++|++++++++++
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~ 83 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLE 83 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHH
Confidence 45789999999997 89999999999999999999988732 2333334433323 355789999999999988765
Q ss_pred --cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 --AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++|||||+..+ .++.+.+.++|++++++|+.++++++++++|+|++ .|+||++||..+..
T Consensus 84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-----~g~Iv~iss~~~~~---- 154 (272)
T PRK08159 84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-----GGSILTLTYYGAEK---- 154 (272)
T ss_pred HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-----CceEEEEecccccc----
Confidence 5899999999998643 46778899999999999999999999999999964 47999999987765
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.|++. .|++||+|+.+|+++++.|++++|||||+|+||+++|++
T Consensus 155 ------------------~~p~~~-----------------~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~ 199 (272)
T PRK08159 155 ------------------VMPHYN-----------------VMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLA 199 (272)
T ss_pred ------------------CCCcch-----------------hhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHH
Confidence 666777 999999999999999999999999999999999999986
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..... ..+...+.....+|.+|++.|+|++..++||+ ++.+.++||+++.+|||++.
T Consensus 200 ~~~~~-----------------~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~----s~~~~~itG~~i~vdgG~~~ 256 (272)
T PRK08159 200 ASGIG-----------------DFRYILKWNEYNAPLRRTVTIEEVGDSALYLL----SDLSRGVTGEVHHVDSGYHV 256 (272)
T ss_pred HhcCC-----------------cchHHHHHHHhCCcccccCCHHHHHHHHHHHh----CccccCccceEEEECCCcee
Confidence 43210 01111122223568899999999999999999 99999999999999999864
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=294.11 Aligned_cols=226 Identities=28% Similarity=0.375 Sum_probs=203.8
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
+.+..+++|++||||||++|||+++|.+|+++|+++++.|.|++..+++.++++.. | ++..+.||+++.+++.+..++
T Consensus 30 ~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g-~~~~y~cdis~~eei~~~a~~ 107 (300)
T KOG1201|consen 30 PKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G-EAKAYTCDISDREEIYRLAKK 107 (300)
T ss_pred ccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C-ceeEEEecCCCHHHHHHHHHH
Confidence 33778999999999999999999999999999999999999999999999999876 3 899999999999999888765
Q ss_pred ----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
+|.+|++|||||+.+..++.+.+.+++++++++|+.|+++.+|+++|.|.+++ .|+||.++|++|..
T Consensus 108 Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~---~GHIV~IaS~aG~~------ 178 (300)
T KOG1201|consen 108 VKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN---NGHIVTIASVAGLF------ 178 (300)
T ss_pred HHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC---CceEEEehhhhccc------
Confidence 69999999999999999999999999999999999999999999999999987 79999999999998
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc---cCCcEEEEEcCCCCCCC
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI---ADDIHVSLIFPPDTETP 261 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~Vn~V~PG~v~T~ 261 (366)
+.++.. .|++||+|+.+|.++|+.|+. .+||+..+|+|++++|.
T Consensus 179 ----------------g~~gl~-----------------~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg 225 (300)
T KOG1201|consen 179 ----------------GPAGLA-----------------DYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG 225 (300)
T ss_pred ----------------CCccch-----------------hhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc
Confidence 888888 999999999999999999986 56799999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeC
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPC 306 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~ 306 (366)
|++. ....+ ...+.++|+++|+.+++++..++....-
T Consensus 226 mf~~-~~~~~-------~l~P~L~p~~va~~Iv~ai~~n~~~~~~ 262 (300)
T KOG1201|consen 226 MFDG-ATPFP-------TLAPLLEPEYVAKRIVEAILTNQAGLLI 262 (300)
T ss_pred ccCC-CCCCc-------cccCCCCHHHHHHHHHHHHHcCCccccc
Confidence 9886 22221 2345679999999999999998755433
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=307.22 Aligned_cols=249 Identities=21% Similarity=0.209 Sum_probs=209.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id~ 114 (366)
+++||||++|||+++|++|+++|++|++++|+++.+++..+++... .++.++++|++|++++++++++ ++++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY--GEVYAVKADLSDKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6999999999999999999999999999999998888888887643 3678899999999999988865 589999
Q ss_pred EEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 115 LVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 115 vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
+|||||... +..+.+.+.++|.+.+++|+.+++++++.++|.|.+++. .|+||++||.++..
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--~g~iv~isS~~~~~-------------- 143 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM--KGVLVYLSSVSVKE-------------- 143 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC--CCEEEEEeCcccCC--------------
Confidence 999999754 345678889999999999999999999999998874322 58999999998866
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.+... .|++||+|+.+++++++.|++++||+||+|+||+++|++.+........
T Consensus 144 --------~~~~~~-----------------~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~ 198 (259)
T PRK08340 144 --------PMPPLV-----------------LADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAE 198 (259)
T ss_pred --------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhh
Confidence 666666 8999999999999999999999999999999999999987643211100
Q ss_pred chhhhhccCCCCCHHH-HHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADE-VAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFV 342 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~-~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~ 342 (366)
. ...++++ ..+.+...+|.+|++.|+|++..+.||+ |+.++++||+++.+|||+++++
T Consensus 199 ~--------~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~----s~~~~~itG~~i~vdgg~~~~~ 257 (259)
T PRK08340 199 E--------RGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLL----SENAEYMLGSTIVFDGAMTRGV 257 (259)
T ss_pred c--------cCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHc----CcccccccCceEeecCCcCCCC
Confidence 0 0112222 3345666789999999999999999999 9999999999999999987654
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=307.90 Aligned_cols=246 Identities=26% Similarity=0.297 Sum_probs=207.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|++|||||++|||+++|++|+++|++|++++|+ +++++..+++... +.++..+++|+++++++++++++ +
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-GGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-CCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999999999 7777777777543 55788999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||.... ..+.+.+.++|++++++|+.+++.++++++|+|+++ .++||++||..+..
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~---------- 146 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ----GGSIINTSSFSGQA---------- 146 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCEEEEeCchhhcC----------
Confidence 889999999998653 567788999999999999999999999999999865 37999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+....
T Consensus 147 ------------~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~ 197 (272)
T PRK08589 147 ------------ADLYRS-----------------GYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTG 197 (272)
T ss_pred ------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcc
Confidence 556666 899999999999999999999999999999999999998765321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... ..+.+.+......+.+|+..|+|++..++||+ ++.++++||+++.+|||+.
T Consensus 198 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----s~~~~~~~G~~i~vdgg~~ 253 (272)
T PRK08589 198 TSEDE-----------AGKTFRENQKWMTPLGRLGKPEEVAKLVVFLA----SDDSSFITGETIRIDGGVM 253 (272)
T ss_pred cchhh-----------HHHHHhhhhhccCCCCCCcCHHHHHHHHHHHc----CchhcCcCCCEEEECCCcc
Confidence 11000 00111122223467889999999999999999 9999999999999999975
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=308.32 Aligned_cols=251 Identities=25% Similarity=0.246 Sum_probs=215.0
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++++|+++++++++++++
T Consensus 4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (278)
T PRK08277 4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVKADVLDKESLEQARQQIL 82 (278)
T ss_pred ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999988888877777543 56788999999999999887765
Q ss_pred --cCCCcEEEEcCCCCCC---------------CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEe
Q 017757 109 --AGPVDVLVVNQGVFVP---------------GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALM 171 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~---------------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~v 171 (366)
++++|++|||||...+ .++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++
T Consensus 83 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~ii~i 159 (278)
T PRK08277 83 EDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK---GGNIINI 159 (278)
T ss_pred HHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC---CcEEEEE
Confidence 5899999999996543 2456788999999999999999999999999998765 5899999
Q ss_pred cCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEE
Q 017757 172 SSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVS 251 (366)
Q Consensus 172 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn 251 (366)
||..+.. +.++.. .|++||+|+++++++++.|++++||+||
T Consensus 160 sS~~~~~----------------------~~~~~~-----------------~Y~~sK~a~~~l~~~la~e~~~~girvn 200 (278)
T PRK08277 160 SSMNAFT----------------------PLTKVP-----------------AYSAAKAAISNFTQWLAVHFAKVGIRVN 200 (278)
T ss_pred ccchhcC----------------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence 9998876 666667 9999999999999999999999999999
Q ss_pred EEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCC-chhHHHHH
Q 017757 252 LIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSP-QRSVLMAF 330 (366)
Q Consensus 252 ~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~-~~~~itG~ 330 (366)
+|+||+++|++.+...... ....++..+.+....+.+|++.|+|++..++||+ ++ .+.++||+
T Consensus 201 ~v~Pg~v~t~~~~~~~~~~------------~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~----s~~~~~~~tG~ 264 (278)
T PRK08277 201 AIAPGFFLTEQNRALLFNE------------DGSLTERANKILAHTPMGRFGKPEELLGTLLWLA----DEKASSFVTGV 264 (278)
T ss_pred EEEeccCcCcchhhhhccc------------cccchhHHHHHhccCCccCCCCHHHHHHHHHHHc----CccccCCcCCC
Confidence 9999999999765432110 0112334455667789999999999999999999 99 89999999
Q ss_pred HHHHHHHHHH
Q 017757 331 VEVVAAGLIR 340 (366)
Q Consensus 331 ~i~~dgG~~~ 340 (366)
++.+|||++.
T Consensus 265 ~i~vdgG~~~ 274 (278)
T PRK08277 265 VLPVDGGFSA 274 (278)
T ss_pred EEEECCCeec
Confidence 9999999763
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=313.23 Aligned_cols=244 Identities=18% Similarity=0.140 Sum_probs=200.9
Q ss_pred CcCCCCCEEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh--------c-C---CeEEEEEecC-
Q 017757 32 RIPIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--------T-G---IEVATYSADV- 96 (366)
Q Consensus 32 ~~~l~gk~vLITGa--s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~--------~-~---~~v~~~~~Dl- 96 (366)
.++++||++||||| ++|||+++|++|+++|++|++ +|+.+++++...++... . + .....+.+|+
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 82 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV 82 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence 46699999999999 899999999999999999998 78888888877666531 1 1 1146788898
Q ss_pred -CC------------------HHHHHHHHHh----cCCCcEEEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHHHH
Q 017757 97 -RD------------------FDAVKTALDE----AGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHMIK 151 (366)
Q Consensus 97 -s~------------------~~~v~~~~~~----~~~id~vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 151 (366)
++ ++++++++++ ++++|++|||||... ..++.+.+.++|++++++|+.++++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~ 162 (303)
T PLN02730 83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ 162 (303)
T ss_pred cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 33 3477777654 689999999998643 3678889999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc-cccccccccccccccccchhhhhHH
Q 017757 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY-HVTSWRELSGQFCLLGTLLWIASKF 230 (366)
Q Consensus 152 ~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~asKa 230 (366)
+++|+|++ .|+||++||..+.. +.+++ . .|++||+
T Consensus 163 ~~~p~m~~-----~G~II~isS~a~~~----------------------~~p~~~~-----------------~Y~asKa 198 (303)
T PLN02730 163 HFGPIMNP-----GGASISLTYIASER----------------------IIPGYGG-----------------GMSSAKA 198 (303)
T ss_pred HHHHHHhc-----CCEEEEEechhhcC----------------------CCCCCch-----------------hhHHHHH
Confidence 99999976 37999999998876 55544 4 7999999
Q ss_pred HHHHHHHHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCch
Q 017757 231 GLRGLAEALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSE 309 (366)
Q Consensus 231 al~~l~~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~ 309 (366)
|+.+|+++|+.|+++ +|||||+|+||+|+|++.+... ..++..+......+.+|+..|+|++
T Consensus 199 Al~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~-----------------~~~~~~~~~~~~~pl~r~~~peevA 261 (303)
T PLN02730 199 ALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIG-----------------FIDDMIEYSYANAPLQKELTADEVG 261 (303)
T ss_pred HHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccc-----------------ccHHHHHHHHhcCCCCCCcCHHHHH
Confidence 999999999999986 7999999999999999865310 0122223334455778999999999
Q ss_pred hHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 310 GFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 310 ~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
..++||+ |+.+.++||+.+.+|||+...
T Consensus 262 ~~~~fLa----S~~a~~itG~~l~vdGG~~~~ 289 (303)
T PLN02730 262 NAAAFLA----SPLASAITGATIYVDNGLNAM 289 (303)
T ss_pred HHHHHHh----CccccCccCCEEEECCCcccc
Confidence 9999999 999999999999999997543
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=302.90 Aligned_cols=243 Identities=21% Similarity=0.304 Sum_probs=208.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||+++||||++|||+++|++|+++|++|++++++.. ++..+++... +.++..+++|++|.+++++++++
T Consensus 5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-GRRFLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998887542 4444555433 55788999999999999988876
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|.|++++. .|+||++||..+..
T Consensus 82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--~g~iv~isS~~~~~--------- 150 (253)
T PRK08993 82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN--GGKIINIASMLSFQ--------- 150 (253)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC--CeEEEEECchhhcc---------
Confidence 579999999999877777888999999999999999999999999999987532 47999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+... .|++||+|+++++++++.|+.++||+||+|+||+++|++.....
T Consensus 151 -------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~ 200 (253)
T PRK08993 151 -------------GGIRVP-----------------SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLR 200 (253)
T ss_pred -------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhc
Confidence 556666 89999999999999999999999999999999999999865421
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+.++..+.+...++.+|+..|+|++..+.||+ |+.+.++||+++.+|||+.
T Consensus 201 -----------------~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~----s~~~~~~~G~~~~~dgg~~ 251 (253)
T PRK08993 201 -----------------ADEQRSAEILDRIPAGRWGLPSDLMGPVVFLA----SSASDYINGYTIAVDGGWL 251 (253)
T ss_pred -----------------cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCccCcEEEECCCEe
Confidence 11233345566788999999999999999999 9999999999999999964
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=305.56 Aligned_cols=238 Identities=17% Similarity=0.166 Sum_probs=197.6
Q ss_pred cCCCCCEEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGa--s~gIG~aia~~L~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.++++|+++|||| ++|||+++|++|+++|++|++++|+. +.++++.+++ +.++.++++|++|++++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~i~~~~~~ 78 (256)
T PRK07889 3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL----PEPAPVLELDVTNEEHLASLADR 78 (256)
T ss_pred ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc----CCCCcEEeCCCCCHHHHHHHHHH
Confidence 4588999999999 89999999999999999999999864 2334433333 33677899999999999988765
Q ss_pred ----cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 109 ----AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
++++|++|||||+... .++.+.++++|++++++|+.+++++++.++|+|++ .++|++++|.. ..
T Consensus 79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-----~g~Iv~is~~~-~~-- 150 (256)
T PRK07889 79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-----GGSIVGLDFDA-TV-- 150 (256)
T ss_pred HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-----CceEEEEeecc-cc--
Confidence 5899999999998643 35677899999999999999999999999999974 47999998753 22
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.+.+. .|++||+|+.+|+++++.|++++|||||+|+||+++|
T Consensus 151 --------------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T 193 (256)
T PRK07889 151 --------------------AWPAYD-----------------WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRT 193 (256)
T ss_pred --------------------cCCccc-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccC
Confidence 455666 8999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCC-CeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG-SFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g-r~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
++.+... ..++..+.+....+.+ ++.+|+|++..++||+ ++.+.++||+.+.+|||++
T Consensus 194 ~~~~~~~-----------------~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~----s~~~~~~tG~~i~vdgg~~ 252 (256)
T PRK07889 194 LAAKAIP-----------------GFELLEEGWDERAPLGWDVKDPTPVARAVVALL----SDWFPATTGEIVHVDGGAH 252 (256)
T ss_pred hhhhccc-----------------CcHHHHHHHHhcCccccccCCHHHHHHHHHHHh----CcccccccceEEEEcCcee
Confidence 9754321 0123334445566777 6899999999999999 9999999999999999976
Q ss_pred H
Q 017757 340 R 340 (366)
Q Consensus 340 ~ 340 (366)
.
T Consensus 253 ~ 253 (256)
T PRK07889 253 A 253 (256)
T ss_pred c
Confidence 3
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=286.12 Aligned_cols=242 Identities=22% Similarity=0.205 Sum_probs=220.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
..++.|+++++||+..|||++++++|++.|++|+.+.|++..+..+.++. ...++.+..|+++.+.+++.+....+
T Consensus 2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~wea~~~~l~~v~p 77 (245)
T KOG1207|consen 2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----PSLIIPIVGDLSAWEALFKLLVPVFP 77 (245)
T ss_pred cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----CcceeeeEecccHHHHHHHhhcccCc
Confidence 45789999999999999999999999999999999999999988877765 45689999999999999999999999
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|.++||||+....+|.+++.++|+++|++|+.+.+.+.|...+-+..+.. +|.|+++||.++.+
T Consensus 78 idgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~--~GaIVNvSSqas~R------------- 142 (245)
T KOG1207|consen 78 IDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI--KGAIVNVSSQASIR------------- 142 (245)
T ss_pred hhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC--CceEEEecchhccc-------------
Confidence 999999999999999999999999999999999999999998887766554 68899999999988
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+..+.. .|+++|+|+.++++++|.|+++++||||+|+|-.|.|+|-+...
T Consensus 143 ---------~~~nHt-----------------vYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnW---- 192 (245)
T KOG1207|consen 143 ---------PLDNHT-----------------VYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNW---- 192 (245)
T ss_pred ---------ccCCce-----------------EEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccccccc----
Confidence 777777 99999999999999999999999999999999999999876532
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
-+| +-.+.+++.+|.+|+.+.+|+.++++||+ |+.+++.||..++++||++
T Consensus 193 ------------SDP-~K~k~mL~riPl~rFaEV~eVVnA~lfLL----Sd~ssmttGstlpveGGfs 243 (245)
T KOG1207|consen 193 ------------SDP-DKKKKMLDRIPLKRFAEVDEVVNAVLFLL----SDNSSMTTGSTLPVEGGFS 243 (245)
T ss_pred ------------CCc-hhccchhhhCchhhhhHHHHHHhhheeee----ecCcCcccCceeeecCCcc
Confidence 233 33467899999999999999999999999 9999999999999999975
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=302.06 Aligned_cols=239 Identities=23% Similarity=0.267 Sum_probs=203.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|++++++++++
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (261)
T PRK08265 2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDITDDAAIERAVATVVAR 77 (261)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999987777665554 45788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||......+ +.+.++|++.+++|+.++++++++++|+|+ ++ .++||++||.++..
T Consensus 78 ~g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~---~g~ii~isS~~~~~---------- 142 (261)
T PRK08265 78 FGRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG---GGAIVNFTSISAKF---------- 142 (261)
T ss_pred hCCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC---CcEEEEECchhhcc----------
Confidence 5899999999998654433 568999999999999999999999999997 33 58999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|+++|+|+.+++++++.|++++||+||+|+||+++|++.+....
T Consensus 143 ------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~ 193 (261)
T PRK08265 143 ------------AQTGRW-----------------LYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSG 193 (261)
T ss_pred ------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcc
Confidence 666666 899999999999999999999999999999999999998654321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHH-HhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKA-LDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~-~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. .++.. +.+ ....+.+|++.|+|++..+.||+ ++.+.++||+++.+|||++
T Consensus 194 ~---------------~~~~~-~~~~~~~~p~~r~~~p~dva~~~~~l~----s~~~~~~tG~~i~vdgg~~ 245 (261)
T PRK08265 194 G---------------DRAKA-DRVAAPFHLLGRVGDPEEVAQVVAFLC----SDAASFVTGADYAVDGGYS 245 (261)
T ss_pred c---------------chhHH-HHhhcccCCCCCccCHHHHHHHHHHHc----CccccCccCcEEEECCCee
Confidence 1 11111 222 22457899999999999999999 9999999999999999976
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=301.27 Aligned_cols=239 Identities=22% Similarity=0.231 Sum_probs=201.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-----
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----- 108 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----- 108 (366)
+++|+++||||++|||+++|++|+++|++|++++ |+.+..++..+++... +.++..+++|+++.+++++++++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLESLHGVEALYSSLDNEL 80 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc-CCceEEEecccCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999875 5666677776666543 55678899999999988877654
Q ss_pred ---cC--CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 ---AG--PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ---~~--~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++ ++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++ .++||++||.++..
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-----~g~iv~isS~~~~~----- 150 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-----NSRIINISSAATRI----- 150 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-----CCeEEEECCccccc-----
Confidence 23 7999999999876677888899999999999999999999999999976 47999999998876
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+.+++++++.|++++|||||+|+||+|+|++.
T Consensus 151 -----------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~ 196 (252)
T PRK12747 151 -----------------SLPDFI-----------------AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMN 196 (252)
T ss_pred -----------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchh
Confidence 666666 8999999999999999999999999999999999999986
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... .++..+......+.+|+..|+|++..+.||+ ++.+.++||+.+.+|||++
T Consensus 197 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~~~G~~i~vdgg~~ 251 (252)
T PRK12747 197 AELLS-----------------DPMMKQYATTISAFNRLGEVEDIADTAAFLA----SPDSRWVTGQLIDVSGGSC 251 (252)
T ss_pred hhccc-----------------CHHHHHHHHhcCcccCCCCHHHHHHHHHHHc----CccccCcCCcEEEecCCcc
Confidence 53211 1111111122236789999999999999999 9999999999999999964
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=301.06 Aligned_cols=242 Identities=23% Similarity=0.337 Sum_probs=210.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++++||++|||||++|||++++++|+++|++|++++|+ ++.++..+.+... +.++.++++|+++.+++++++++
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~ 88 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-GRKVTFVQVDLTKPESAEKVVKEALEE 88 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999998 5566666555443 56788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||...+.++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..
T Consensus 89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 155 (258)
T PRK06935 89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG---SGKIINIASMLSFQ---------- 155 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC---CeEEEEECCHHhcc----------
Confidence 57899999999988777788889999999999999999999999999998865 57999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+++|+|+++++++++.|+.++||+||+|+||+++|++.+....
T Consensus 156 ------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~ 206 (258)
T PRK06935 156 ------------GGKFVP-----------------AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA 206 (258)
T ss_pred ------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc
Confidence 666666 999999999999999999999999999999999999997543211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+...+.+...++.+|...|+|++..+.||+ ++.+.++||+++.+|||++
T Consensus 207 -----------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~~~G~~i~~dgg~~ 256 (258)
T PRK06935 207 -----------------DKNRNDEILKRIPAGRWGEPDDLMGAAVFLA----SRASDYVNGHILAVDGGWL 256 (258)
T ss_pred -----------------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----ChhhcCCCCCEEEECCCee
Confidence 1222334556678899999999999999999 9999999999999999964
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=308.51 Aligned_cols=241 Identities=26% Similarity=0.295 Sum_probs=204.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc---------hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHH
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG---------KKLEEAKQSIQLATGIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~---------~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~ 104 (366)
.++||+++||||++|||+++|++|+++|++|++++|+. +.+++..+++... +.++.++.+|++|++++++
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~v~~ 81 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-GGEAVANGDDIADWDGAAN 81 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-CCceEEEeCCCCCHHHHHH
Confidence 47899999999999999999999999999999999876 6667777777543 5578899999999999988
Q ss_pred HHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEEecCCccc
Q 017757 105 ALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN---GGPASIALMSSQAGQ 177 (366)
Q Consensus 105 ~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~---~~~g~iv~vsS~~~~ 177 (366)
++++ ++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|+++.. ...++||++||.++.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~ 161 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL 161 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence 8765 589999999999987778889999999999999999999999999999986532 124799999999887
Q ss_pred cccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 178 CWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
. +.++.. .|++||+|+.+|+++++.|++++|||||+|+||
T Consensus 162 ~----------------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg- 201 (286)
T PRK07791 162 Q----------------------GSVGQG-----------------NYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA- 201 (286)
T ss_pred c----------------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-
Confidence 6 667777 999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCC--CeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHH
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG--SFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVA 335 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g--r~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~d 335 (366)
++|++..... + ......+.+ +...|+|++..++||+ ++.+.++||+++.+|
T Consensus 202 ~~T~~~~~~~-------------------~----~~~~~~~~~~~~~~~pedva~~~~~L~----s~~~~~itG~~i~vd 254 (286)
T PRK07791 202 ARTRMTETVF-------------------A----EMMAKPEEGEFDAMAPENVSPLVVWLG----SAESRDVTGKVFEVE 254 (286)
T ss_pred CCCCcchhhH-------------------H----HHHhcCcccccCCCCHHHHHHHHHHHh----CchhcCCCCcEEEEc
Confidence 8898754211 0 111122333 4568999999999999 999999999999999
Q ss_pred HHHHHHH
Q 017757 336 AGLIRFV 342 (366)
Q Consensus 336 gG~~~~~ 342 (366)
||++..+
T Consensus 255 gG~~~~~ 261 (286)
T PRK07791 255 GGKISVA 261 (286)
T ss_pred CCceEEe
Confidence 9988643
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=293.76 Aligned_cols=195 Identities=37% Similarity=0.489 Sum_probs=179.3
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCe-EEEEEecCCCHHHHHHHHH--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIE-VATYSADVRDFDAVKTALD-- 107 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~-v~~~~~Dls~~~~v~~~~~-- 107 (366)
.+..+.||+|+|||||+|||+++|++|+++|++++++.|..++++...+++.+....+ +..+++|++|.++++++++
T Consensus 6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205|consen 6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999998877666 9999999999999999874
Q ss_pred --hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 108 --EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 108 --~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
+++++|+||||||+......++.+.+++...|++|++|+.+++|+++|+|++++ .|+||.+||++|..
T Consensus 86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~---~GhIVvisSiaG~~------- 155 (282)
T KOG1205|consen 86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN---DGHIVVISSIAGKM------- 155 (282)
T ss_pred HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC---CCeEEEEecccccc-------
Confidence 479999999999998877778889999999999999999999999999999987 69999999999998
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCC--cEEEEEcCCCCCCCCh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADD--IHVSLIFPPDTETPGL 263 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~Vn~V~PG~v~T~~~ 263 (366)
+.|... .|++||+|+.+|+++|++|+.+.+ |++ +|+||+|+|++.
T Consensus 156 ---------------~~P~~~-----------------~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~ 202 (282)
T KOG1205|consen 156 ---------------PLPFRS-----------------IYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFT 202 (282)
T ss_pred ---------------CCCccc-----------------ccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeeccc
Confidence 888888 999999999999999999999987 566 999999999977
Q ss_pred hhhhh
Q 017757 264 EEENK 268 (366)
Q Consensus 264 ~~~~~ 268 (366)
.....
T Consensus 203 ~~~~~ 207 (282)
T KOG1205|consen 203 GKELL 207 (282)
T ss_pred chhhc
Confidence 66433
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=296.39 Aligned_cols=246 Identities=24% Similarity=0.283 Sum_probs=215.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+.+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++... +.++.++.+|+++.+++++++++
T Consensus 2 ~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 2 SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-GGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999998888777777543 56789999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||...+ .++.+.+.+++++++++|+.+++.++++++|.|.+++ .++|+++||..+..
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~~sS~~~~~-------- 149 (253)
T PRK06172 81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG---GGAIVNTASVAGLG-------- 149 (253)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEECchhhcc--------
Confidence 4899999999998654 4477889999999999999999999999999998765 57999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++++++++.|+.++||+||+|+||.++|++.+..
T Consensus 150 --------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~ 198 (253)
T PRK06172 150 --------------AAPKMS-----------------IYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA 198 (253)
T ss_pred --------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence 666667 9999999999999999999999999999999999999987653
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.. ..++..+.+....+.+|+..|+|++..+.||+ ++.+.++||+.|.+|||+++
T Consensus 199 ~~----------------~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~----~~~~~~~~G~~i~~dgg~~~ 252 (253)
T PRK06172 199 YE----------------ADPRKAEFAAAMHPVGRIGKVEEVASAVLYLC----SDGASFTTGHALMVDGGATA 252 (253)
T ss_pred cc----------------cChHHHHHHhccCCCCCccCHHHHHHHHHHHh----CccccCcCCcEEEECCCccC
Confidence 21 12344555667778899999999999999999 99999999999999999753
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=302.13 Aligned_cols=240 Identities=23% Similarity=0.260 Sum_probs=203.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
++++|+++||||++|||+++|++|+++|++|++++|+. +..+++.+.+.. .+.++.++.+|++|++++++++++
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 124 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE-CGRKAVLLPGDLSDEKFARSLVHEAHK 124 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999988754 344444444433 356788999999999999888765
Q ss_pred -cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-----~g~iv~iSS~~~~~-------- 191 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-----GASIITTSSIQAYQ-------- 191 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-----CCEEEEECCchhcc--------
Confidence 589999999999753 356778899999999999999999999999999965 47999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. +|++||+|+.+++++++.|++++||+||+|+||+|+|++....
T Consensus 192 --------------~~~~~~-----------------~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~ 240 (294)
T PRK07985 192 --------------PSPHLL-----------------DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG 240 (294)
T ss_pred --------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccccc
Confidence 666666 8999999999999999999999999999999999999975321
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. .+++..+.+...++.+|++.|+|++..++||+ ++.+.++||+++.+|||+.
T Consensus 241 ~-----------------~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~----s~~~~~itG~~i~vdgG~~ 292 (294)
T PRK07985 241 G-----------------QTQDKIPQFGQQTPMKRAGQPAELAPVYVYLA----SQESSYVTAEVHGVCGGEH 292 (294)
T ss_pred C-----------------CCHHHHHHHhccCCCCCCCCHHHHHHHHHhhh----ChhcCCccccEEeeCCCee
Confidence 0 12333344566778899999999999999999 9999999999999999964
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-39 Score=294.36 Aligned_cols=250 Identities=22% Similarity=0.333 Sum_probs=212.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++++|+++++++++++++ +++
T Consensus 1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3789999999999999999999999999999999988888887777654 56788999999999999888765 478
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||.....++.+.+.+++++++++|+.+++.+++.+++.|++.+. .++|+++||..+..
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~------------- 144 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH--GGKIINATSQAGVV------------- 144 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CCEEEEECcccccc-------------
Confidence 999999999877777888899999999999999999999999999987542 47999999988776
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|+++|+++++++++++.|+.++||+||+|+||+++|+++.+......
T Consensus 145 ---------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~ 198 (256)
T PRK08643 145 ---------GNPELA-----------------VYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVG 198 (256)
T ss_pred ---------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhc
Confidence 656666 899999999999999999999999999999999999998765322110
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ...+.+...+.+...++.+|+..++|++..+.||+ ++.+.++||+++.+|||++
T Consensus 199 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~----~~~~~~~~G~~i~vdgg~~ 254 (256)
T PRK08643 199 EN--------AGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLA----GPDSDYITGQTIIVDGGMV 254 (256)
T ss_pred cc--------cCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHh----CccccCccCcEEEeCCCee
Confidence 00 00111222345566778999999999999999999 9999999999999999975
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=296.72 Aligned_cols=239 Identities=23% Similarity=0.300 Sum_probs=203.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||+++||||++|||+++|++|+++|++|++++|+.... .++.++++|++|++++++++++
T Consensus 2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~ 69 (258)
T PRK06398 2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISK 69 (258)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999986431 2578899999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++ .++||++||..+..
T Consensus 70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 136 (258)
T PRK06398 70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD---KGVIINIASVQSFA---------- 136 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CeEEEEeCcchhcc----------
Confidence 47899999999997777888899999999999999999999999999998765 58999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|++||+|+++++++++.|+.+. |+||+|+||+++|++......
T Consensus 137 ------------~~~~~~-----------------~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~ 186 (258)
T PRK06398 137 ------------VTRNAA-----------------AYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAE 186 (258)
T ss_pred ------------CCCCCc-----------------hhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhh
Confidence 666666 99999999999999999999876 999999999999998754321
Q ss_pred cCCcchhhhhccCCCCCHHHH---HHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEV---AKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~---a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
... ..+++.. .+.+....+.+|+..|+|++..++||+ ++.+.++||+++.+|||++..
T Consensus 187 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~----s~~~~~~~G~~i~~dgg~~~~ 247 (258)
T PRK06398 187 LEV-----------GKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLA----SDLASFITGECVTVDGGLRAL 247 (258)
T ss_pred ccc-----------cCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHc----CcccCCCCCcEEEECCccccC
Confidence 100 0112222 223345568899999999999999999 999999999999999997654
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=298.70 Aligned_cols=247 Identities=28% Similarity=0.309 Sum_probs=203.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+.+++|+++||||++|||+++|++|+++|++|++++|++++++++.+++ +.++.++++|++|++++++++++
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GDHVLVVEGDVTSYADNQRAVDQTVDA 77 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999999988776665543 44688899999999998888765
Q ss_pred cCCCcEEEEcCCCCC-CCCccCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 AGPVDVLVVNQGVFV-PGELEVQSLDE----VRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ~~~id~vi~nAG~~~-~~~~~~~~~~~----~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||+.. ..++.+.+.++ |++++++|+.+++.++++++|.|+++ .++||++||.++..
T Consensus 78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~----- 148 (263)
T PRK06200 78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS----GGSMIFTLSNSSFY----- 148 (263)
T ss_pred cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc----CCEEEEECChhhcC-----
Confidence 589999999999864 34555666665 89999999999999999999998764 47999999998876
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+.+++++++.|+++. ||||+|+||+++|++.
T Consensus 149 -----------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~ 193 (263)
T PRK06200 149 -----------------PGGGGP-----------------LYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLR 193 (263)
T ss_pred -----------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCc
Confidence 556666 89999999999999999999985 9999999999999985
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCc-hhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQ-RSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~-~~~itG~~i~~dgG~~ 339 (366)
.......... .....++..+.+...+|.+|++.|+|++..+.||+ ++. +.|+||+++.+|||++
T Consensus 194 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~----s~~~~~~itG~~i~vdgG~~ 258 (263)
T PRK06200 194 GPASLGQGET--------SISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLA----SRRNSRALTGVVINADGGLG 258 (263)
T ss_pred CccccCCCCc--------ccccccchhHHhhcCCCCCCCCCHHHHhhhhhhee----cccccCcccceEEEEcCcee
Confidence 4311000000 00011223345566789999999999999999999 988 9999999999999965
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=293.52 Aligned_cols=244 Identities=24% Similarity=0.291 Sum_probs=212.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++... +.++.++++|+++.+++++++++
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-GGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999988888887777643 55788899999999999887765
Q ss_pred -cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||... ..++.+.+.+++++++++|+.++++++++++|+|++++ .++|+++||..+..
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~-------- 150 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG---GGSIVNVASVNGVS-------- 150 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CcEEEEECchhhcC--------
Confidence 578999999999753 35667789999999999999999999999999998765 68999999988766
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+++++++++++.|+.++||+||+|+||+++|++....
T Consensus 151 --------------~~~~~~-----------------~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~ 199 (252)
T PRK07035 151 --------------PGDFQG-----------------IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL 199 (252)
T ss_pred --------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc
Confidence 666666 8999999999999999999999999999999999999986542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. .++..+......+.+|+.+|+|+++.++||+ ++.+.+++|+.+.+|||++
T Consensus 200 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~~~~dgg~~ 251 (252)
T PRK07035 200 FK-----------------NDAILKQALAHIPLRRHAEPSEMAGAVLYLA----SDASSYTTGECLNVDGGYL 251 (252)
T ss_pred cC-----------------CHHHHHHHHccCCCCCcCCHHHHHHHHHHHh----CccccCccCCEEEeCCCcC
Confidence 11 1233445566678899999999999999999 9999999999999999974
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=294.43 Aligned_cols=243 Identities=25% Similarity=0.280 Sum_probs=211.4
Q ss_pred cCCCCCEEEEEcCCC-hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHh--
Q 017757 33 IPIKDRHVFITGGSS-GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~-gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++|+++||||+| |||++++++|+++|++|++++|+.+++++..++++...+ .++..+++|+++++++++++++
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 457799999999985 999999999999999999999999888888877766434 4788999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||...+..+.+.+.++|++++++|+.+++.+++.++|+|+++.. .++|++++|..+..
T Consensus 93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~iv~~ss~~~~~-------- 162 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH--GGVIVNNASVLGWR-------- 162 (262)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CcEEEEeCchhhcC--------
Confidence 489999999999877778888999999999999999999999999999987542 47999999988765
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++....
T Consensus 163 --------------~~~~~~-----------------~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~ 211 (262)
T PRK07831 163 --------------AQHGQA-----------------HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV 211 (262)
T ss_pred --------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc
Confidence 555566 8999999999999999999999999999999999999976432
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
.+++..+.+....+.+|++.|+|++..++||+ ++.++++||+++.+|+|.
T Consensus 212 ------------------~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~----s~~~~~itG~~i~v~~~~ 261 (262)
T PRK07831 212 ------------------TSAELLDELAAREAFGRAAEPWEVANVIAFLA----SDYSSYLTGEVVSVSSQH 261 (262)
T ss_pred ------------------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCcCCceEEeCCCC
Confidence 12344445556678899999999999999999 999999999999999863
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=294.63 Aligned_cols=244 Identities=25% Similarity=0.311 Sum_probs=214.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++++||++|||||+++||+++|++|+++|++|++++|+++++++..+.+... +.++.++++|++|++++++++++
T Consensus 6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999999999999998888777777544 56788999999999999988875
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||...+.++.+.+.+++++++++|+.+++++++++.+.|++++ .++||++||..+..
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~---------- 151 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG---AGKIINIASVQSAL---------- 151 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC---CeEEEEEccchhcc----------
Confidence 57899999999998778888899999999999999999999999999998765 57999999987765
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|+++|+++.+++++++.|++++||+||+|+||+++|++.....
T Consensus 152 ------------~~~~~~-----------------~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~- 201 (255)
T PRK07523 152 ------------ARPGIA-----------------PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV- 201 (255)
T ss_pred ------------CCCCCc-----------------cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhc-
Confidence 566666 89999999999999999999999999999999999999765421
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..++..+.+....+.+++..++|++..+.||+ ++.+.++||+++.+|||.+.
T Consensus 202 ----------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~i~~~gg~~~ 253 (255)
T PRK07523 202 ----------------ADPEFSAWLEKRTPAGRWGKVEELVGACVFLA----SDASSFVNGHVLYVDGGITA 253 (255)
T ss_pred ----------------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCccCcEEEECCCeec
Confidence 11334445566778899999999999999999 99999999999999999754
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=291.69 Aligned_cols=242 Identities=24% Similarity=0.343 Sum_probs=206.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++++||+++||||++|||+++|++|+++|++|++++|+.. ++..+.++.. +.++.++++|+++.+++++++++
T Consensus 1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999999752 3444444432 55788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||...+.++.+.+.+++++++++|+.+++.++++++|+|++++. .++||++||..+..
T Consensus 78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~---------- 145 (248)
T TIGR01832 78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR--GGKIINIASMLSFQ---------- 145 (248)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CeEEEEEecHHhcc----------
Confidence 478999999999987777788899999999999999999999999999987532 47999999988766
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|++||+|+.+++++++.|+.++||+||+|+||+++|++.+...
T Consensus 146 ------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~- 195 (248)
T TIGR01832 146 ------------GGIRVP-----------------SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALR- 195 (248)
T ss_pred ------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccc-
Confidence 555566 89999999999999999999999999999999999999765321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..++..+.+...++.+++..|+|++..+.||+ ++.+.++||+++.+|||+.
T Consensus 196 ----------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~~~G~~i~~dgg~~ 246 (248)
T TIGR01832 196 ----------------ADEDRNAAILERIPAGRWGTPDDIGGPAVFLA----SSASDYVNGYTLAVDGGWL 246 (248)
T ss_pred ----------------cChHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCcCCcEEEeCCCEe
Confidence 11222334556678899999999999999999 9999999999999999964
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=301.08 Aligned_cols=244 Identities=17% Similarity=0.163 Sum_probs=193.5
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc----------hhHHHHHHHHHhhcCCeEEEEEecCCCH
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG----------KKLEEAKQSIQLATGIEVATYSADVRDF 99 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~----------~~~~~~~~~l~~~~~~~v~~~~~Dls~~ 99 (366)
|++.+++||+++||||++|||+++|++|+++|++|++++|+. ++++++.+++... +.++.++++|++|+
T Consensus 1 ~~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~ 79 (305)
T PRK08303 1 PMMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-GGRGIAVQVDHLVP 79 (305)
T ss_pred CCCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-CCceEEEEcCCCCH
Confidence 345678999999999999999999999999999999999984 3455566666543 55788999999999
Q ss_pred HHHHHHHHh----cCCCcEEEEcC-CCCC----CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEE
Q 017757 100 DAVKTALDE----AGPVDVLVVNQ-GVFV----PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIAL 170 (366)
Q Consensus 100 ~~v~~~~~~----~~~id~vi~nA-G~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~ 170 (366)
+++++++++ ++++|++|||| |... ..++.+.+.++|++++++|+.++++++++++|+|++++ .|+||+
T Consensus 80 ~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~---~g~IV~ 156 (305)
T PRK08303 80 EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP---GGLVVE 156 (305)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC---CcEEEE
Confidence 999988766 58999999999 7531 25667788999999999999999999999999998764 589999
Q ss_pred ecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEE
Q 017757 171 MSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHV 250 (366)
Q Consensus 171 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~V 250 (366)
+||..+... ..+.+... .|++||+|+.+|+++|+.|++++||||
T Consensus 157 isS~~~~~~-------------------~~~~~~~~-----------------~Y~asKaal~~lt~~La~el~~~gIrV 200 (305)
T PRK08303 157 ITDGTAEYN-------------------ATHYRLSV-----------------FYDLAKTSVNRLAFSLAHELAPHGATA 200 (305)
T ss_pred ECCcccccc-------------------CcCCCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence 999765320 00122344 899999999999999999999999999
Q ss_pred EEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhh-CCCeEeeCCchhHHHHHHhcCCCCch-hHHH
Q 017757 251 SLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIK-SGSFIVPCNSEGFLLSIATAGLSPQR-SVLM 328 (366)
Q Consensus 251 n~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~-~gr~~~~~~v~~~~~~L~~~~~s~~~-~~it 328 (366)
|+|+||+|+|++....... ++++..+. ....+ .++...|+|++..+.||+ ++.+ .++|
T Consensus 201 n~v~PG~v~T~~~~~~~~~---------------~~~~~~~~-~~~~p~~~~~~~peevA~~v~fL~----s~~~~~~it 260 (305)
T PRK08303 201 VALTPGWLRSEMMLDAFGV---------------TEENWRDA-LAKEPHFAISETPRYVGRAVAALA----ADPDVARWN 260 (305)
T ss_pred EEecCCccccHHHHHhhcc---------------Cccchhhh-hccccccccCCCHHHHHHHHHHHH----cCcchhhcC
Confidence 9999999999975432110 01111111 12344 467778999999999999 8874 6999
Q ss_pred HHHHH
Q 017757 329 AFVEV 333 (366)
Q Consensus 329 G~~i~ 333 (366)
|+.+.
T Consensus 261 G~~l~ 265 (305)
T PRK08303 261 GQSLS 265 (305)
T ss_pred CcEEE
Confidence 99865
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=297.03 Aligned_cols=245 Identities=24% Similarity=0.282 Sum_probs=204.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++|+++||||++|||++++++|+++|++|++++|+....+ ..++.++++|++|++++++++++
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEK 74 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999999876532 23678899999999999988765
Q ss_pred cCCCcEEEEcCCCCCCC---------CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccc
Q 017757 109 AGPVDVLVVNQGVFVPG---------ELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~---------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~ 179 (366)
++++|++|||||...+. .+.+.+.++|++++++|+.+++++++++.++|++++ .++||++||..+..
T Consensus 75 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~- 150 (266)
T PRK06171 75 FGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH---DGVIVNMSSEAGLE- 150 (266)
T ss_pred cCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC---CcEEEEEccccccC-
Confidence 48999999999975432 234679999999999999999999999999998765 57999999998876
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++
T Consensus 151 ---------------------~~~~~~-----------------~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 151 ---------------------GSEGQS-----------------CYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred ---------------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 666666 999999999999999999999999999999999997
Q ss_pred -CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHh--hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHH
Q 017757 260 -TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALD--GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAA 336 (366)
Q Consensus 260 -T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dg 336 (366)
|++........ . ......++++..+.+.. .+|.+|++.|+|++..+.||+ |+.++++||++|.+||
T Consensus 193 ~t~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~----s~~~~~itG~~i~vdg 261 (266)
T PRK06171 193 ATGLRTPEYEEA------L-AYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLL----SDRASYITGVTTNIAG 261 (266)
T ss_pred cCCCcChhhhhh------h-ccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeee----ccccccceeeEEEecC
Confidence 55533211100 0 00012345566666655 789999999999999999999 9999999999999999
Q ss_pred HHHH
Q 017757 337 GLIR 340 (366)
Q Consensus 337 G~~~ 340 (366)
|+++
T Consensus 262 g~~~ 265 (266)
T PRK06171 262 GKTR 265 (266)
T ss_pred cccC
Confidence 9864
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=298.33 Aligned_cols=240 Identities=23% Similarity=0.239 Sum_probs=204.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch--hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+++||++|||||++|||+++|++|+++|++|++++++.+ ..++..+.++.. +.++.++++|++|.+++++++++
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999887643 344555555443 66788999999999999888765
Q ss_pred -cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..++.
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~~~iv~~sS~~~~~-------- 197 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-----GASIINTGSIQSYQ-------- 197 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-----CCEEEEECCccccC--------
Confidence 579999999999864 456788899999999999999999999999999975 46999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|+.++||+||+|+||+++|++....
T Consensus 198 --------------~~~~~~-----------------~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~ 246 (300)
T PRK06128 198 --------------PSPTLL-----------------DYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG 246 (300)
T ss_pred --------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC
Confidence 666666 8999999999999999999999999999999999999975321
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. .. ++..+.+....+.+|++.|+|++..+.||+ ++.+.++||+.+.+|||+.
T Consensus 247 ~----------------~~-~~~~~~~~~~~p~~r~~~p~dva~~~~~l~----s~~~~~~~G~~~~v~gg~~ 298 (300)
T PRK06128 247 G----------------QP-PEKIPDFGSETPMKRPGQPVEMAPLYVLLA----SQESSYVTGEVFGVTGGLL 298 (300)
T ss_pred C----------------CC-HHHHHHHhcCCCCCCCcCHHHHHHHHHHHh----CccccCccCcEEeeCCCEe
Confidence 0 11 233344556678899999999999999999 9999999999999999953
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=290.90 Aligned_cols=236 Identities=21% Similarity=0.235 Sum_probs=202.5
Q ss_pred CCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecC-----------chhHHHHHHHHHhhcCCeEEEEEecCCCHH
Q 017757 34 PIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARS-----------GKKLEEAKQSIQLATGIEVATYSADVRDFD 100 (366)
Q Consensus 34 ~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~-----------~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~ 100 (366)
+++||+++||||+ +|||+++|++|+++|++|++++|+ .+..++..++++. .+.++.++++|+++.+
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDLTQND 81 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCCCCHH
Confidence 6899999999999 499999999999999999988643 2223344444443 3668899999999999
Q ss_pred HHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 101 AVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 101 ~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++++++++ ++++|++|||||.....++.+.+.+++++++++|+.+++.+.++++|.|++++ .++||++||..+
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~isS~~~ 158 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS---GGRIINMTSGQF 158 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC---CeEEEEEccccc
Confidence 99988865 57899999999987777888999999999999999999999999999998765 589999999887
Q ss_pred ccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC
Q 017757 177 QCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP 256 (366)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG 256 (366)
.. +.++.. .|++||+|+.+|+++++.|+.++||+||+|+||
T Consensus 159 ~~----------------------~~~~~~-----------------~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG 199 (256)
T PRK12859 159 QG----------------------PMVGEL-----------------AYAATKGAIDALTSSLAAEVAHLGITVNAINPG 199 (256)
T ss_pred CC----------------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEc
Confidence 65 666666 999999999999999999999999999999999
Q ss_pred CCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHH
Q 017757 257 DTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAA 336 (366)
Q Consensus 257 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dg 336 (366)
+++|++.. +++.+.+....+.+++..|+|++..+.||+ ++.+.++||+++.+||
T Consensus 200 ~i~t~~~~----------------------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~----s~~~~~~~G~~i~~dg 253 (256)
T PRK12859 200 PTDTGWMT----------------------EEIKQGLLPMFPFGRIGEPKDAARLIKFLA----SEEAEWITGQIIHSEG 253 (256)
T ss_pred cccCCCCC----------------------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCccCcEEEeCC
Confidence 99998643 122334455667889999999999999999 9999999999999999
Q ss_pred HH
Q 017757 337 GL 338 (366)
Q Consensus 337 G~ 338 (366)
|+
T Consensus 254 g~ 255 (256)
T PRK12859 254 GF 255 (256)
T ss_pred Cc
Confidence 95
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=291.93 Aligned_cols=243 Identities=26% Similarity=0.306 Sum_probs=202.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||+++||||++|||+++|++|+++|++|++++++.+.. .+++... ++.++++|++|++++++++++
T Consensus 2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~---~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (255)
T PRK06463 2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK---GVFTIKCDVGNRDQVKKSKEVVEK 75 (255)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC---CCeEEEecCCCHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999887765432 2223221 477899999999999988775
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....++.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||.++...
T Consensus 76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~---~g~iv~isS~~~~~~-------- 144 (255)
T PRK06463 76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK---NGAIVNIASNAGIGT-------- 144 (255)
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC---CcEEEEEcCHHhCCC--------
Confidence 57899999999987767778889999999999999999999999999998755 589999999887630
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++++++++.|+.++||+||+|+||+++|++.....
T Consensus 145 -------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~ 194 (255)
T PRK06463 145 -------------AAEGTT-----------------FYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGK 194 (255)
T ss_pred -------------CCCCcc-----------------HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhccc
Confidence 223445 89999999999999999999999999999999999999864321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ...++..+.+....+.+++..|+|++..++||+ ++.+.++||+.+.+|||..
T Consensus 195 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----s~~~~~~~G~~~~~dgg~~ 248 (255)
T PRK06463 195 SQ--------------EEAEKLRELFRNKTVLKTTGKPEDIANIVLFLA----SDDARYITGQVIVADGGRI 248 (255)
T ss_pred Cc--------------cchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHc----ChhhcCCCCCEEEECCCee
Confidence 10 011233344556678899999999999999999 9999999999999999954
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=290.55 Aligned_cols=245 Identities=26% Similarity=0.275 Sum_probs=210.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..++++|+++||||++|||+++|++|+++|++|++++|+. +..++..+++... +.++.++.+|++|.+++++++++
T Consensus 2 ~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 2 YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-GGEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999988854 4555666666543 56788999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||...+.++.+.+.+++++++++|+.+++.+++.++|+|.+++. .++||++||..+..
T Consensus 81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~--~g~iv~~sS~~~~~-------- 150 (261)
T PRK08936 81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI--KGNIINMSSVHEQI-------- 150 (261)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CcEEEEEccccccC--------
Confidence 578999999999887777888899999999999999999999999999987542 57999999988766
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.+... .|+++|+|+.+++++++.|+.++||+||+|+||+++|++....
T Consensus 151 --------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~ 199 (261)
T PRK08936 151 --------------PWPLFV-----------------HYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEK 199 (261)
T ss_pred --------------CCCCCc-----------------ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccc
Confidence 666667 9999999999999999999999999999999999999975431
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. .+++. ...+...++.+++..++|++..+.||+ ++.+.++||+++.+|||++
T Consensus 200 ~----------------~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~----s~~~~~~~G~~i~~d~g~~ 251 (261)
T PRK08936 200 F----------------ADPKQ-RADVESMIPMGYIGKPEEIAAVAAWLA----SSEASYVTGITLFADGGMT 251 (261)
T ss_pred c----------------CCHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHc----CcccCCccCcEEEECCCcc
Confidence 1 12232 344556778899999999999999999 9999999999999999965
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=289.51 Aligned_cols=242 Identities=21% Similarity=0.250 Sum_probs=210.2
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++... +.++.++.+|+++.+++++++++
T Consensus 5 ~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~ 83 (255)
T PRK06113 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDITSEQELSALADFAL 83 (255)
T ss_pred cccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999988888777777543 55788999999999999887765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||...+.++ +.+.+++++.+++|+.+++++++++.|+|.+.+ .++||++||..+..
T Consensus 84 ~~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~-------- 151 (255)
T PRK06113 84 SKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG---GGVILTITSMAAEN-------- 151 (255)
T ss_pred HHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC---CcEEEEEecccccC--------
Confidence 5889999999998665544 678999999999999999999999999998654 57999999988776
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+.+++++++.++.++||+||+|+||+++|++....
T Consensus 152 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~ 200 (255)
T PRK06113 152 --------------KNINMT-----------------SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV 200 (255)
T ss_pred --------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc
Confidence 666666 8999999999999999999999999999999999999986531
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
.++ +..+...+..+.++++.|+|++..+.||+ ++.+.++||+++.+|||.
T Consensus 201 -----------------~~~-~~~~~~~~~~~~~~~~~~~d~a~~~~~l~----~~~~~~~~G~~i~~~gg~ 250 (255)
T PRK06113 201 -----------------ITP-EIEQKMLQHTPIRRLGQPQDIANAALFLC----SPAASWVSGQILTVSGGG 250 (255)
T ss_pred -----------------cCH-HHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCccCCEEEECCCc
Confidence 122 23344566778889999999999999999 999999999999999994
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=290.51 Aligned_cols=246 Identities=24% Similarity=0.268 Sum_probs=215.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
+++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++.... +.++.++.+|+++++++++++++
T Consensus 4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (257)
T PRK09242 4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE 83 (257)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999988888877776542 46889999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||.....+..+.+.+++++++++|+.+++.++++++|+|++++ .++||++||.++..
T Consensus 84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~ii~~sS~~~~~-------- 152 (257)
T PRK09242 84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA---SSAIVNIGSVSGLT-------- 152 (257)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC---CceEEEECccccCC--------
Confidence 58999999999987667777889999999999999999999999999998765 57999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.+... .|+++|+++..++++++.|+.++||+||+|+||+++|++....
T Consensus 153 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~ 201 (257)
T PRK09242 153 --------------HVRSGA-----------------PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGP 201 (257)
T ss_pred --------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccc
Confidence 566666 8999999999999999999999999999999999999986542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. ..++..+.+....+.++...++|++..+.||+ ++.+.+++|+.+.+|||..+
T Consensus 202 ~-----------------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~i~~~gg~~~ 254 (257)
T PRK09242 202 L-----------------SDPDYYEQVIERTPMRRVGEPEEVAAAVAFLC----MPAASYITGQCIAVDGGFLR 254 (257)
T ss_pred c-----------------CChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CcccccccCCEEEECCCeEe
Confidence 1 12344455566778899999999999999999 88889999999999999653
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=290.79 Aligned_cols=248 Identities=27% Similarity=0.363 Sum_probs=209.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|+++||||++|||++++++|+++|++|++++|+.+ .++..+++... +.++.++.+|+++++++++++++ +
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-GHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999999999874 34444444432 55788999999999999888776 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|+|++++ .++||++||..+...
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~~---------- 147 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK---DGRIVMMSSVTGDMV---------- 147 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC---CcEEEEECcHHhccc----------
Confidence 7899999999988777888889999999999999999999999999997754 579999999776320
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|+++|+++++++++++.|+.++||+||+|+||+++|++.+.....
T Consensus 148 -----------~~~~~~-----------------~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~ 199 (263)
T PRK08226 148 -----------ADPGET-----------------AYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQ 199 (263)
T ss_pred -----------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhh
Confidence 344555 8999999999999999999999999999999999999987653211
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ....++++.+.+....|.+++..|+|++..+.||+ ++.+.++||+++.+|||.+
T Consensus 200 ~-----------~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~----~~~~~~~~g~~i~~dgg~~ 254 (263)
T PRK08226 200 S-----------NPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLA----SDESSYLTGTQNVIDGGST 254 (263)
T ss_pred c-----------cCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHc----CchhcCCcCceEeECCCcc
Confidence 1 01234566667777788999999999999999999 9999999999999999965
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=295.43 Aligned_cols=246 Identities=24% Similarity=0.317 Sum_probs=197.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+. .+.++..+++|++|.+++++++++
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----HGDAVVGVEGDVRSLDDHKEAVARCVAA 76 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----cCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999998766655432 245788999999999998877765
Q ss_pred cCCCcEEEEcCCCCCC-CCccCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 AGPVDVLVVNQGVFVP-GELEVQSL----DEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~-~~~~~~~~----~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||.... .++.+.+. ++|++++++|+.++++++++++|+|.++ .+++|+++|..+..
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~g~iv~~sS~~~~~----- 147 (262)
T TIGR03325 77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS----RGSVIFTISNAGFY----- 147 (262)
T ss_pred hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc----CCCEEEEeccceec-----
Confidence 5899999999997532 33333333 5799999999999999999999999764 36899999988766
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+++|+++++.|++++ ||||+|+||+++|++.
T Consensus 148 -----------------~~~~~~-----------------~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~ 192 (262)
T TIGR03325 148 -----------------PNGGGP-----------------LYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLR 192 (262)
T ss_pred -----------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCc
Confidence 555566 89999999999999999999987 9999999999999986
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCC-chhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSP-QRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~-~~~~itG~~i~~dgG~~ 339 (366)
........ ....+..+..+.+...+|.+|++.|+|+++.+.||+ ++ .+.++||+++.+|||+.
T Consensus 193 ~~~~~~~~---------~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~----s~~~~~~~tG~~i~vdgg~~ 256 (262)
T TIGR03325 193 GPKSLGMA---------DKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFA----TRGDTVPATGAVLNYDGGMG 256 (262)
T ss_pred cccccccc---------cccccccchhhhhhhcCCCCCCCChHHhhhheeeee----cCCCcccccceEEEecCCee
Confidence 43110000 000111112233344578999999999999999999 87 46799999999999975
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=289.66 Aligned_cols=239 Identities=24% Similarity=0.248 Sum_probs=205.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
++++++|+++||||++|||++++++|+++|++|++++|+.++ ...+.++.++++|+++++++++++++
T Consensus 1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (252)
T PRK07856 1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---------TVDGRPAEFHAADVRDPDQVAALVDAIVE 71 (252)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---------hhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999998754 11245788999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||......+.+.+.+++++++++|+.+++.+++++.|.|.++.. .++||++||..+..
T Consensus 72 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~ii~isS~~~~~--------- 140 (252)
T PRK07856 72 RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG--GGSIVNIGSVSGRR--------- 140 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CcEEEEEcccccCC---------
Confidence 489999999999877777788899999999999999999999999999987532 47999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+++++|+++++.|+.++ |+||+|+||+++|++.....
T Consensus 141 -------------~~~~~~-----------------~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~ 189 (252)
T PRK07856 141 -------------PSPGTA-----------------AYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHY 189 (252)
T ss_pred -------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhc
Confidence 666666 99999999999999999999988 99999999999999754321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFV 342 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~ 342 (366)
.+++ ..+.+...++.+|+..|+|++..++||+ ++.++++||+.+.+|||..+..
T Consensus 190 ----------------~~~~-~~~~~~~~~~~~~~~~p~~va~~~~~L~----~~~~~~i~G~~i~vdgg~~~~~ 243 (252)
T PRK07856 190 ----------------GDAE-GIAAVAATVPLGRLATPADIAWACLFLA----SDLASYVSGANLEVHGGGERPA 243 (252)
T ss_pred ----------------cCHH-HHHHHhhcCCCCCCcCHHHHHHHHHHHc----CcccCCccCCEEEECCCcchHH
Confidence 1122 2334556778899999999999999999 9999999999999999977553
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=291.46 Aligned_cols=251 Identities=23% Similarity=0.314 Sum_probs=216.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++++|++|++++++++++
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-GIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999998888877777643 55789999999999999998876
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||...+.++.+.+.+++++++++|+.+++.+++.++|+|++++ .++||++||..+..
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~--------- 151 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG---HGKIINICSMMSEL--------- 151 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC---CcEEEEEcCccccC---------
Confidence 47899999999998777888899999999999999999999999999998765 68999999988766
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+... .|+++|+|+.+++++++.|+.++||+||+|+||.++|++.....
T Consensus 152 -------------~~~~~~-----------------~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~ 201 (265)
T PRK07097 152 -------------GRETVS-----------------AYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLR 201 (265)
T ss_pred -------------CCCCCc-----------------cHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhh
Confidence 555666 89999999999999999999999999999999999999876532
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.... ....+...+.+....+.+++..|+|++..+.||+ ++.+.+++|+++.+|||+..
T Consensus 202 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~g~~~~~~gg~~~ 259 (265)
T PRK07097 202 ELQA-----------DGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLA----SDASNFVNGHILYVDGGILA 259 (265)
T ss_pred hccc-----------cccchhHHHHHHhcCCccCCcCHHHHHHHHHHHh----CcccCCCCCCEEEECCCcee
Confidence 2110 0112333344555667889999999999999999 99899999999999999763
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=288.01 Aligned_cols=241 Identities=27% Similarity=0.302 Sum_probs=207.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
||+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++++|++|++++++++++ ++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-PGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 689999999999999999999999999999999988887777766543 45788999999999999988876 4789
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||.....++.+.+.++|++++++|+.++++++++++|+|.+++. .++|+++||.++..
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~ii~isS~~~~~-------------- 143 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI--KGNIINMVATYAWD-------------- 143 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--CEEEEEEcChhhcc--------------
Confidence 99999999766667788999999999999999999999999999876432 48999999998865
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|++||+|+.+++++++.|+.+ +||+||+|+||+++|+.....
T Consensus 144 --------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~----- 193 (252)
T PRK07677 144 --------AGPGVI-----------------HSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADK----- 193 (252)
T ss_pred --------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccccccccc-----
Confidence 555666 8999999999999999999975 699999999999996532110
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
....++..+.+.+..+.+++..++|++..+.||+ ++.+.++||+++.+|||+.
T Consensus 194 -----------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~~~~~gg~~ 246 (252)
T PRK07677 194 -----------LWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLL----SDEAAYINGTCITMDGGQW 246 (252)
T ss_pred -----------ccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHc----CccccccCCCEEEECCCee
Confidence 0122455666777788899999999999999999 9999999999999999965
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=295.77 Aligned_cols=254 Identities=20% Similarity=0.194 Sum_probs=194.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---cCCCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---AGPVD 113 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---~~~id 113 (366)
+|+++|||| +|||+++|++|+ +|++|++++|+.+++++..+++... +.++.++++|++|++++++++++ ++++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-GFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 689999998 699999999996 8999999999988887777777543 56788999999999999988875 47899
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc-cccCccCcccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI-KNTNMKGINEN 192 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~-~~~~~~~~~~~ 192 (366)
++|||||... ..+++++++++|+.+++++++.+.|.|++ .+++|++||.++...+. .....+..
T Consensus 79 ~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-----~g~iv~isS~~~~~~~~~~~~~~~~~--- 143 (275)
T PRK06940 79 GLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAP-----GGAGVVIASQSGHRLPALTAEQERAL--- 143 (275)
T ss_pred EEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhh-----CCCEEEEEecccccCcccchhhhccc---
Confidence 9999999752 24679999999999999999999999975 35789999988764210 00000000
Q ss_pred ccccccCCCCCCccccccccccccc---c---ccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQF---C---LLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
...+..++.... + ..+...|++||+|+.+++++++.|++++|||||+|+||+++|++....
T Consensus 144 -------------~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~ 210 (275)
T PRK06940 144 -------------ATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDE 210 (275)
T ss_pred -------------cccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhh
Confidence 000000000000 0 012348999999999999999999999999999999999999986432
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
... ..++..+.+....+.+|++.|+|++..++||+ |+.++++||+++.+|||++.
T Consensus 211 ~~~---------------~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~----s~~~~~itG~~i~vdgg~~~ 265 (275)
T PRK06940 211 LNG---------------PRGDGYRNMFAKSPAGRPGTPDEIAALAEFLM----GPRGSFITGSDFLVDGGATA 265 (275)
T ss_pred hcC---------------CchHHHHHHhhhCCcccCCCHHHHHHHHHHHc----CcccCcccCceEEEcCCeEE
Confidence 110 11222344555678899999999999999999 99999999999999999753
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=291.15 Aligned_cols=250 Identities=22% Similarity=0.269 Sum_probs=204.2
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.+..+++||+++||||++|||++++++|+++|++|++++|+.+..++..+++.. +.++.++++|++|++++++++++
T Consensus 11 ~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (280)
T PLN02253 11 LPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG--EPNVCFFHCDVTVEDDVSRAVDFT 88 (280)
T ss_pred ccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCceEEEEeecCCHHHHHHHHHHH
Confidence 334578899999999999999999999999999999999988777766665532 45788999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||.... ..+.+.+.+++++++++|+.++++++++++|.|.+++ .++|++++|..+..
T Consensus 89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~ii~isS~~~~~----- 160 (280)
T PLN02253 89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK---KGSIVSLCSVASAI----- 160 (280)
T ss_pred HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC---CceEEEecChhhcc-----
Confidence 5889999999998643 4577889999999999999999999999999998754 57999999988865
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||.++|++.
T Consensus 161 -----------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~ 206 (280)
T PLN02253 161 -----------------GGLGPH-----------------AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALA 206 (280)
T ss_pred -----------------cCCCCc-----------------ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccc
Confidence 555555 8999999999999999999999999999999999999975
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHH----Hhhhh-CCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKA----LDGIK-SGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~----~~~i~-~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
....... ...++....+ ....+ .++...|+|++..+.||+ ++.+.|+||+++.+|||+
T Consensus 207 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~----s~~~~~i~G~~i~vdgG~ 269 (280)
T PLN02253 207 LAHLPED-------------ERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLA----SDEARYISGLNLMIDGGF 269 (280)
T ss_pred ccccccc-------------cchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhc----CcccccccCcEEEECCch
Confidence 4321100 0011111111 11122 256688999999999999 999999999999999998
Q ss_pred HH
Q 017757 339 IR 340 (366)
Q Consensus 339 ~~ 340 (366)
+.
T Consensus 270 ~~ 271 (280)
T PLN02253 270 TC 271 (280)
T ss_pred hh
Confidence 64
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=285.78 Aligned_cols=251 Identities=24% Similarity=0.290 Sum_probs=203.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
..++++|+++||||++|||++++++|+++|++|++++|+. ..++..+++... +.++.++++|+++.+++++++++
T Consensus 3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK12823 3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA-GGEALALTADLETYAGAQAAMAAAVE 80 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc-CCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999985 344555555433 55788999999999998887765
Q ss_pred -cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||... ..++.+.+.+++++.+++|+.+++++++.++|+|++++ .++||++||..+..
T Consensus 81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~-------- 149 (260)
T PRK12823 81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG---GGAIVNVSSIATRG-------- 149 (260)
T ss_pred HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCeEEEEcCccccC--------
Confidence 578999999999653 46778889999999999999999999999999998765 57999999976532
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+... +|++||+|+++|+++++.|++++||+||+|+||+++|++....
T Consensus 150 ----------------~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 196 (260)
T PRK12823 150 ----------------INRV-----------------PYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVP 196 (260)
T ss_pred ----------------CCCC-----------------ccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhH
Confidence 1223 7999999999999999999999999999999999999963221
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
....... .......++..+.+....+.++++.|+|++..+.||+ ++.+.++||+.+.+|||.
T Consensus 197 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 197 RNAAPQS------EQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLA----SDEASYITGTVLPVGGGD 258 (260)
T ss_pred Hhhcccc------ccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHc----CcccccccCcEEeecCCC
Confidence 1000000 0000112345556667778899999999999999999 999999999999999984
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=286.24 Aligned_cols=249 Identities=24% Similarity=0.295 Sum_probs=212.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|.+++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++ +.++.++++|++|++++++++++
T Consensus 2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07067 2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----GPAAIAVSLDVTRQDSIDRIVAAAVER 77 (257)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999988777665544 34688899999999999988876
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.+++++++++|+.+++.+++++++.|.++.. .++||++||..+..
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~iv~~sS~~~~~---------- 145 (257)
T PRK07067 78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR--GGKIINMASQAGRR---------- 145 (257)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC--CcEEEEeCCHHhCC----------
Confidence 478999999999887778888899999999999999999999999999977542 47999999987765
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|++||+++..++++++.|+.++||+||+|+||+++|++.+....
T Consensus 146 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~ 196 (257)
T PRK07067 146 ------------GEALVS-----------------HYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDA 196 (257)
T ss_pred ------------CCCCCc-----------------hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhh
Confidence 556666 999999999999999999999999999999999999997654311
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
... ......+.+..+.+.+.++.+++..++|++..+.||+ ++.+.++||+++.+|||.
T Consensus 197 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~~~g~~~~v~gg~ 254 (257)
T PRK07067 197 LFA--------RYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLA----SADADYIVAQTYNVDGGN 254 (257)
T ss_pred hhh--------hccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHh----CcccccccCcEEeecCCE
Confidence 100 0011234455556677889999999999999999999 999999999999999994
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=286.55 Aligned_cols=244 Identities=25% Similarity=0.316 Sum_probs=214.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||+++||||+++||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|+++++++.+++++
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999988888877777653 55788999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+++.|.+++ .++||++||..+..
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~--------- 152 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG---YGRIIAITSIAGQV--------- 152 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEEeechhcc---------
Confidence 57899999999988777888899999999999999999999999999998765 68999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. +|+++|+|+.+++++++.|+.++||+||+|+||+++|++.....
T Consensus 153 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~ 202 (256)
T PRK06124 153 -------------ARAGDA-----------------VYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMA 202 (256)
T ss_pred -------------CCCCcc-----------------HhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhc
Confidence 666666 99999999999999999999999999999999999999754321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+++..+.+....+.+++..++|++..+.||+ ++.++++||+.+.+|||+.
T Consensus 203 -----------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~----~~~~~~~~G~~i~~dgg~~ 253 (256)
T PRK06124 203 -----------------ADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLA----SPAASYVNGHVLAVDGGYS 253 (256)
T ss_pred -----------------cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CcccCCcCCCEEEECCCcc
Confidence 12334444556678899999999999999999 9999999999999999964
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=286.97 Aligned_cols=240 Identities=28% Similarity=0.318 Sum_probs=206.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+++++||+++||||++|||.++|++|+++|++|++++|+.+. .+..+++. +.++.++++|+++++++++++++
T Consensus 10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL---GGNAKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999998764 33333332 44677899999999999988765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....++.+.+.+++++++++|+.+++++++.+.|.|++++ .++||++||..+..
T Consensus 86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~--------- 153 (255)
T PRK06841 86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG---GGKIVNLASQAGVV--------- 153 (255)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC---CceEEEEcchhhcc---------
Confidence 47899999999988777777889999999999999999999999999998765 57999999988776
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+... .|+++|+|+++++++++.|++++||+||+|+||+++|++.....
T Consensus 154 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~ 203 (255)
T PRK06841 154 -------------ALERHV-----------------AYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAW 203 (255)
T ss_pred -------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccccc
Confidence 666666 99999999999999999999999999999999999999754321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. .+..+.+...++.+++..++|++..++||+ ++.+.++||+.+.+|||+.
T Consensus 204 -----------------~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~G~~i~~dgg~~ 253 (255)
T PRK06841 204 -----------------A-GEKGERAKKLIPAGRFAYPEEIAAAALFLA----SDAAAMITGENLVIDGGYT 253 (255)
T ss_pred -----------------c-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCccCCEEEECCCcc
Confidence 0 111234455678899999999999999999 9999999999999999974
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=286.39 Aligned_cols=245 Identities=21% Similarity=0.248 Sum_probs=202.8
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
+..+++||+++||||++|||++++++|+++|++|++++|+.+.. .+.++.++++|++|++++++++++
T Consensus 3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (260)
T PRK06523 3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LPEGVEFVAADLTTAEGCAAVARAVL 72 (260)
T ss_pred cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cCCceeEEecCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999986531 134678899999999999877655
Q ss_pred --cCCCcEEEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 --AGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 --~~~id~vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|++|||||... ...+.+.+.+++++++++|+.+++.++++++|+|++++ .++||++||..+..
T Consensus 73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~ii~isS~~~~~------ 143 (260)
T PRK06523 73 ERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG---SGVIIHVTSIQRRL------ 143 (260)
T ss_pred HHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC---CcEEEEEecccccC------
Confidence 588999999999753 35567789999999999999999999999999998865 57999999988765
Q ss_pred CccCccccccccccCCCCC-CccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 185 NMKGINENKLCESSGKGHG-GYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.+ ... .|++||+|+++++++++.|++++||+||+|+||.|+|++.
T Consensus 144 ----------------~~~~~~~-----------------~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~ 190 (260)
T PRK06523 144 ----------------PLPESTT-----------------AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAA 190 (260)
T ss_pred ----------------CCCCCcc-----------------hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccH
Confidence 433 455 8999999999999999999999999999999999999987
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHH---hhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKAL---DGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~---~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
......... ....++++..+.+. ..++.+|+..|+|++..+.||+ ++.++++||+++.+|||+.
T Consensus 191 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~----s~~~~~~~G~~~~vdgg~~ 257 (260)
T PRK06523 191 VALAERLAE--------AAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLA----SDRAASITGTEYVIDGGTV 257 (260)
T ss_pred HHHHHHHHh--------hcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHh----CcccccccCceEEecCCcc
Confidence 543211000 00123455444432 4468899999999999999999 9999999999999999964
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=299.11 Aligned_cols=243 Identities=16% Similarity=0.104 Sum_probs=186.9
Q ss_pred CcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHh---------hcCC-----eEEEEEec
Q 017757 32 RIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL---------ATGI-----EVATYSAD 95 (366)
Q Consensus 32 ~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~---------~~~~-----~v~~~~~D 95 (366)
..+++||+++||||+ +|||+++|++|+++|++|++.++.+ .++...+.... ..+. ++..+.+|
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 81 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS 81 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence 567899999999996 9999999999999999999987642 11111110000 0010 11112233
Q ss_pred CCCH------------------HHHHHHHH----hcCCCcEEEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHHHH
Q 017757 96 VRDF------------------DAVKTALD----EAGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHMIK 151 (366)
Q Consensus 96 ls~~------------------~~v~~~~~----~~~~id~vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 151 (366)
+++. ++++++++ +++++|++|||||... ..++.+.+.++|++++++|+.|+++++|
T Consensus 82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~ 161 (299)
T PRK06300 82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS 161 (299)
T ss_pred cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 3332 24555554 4789999999999754 4678899999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc-cccccccccccccccccchhhhhHH
Q 017757 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY-HVTSWRELSGQFCLLGTLLWIASKF 230 (366)
Q Consensus 152 ~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~asKa 230 (366)
+++|+|++ .|+|++++|..+.. +.+++ . .|++||+
T Consensus 162 a~~p~m~~-----~G~ii~iss~~~~~----------------------~~p~~~~-----------------~Y~asKa 197 (299)
T PRK06300 162 HFGPIMNP-----GGSTISLTYLASMR----------------------AVPGYGG-----------------GMSSAKA 197 (299)
T ss_pred HHHHHhhc-----CCeEEEEeehhhcC----------------------cCCCccH-----------------HHHHHHH
Confidence 99999975 46899999988765 55543 3 6999999
Q ss_pred HHHHHHHHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCch
Q 017757 231 GLRGLAEALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSE 309 (366)
Q Consensus 231 al~~l~~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~ 309 (366)
|+++|+++++.|+++ +|||||+|+||.++|++..... .+++..+.....++.+|...|+|++
T Consensus 198 Al~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~-----------------~~~~~~~~~~~~~p~~r~~~peevA 260 (299)
T PRK06300 198 ALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG-----------------FIERMVDYYQDWAPLPEPMEAEQVG 260 (299)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc-----------------ccHHHHHHHHhcCCCCCCcCHHHHH
Confidence 999999999999987 5999999999999999754310 1123333444567889999999999
Q ss_pred hHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 310 GFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 310 ~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..++||+ |+.+.++||+++.+|||+..
T Consensus 261 ~~v~~L~----s~~~~~itG~~i~vdGG~~~ 287 (299)
T PRK06300 261 AAAAFLV----SPLASAITGETLYVDHGANV 287 (299)
T ss_pred HHHHHHh----CccccCCCCCEEEECCCcce
Confidence 9999999 99999999999999999764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=315.07 Aligned_cols=238 Identities=27% Similarity=0.297 Sum_probs=206.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
...||++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++..+.+|++|++++++++++ +
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 457999999999999999999999999999999999988877766544 44677899999999999888765 5
Q ss_pred CCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||... ..++.+.+.++|++++++|+.+++++++.++|+|++ .++||++||.++..
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~---------- 406 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ-----GGVIVNLGSIASLL---------- 406 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc-----CCEEEEECchhhcC----------
Confidence 89999999999864 356778899999999999999999999999999932 57999999999877
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++......
T Consensus 407 ------------~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~ 457 (520)
T PRK06484 407 ------------ALPPRN-----------------AYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKA 457 (520)
T ss_pred ------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhcc
Confidence 667777 999999999999999999999999999999999999998654211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..++..+.+.+.++.+++..|+|++..+.||+ ++.+.++||+.+.+|||+.
T Consensus 458 ----------------~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~----s~~~~~~~G~~i~vdgg~~ 508 (520)
T PRK06484 458 ----------------SGRADFDSIRRRIPLGRLGDPEEVAEAIAFLA----SPAASYVNGATLTVDGGWT 508 (520)
T ss_pred ----------------ccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCccCcEEEECCCcc
Confidence 01122334556678899999999999999999 9999999999999999964
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=280.93 Aligned_cols=233 Identities=22% Similarity=0.326 Sum_probs=196.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++|+++||||++|||++++++|+++|++|++++++ .+..+++.+++ .+.++.+|++|.+++.+++++++++
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~~~~~i 76 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVRKSGAL 76 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999999888764 44444433322 2457889999999999999988899
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||........+.+++++++++++|+.+++.+++.+.+.|++ .++||++||..+...
T Consensus 77 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~g~iv~isS~~~~~~------------- 138 (237)
T PRK12742 77 DILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-----GGRIIIIGSVNGDRM------------- 138 (237)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-----CCeEEEEeccccccC-------------
Confidence 99999999877777778899999999999999999999999999965 479999999876320
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.++.. .|+++|+|+++++++++.++.++||+||+|+||+++|++....
T Consensus 139 --------~~~~~~-----------------~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~------ 187 (237)
T PRK12742 139 --------PVAGMA-----------------AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN------ 187 (237)
T ss_pred --------CCCCCc-----------------chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc------
Confidence 334455 8999999999999999999999999999999999999975321
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ...+......+.+|+..|+|++..+.||+ ++.++++||+++.+|||+.
T Consensus 188 ------------~--~~~~~~~~~~~~~~~~~p~~~a~~~~~l~----s~~~~~~~G~~~~~dgg~~ 236 (237)
T PRK12742 188 ------------G--PMKDMMHSFMAIKRHGRPEEVAGMVAWLA----GPEASFVTGAMHTIDGAFG 236 (237)
T ss_pred ------------c--HHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CcccCcccCCEEEeCCCcC
Confidence 0 11223344567889999999999999999 9999999999999999964
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=282.74 Aligned_cols=239 Identities=24% Similarity=0.295 Sum_probs=199.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
|.+++|+++||||++|||+++|++|+++|++|+++.+ +.++.++..+++ +.++.++++|++|++++++++++
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----GDRAIALQADVTDREQVQAMFATATE 76 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988765 444444433332 35788999999999999988876
Q ss_pred -cCC-CcEEEEcCCCCC------CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 109 -AGP-VDVLVVNQGVFV------PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 109 -~~~-id~vi~nAG~~~------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
+++ +|++|||||... ...+.+.+.+++++++++|+.+++.++++++|.|.+++ .++|+++||..+..
T Consensus 77 ~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~-- 151 (253)
T PRK08642 77 HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG---FGRIINIGTNLFQN-- 151 (253)
T ss_pred HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC---CeEEEEECCccccC--
Confidence 355 999999998642 24567889999999999999999999999999998755 58999999976543
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+..+.. .|++||+|+++++++++.+++++||+||+|+||+++|
T Consensus 152 --------------------~~~~~~-----------------~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t 194 (253)
T PRK08642 152 --------------------PVVPYH-----------------DYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRT 194 (253)
T ss_pred --------------------CCCCcc-----------------chHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCC
Confidence 444445 8999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+..... .+++..+.+...++.+++..|+|++..+.||+ ++.+.++||+++.+|||+.
T Consensus 195 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~G~~~~vdgg~~ 251 (253)
T PRK08642 195 TDASAA------------------TPDEVFDLIAATTPLRKVTTPQEFADAVLFFA----SPWARAVTGQNLVVDGGLV 251 (253)
T ss_pred chhhcc------------------CCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc----CchhcCccCCEEEeCCCee
Confidence 854321 12344455566778899999999999999999 9999999999999999964
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=281.15 Aligned_cols=221 Identities=24% Similarity=0.259 Sum_probs=184.3
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCC--HHHHHHHHH
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRD--FDAVKTALD 107 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~--~~~v~~~~~ 107 (366)
.+.+..|++++||||++|||+++|++|+++|++|++++|++++++++.++++... +.++..+.+|+++ .+.++++.+
T Consensus 47 ~~~~~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~ 126 (320)
T PLN02780 47 KNLKKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKE 126 (320)
T ss_pred ccccccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHH
Confidence 3344579999999999999999999999999999999999999999988887654 3578889999996 456677777
Q ss_pred hcCC--CcEEEEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 108 EAGP--VDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 108 ~~~~--id~vi~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
.++. +|++|||||...+ ..+.+.+.+++++++++|+.|++.+++.++|.|.+++ .|+||++||.++...
T Consensus 127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~---- 199 (320)
T PLN02780 127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIINIGSGAAIVI---- 199 (320)
T ss_pred HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC---CcEEEEEechhhccC----
Confidence 6654 5699999998753 4677889999999999999999999999999998866 689999999887530
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
++.|... .|++||+|+.+++++++.|+.++||+|++|+||+|+|++.
T Consensus 200 ----------------~~~p~~~-----------------~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~ 246 (320)
T PLN02780 200 ----------------PSDPLYA-----------------VYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMA 246 (320)
T ss_pred ----------------CCCccch-----------------HHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcc
Confidence 0235556 9999999999999999999999999999999999999986
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCe
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSF 302 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~ 302 (366)
..... ....++||++|+.+++.+..++.
T Consensus 247 ~~~~~-----------~~~~~~p~~~A~~~~~~~~~~~~ 274 (320)
T PLN02780 247 SIRRS-----------SFLVPSSDGYARAALRWVGYEPR 274 (320)
T ss_pred cccCC-----------CCCCCCHHHHHHHHHHHhCCCCc
Confidence 52110 01146899999999999976553
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=280.93 Aligned_cols=251 Identities=20% Similarity=0.243 Sum_probs=213.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+.+++|+++||||++|||+++|++|+++|++|++++|+++++++..+++... +.++.++.+|++|++++++++++
T Consensus 1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-GRRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999998888777777543 55788999999999999887765
Q ss_pred cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||...+ .++.+.+.+++++++++|+.+++.+++++.+.|+++ .++||++||..+..
T Consensus 80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~ii~~sS~~~~~--------- 146 (258)
T PRK07890 80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES----GGSIVMINSMVLRH--------- 146 (258)
T ss_pred cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC----CCEEEEEechhhcc---------
Confidence 5899999999998654 667788999999999999999999999999999765 36999999988765
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|+++|+++++++++++.|++++||+||+|+||++.|++.....
T Consensus 147 -------------~~~~~~-----------------~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~ 196 (258)
T PRK07890 147 -------------SQPKYG-----------------AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYF 196 (258)
T ss_pred -------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHh
Confidence 556666 89999999999999999999999999999999999999765432
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... ...++.++..+.+.+.++.+++..++|++..+.||+ ++.+.++||+++.+|||+.
T Consensus 197 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~----~~~~~~~~G~~i~~~gg~~ 256 (258)
T PRK07890 197 RHQAG--------KYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLA----SDLARAITGQTLDVNCGEY 256 (258)
T ss_pred hhccc--------ccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHc----CHhhhCccCcEEEeCCccc
Confidence 21100 012345566666667788899999999999999999 8888899999999999963
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=282.49 Aligned_cols=239 Identities=23% Similarity=0.291 Sum_probs=204.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
++|+++||||++|||++++++|+++|++|+++++ +.+.+++..+++... +.++.++.+|+++.+++++++++ ++
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999988865 555666666666543 66889999999999998887765 58
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||......+.+.+.+++++++++|+.+++++++++.++|.+++. .++||++||..+..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~g~ii~isS~~~~~------------ 145 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ--GGRIINITSVHEHT------------ 145 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CeEEEEEeeccccC------------
Confidence 8999999999887777788899999999999999999999999999976532 47999999988765
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.++.. .|+++|+|+.+++++++.++.++||+||+|+||+++|++....
T Consensus 146 ----------~~~~~~-----------------~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~---- 194 (256)
T PRK12743 146 ----------PLPGAS-----------------AYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD---- 194 (256)
T ss_pred ----------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc----
Confidence 666666 9999999999999999999999999999999999999975421
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+++........++.++...|+|++..+.||+ ++.+.+++|+.+.+|||++
T Consensus 195 ---------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~~dgg~~ 244 (256)
T PRK12743 195 ---------------DSDVKPDSRPGIPLGRPGDTHEIASLVAWLC----SEGASYTTGQSLIVDGGFM 244 (256)
T ss_pred ---------------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CccccCcCCcEEEECCCcc
Confidence 1222333445678889999999999999999 9999999999999999965
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=280.27 Aligned_cols=245 Identities=24% Similarity=0.333 Sum_probs=211.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
..++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++... +.++.++.+|+++++++++++++
T Consensus 4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE-GGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999998888877776544 45688999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CCcEEEEecCCcccccccc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNG-----GPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~-----~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++|||||......+.+.+.++++.++++|+.+++.++++++|.|.++..+ ..+++|++||..+..
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---- 158 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR---- 158 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC----
Confidence 4789999999998777777788899999999999999999999999999876421 147999999988765
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.+... .|+++|+++..++++++.++.++||+||+|+||+++|++
T Consensus 159 ------------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 159 ------------------VLPQIG-----------------LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203 (258)
T ss_pred ------------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence 555566 899999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
...... ++..+.+...++.++++.|+|++..+.||+ ++.++++||+++.+|||+
T Consensus 204 ~~~~~~------------------~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~----~~~~~~~~G~~i~~dgg~ 257 (258)
T PRK06949 204 NHHHWE------------------TEQGQKLVSMLPRKRVGKPEDLDGLLLLLA----ADESQFINGAIISADDGF 257 (258)
T ss_pred chhccC------------------hHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----ChhhcCCCCcEEEeCCCC
Confidence 653211 122234556678899999999999999999 999999999999999995
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=281.00 Aligned_cols=250 Identities=23% Similarity=0.264 Sum_probs=212.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
+|++|||||+++||++++++|+++|++|++++|+...+++..+++....+ .++.++.+|+++++++++++++ +++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 78999999999999999999999999999999998888877777665443 5789999999999999888765 589
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||......+.+.+.++|++++++|+.+++++++++++.|++++. .++||++||..+..
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~~iv~~ss~~~~~------------- 146 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI--QGRIIQINSKSGKV------------- 146 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC--CcEEEEecCccccc-------------
Confidence 999999999888888888999999999999999999999999999987541 36999999987765
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC-CCCChhhhhhcC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT-ETPGLEEENKRR 270 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v-~T~~~~~~~~~~ 270 (366)
+.+... .|++||+|+.+++++++.|++++||+||+|+||.+ .|++........
T Consensus 147 ---------~~~~~~-----------------~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~ 200 (259)
T PRK12384 147 ---------GSKHNS-----------------GYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQY 200 (259)
T ss_pred ---------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHH
Confidence 555556 89999999999999999999999999999999975 666543221110
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ....++++..+...+..+.+|+..++|++..+.||+ ++.+.++||+++.+|||..
T Consensus 201 ------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~----~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 201 ------AK--KLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYA----SPKASYCTGQSINVTGGQV 257 (259)
T ss_pred ------HH--hcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHc----CcccccccCceEEEcCCEE
Confidence 00 012356777777788889999999999999999999 8888999999999999965
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=280.95 Aligned_cols=248 Identities=23% Similarity=0.274 Sum_probs=207.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
++++++||++|||||++|||+++|++|+++|++|++++|+.++. +..+++... +.++.++.+|+++++++++++++
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL-QPRAEFVQVDLTDDAQCRDAVEQTV 78 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999998776 555666443 56789999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||......+++.+ +++++.+++|+.+++.+++.+.|.|++. .++|+++||..+..
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~iv~~ss~~~~~-------- 145 (258)
T PRK08628 79 AKFGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS----RGAIVNISSKTALT-------- 145 (258)
T ss_pred HhcCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc----CcEEEEECCHHhcc--------
Confidence 47899999999976555555544 9999999999999999999999998754 47999999988876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.+... .|++||+++++++++++.|+.++||+||+|+||.++|++.+.+
T Consensus 146 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~ 194 (258)
T PRK08628 146 --------------GQGGTS-----------------GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENW 194 (258)
T ss_pred --------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHH
Confidence 556666 9999999999999999999999999999999999999976543
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCC-CeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG-SFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g-r~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
.... ..+++..+.+...++.+ ++..++|++..+.|++ ++.+.+++|+.+.+|||++.+
T Consensus 195 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~g~~~~~~gg~~~~ 253 (258)
T PRK08628 195 IATF-------------DDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLL----SERSSHTTGQWLFVDGGYVHL 253 (258)
T ss_pred hhhc-------------cCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHh----ChhhccccCceEEecCCcccc
Confidence 2211 12344444445555654 7889999999999999 999999999999999998754
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=277.30 Aligned_cols=241 Identities=30% Similarity=0.395 Sum_probs=205.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++ +.++.++++|++|.+++.+++++ +
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999999877666555443 45788999999999998877665 4
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|+|++ .+++++++|..+..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~i~~~S~~~~~----------- 142 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-----PASIVLNGSINAHI----------- 142 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCEEEEEechHhcc-----------
Confidence 78999999999877777788899999999999999999999999999865 46899999987765
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.+... .|+++|+++++++++++.|++++||+|++|+||.++|++.+.....
T Consensus 143 -----------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~ 194 (249)
T PRK06500 143 -----------GMPNSS-----------------VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLP 194 (249)
T ss_pred -----------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccC
Confidence 555666 9999999999999999999999999999999999999976532110
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
....+++.+.+....+.+++..++|++..+.||+ ++.+.|++|+.+.+|||.+
T Consensus 195 -------------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~i~~~gg~~ 247 (249)
T PRK06500 195 -------------EATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLA----SDESAFIVGSEIIVDGGMS 247 (249)
T ss_pred -------------ccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCccCCeEEECCCcc
Confidence 0122445556666778889999999999999999 8888999999999999965
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=276.11 Aligned_cols=229 Identities=16% Similarity=0.148 Sum_probs=190.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
+|++|||||++|||+++|++|+++|++|++++|+++... +++... .+.++.+|++|++++++++++ ++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA---GAQCIQADFSTNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc---CCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence 689999999999999999999999999999999876433 233222 257889999999999988876 4789
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||......+.+.+.++|++++++|+.+++.+++.++|.|++++. ..++||++||..+..
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~-~~g~iv~~ss~~~~~-------------- 140 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH-AASDIIHITDYVVEK-------------- 140 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC-CCceEEEEcchhhcc--------------
Confidence 99999999876665667789999999999999999999999999987531 147999999988765
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.++.. .|++||+|+++|+++++.|+++ +||||+|+||++.|+...
T Consensus 141 --------~~~~~~-----------------~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~-------- 186 (236)
T PRK06483 141 --------GSDKHI-----------------AYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD-------- 186 (236)
T ss_pred --------CCCCCc-----------------cHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC--------
Confidence 666666 9999999999999999999988 599999999999775311
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++..+......+.+|...|+|++..+.||+ + +.++||+++.+|||++
T Consensus 187 -------------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~--~~~~~G~~i~vdgg~~ 234 (236)
T PRK06483 187 -------------DAAYRQKALAKSLLKIEPGEEEIIDLVDYLL----T--SCYVTGRSLPVDGGRH 234 (236)
T ss_pred -------------CHHHHHHHhccCccccCCCHHHHHHHHHHHh----c--CCCcCCcEEEeCcccc
Confidence 1222233445567889999999999999999 5 5799999999999964
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=278.76 Aligned_cols=241 Identities=22% Similarity=0.271 Sum_probs=201.6
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.+..+++||+++||||+++||+++|++|+++|++|++++|+.++.++..+++ +.++.++++|+++.+++++++++
T Consensus 3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (255)
T PRK05717 3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----GENAWFIAMDVADEAQVAAGVAEV 78 (255)
T ss_pred CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999877666554433 45788999999999998776655
Q ss_pred ---cCCCcEEEEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||...+ .++.+.+.+++++++++|+.+++.+++++.|+|+++ .++||++||..+..
T Consensus 79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~ii~~sS~~~~~----- 149 (255)
T PRK05717 79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH----NGAIVNLASTRARQ----- 149 (255)
T ss_pred HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc----CcEEEEEcchhhcC-----
Confidence 5789999999998643 467778999999999999999999999999999764 37999999998876
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.+... .|++||+|+++++++++.++.+ +|+||+|+||+++|++.
T Consensus 150 -----------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~ 194 (255)
T PRK05717 150 -----------------SEPDTE-----------------AYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDP 194 (255)
T ss_pred -----------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCcc
Confidence 556666 8999999999999999999987 49999999999999864
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.... .+..........+.+|++.|+|++..+.||+ ++.+.+++|+.+.+|||+++
T Consensus 195 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~~~~~gg~~~ 249 (255)
T PRK05717 195 SQRR------------------AEPLSEADHAQHPAGRVGTVEDVAAMVAWLL----SRQAGFVTGQEFVVDGGMTR 249 (255)
T ss_pred cccc------------------chHHHHHHhhcCCCCCCcCHHHHHHHHHHHc----CchhcCccCcEEEECCCceE
Confidence 3210 0111122223457789999999999999999 88889999999999999763
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=278.95 Aligned_cols=243 Identities=28% Similarity=0.363 Sum_probs=208.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++... +.++.++.+|+++++++++++++
T Consensus 4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (264)
T PRK07576 4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA-GPEGLGVSADVRDYAAVEAAFAQIAD 82 (264)
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999988877776666544 45678899999999999888776
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||......+.+.+.+++++++++|+.++++++++++|.|+++ .++|+++||..+..
T Consensus 83 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~----~g~iv~iss~~~~~--------- 149 (264)
T PRK07576 83 EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP----GASIIQISAPQAFV--------- 149 (264)
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCEEEEECChhhcc---------
Confidence 4789999999997766777888999999999999999999999999999764 37999999988765
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC-CCChhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE-TPGLEEE 266 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~-T~~~~~~ 266 (366)
+.++.. .|+++|+|+++|+++++.|+.++||+|++|+||+++ |+.....
T Consensus 150 -------------~~~~~~-----------------~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~ 199 (264)
T PRK07576 150 -------------PMPMQA-----------------HVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARL 199 (264)
T ss_pred -------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhc
Confidence 666666 999999999999999999999999999999999997 5533221
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+.++..+.+....+.++...++|++..+.||+ ++.+.+++|+.+.+|||+.
T Consensus 200 -----------------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~~~gg~~ 251 (264)
T PRK07576 200 -----------------APSPELQAAVAQSVPLKRNGTKQDIANAALFLA----SDMASYITGVVLPVDGGWS 251 (264)
T ss_pred -----------------ccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----ChhhcCccCCEEEECCCcc
Confidence 112333334445567889999999999999999 8889999999999999975
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=276.02 Aligned_cols=240 Identities=23% Similarity=0.315 Sum_probs=204.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
|++|+++||||++|||+++|++|+++|++|++. +++....++..+++... +.++..+.+|++|.+++++++++ +
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-GFDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999998875 44555555555555433 55788899999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.+++++++++|+.+++.++++++|.|++++ .++||++||..+..
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~----------- 145 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG---WGRIINISSVNGQK----------- 145 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CeEEEEEechhccC-----------
Confidence 8999999999987767788889999999999999999999999999998764 57999999988766
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|+++|+|+.+++++++.|+.++||++|+|+||+++|++....
T Consensus 146 -----------~~~~~~-----------------~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~--- 194 (246)
T PRK12938 146 -----------GQFGQT-----------------NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--- 194 (246)
T ss_pred -----------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---
Confidence 566666 8999999999999999999999999999999999999976532
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. ++..+.+....+.+++..+++++..+.||+ ++.+.+++|+++.+|||+++
T Consensus 195 ---------------~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~----~~~~~~~~g~~~~~~~g~~~ 245 (246)
T PRK12938 195 ---------------R-PDVLEKIVATIPVRRLGSPDEIGSIVAWLA----SEESGFSTGADFSLNGGLHM 245 (246)
T ss_pred ---------------C-hHHHHHHHhcCCccCCcCHHHHHHHHHHHc----CcccCCccCcEEEECCcccC
Confidence 1 223344555667888999999999999999 99999999999999999753
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=279.01 Aligned_cols=258 Identities=22% Similarity=0.258 Sum_probs=207.0
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
+..+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.. +.++..+++|++|.+++++++++
T Consensus 3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (296)
T PRK05872 3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEAV 80 (296)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999888887776642 45677788999999999888766
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+....++.+.++++|++++++|+.+++++++.++|+|.++ .++||++||.++..
T Consensus 81 ~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~----~g~iv~isS~~~~~-------- 148 (296)
T PRK05872 81 ERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER----RGYVLQVSSLAAFA-------- 148 (296)
T ss_pred HHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCEEEEEeCHhhcC--------
Confidence 4899999999999888888899999999999999999999999999999874 47999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+++++|+++++.|++++||+||+|+||+++|++.+..
T Consensus 149 --------------~~~~~~-----------------~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~ 197 (296)
T PRK05872 149 --------------AAPGMA-----------------AYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA 197 (296)
T ss_pred --------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc
Confidence 666777 9999999999999999999999999999999999999987653
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhh--hCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGI--KSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVAL 344 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i--~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~~~ 344 (366)
... .+..+.+...+ +.++...++|++..+.+++ ++...+++|... ...+.++...
T Consensus 198 ~~~-----------------~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~----~~~~~~i~~~~~--~~~~~~~~~~ 254 (296)
T PRK05872 198 DAD-----------------LPAFRELRARLPWPLRRTTSVEKCAAAFVDGI----ERRARRVYAPRW--VRLMQWLRPV 254 (296)
T ss_pred ccc-----------------chhHHHHHhhCCCcccCCCCHHHHHHHHHHHH----hcCCCEEEchHH--HHHHHHhchH
Confidence 211 11222222322 4567788888888888888 777777776643 1112233444
Q ss_pred HhhhhhHHHHHH
Q 017757 345 CFQWNWYGSIEK 356 (366)
Q Consensus 345 ~~~~~~~~~~~~ 356 (366)
++.+.+...+.+
T Consensus 255 l~~~~~~~~~~~ 266 (296)
T PRK05872 255 LVTRLGQREVRR 266 (296)
T ss_pred HHHHHHHHHHHh
Confidence 444444444433
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=275.13 Aligned_cols=245 Identities=29% Similarity=0.417 Sum_probs=215.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
+++|++|||||+++||++++++|+++|++|++++|+.+..+++.+++... +.++.++.+|++|.+++++++++ ++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-GGNAQAFACDITDRDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999999999999999988877777766543 55788999999999999888765 47
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||.....++.+.+.+++++++++|+.+++++++.+.+.|++++ .++|+++||..+..
T Consensus 80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~ii~iss~~~~~------------ 144 (250)
T TIGR03206 80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG---AGRIVNIASDAARV------------ 144 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CeEEEEECchhhcc------------
Confidence 899999999987777778889999999999999999999999999998765 57999999998876
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.+... .|+++|+|+.+++++++.++.+.||++++|+||.++|++.......
T Consensus 145 ----------~~~~~~-----------------~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~- 196 (250)
T TIGR03206 145 ----------GSSGEA-----------------VYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGG- 196 (250)
T ss_pred ----------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhc-
Confidence 556666 8999999999999999999999999999999999999987654321
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...+++....+...++.|++..++|++..+.||+ ++.+.+++|+++.+|||++
T Consensus 197 ------------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~g~~~~~~~g~~ 249 (250)
T TIGR03206 197 ------------AENPEKLREAFTRAIPLGRLGQPDDLPGAILFFS----SDDASFITGQVLSVSGGLT 249 (250)
T ss_pred ------------cCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHc----CcccCCCcCcEEEeCCCcc
Confidence 1345666777778889999999999999999999 9999999999999999965
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=277.61 Aligned_cols=229 Identities=31% Similarity=0.417 Sum_probs=194.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++.+|++|.+++++++++
T Consensus 2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-GAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999998888888654 66788999999999999988865
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....++.+.+.+++++++++|+.+++++++.++|+|++++ .++||++||..+..
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~---~g~iV~isS~~~~~--------- 148 (330)
T PRK06139 81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG---HGIFINMISLGGFA--------- 148 (330)
T ss_pred hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC---CCEEEEEcChhhcC---------
Confidence 48999999999998888889999999999999999999999999999999875 58999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccC-CcEEEEEcCCCCCCCChhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD-DIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~-gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.|... .|++||+|+.+|+++++.|+.++ ||+|++|+||+++|++....
T Consensus 149 -------------~~p~~~-----------------~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~ 198 (330)
T PRK06139 149 -------------AQPYAA-----------------AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHG 198 (330)
T ss_pred -------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccc
Confidence 667777 99999999999999999999875 99999999999999987542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeC
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPC 306 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~ 306 (366)
..... ..........+||++++.++..+..++.....
T Consensus 199 ~~~~~---~~~~~~~~~~~pe~vA~~il~~~~~~~~~~~~ 235 (330)
T PRK06139 199 ANYTG---RRLTPPPPVYDPRRVAKAVVRLADRPRATTTV 235 (330)
T ss_pred ccccc---ccccCCCCCCCHHHHHHHHHHHHhCCCCEEEc
Confidence 11100 01111223568999999999888776643333
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=279.31 Aligned_cols=241 Identities=28% Similarity=0.344 Sum_probs=205.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..++++|++|||||++|||++++++|+++|++|++++|+.. ..+...+.+.. .+.++.++.+|+++.+++++++++
T Consensus 41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-EGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999864 34444444433 356788999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 --AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||.... ..+.+.+.++|++++++|+.+++.+++++++.|++ .++||++||..+..
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-----~g~iV~isS~~~~~------- 187 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-----GSAIINTGSITGYE------- 187 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-----CCeEEEEecccccC-------
Confidence 4789999999998654 56778899999999999999999999999999965 46999999998876
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.+... .|++||+|+++++++++.++.++||+|++|+||+++|++...
T Consensus 188 ---------------~~~~~~-----------------~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~ 235 (290)
T PRK06701 188 ---------------GNETLI-----------------DYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS 235 (290)
T ss_pred ---------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence 555666 899999999999999999999999999999999999997543
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. . ++..+.+....+.+++..++|++..++||+ ++.+.+++|+++.+|||..
T Consensus 236 ~~-----------------~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ll----~~~~~~~~G~~i~idgg~~ 287 (290)
T PRK06701 236 DF-----------------D-EEKVSQFGSNTPMQRPGQPEELAPAYVFLA----SPDSSYITGQMLHVNGGVI 287 (290)
T ss_pred cc-----------------C-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHc----CcccCCccCcEEEeCCCcc
Confidence 11 1 222344556678889999999999999999 9999999999999999964
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=274.41 Aligned_cols=232 Identities=25% Similarity=0.291 Sum_probs=199.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+++++|+++||||++|||++++++|+++|++|++++|+..... ..++.++.+|++++ ++++.+.++++
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------~~~~~~~~~D~~~~--~~~~~~~~~~i 68 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----------SGNFHFLQLDLSDD--LEPLFDWVPSV 68 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----------CCcEEEEECChHHH--HHHHHHhhCCC
Confidence 3578999999999999999999999999999999999854311 34678899999998 77778888899
Q ss_pred cEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 113 DVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 113 d~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
|++|||||... ..++.+.+.+++++++++|+.++++++++++|.+++++ .++||++||..+..
T Consensus 69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~------------- 132 (235)
T PRK06550 69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK---SGIIINMCSIASFV------------- 132 (235)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEcChhhcc-------------
Confidence 99999999764 35667889999999999999999999999999998765 57999999998876
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|+++|+++++++++++.|+.++||+||+|+||+++|++.....
T Consensus 133 ---------~~~~~~-----------------~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~---- 182 (235)
T PRK06550 133 ---------AGGGGA-----------------AYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADF---- 182 (235)
T ss_pred ---------CCCCCc-----------------ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccccc----
Confidence 566666 89999999999999999999999999999999999999754211
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++...+.+....+.+++..++|++..+.||+ ++.+.+++|+++.+|||++
T Consensus 183 -------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~----s~~~~~~~g~~~~~~gg~~ 233 (235)
T PRK06550 183 -------------EPGGLADWVARETPIKRWAEPEEVAELTLFLA----SGKADYMQGTIVPIDGGWT 233 (235)
T ss_pred -------------CchHHHHHHhccCCcCCCCCHHHHHHHHHHHc----ChhhccCCCcEEEECCcee
Confidence 12333444556678899999999999999999 9999999999999999964
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=274.84 Aligned_cols=238 Identities=18% Similarity=0.219 Sum_probs=200.5
Q ss_pred cCCCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCc-----------hhHHHHHHHHHhhcCCeEEEEEecCCCH
Q 017757 33 IPIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSG-----------KKLEEAKQSIQLATGIEVATYSADVRDF 99 (366)
Q Consensus 33 ~~l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~-----------~~~~~~~~~l~~~~~~~v~~~~~Dls~~ 99 (366)
+++++|+++||||++ |||.++|++|+++|++|++++|++ .......+++.. .+.++.++++|++++
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~ 79 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YGVRCEHMEIDLSQP 79 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh-cCCeEEEEECCCCCH
Confidence 467899999999994 999999999999999999999972 222223334432 256799999999999
Q ss_pred HHHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 100 DAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 100 ~~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+++++++++ ++++|++|||||.....++.+.+++++++.+++|+.+++++++++.+.|.++. .++||++||..
T Consensus 80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~ss~~ 156 (256)
T PRK12748 80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA---GGRIINLTSGQ 156 (256)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC---CeEEEEECCcc
Confidence 999887765 47899999999987777788889999999999999999999999999997654 57999999987
Q ss_pred cccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcC
Q 017757 176 GQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255 (366)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~P 255 (366)
+.. +.++.. .|++||+|+++++++++.|+.+.||+|++|+|
T Consensus 157 ~~~----------------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~P 197 (256)
T PRK12748 157 SLG----------------------PMPDEL-----------------AYAATKGAIEAFTKSLAPELAEKGITVNAVNP 197 (256)
T ss_pred ccC----------------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEe
Confidence 765 555556 89999999999999999999999999999999
Q ss_pred CCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHH
Q 017757 256 PDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVA 335 (366)
Q Consensus 256 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~d 335 (366)
|.++|++... +..+.+....+.++...|+|++..+.||+ ++.+.+++|+++.+|
T Consensus 198 g~~~t~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~a~~~~~l~----~~~~~~~~g~~~~~d 251 (256)
T PRK12748 198 GPTDTGWITE----------------------ELKHHLVPKFPQGRVGEPVDAARLIAFLV----SEEAKWITGQVIHSE 251 (256)
T ss_pred CcccCCCCCh----------------------hHHHhhhccCCCCCCcCHHHHHHHHHHHh----CcccccccCCEEEec
Confidence 9999986432 22223334456678889999999999999 999999999999999
Q ss_pred HHHH
Q 017757 336 AGLI 339 (366)
Q Consensus 336 gG~~ 339 (366)
||++
T Consensus 252 ~g~~ 255 (256)
T PRK12748 252 GGFS 255 (256)
T ss_pred CCcc
Confidence 9975
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=274.82 Aligned_cols=245 Identities=25% Similarity=0.303 Sum_probs=211.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
++++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|+++++++++++++
T Consensus 5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-GRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999988888777777543 55788999999999999887765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||......+.+.+.+++++++++|+.+++.+++++.|+|.+... .++||++||.++..
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~iv~~sS~~~~~--------- 152 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG--GGSVINISSTMGRL--------- 152 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC--CeEEEEEccccccC---------
Confidence 578999999999877777888899999999999999999999999999987432 57999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+++++++++++.|+.+ +|+||+|+||++.|++.....
T Consensus 153 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~ 201 (263)
T PRK07814 153 -------------AGRGFA-----------------AYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVA 201 (263)
T ss_pred -------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhcc
Confidence 666666 8999999999999999999987 699999999999999765321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+.++..+.+....+.++...++|++..+.|++ ++.+.+++|+.+.+|||..+
T Consensus 202 -----------------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~~~~~~~~~~ 253 (263)
T PRK07814 202 -----------------ANDELRAPMEKATPLRRLGDPEDIAAAAVYLA----SPAGSYLTGKTLEVDGGLTF 253 (263)
T ss_pred -----------------CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCcCCCEEEECCCccC
Confidence 11334445555667788899999999999999 99999999999999999764
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-36 Score=271.47 Aligned_cols=232 Identities=27% Similarity=0.352 Sum_probs=198.5
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCcE
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVDV 114 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id~ 114 (366)
++||||++|||+++|++|+++|++|++++|. .+.+++..++++.. +.++.++++|++|.+++++++++ ++++|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-GGNARLLQFDVADRVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5899999999999999999999999998875 45566666666543 56799999999999999888765 578999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL-PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~-~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
+|||||......+.+.+.++++.++++|+.++++++++++ |.+++++ .++||++||..+..
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~iv~vsS~~~~~--------------- 141 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ---GGRIITLASVSGVM--------------- 141 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC---CeEEEEEcchhhcc---------------
Confidence 9999998877777788999999999999999999999885 5555443 57999999988876
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
+.++.. .|+++|+|+.+++++++.|+.++||+||+|+||+++|++..+..
T Consensus 142 -------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~------ 191 (239)
T TIGR01831 142 -------GNRGQV-----------------NYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVE------ 191 (239)
T ss_pred -------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhh------
Confidence 666666 89999999999999999999999999999999999999865421
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
+. .+.....++.+|++.|+|++..++||+ ++.+.++||+++.+|||+
T Consensus 192 -------------~~-~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~~~~~gg~ 238 (239)
T TIGR01831 192 -------------HD-LDEALKTVPMNRMGQPAEVASLAGFLM----SDGASYVTRQVISVNGGM 238 (239)
T ss_pred -------------HH-HHHHHhcCCCCCCCCHHHHHHHHHHHc----CchhcCccCCEEEecCCc
Confidence 11 223445678899999999999999999 999999999999999995
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=271.56 Aligned_cols=248 Identities=27% Similarity=0.365 Sum_probs=211.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id 113 (366)
|+++||||+++||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|++++.+++++ ++++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 68999999999999999999999999999999988877777776643 56788999999999999888765 57899
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
++|||||.....++.+.+.+++++++++|+.+++++++.+++.|++++. .++|+++||..+..
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~--------------- 142 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH--GGKIINAASIAGHE--------------- 142 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC--CeEEEEecchhhcC---------------
Confidence 9999999877778888999999999999999999999999999988653 37999999988876
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
+.+... .|++||+++++++++++.|+.+.||+|++|+||+++|++.+.........
T Consensus 143 -------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~ 198 (254)
T TIGR02415 143 -------GNPILS-----------------AYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEI 198 (254)
T ss_pred -------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhc
Confidence 666677 99999999999999999999999999999999999999865533211110
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...+..+..+.+.+.++.+++.+|+|++..+.||+ ++.+.+++|+.+.+|||+.
T Consensus 199 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~----~~~~~~~~g~~~~~d~g~~ 252 (254)
T TIGR02415 199 --------AGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLA----SEDSDYITGQSILVDGGMV 252 (254)
T ss_pred --------ccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhc----ccccCCccCcEEEecCCcc
Confidence 01122334445566788999999999999999999 9999999999999999954
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=271.62 Aligned_cols=243 Identities=25% Similarity=0.331 Sum_probs=211.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|+++||||+++||++++++|+++|++|++++|+.+++++..++++.. +.++.++++|++|++++++++++
T Consensus 3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA-GGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999988888877777543 45789999999999999988876
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||+|......+.+.+.+++++++++|+.+++.+++.+.|.|.+++ .+++|++||..+..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 148 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG---RGRIVNLASDTALW---------- 148 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CeEEEEECchhhcc----------
Confidence 47899999999988777788889999999999999999999999999998865 57999999988766
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+++|++++++++.++.++.+.+|+|++|+||.++|++.....
T Consensus 149 ------------~~~~~~-----------------~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~- 198 (250)
T PRK12939 149 ------------GAPKLG-----------------AYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVP- 198 (250)
T ss_pred ------------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccC-
Confidence 556666 89999999999999999999999999999999999999865421
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+.+..+......+.+++..++|++..+.+++ ++.+++++|+.|.+|||.++
T Consensus 199 -----------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~i~~~gg~~~ 249 (250)
T PRK12939 199 -----------------ADERHAYYLKGRALERLQVPDDVAGAVLFLL----SDAARFVTGQLLPVNGGFVM 249 (250)
T ss_pred -----------------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CccccCccCcEEEECCCccc
Confidence 1233344455667788999999999999999 88888999999999999763
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=281.41 Aligned_cols=266 Identities=19% Similarity=0.196 Sum_probs=213.6
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~ 106 (366)
++.+..+++||+++||||++|||+++|++|+++|++|++++++. +..++..+++... +.++.++++|++|.+++++++
T Consensus 3 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv~d~~~~~~~~ 81 (306)
T PRK07792 3 RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-GAKAVAVAGDISQRATADELV 81 (306)
T ss_pred cccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-CCeEEEEeCCCCCHHHHHHHH
Confidence 45677889999999999999999999999999999999998853 4566677777643 668899999999999998887
Q ss_pred Hh---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CCCcEEEEecCCccccc
Q 017757 107 DE---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN----GGPASIALMSSQAGQCW 179 (366)
Q Consensus 107 ~~---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~----~~~g~iv~vsS~~~~~~ 179 (366)
++ ++++|++|||||......+.+.+.++|++++++|+.+++++++++.++|+++.. ...|+||++||.++..
T Consensus 82 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~- 160 (306)
T PRK07792 82 ATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV- 160 (306)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc-
Confidence 65 589999999999987777888999999999999999999999999999976421 1237999999998876
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.++.. .|++||+|+.+|+++++.|+.++||+||+|+|| +.
T Consensus 161 ---------------------~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~ 201 (306)
T PRK07792 161 ---------------------GPVGQA-----------------NYGAAKAGITALTLSAARALGRYGVRANAICPR-AR 201 (306)
T ss_pred ---------------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CC
Confidence 556666 899999999999999999999999999999999 58
Q ss_pred CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 260 TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 260 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
|++........ ++. .. .......|++++..+.||+ ++.+.++||+++.+|||..
T Consensus 202 t~~~~~~~~~~---------------~~~-~~------~~~~~~~pe~va~~v~~L~----s~~~~~~tG~~~~v~gg~~ 255 (306)
T PRK07792 202 TAMTADVFGDA---------------PDV-EA------GGIDPLSPEHVVPLVQFLA----SPAAAEVNGQVFIVYGPMV 255 (306)
T ss_pred Cchhhhhcccc---------------chh-hh------hccCCCCHHHHHHHHHHHc----CccccCCCCCEEEEcCCeE
Confidence 88754321100 010 00 1123347889999999999 9999999999999999975
Q ss_pred HHH------HHH----hhhhhHHHHHHHHhh
Q 017757 340 RFV------ALC----FQWNWYGSIEKWHAQ 360 (366)
Q Consensus 340 ~~~------~~~----~~~~~~~~~~~~~~~ 360 (366)
..+ ..+ .+|.-.+....|.+-
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (306)
T PRK07792 256 TLVAAPVVERRFDADGDAWDPGELSATLRDY 286 (306)
T ss_pred EEEeeeeecceecCCCCCCCHHHHHHHHHHH
Confidence 532 111 235555666677653
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=272.29 Aligned_cols=244 Identities=24% Similarity=0.303 Sum_probs=203.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|++|||||+++||++++++|+++|++|++++|+. +. ..+.++.++++|+++++++++++++
T Consensus 3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LT-QEDYPFATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hh-hcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999986 11 1245788999999999999988776
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|.|++++ .++|+++||..+..
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~~ss~~~~~--------- 140 (252)
T PRK08220 73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR---SGAIVTVGSNAAHV--------- 140 (252)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CCEEEEECCchhcc---------
Confidence 57899999999988777888889999999999999999999999999998765 57999999987765
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+++++++++++.|++++||+||+|+||+++|++.....
T Consensus 141 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~ 190 (252)
T PRK08220 141 -------------PRIGMA-----------------AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLW 190 (252)
T ss_pred -------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhc
Confidence 555566 89999999999999999999999999999999999999765422
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
...... ........+......+.+++..++|++..+.||+ ++.+.++||+++.+|||.+.
T Consensus 191 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~g~~i~~~gg~~~ 250 (252)
T PRK08220 191 VDEDGE---------QQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLA----SDLASHITLQDIVVDGGATL 250 (252)
T ss_pred cchhhh---------hhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHh----cchhcCccCcEEEECCCeec
Confidence 110000 0001111233445567889999999999999999 99999999999999999653
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=272.23 Aligned_cols=245 Identities=25% Similarity=0.313 Sum_probs=206.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++|++|||||+++||.++|++|+++|++|++++|+.++++...+++... +.++.++++|++|++++++++++
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-GIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999988887777766543 55788899999999999777665
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL-IKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~-l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....+..+.+.++|++++++|+.+++.+++++.++ |.+++ .+++|++||..+..
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~---~~~~v~~sS~~~~~--------- 154 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG---YGRIINVASVAGLG--------- 154 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC---CeEEEEECChhhcc---------
Confidence 478999999999876667778899999999999999999999999998 66544 57999999987764
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+.. ..+...|+++|+++++++++++.++.++||++|+|+||+++|++..+.
T Consensus 155 -------------~~~~~-------------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~- 207 (259)
T PRK08213 155 -------------GNPPE-------------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT- 207 (259)
T ss_pred -------------CCCcc-------------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh-
Confidence 22211 011228999999999999999999999999999999999999875432
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+...+.+....+.++++.++|++..+.||+ ++.+.+++|+.+.+|||.+
T Consensus 208 ------------------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~G~~~~~~~~~~ 257 (259)
T PRK08213 208 ------------------LERLGEDLLAHTPLGRLGDDEDLKGAALLLA----SDASKHITGQILAVDGGVS 257 (259)
T ss_pred ------------------hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCccCCEEEECCCee
Confidence 1233444566778889999999999999999 9999999999999999964
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=267.08 Aligned_cols=230 Identities=31% Similarity=0.447 Sum_probs=194.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
.++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|++++++++++ +
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-GFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999999998888887777644 56788999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||......+.+.+.+++++++++|+.+++++++.++|.|.+++. .++||++||.++..
T Consensus 82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~--~g~iv~isS~~~~~----------- 148 (275)
T PRK05876 82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT--GGHVVFTASFAGLV----------- 148 (275)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CCEEEEeCChhhcc-----------
Confidence 78999999999988888889999999999999999999999999999987642 47999999998876
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+.+|+++++.|+.++||+|++|+||.++|++..+....
T Consensus 149 -----------~~~~~~-----------------~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~ 200 (275)
T PRK05876 149 -----------PNAGLG-----------------AYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERI 200 (275)
T ss_pred -----------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhh
Confidence 666677 9999999999999999999999999999999999999986543211
Q ss_pred CCc---------chhhhhccCCCCCHHHHHHHHHhhhhCCCeEee
Q 017757 270 RPR---------LTSIIAASSGAMKADEVAKKALDGIKSGSFIVP 305 (366)
Q Consensus 270 ~~~---------~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~ 305 (366)
... ...........++|+++++.++..+..++....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~~~~~~ 245 (275)
T PRK05876 201 RGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVL 245 (275)
T ss_pred cCccccccccccccccccccccCCCHHHHHHHHHHHHHcCCeEEe
Confidence 100 000001112357999999999999999975543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=270.76 Aligned_cols=236 Identities=20% Similarity=0.211 Sum_probs=194.6
Q ss_pred EEEEEcCCChhHHHHHHHHHH----CCCeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHhc----
Q 017757 39 HVFITGGSSGIGLALAHQAAK----EGARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEA---- 109 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~----~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~~---- 109 (366)
+++||||++|||+++|++|++ +|++|++++|+.+.++++.+++... .+.++.++++|++|.+++++++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 7999999999999988888888653 2457889999999999999888653
Q ss_pred CC----CcEEEEcCCCCCCC--CccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 110 GP----VDVLVVNQGVFVPG--ELEV-QSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 110 ~~----id~vi~nAG~~~~~--~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
+. .|++|||||..... ...+ .+.+++++++++|+.+++.+++.++|.|++++. ..++||++||..+..
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~-~~~~iv~isS~~~~~---- 156 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG-LNRTVVNISSLCAIQ---- 156 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC-CCCEEEEECCHHhCC----
Confidence 32 36999999975432 2333 357899999999999999999999999987531 247999999998876
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++
T Consensus 157 ------------------~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~ 201 (256)
T TIGR01500 157 ------------------PFKGWA-----------------LYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM 201 (256)
T ss_pred ------------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH
Confidence 666667 999999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
.+...... .++ +..+.+....+.+|+.+|+|++..+.||+ + +++++||+.+.
T Consensus 202 ~~~~~~~~-------------~~~-~~~~~~~~~~~~~~~~~p~eva~~~~~l~----~-~~~~~~G~~~~ 253 (256)
T TIGR01500 202 QQQVREES-------------VDP-DMRKGLQELKAKGKLVDPKVSAQKLLSLL----E-KDKFKSGAHVD 253 (256)
T ss_pred HHHHHHhc-------------CCh-hHHHHHHHHHhcCCCCCHHHHHHHHHHHH----h-cCCcCCcceee
Confidence 76532211 112 23345667789999999999999999998 5 56799998764
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=275.77 Aligned_cols=239 Identities=20% Similarity=0.212 Sum_probs=191.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHH----HHHH----Hh
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAV----KTAL----DE 108 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v----~~~~----~~ 108 (366)
++++||||++|||++++++|+++|++|++++| +.+.+++..+++....+.++.++.+|++|.+++ ++++ +.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 68999999999999999999999999998865 456677776777544455777899999999865 3333 33
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCCcEEEEecCC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSL-----------DEVRLMIDVNITGSFHMIKAALPLIKKRQ---NGGPASIALMSSQ 174 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~-----------~~~~~~~~vN~~~~~~l~~~~~~~l~~~~---~~~~g~iv~vsS~ 174 (366)
++++|+||||||...+.++.+.+. +++.+++++|+.++++++++++|+|+++. .+..++|++++|.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 588999999999876655544443 35899999999999999999999996542 1235789999998
Q ss_pred ccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEc
Q 017757 175 AGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIF 254 (366)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~ 254 (366)
.+.. +.++.. +|++||+|+++|+++++.|+.++||+||+|+
T Consensus 162 ~~~~----------------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~ 202 (267)
T TIGR02685 162 MTDQ----------------------PLLGFT-----------------MYTMAKHALEGLTRSAALELAPLQIRVNGVA 202 (267)
T ss_pred hccC----------------------CCcccc-----------------hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEe
Confidence 8765 666666 9999999999999999999999999999999
Q ss_pred CCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCC-CeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 255 PPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG-SFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 255 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g-r~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
||+++|+... + .+..+.+....+.+ ++..|+|++..++||+ ++.+.++||+.+.
T Consensus 203 PG~~~~~~~~--------------------~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~G~~~~ 257 (267)
T TIGR02685 203 PGLSLLPDAM--------------------P-FEVQEDYRRKVPLGQREASAEQIADVVIFLV----SPKAKYITGTCIK 257 (267)
T ss_pred cCCccCcccc--------------------c-hhHHHHHHHhCCCCcCCCCHHHHHHHHHHHh----CcccCCcccceEE
Confidence 9999876211 1 11222333344554 6889999999999999 9999999999999
Q ss_pred HHHHHHH
Q 017757 334 VAAGLIR 340 (366)
Q Consensus 334 ~dgG~~~ 340 (366)
+|||++.
T Consensus 258 v~gg~~~ 264 (267)
T TIGR02685 258 VDGGLSL 264 (267)
T ss_pred ECCceec
Confidence 9999764
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=271.46 Aligned_cols=241 Identities=23% Similarity=0.275 Sum_probs=206.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+++++++||||++|||++++++|+++|++|++ .+|+.++.+++.++++.. +.++.++.+|++|++++++++++ +
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999999876 588888777777777654 56788999999999999988876 4
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.++++.++++|+.+++.++++++|.|++++ .++||++||..+..
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~----------- 146 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG---GGKIISLSSLGSIR----------- 146 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CeEEEEEcchhhcc-----------
Confidence 7899999999988777888899999999999999999999999999998765 68999999987765
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.+... .|++||++++.++++++.++.+.||+||+|+||+++|++.....
T Consensus 147 -----------~~~~~~-----------------~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~-- 196 (250)
T PRK08063 147 -----------YLENYT-----------------TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFP-- 196 (250)
T ss_pred -----------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhcc--
Confidence 555666 89999999999999999999999999999999999999764321
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...++.+......+.+++..++|++..+.+++ ++...+++|+.+.+|||.+
T Consensus 197 ---------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~----~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 197 ---------------NREELLEDARAKTPAGRMVEPEDVANAVLFLC----SPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred ---------------CchHHHHHHhcCCCCCCCcCHHHHHHHHHHHc----CchhcCccCCEEEECCCee
Confidence 11233334445566788999999999999998 8888899999999999965
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=265.65 Aligned_cols=218 Identities=17% Similarity=0.137 Sum_probs=183.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++..+++|+++++++++++++
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999998888887654 55788899999999999888765
Q ss_pred cC-CCcEEEEcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 AG-PVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 ~~-~id~vi~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++ ++|++|||||.. .+..+.+.+.++|.+.+++|+.+++.+++.++|+|+++++ .|+||++||..+
T Consensus 80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~--~g~Iv~isS~~~---------- 147 (227)
T PRK08862 80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK--KGVIVNVISHDD---------- 147 (227)
T ss_pred hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CceEEEEecCCC----------
Confidence 57 899999999854 3457788899999999999999999999999999987542 589999999653
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
.+... .|++||+|+.+|+++++.|++++|||||+|+||+++|+...
T Consensus 148 ---------------~~~~~-----------------~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~-- 193 (227)
T PRK08862 148 ---------------HQDLT-----------------GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL-- 193 (227)
T ss_pred ---------------CCCcc-----------------hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc--
Confidence 23345 89999999999999999999999999999999999998311
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
++++..+. . +|++..+.||+ + +.|+||..+.
T Consensus 194 ------------------~~~~~~~~-~-----------~~~~~~~~~l~----~--~~~~tg~~~~ 224 (227)
T PRK08862 194 ------------------DAVHWAEI-Q-----------DELIRNTEYIV----A--NEYFSGRVVE 224 (227)
T ss_pred ------------------CHHHHHHH-H-----------HHHHhheeEEE----e--cccccceEEe
Confidence 12221111 1 68899999998 5 6799997653
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=268.64 Aligned_cols=239 Identities=25% Similarity=0.305 Sum_probs=205.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
|.+++|+++||||++|||+++|++|+++|++|+++.|+.+ ..++..+++... +.++.++.+|+++.+++++++++
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GGRAIAVQADVADAAAVTRLFDAAET 79 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999988877543 455555555543 56899999999999999888775
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....++.+.+.+++++++++|+.+++.++++++|.|++ .++|+++||..+..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~~ss~~~~~--------- 145 (245)
T PRK12937 80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-----GGRIINLSTSVIAL--------- 145 (245)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-----CcEEEEEeeccccC---------
Confidence 578999999999877777788899999999999999999999999999865 47999999987765
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+... .|+++|+++++++++++.++.+.||+|++|+||+++|++....
T Consensus 146 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~- 194 (245)
T PRK12937 146 -------------PLPGYG-----------------PYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG- 194 (245)
T ss_pred -------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc-
Confidence 566666 8999999999999999999999999999999999999975321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
.. ++..+.+.+..+.++...++|++..+.||+ ++.+.+++|+.+.+|||+
T Consensus 195 ----------------~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~----~~~~~~~~g~~~~~~~g~ 244 (245)
T PRK12937 195 ----------------KS-AEQIDQLAGLAPLERLGTPEEIAAAVAFLA----GPDGAWVNGQVLRVNGGF 244 (245)
T ss_pred ----------------CC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CccccCccccEEEeCCCC
Confidence 11 233456677788899999999999999999 999999999999999985
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=269.03 Aligned_cols=244 Identities=30% Similarity=0.324 Sum_probs=210.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++++++++||||+|+||++++++|+++|++|++++|+.++.++....+.. +.++.++.+|++|++++++++++
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAALER 78 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999887777666654 56788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.+++.|.+++ .++||++||..+..
T Consensus 79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~--------- 146 (251)
T PRK07231 79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG---GGAIVNVASTAGLR--------- 146 (251)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC---CcEEEEEcChhhcC---------
Confidence 5789999999998543 4577889999999999999999999999999998765 57999999988776
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|+.+|+++..+++.++.+++++||+|++|+||+++|++.....
T Consensus 147 -------------~~~~~~-----------------~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~ 196 (251)
T PRK07231 147 -------------PRPGLG-----------------WYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFM 196 (251)
T ss_pred -------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhh
Confidence 666666 89999999999999999999999999999999999999866532
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ..++..+......+.+++..++|++..+.+|+ ++.+.+++|+.+.+|||.+
T Consensus 197 ~~---------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~g~~~~~~gg~~ 249 (251)
T PRK07231 197 GE---------------PTPENRAKFLATIPLGRLGTPEDIANAALFLA----SDEASWITGVTLVVDGGRC 249 (251)
T ss_pred cc---------------cChHHHHHHhcCCCCCCCcCHHHHHHHHHHHh----CccccCCCCCeEEECCCcc
Confidence 21 01233345566778889999999999999999 8888999999999999954
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=270.54 Aligned_cols=241 Identities=27% Similarity=0.346 Sum_probs=206.0
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHh----cCCCc
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE----AGPVD 113 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~----~~~id 113 (366)
++||||++|||++++++|+++|++|++++|+ .+.+++..+++....+ ..+..+++|++|++++++++++ ++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999999999999998 6667777666654332 3456789999999999888765 57899
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
++|||||......+.+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||.++..
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ii~~ss~~~~~--------------- 143 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ---PASIVNISSVAAFK--------------- 143 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC---CcEEEEecChhhcc---------------
Confidence 999999998778888899999999999999999999999999998865 57999999998876
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCC--cEEEEEcCCCCCCCChhhhhhcCC
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADD--IHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|+++|+++.+++++++.|+++++ |+|++|+||+++|++.......
T Consensus 144 -------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~-- 197 (251)
T PRK07069 144 -------AEPDYT-----------------AYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQR-- 197 (251)
T ss_pred -------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhh--
Confidence 666666 899999999999999999998765 9999999999999987653211
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..+++....+.+.++.+++..++|++..++||+ ++.+.++||+.+.+|||++.
T Consensus 198 ------------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~i~~~~g~~~ 250 (251)
T PRK07069 198 ------------LGEEEATRKLARGVPLGRLGEPDDVAHAVLYLA----SDESRFVTGAELVIDGGICA 250 (251)
T ss_pred ------------ccchhHHHHHhccCCCCCCcCHHHHHHHHHHHc----CccccCccCCEEEECCCeec
Confidence 123444455666778889999999999999998 88899999999999999753
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=273.01 Aligned_cols=235 Identities=25% Similarity=0.334 Sum_probs=197.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-------HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-------LEEAKQSIQLATGIEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~ 105 (366)
++++||+++||||++|||+++|++|+++|++|++++|+.+. +++..+++... +.++.++++|++++++++++
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~ 80 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDVRDEDQVAAA 80 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHH
Confidence 56899999999999999999999999999999999998653 34455555443 56788999999999999888
Q ss_pred HHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 106 LDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 106 ~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
+++ ++++|++|||||.....++.+.+.+++++++++|+.+++.++++++|+|+++. .++|+++||..+..
T Consensus 81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~--- 154 (273)
T PRK08278 81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE---NPHILTLSPPLNLD--- 154 (273)
T ss_pred HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC---CCEEEEECCchhcc---
Confidence 765 47899999999987777788889999999999999999999999999998865 57999999977654
Q ss_pred cccCccCccccccccccCCCC--CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC-CC
Q 017757 182 KNTNMKGINENKLCESSGKGH--GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP-DT 258 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG-~v 258 (366)
+. ++.. .|++||+|+++++++++.|+.++||+||+|+|| ++
T Consensus 155 -------------------~~~~~~~~-----------------~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i 198 (273)
T PRK08278 155 -------------------PKWFAPHT-----------------AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTI 198 (273)
T ss_pred -------------------ccccCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcc
Confidence 33 4555 899999999999999999999999999999999 68
Q ss_pred CCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 259 ETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 259 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
+|+..+..... ..+.++...|++++..+.+|+ ++.+.++||+.+ +|+++
T Consensus 199 ~t~~~~~~~~~--------------------------~~~~~~~~~p~~va~~~~~l~----~~~~~~~~G~~~-~~~~~ 247 (273)
T PRK08278 199 ATAAVRNLLGG--------------------------DEAMRRSRTPEIMADAAYEIL----SRPAREFTGNFL-IDEEV 247 (273)
T ss_pred ccHHHHhcccc--------------------------cccccccCCHHHHHHHHHHHh----cCccccceeEEE-eccch
Confidence 99865432110 012346778899999999999 888899999977 68887
Q ss_pred HHH
Q 017757 339 IRF 341 (366)
Q Consensus 339 ~~~ 341 (366)
.+.
T Consensus 248 ~~~ 250 (273)
T PRK08278 248 LRE 250 (273)
T ss_pred hhc
Confidence 754
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=268.43 Aligned_cols=246 Identities=26% Similarity=0.326 Sum_probs=210.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++++|+++||||+|+||++++++|+++|++|++++|+.+..++..+++. .+.++..+++|++|++++++++++
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~ 78 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFVAAR 78 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999887777766665 356789999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||...+..+.+.+.+++++++++|+.+++.+++.+++.|++++ .++|+++||..+..
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~ii~~sS~~~~~---------- 145 (252)
T PRK06138 79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG---GGSIVNTASQLALA---------- 145 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC---CeEEEEECChhhcc----------
Confidence 47899999999988777778889999999999999999999999999998765 57999999988776
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|+++|+++..++++++.|+.+.||+|++|+||.+.|++..+...
T Consensus 146 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~ 196 (252)
T PRK06138 146 ------------GGRGRA-----------------AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFA 196 (252)
T ss_pred ------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhc
Confidence 556666 899999999999999999999999999999999999998665321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ...++.+........+.+++..++|++..+.+++ ++...+++|+.+.+|||++
T Consensus 197 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~----~~~~~~~~g~~~~~~~g~~ 250 (252)
T PRK06138 197 R-------------HADPEALREALRARHPMNRFGTAEEVAQAALFLA----SDESSFATGTTLVVDGGWL 250 (252)
T ss_pred c-------------ccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCccCCEEEECCCee
Confidence 1 1234444444434455667888999999999998 8888899999999999976
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=297.36 Aligned_cols=243 Identities=25% Similarity=0.315 Sum_probs=207.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+.+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|++++++++++ +
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence 458999999999999999999999999999999999988877766554 45678899999999999888766 5
Q ss_pred CCCcEEEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 110 GPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 110 ~~id~vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
+++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++. .++||++||..+..
T Consensus 78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~~iv~isS~~~~~--------- 146 (520)
T PRK06484 78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH--GAAIVNVASGAGLV--------- 146 (520)
T ss_pred CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CCeEEEECCcccCC---------
Confidence 89999999999843 356778899999999999999999999999999987542 24999999998877
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|+++|+|+.+|+++++.|+.++||+||+|+||+|+|++.....
T Consensus 147 -------------~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~ 196 (520)
T PRK06484 147 -------------ALPKRT-----------------AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELE 196 (520)
T ss_pred -------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhc
Confidence 666667 99999999999999999999999999999999999999865431
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
... ....+.+...++.+++..+++++..+.||+ ++.+.+++|+++.+|||+...
T Consensus 197 ~~~----------------~~~~~~~~~~~~~~~~~~~~~va~~v~~l~----~~~~~~~~G~~~~~~gg~~~~ 250 (520)
T PRK06484 197 RAG----------------KLDPSAVRSRIPLGRLGRPEEIAEAVFFLA----SDQASYITGSTLVVDGGWTVY 250 (520)
T ss_pred ccc----------------hhhhHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCccCceEEecCCeecc
Confidence 100 111123344567888999999999999999 999999999999999998754
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=268.93 Aligned_cols=246 Identities=18% Similarity=0.166 Sum_probs=198.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.... +..+.++++|++|++++++++++ +
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999999999988888877775433 33566779999999999888875 4
Q ss_pred CCCcEEEEcCCCCC---CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 110 GPVDVLVVNQGVFV---PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 110 ~~id~vi~nAG~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
+++|++|||||... ...+.+.+.+++++.+++|+.+++.++++++|+|++++ .++||++||.++...+
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~~~------ 152 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG---GGNLVNISSIYGVVAP------ 152 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC---CceEEEEechhhhccc------
Confidence 78999999998643 34677889999999999999999999999999998765 5799999998775410
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
.. . .....+......|++||+++++++++++.|+.++||+||+|+||.+.|+...
T Consensus 153 ----------------~~-~------~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~-- 207 (256)
T PRK09186 153 ----------------KF-E------IYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE-- 207 (256)
T ss_pred ----------------cc-h------hccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH--
Confidence 00 0 0000001111279999999999999999999999999999999999876321
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+.+......+.+++..++|++..+.|++ ++.+.+++|+.+.+|||++
T Consensus 208 ---------------------~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~g~~~~~~~g~~ 255 (256)
T PRK09186 208 ---------------------AFLNAYKKCCNGKGMLDPDDICGTLVFLL----SDQSKYITGQNIIVDDGFS 255 (256)
T ss_pred ---------------------HHHHHHHhcCCccCCCCHHHhhhhHhhee----ccccccccCceEEecCCcc
Confidence 12222233345678899999999999999 9999999999999999964
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=267.22 Aligned_cols=212 Identities=16% Similarity=0.173 Sum_probs=177.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcEEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVLVV 117 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~vi~ 117 (366)
+++||||++|||++++++|+++|++|++++|+.+++++..+++ ++..+++|++|+++++++++++ +++|++||
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 4899999999999999999999999999999988777665543 3567889999999999999876 47999999
Q ss_pred cCCCCCC------CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 118 NQGVFVP------GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 118 nAG~~~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
|||.... ..+.+ +.++|++++++|+.++++++|+++|.|++ .|+||++||.+.
T Consensus 76 ~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~g~Iv~isS~~~--------------- 134 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS-----GGSIISVVPENP--------------- 134 (223)
T ss_pred CCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCeEEEEecCCC---------------
Confidence 9985321 12333 57899999999999999999999999964 479999999641
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+... .|++||+|+.+|+++++.|++++|||||+|+||+++|++.+...
T Consensus 135 -----------~~~~-----------------~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~---- 182 (223)
T PRK05884 135 -----------PAGS-----------------AEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS---- 182 (223)
T ss_pred -----------CCcc-----------------ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc----
Confidence 1234 89999999999999999999999999999999999998542110
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..+. ..++|++..+.||+ ++.+.++||+++.+|||++.
T Consensus 183 ------------------------~~p~---~~~~~ia~~~~~l~----s~~~~~v~G~~i~vdgg~~~ 220 (223)
T PRK05884 183 ------------------------RTPP---PVAAEIARLALFLT----TPAARHITGQTLHVSHGALA 220 (223)
T ss_pred ------------------------CCCC---CCHHHHHHHHHHHc----CchhhccCCcEEEeCCCeec
Confidence 0111 27889999999999 99999999999999999864
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=265.73 Aligned_cols=239 Identities=24% Similarity=0.327 Sum_probs=204.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++|+++||||+++||++++++|+++|+.|++.+|+.+++++..+.+ +.++.++.+|+++.+++++++++
T Consensus 2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T PRK12936 2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GERVKIFPANLSDRDEVKALGQKAEAD 77 (245)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999887776654433 45688899999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||...+.++.+.+.+++++++++|+.+++++++++.+.+.+++ .++||++||..+..
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~---------- 144 (245)
T PRK12936 78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR---YGRIINITSVVGVT---------- 144 (245)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC---CCEEEEECCHHhCc----------
Confidence 57899999999988777777889999999999999999999999999887654 57999999988776
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+++|+|+.++++.++.++.+.|+++++|+||+++|++.....
T Consensus 145 ------------~~~~~~-----------------~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~- 194 (245)
T PRK12936 145 ------------GNPGQA-----------------NYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN- 194 (245)
T ss_pred ------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC-
Confidence 666666 89999999999999999999999999999999999998754321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++.-+.....++.+++..+++++..+.||+ ++...+++|+++.+|||+..
T Consensus 195 ------------------~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~----~~~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK12936 195 ------------------DKQKEAIMGAIPMKRMGTGAEVASAVAYLA----SSEAAYVTGQTIHVNGGMAM 244 (245)
T ss_pred ------------------hHHHHHHhcCCCCCCCcCHHHHHHHHHHHc----CccccCcCCCEEEECCCccc
Confidence 111123344567888999999999999999 88888999999999999753
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=267.90 Aligned_cols=238 Identities=29% Similarity=0.344 Sum_probs=200.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
.++||+++||||++|||.+++++|+++|++|++++|+..++++..+++. ..++++|+++++++++++++ .
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999999999877666555442 25789999999999988876 4
Q ss_pred CCCcEEEEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 110 GPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 110 ~~id~vi~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
+++|++|||||...+ ..+.+.+.+++++.+++|+.+++++++.++|+|++++ .++||++||..+..
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~g~iv~~sS~~~~~--------- 145 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG---KGSIINTASFVAVM--------- 145 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC---CcEEEEEcchhhcc---------
Confidence 789999999997643 4566788999999999999999999999999998765 57999999987654
Q ss_pred CccccccccccCCCC-CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 188 GINENKLCESSGKGH-GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+. ++.. .|+++|+|+.+++++++.++.++||+|++|+||.++|++....
T Consensus 146 -------------g~~~~~~-----------------~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~ 195 (255)
T PRK06057 146 -------------GSATSQI-----------------SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL 195 (255)
T ss_pred -------------CCCCCCc-----------------chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh
Confidence 33 2344 8999999999999999999999999999999999999986542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ..+++..+. ...++.+++..++|++..+.||+ ++.+.+++|+++.+|||++
T Consensus 196 ~~---------------~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~----~~~~~~~~g~~~~~~~g~~ 248 (255)
T PRK06057 196 FA---------------KDPERAARR-LVHVPMGRFAEPEEIAAAVAFLA----SDDASFITASTFLVDGGIS 248 (255)
T ss_pred cc---------------CCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHh----CccccCccCcEEEECCCee
Confidence 11 123444333 33467889999999999999999 9999999999999999965
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=265.56 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=210.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|++|||||+++||++++++|+++|++|++++|++++.++..+++... +.++.++++|++|.+++++++++ +
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-GGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-CceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999999999998888888877553 56788999999999999888765 4
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI-KKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l-~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||........+.+.+++++++++|+.+++.+++.+++.| ++.+ .++||++||..+..
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~---~~~iv~~ss~~~~~---------- 149 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR---GGVVIYMGSVHSHE---------- 149 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC---CcEEEEEcchhhcC----------
Confidence 789999999998877777788999999999999999999999999999 5543 67999999987765
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+++|+++.+++++++.++++.||++|+|+||+++|++......
T Consensus 150 ------------~~~~~~-----------------~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~ 200 (262)
T PRK13394 150 ------------ASPLKS-----------------AYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIP 200 (262)
T ss_pred ------------CCCCCc-----------------ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhH
Confidence 555555 899999999999999999999999999999999999997654322
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHH-hhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKAL-DGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~-~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.... ......++..+.++ ...+.+++..++|++..+.+++ +....+++|+.+.+|||+.
T Consensus 201 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~----~~~~~~~~g~~~~~~~g~~ 260 (262)
T PRK13394 201 EQAK--------ELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLS----SFPSAALTGQSFVVSHGWF 260 (262)
T ss_pred hhhh--------ccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc----CccccCCcCCEEeeCCcee
Confidence 1100 01123444444443 3456678999999999999999 7777889999999999963
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=269.56 Aligned_cols=244 Identities=20% Similarity=0.248 Sum_probs=189.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc----hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG----KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~----~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
++.+++|+++||||++|||+++|++|+++|++|++++++. +..++..+++... +.++.++++|++++++++++++
T Consensus 3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~ 81 (257)
T PRK12744 3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-GAKAVAFQADLTTAAAVEKLFD 81 (257)
T ss_pred CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-CCcEEEEecCcCCHHHHHHHHH
Confidence 4568899999999999999999999999999977665532 3344444455433 5578899999999999998887
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEe-cCCcccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALM-SSQAGQCWTIK 182 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~v-sS~~~~~~~~~ 182 (366)
+ ++++|++|||||......+.+.+.+++++++++|+.+++.+++++.|+|++ .++++++ ||..+.
T Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~~~iv~~~ss~~~~----- 151 (257)
T PRK12744 82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-----NGKIVTLVTSLLGA----- 151 (257)
T ss_pred HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-----CCCEEEEecchhcc-----
Confidence 5 478999999999877777888899999999999999999999999999975 3577766 454332
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
..+... .|++||+|+++++++++.|+.++||+||+|+||++.|++
T Consensus 152 ------------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~ 196 (257)
T PRK12744 152 ------------------FTPFYS-----------------AYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF 196 (257)
T ss_pred ------------------cCCCcc-----------------cchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence 233445 899999999999999999999999999999999999997
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
....... .. ....+.. ........+++..++|++..+.||+ ++ +.++||+++.+|||+.
T Consensus 197 ~~~~~~~--~~----------~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~----~~-~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 197 FYPQEGA--EA----------VAYHKTA-AALSPFSKTGLTDIEDIVPFIRFLV----TD-GWWITGQTILINGGYT 255 (257)
T ss_pred hcccccc--ch----------hhccccc-ccccccccCCCCCHHHHHHHHHHhh----cc-cceeecceEeecCCcc
Confidence 5431110 00 0000000 0011122347889999999999999 75 6799999999999964
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=263.74 Aligned_cols=241 Identities=26% Similarity=0.253 Sum_probs=205.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
..+++++++++||||+++||+++++.|+++|++|++++|+.+++++..+.. ...++.+|+++.++++++++..+
T Consensus 3 ~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~ 76 (245)
T PRK07060 3 MAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAAAG 76 (245)
T ss_pred cccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHHhC
Confidence 346789999999999999999999999999999999999987665544332 24578899999999999999888
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||........+.+.+++++++++|+.+++.+++++.+.++++.. .++||++||..+..
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~iv~~sS~~~~~------------ 142 (245)
T PRK07060 77 AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR--GGSIVNVSSQAALV------------ 142 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--CcEEEEEccHHHcC------------
Confidence 9999999999877777778899999999999999999999999999976431 47999999988776
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.+... .|++||++++.++++++.++.+.||++++|+||++.|++......
T Consensus 143 ----------~~~~~~-----------------~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~-- 193 (245)
T PRK07060 143 ----------GLPDHL-----------------AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWS-- 193 (245)
T ss_pred ----------CCCCCc-----------------HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhcc--
Confidence 555566 899999999999999999999999999999999999997543210
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ....+.+....+.+++..++|++..+.+|+ ++.+.+++|+.+.+|||++
T Consensus 194 --------------~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~----~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK07060 194 --------------D-PQKSGPMLAAIPLGRFAEVDDVAAPILFLL----SDAASMVSGVSLPVDGGYT 243 (245)
T ss_pred --------------C-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CcccCCccCcEEeECCCcc
Confidence 1 122234555678889999999999999999 8888999999999999974
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=262.83 Aligned_cols=228 Identities=24% Similarity=0.336 Sum_probs=189.6
Q ss_pred cCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Q 017757 27 RPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 27 ~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~ 106 (366)
+++...+.+++|+++||||+||||+++|++|+++|++|++++|+.+.+++..+++... +.++.++++|++|.+++++++
T Consensus 30 ~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~-~~~~~~~~~Dl~d~~~v~~~~ 108 (293)
T PRK05866 30 RPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA-GGDAMAVPCDLSDLDAVDALV 108 (293)
T ss_pred CCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHH
Confidence 3445567788999999999999999999999999999999999998888887777544 557889999999999999888
Q ss_pred Hh----cCCCcEEEEcCCCCCCCCccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 107 DE----AGPVDVLVVNQGVFVPGELEVQ--SLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 107 ~~----~~~id~vi~nAG~~~~~~~~~~--~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
++ ++++|++|||||......+.+. ++++++.++++|+.|++.++++++|.|++++ .++||++||.++...
T Consensus 109 ~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~~- 184 (293)
T PRK05866 109 ADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG---DGHIINVATWGVLSE- 184 (293)
T ss_pred HHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CcEEEEECChhhcCC-
Confidence 74 5899999999998766655543 5688999999999999999999999998865 579999999755420
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.+... .|++||+|+++++++++.|+.++||+|++|+||+++|
T Consensus 185 --------------------~~p~~~-----------------~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T 227 (293)
T PRK05866 185 --------------------ASPLFS-----------------VYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVAT 227 (293)
T ss_pred --------------------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccC
Confidence 234444 8999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEee
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVP 305 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~ 305 (366)
++........ ....++||++|+.+++.+..++....
T Consensus 228 ~~~~~~~~~~---------~~~~~~pe~vA~~~~~~~~~~~~~~~ 263 (293)
T PRK05866 228 PMIAPTKAYD---------GLPALTADEAAEWMVTAARTRPVRIA 263 (293)
T ss_pred cccccccccc---------CCCCCCHHHHHHHHHHHHhcCCeEEc
Confidence 9875421110 12347999999999999988764443
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=259.42 Aligned_cols=211 Identities=19% Similarity=0.243 Sum_probs=178.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id 113 (366)
++++||||++|||+++|++|+ +|++|++++|+.++++++.++++...+..+.++++|++|++++++++++ ++++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999 5999999999999999988888765444688999999999999988766 48999
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
++|||||........+.+.+++.+++++|+.+++.+++.++|.|.+++. .|+||++||.++..
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--~g~Iv~isS~~~~~--------------- 142 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTA--PAAIVAFSSIAGWR--------------- 142 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC--CCEEEEEecccccc---------------
Confidence 9999999876655666778888999999999999999999999987532 47999999998876
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
+.++.. .|++||+|+.+|+++++.|+.++||+||+|+||+++|++.......
T Consensus 143 -------~~~~~~-----------------~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~---- 194 (246)
T PRK05599 143 -------ARRANY-----------------VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA---- 194 (246)
T ss_pred -------CCcCCc-----------------chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC----
Confidence 666666 9999999999999999999999999999999999999976432110
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
....+||++++.++..+..++
T Consensus 195 -------~~~~~pe~~a~~~~~~~~~~~ 215 (246)
T PRK05599 195 -------PMSVYPRDVAAAVVSAITSSK 215 (246)
T ss_pred -------CCCCCHHHHHHHHHHHHhcCC
Confidence 012478888888887776653
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=261.68 Aligned_cols=238 Identities=26% Similarity=0.357 Sum_probs=202.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++++|+++||||++|||.++|++|+++|++|+++.+ +++..++..+++... +.++.++++|+++++++++++++
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-GHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999987654 455666665666543 56799999999999999988876
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||......+.+.+.+++++++++|+.+++.++++++|.|.+++ .+++|++||..+..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~---------- 148 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE---EGRIISISSIIGQA---------- 148 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEEcchhhcC----------
Confidence 57899999999998777777889999999999999999999999999998765 57999999988765
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++++++++.++.+.||++++|+||.++|++....
T Consensus 149 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-- 197 (247)
T PRK12935 149 ------------GGFGQT-----------------NYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV-- 197 (247)
T ss_pred ------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc--
Confidence 555555 8999999999999999999999999999999999999865431
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
++...+.....++.+++..++|++..++|++ ++ +.+++|+++.+|||.
T Consensus 198 -----------------~~~~~~~~~~~~~~~~~~~~edva~~~~~~~----~~-~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 198 -----------------PEEVRQKIVAKIPKKRFGQADEIAKGVVYLC----RD-GAYITGQQLNINGGL 245 (247)
T ss_pred -----------------cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHc----Cc-ccCccCCEEEeCCCc
Confidence 2444455566677888999999999999998 65 458999999999995
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=261.92 Aligned_cols=239 Identities=25% Similarity=0.267 Sum_probs=198.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
.|+++||||++|||.+++++|+++|++|+++. |+.+.+++..+++... +.++.++++|+++++++++++++ +++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-GGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999998764 5666666666666543 56789999999999999888765 478
Q ss_pred CcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 112 VDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 112 id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
+|++|||||...+ ..+.+.+.++++.++++|+.+++.+++.+++.+..++.+..++||++||.++..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~------------ 148 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL------------ 148 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC------------
Confidence 9999999998754 457788999999999999999999999999998876544457899999988765
Q ss_pred ccccccccCCCCCC-ccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 191 ENKLCESSGKGHGG-YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 191 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.+. .. .|++||+++++++++++.++.+.||+|++|+||+++|++.....
T Consensus 149 ----------~~~~~~~-----------------~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-- 199 (248)
T PRK06947 149 ----------GSPNEYV-----------------DYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-- 199 (248)
T ss_pred ----------CCCCCCc-----------------ccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC--
Confidence 4332 34 79999999999999999999999999999999999999754210
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
.++. .+......+.++...+++++..++||+ ++.+++++|+.+.+|||
T Consensus 200 ---------------~~~~-~~~~~~~~~~~~~~~~e~va~~~~~l~----~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 200 ---------------QPGR-AARLGAQTPLGRAGEADEVAETIVWLL----SDAASYVTGALLDVGGG 247 (248)
T ss_pred ---------------CHHH-HHHHhhcCCCCCCcCHHHHHHHHHHHc----CccccCcCCceEeeCCC
Confidence 1222 123334556788899999999999999 88889999999999997
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=266.19 Aligned_cols=245 Identities=23% Similarity=0.229 Sum_probs=208.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.+++++|++|||||+|+||++++++|+++|++|++++|+.++.++..+++.... +.++.++++|++|++++++++++
T Consensus 2 ~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (276)
T PRK05875 2 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT 81 (276)
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 356889999999999999999999999999999999999887777766665432 35788999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 --AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||.... .++.+.+.++++.++++|+.+++.+++++++.|.+++ .++|+++||..+..
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~~sS~~~~~------- 151 (276)
T PRK05875 82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG---GGSFVGISSIAASN------- 151 (276)
T ss_pred HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEechhhcC-------
Confidence 4789999999997543 5667789999999999999999999999999998755 57999999988765
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.+... .|+++|+++++++++++.++.+.+|++++|+||+++|++...
T Consensus 152 ---------------~~~~~~-----------------~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~ 199 (276)
T PRK05875 152 ---------------THRWFG-----------------AYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP 199 (276)
T ss_pred ---------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence 555566 899999999999999999999999999999999999997643
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ..+...+.+....+.++++.++|++..+.||+ +....+++|+.+.+|||..
T Consensus 200 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~g~~~~~~~g~~ 252 (276)
T PRK05875 200 IT-----------------ESPELSADYRACTPLPRVGEVEDVANLAMFLL----SDAASWITGQVINVDGGHM 252 (276)
T ss_pred cc-----------------cCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc----CchhcCcCCCEEEECCCee
Confidence 21 11333344455667788999999999999999 8888899999999999976
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=263.09 Aligned_cols=250 Identities=28% Similarity=0.377 Sum_probs=211.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
+++|+++||||+++||++++++|+++|++|++++|++++.++..+++... +.++..+.+|++|++++++++++ ++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA-GGKAIGVAMDVTDEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999998888777776543 56788999999999999888775 47
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||......+.+.+.++++.++++|+.+++.+++.+++.|++++ .++||++||.++..
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~iss~~~~~------------ 145 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG---GGRIINMASVHGLV------------ 145 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC---CeEEEEEcchhhcc------------
Confidence 899999999988888888889999999999999999999999999999865 67999999998876
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.++.. .|+++|+++.++++.++.++.+.||+|++|+||+++|++........
T Consensus 146 ----------~~~~~~-----------------~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~ 198 (258)
T PRK12429 146 ----------GSAGKA-----------------AYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDL 198 (258)
T ss_pred ----------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhh
Confidence 666666 99999999999999999999999999999999999999865422111
Q ss_pred CcchhhhhccCCCCCHHHHHH-HHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAK-KALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~-~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ....++++.... ......+.+++..++|++..+.+|+ ++....++|+++.+|||++
T Consensus 199 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~----~~~~~~~~g~~~~~~~g~~ 256 (258)
T PRK12429 199 A--------KERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLA----SFAAKGVTGQAWVVDGGWT 256 (258)
T ss_pred c--------cccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHc----CccccCccCCeEEeCCCEe
Confidence 0 001223444433 3334456678999999999999998 8778889999999999976
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=259.97 Aligned_cols=239 Identities=27% Similarity=0.282 Sum_probs=198.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
+|++|||||+++||.+++++|+++|++|+++++ +++..++..+++... +.++.++++|++|.+++++++++ +++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-GGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-CCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999999988874 445555555555433 45688899999999999888765 578
Q ss_pred CcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 112 VDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 112 id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
+|++|||||...+ ..+.+.+++++++++++|+.+++.+++++++.|+++.++.+++|+++||..+..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------ 148 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL------------ 148 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC------------
Confidence 9999999998754 467788999999999999999999999999999876444467999999988765
Q ss_pred ccccccccCCCCCC-ccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 191 ENKLCESSGKGHGG-YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 191 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.+. .. .|++||+++++++++++.++.++||+|++|+||.+.|++....
T Consensus 149 ----------~~~~~~~-----------------~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~--- 198 (248)
T PRK06123 149 ----------GSPGEYI-----------------DYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG--- 198 (248)
T ss_pred ----------CCCCCcc-----------------chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc---
Confidence 4443 24 6999999999999999999999999999999999999964321
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
..++ ..+.+....+.++...++|++..+.||+ ++...+++|+.+.+|||
T Consensus 199 --------------~~~~-~~~~~~~~~p~~~~~~~~d~a~~~~~l~----~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 199 --------------GEPG-RVDRVKAGIPMGRGGTAEEVARAILWLL----SDEASYTTGTFIDVSGG 247 (248)
T ss_pred --------------CCHH-HHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCccCCEEeecCC
Confidence 1122 3345556678888899999999999999 88888999999999987
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=266.40 Aligned_cols=239 Identities=29% Similarity=0.359 Sum_probs=196.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++++|++|++++++++++
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999888888887654 66888999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.+++++++++|+.+++++++.++|+|++++ .++||++||..+..
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~---~g~iV~isS~~~~~---------- 149 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD---RGAIIQVGSALAYR---------- 149 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEeCChhhcc----------
Confidence 58999999999988778888999999999999999999999999999999865 58999999999876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc--CCcEEEEEcCCCCCCCChhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA--DDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~--~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.+... .|++||+|+.+|+++++.|+.. .+|+|++|+||.++|++....
T Consensus 150 ------------~~~~~~-----------------~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~ 200 (334)
T PRK07109 150 ------------SIPLQS-----------------AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWA 200 (334)
T ss_pred ------------CCCcch-----------------HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhh
Confidence 666666 9999999999999999999975 469999999999999976532
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
...... ...+.+++..|++++..+++++..+ ....++.+....++.+.
T Consensus 201 ~~~~~~----------------------~~~~~~~~~~pe~vA~~i~~~~~~~--~~~~~vg~~~~~~~~~~ 248 (334)
T PRK07109 201 RSRLPV----------------------EPQPVPPIYQPEVVADAILYAAEHP--RRELWVGGPAKAAILGN 248 (334)
T ss_pred hhhccc----------------------cccCCCCCCCHHHHHHHHHHHHhCC--CcEEEeCcHHHHHHHHH
Confidence 110000 0112345566777777777776221 23446777888888664
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=259.04 Aligned_cols=239 Identities=28% Similarity=0.364 Sum_probs=201.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--- 109 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--- 109 (366)
|++++++++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++++|+++.++++++++..
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-GTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999998888877777654 567889999999999998887763
Q ss_pred -CCCcEEEEcCCCCCCCCc---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccc
Q 017757 110 -GPVDVLVVNQGVFVPGEL---------EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179 (366)
Q Consensus 110 -~~id~vi~nAG~~~~~~~---------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~ 179 (366)
+++|++|||||....... .+.+.++++.++++|+.+++.+++.+.|.|.++.. .++|+++||... .
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~--~~~iv~~ss~~~-~- 155 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS--KGVIINISSIAR-A- 155 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CeEEEEEccccc-c-
Confidence 789999999997553221 56788999999999999999999999999987542 478999998643 2
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.+... .|++||+|+++++++++.++.++||++++|+||.++
T Consensus 156 ---------------------~~~~~~-----------------~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~ 197 (253)
T PRK08217 156 ---------------------GNMGQT-----------------NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIE 197 (253)
T ss_pred ---------------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCc
Confidence 444455 899999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 260 TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 260 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
|++.... . ++..+.+....+.+++..++|+++.+.||+ + +.+++|+++.+|||++
T Consensus 198 t~~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~----~--~~~~~g~~~~~~gg~~ 252 (253)
T PRK08217 198 TEMTAAM------------------K-PEALERLEKMIPVGRLGEPEEIAHTVRFII----E--NDYVTGRVLEIDGGLR 252 (253)
T ss_pred Ccccccc------------------C-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHH----c--CCCcCCcEEEeCCCcc
Confidence 9976431 1 233445556678888999999999999998 4 3588999999999974
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=260.10 Aligned_cols=248 Identities=20% Similarity=0.264 Sum_probs=208.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++|+++||||+++||++++++|+++|++ |++++|+.++.++..+++... +.++.++.+|+++++++.++++.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-GAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999 999999988777777666433 66788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||......+.+.+.++++.++++|+.+++.+++++++.|.+++. .+++|++||..+..
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~g~iv~~ss~~~~~---------- 149 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA--EGTIVNIGSMSAHG---------- 149 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CCEEEEECCccccc----------
Confidence 478999999999887777788899999999999999999999999999987542 47999999988765
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+++|+++++++++++.|+.+.||+|++|+||++.|++......
T Consensus 150 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~ 200 (260)
T PRK06198 150 ------------GQPFLA-----------------AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQR 200 (260)
T ss_pred ------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhh
Confidence 555666 899999999999999999999999999999999999997533211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... ...+...+......+.++...++|++..+.+|+ ++.+.+++|+.+.+|||..
T Consensus 201 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~----~~~~~~~~G~~~~~~~~~~ 255 (260)
T PRK06198 201 EFH------------GAPDDWLEKAAATQPFGRLLDPDEVARAVAFLL----SDESGLMTGSVIDFDQSVW 255 (260)
T ss_pred hcc------------CCChHHHHHHhccCCccCCcCHHHHHHHHHHHc----ChhhCCccCceEeECCccc
Confidence 100 011222333444556788999999999999999 8888999999999999853
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=294.21 Aligned_cols=262 Identities=24% Similarity=0.278 Sum_probs=216.3
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~ 106 (366)
+.+...++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+ .++..+++|++|++++++++
T Consensus 405 ~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~ 484 (676)
T TIGR02632 405 RMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF 484 (676)
T ss_pred cCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence 33455678999999999999999999999999999999999999888877777764433 46788999999999998887
Q ss_pred Hh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 107 DE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 107 ~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++ ++++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++. .++||++||..+..
T Consensus 485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~--~g~IV~iSS~~a~~---- 558 (676)
T TIGR02632 485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL--GGNIVFIASKNAVY---- 558 (676)
T ss_pred HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCEEEEEeChhhcC----
Confidence 65 589999999999877777888899999999999999999999999999987542 47999999988876
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC-
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP- 261 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~- 261 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||.|.|+
T Consensus 559 ------------------~~~~~~-----------------aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s 603 (676)
T TIGR02632 559 ------------------AGKNAS-----------------AYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGS 603 (676)
T ss_pred ------------------CCCCCH-----------------HHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCc
Confidence 666666 99999999999999999999999999999999999653
Q ss_pred -ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 262 -GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 262 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+........ ......+++++..+.+....+.++.+.++|++..+.||+ ++.+.++||+++.+|||+..
T Consensus 604 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~----s~~~~~~TG~~i~vDGG~~~ 672 (676)
T TIGR02632 604 GIWDGEWREE-------RAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLA----SSKSEKTTGCIITVDGGVPA 672 (676)
T ss_pred ccccccchhh-------hhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHh----CCcccCCcCcEEEECCCchh
Confidence 222110000 000112344555555666778899999999999999999 88889999999999999765
Q ss_pred H
Q 017757 341 F 341 (366)
Q Consensus 341 ~ 341 (366)
.
T Consensus 673 ~ 673 (676)
T TIGR02632 673 A 673 (676)
T ss_pred c
Confidence 3
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=259.56 Aligned_cols=247 Identities=28% Similarity=0.327 Sum_probs=193.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
+++|+++||||+||||++++++|+++|++|++++|+.+++++..+ ..+.++.+|++|++++++++++ ++
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-------LGVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-------CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999999999999999876654321 2477899999999999888765 47
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++ .++||++||..+..
T Consensus 74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~---~g~iv~isS~~~~~------------ 138 (273)
T PRK06182 74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR---SGRIINISSMGGKI------------ 138 (273)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC---CCEEEEEcchhhcC------------
Confidence 899999999998888888999999999999999999999999999998865 57999999988765
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.+... .|++||+|+++++++++.|+.++||+|++|+||+++|++........
T Consensus 139 ----------~~~~~~-----------------~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~ 191 (273)
T PRK06182 139 ----------YTPLGA-----------------WYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHL 191 (273)
T ss_pred ----------CCCCcc-----------------HhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhh
Confidence 555556 89999999999999999999999999999999999999754321110
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVV 334 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~ 334 (366)
... ..........+..++.+....+.++...|++++..+.+++.. ..+...|+.|.-..+
T Consensus 192 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~-~~~~~~~~~g~~~~~ 251 (273)
T PRK06182 192 LKT---SGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTA-RRPKTRYAVGFGAKP 251 (273)
T ss_pred ccc---ccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC-CCCCceeecCcchHH
Confidence 000 000000001122334455555678899999999999999821 114566776654443
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=257.83 Aligned_cols=236 Identities=26% Similarity=0.366 Sum_probs=202.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
|++|||||++|||++++++|+++|++|++++| +++..++..+++... +.++.++.+|++|++++++++++ ++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-GFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999988 555555555544432 45788999999999999888765 4789
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||...+..+.+.+.+++++.+++|+.+++.+++.++|.|++++ .++|+++||..+..
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~-------------- 142 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG---WGRIINISSVNGQK-------------- 142 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEEcchhhcC--------------
Confidence 9999999988777778889999999999999999999999999998765 57999999988765
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.++.. .|+++|+++..++++++.++.+.||++++|+||+++|++....
T Consensus 143 --------~~~~~~-----------------~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~------ 191 (242)
T TIGR01829 143 --------GQFGQT-----------------NYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAM------ 191 (242)
T ss_pred --------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc------
Confidence 555666 8999999999999999999999999999999999999975431
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++....+....+.++...|++++..+.||+ ++.+.+++|+.+.+|||++
T Consensus 192 ------------~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~----~~~~~~~~G~~~~~~gg~~ 241 (242)
T TIGR01829 192 ------------R-EDVLNSIVAQIPVGRLGRPEEIAAAVAFLA----SEEAGYITGATLSINGGLY 241 (242)
T ss_pred ------------c-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCccCCEEEecCCcc
Confidence 1 233344555678889999999999999999 8888899999999999964
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=259.67 Aligned_cols=240 Identities=26% Similarity=0.311 Sum_probs=205.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++... +.++.++.+|++|.+++++++++
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-GGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999987777776666543 44678899999999999887765
Q ss_pred cCCCcEEEEcCCCCC---CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 AGPVDVLVVNQGVFV---PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ~~~id~vi~nAG~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|+||||||... +..+.+.+.+++++++++|+.+++.++++++|.|.+.+ .++||++||..++.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~------- 150 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG---GGAIVNQSSTAAWL------- 150 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC---CcEEEEEecccccC-------
Confidence 478999999999864 34567789999999999999999999999999998765 57999999987543
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
... .|++||+|++++++++++++...||++++|+||.++|++...
T Consensus 151 ------------------~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 195 (250)
T PRK07774 151 ------------------YSN-----------------FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRT 195 (250)
T ss_pred ------------------Ccc-----------------ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccc
Confidence 234 899999999999999999999999999999999999997543
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..++...+.+.+..+.+++..++|+++.+.+++ ++...+.+|+++.+|+|.+.
T Consensus 196 ------------------~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~----~~~~~~~~g~~~~v~~g~~~ 248 (250)
T PRK07774 196 ------------------VTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLL----SDEASWITGQIFNVDGGQII 248 (250)
T ss_pred ------------------cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----ChhhhCcCCCEEEECCCeec
Confidence 134556677777788888899999999999998 77667789999999998653
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=249.19 Aligned_cols=220 Identities=24% Similarity=0.335 Sum_probs=183.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
|+++||++++||+.||||++++++|+++|..+.+++.+.++.+ ...++++.. ...+.|++||+++..++++.+++
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999888888877754 445555543 56899999999999998888776
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++.+|++||+||+. +.++|++++++|+.|..+-+...+|+|.+++.+.+|-||++||++|..
T Consensus 80 ~fg~iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~--------- 142 (261)
T KOG4169|consen 80 TFGTIDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD--------- 142 (261)
T ss_pred HhCceEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC---------
Confidence 69999999999986 577899999999999999999999999999988899999999999998
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhH--hccCCcEEEEEcCCCCCCCChhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQE--VIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e--~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.|..+ .|++||+++.+|+||+|.. |.+.||++++||||++.|.+.+.
T Consensus 143 -------------P~p~~p-----------------VY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~ 192 (261)
T KOG4169|consen 143 -------------PMPVFP-----------------VYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAEN 192 (261)
T ss_pred -------------ccccch-----------------hhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHH
Confidence 888888 9999999999999999886 45779999999999999999888
Q ss_pred hhhcC-----CcchhhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 266 ENKRR-----PRLTSIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 266 ~~~~~-----~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
..... .+..+-.....+-.+|+.+++.++++++..
T Consensus 193 ~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~ 232 (261)
T KOG4169|consen 193 IDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYP 232 (261)
T ss_pred HHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhc
Confidence 64321 111111112223567777777777776553
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=253.03 Aligned_cols=223 Identities=28% Similarity=0.387 Sum_probs=189.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id 113 (366)
++++||||+||||++++++|+++|++|++++|+.+++++..+++... +.++.++++|+++++++++++++ ++++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-GGDGFYQRCDVRDYSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999999999998888888777654 56788999999999999888765 47899
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
++|||||......+.+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+..
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~--------------- 141 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK---SGRIVNIASMAGLM--------------- 141 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC---CCEEEEECChhhcC---------------
Confidence 999999998888888899999999999999999999999999998865 57999999998876
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
+.++.. .|+++|+|+.+++++++.|+.+.||+|++|+||+++|++........+..
T Consensus 142 -------~~~~~~-----------------~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~ 197 (270)
T PRK05650 142 -------QGPAMS-----------------SYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAM 197 (270)
T ss_pred -------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhH
Confidence 666667 99999999999999999999999999999999999999876543222221
Q ss_pred hhhhhc--cCCCCCHHHHHHHHHhhhhCCCeE
Q 017757 274 TSIIAA--SSGAMKADEVAKKALDGIKSGSFI 303 (366)
Q Consensus 274 ~~~~~~--~~~~~~~~~~a~~~~~~i~~gr~~ 303 (366)
...... ....++++++++.+++.+..++..
T Consensus 198 ~~~~~~~~~~~~~~~~~vA~~i~~~l~~~~~~ 229 (270)
T PRK05650 198 KAQVGKLLEKSPITAADIADYIYQQVAKGEFL 229 (270)
T ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHhCCCEE
Confidence 111111 123578999999999888877643
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=258.08 Aligned_cols=244 Identities=26% Similarity=0.347 Sum_probs=197.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id 113 (366)
|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+..+.++.+|++|++++++++++ ++++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999999999999999999988888887777655344456789999999999887765 57899
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
++|||||......+.+.+.+++++.+++|+.+++.++++++|.|.+++. .++||++||..+..
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~g~ii~isS~~~~~--------------- 143 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR--GGHLVNVSSAAGLV--------------- 143 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CcEEEEEccccccC---------------
Confidence 9999999887778889999999999999999999999999999976532 47999999988765
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
+.+... .|++||+|+.+++++++.|+.++||+|++|+||.++|++..+.......
T Consensus 144 -------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~- 198 (272)
T PRK07832 144 -------ALPWHA-----------------AYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVD- 198 (272)
T ss_pred -------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccC-
Confidence 666666 8999999999999999999999999999999999999987653110000
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.+.+.. +..... ..++..++++++..+++++ . +..+++++.+.+++|+..
T Consensus 199 ----------~~~~~~-~~~~~~-~~~~~~~~~~vA~~~~~~~----~-~~~~~~~~~~~~~~~~~~ 248 (272)
T PRK07832 199 ----------REDPRV-QKWVDR-FRGHAVTPEKAAEKILAGV----E-KNRYLVYTSPDIRALYWF 248 (272)
T ss_pred ----------cchhhH-HHHHHh-cccCCCCHHHHHHHHHHHH----h-cCCeEEecCcchHHHHHH
Confidence 001111 111111 2456778888888888887 3 567888898899999653
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=258.06 Aligned_cols=236 Identities=25% Similarity=0.299 Sum_probs=200.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
|+++||||+++||+++|++|+++|++|++++|+.. ..++..+.... .+.++.++.+|+++.+++++++++ ++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999854 22222222221 245788999999999998888765 5789
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||......+.+.+.+++++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~iss~~~~~-------------- 144 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG---YGRIINISSVNGLK-------------- 144 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC---CeEEEEECChhhcc--------------
Confidence 9999999988777788889999999999999999999999999998765 67999999988776
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.++.. .|+++|+|++++++.++.++.+.||++++|+||.++|++.+..
T Consensus 145 --------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~------ 193 (245)
T PRK12824 145 --------GQFGQT-----------------NYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM------ 193 (245)
T ss_pred --------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc------
Confidence 556666 8999999999999999999999999999999999999975432
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++..+.+....+.++...++|++..+.||+ ++.+.+++|+.+.+|||..
T Consensus 194 -------------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK12824 194 -------------GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLV----SEAAGFITGETISINGGLY 243 (245)
T ss_pred -------------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CccccCccCcEEEECCCee
Confidence 1233445555667888999999999999999 8888899999999999963
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=254.08 Aligned_cols=215 Identities=28% Similarity=0.335 Sum_probs=186.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++++++||||+||||++++++|+++|++|++++|+.+++++..+++. ++.++.+|++|++++++++++
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVEAD 75 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999888777665543 577899999999998887765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||......+.+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+..
T Consensus 76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 142 (273)
T PRK07825 76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG---RGHVVNVASLAGKI---------- 142 (273)
T ss_pred cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCEEEEEcCccccC----------
Confidence 47899999999998878888899999999999999999999999999999876 67999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+++.+++++++.|+.+.||+|++|+||+++|++......
T Consensus 143 ------------~~~~~~-----------------~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~ 193 (273)
T PRK07825 143 ------------PVPGMA-----------------TYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG 193 (273)
T ss_pred ------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc
Confidence 667777 999999999999999999999999999999999999998654311
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeE
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFI 303 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~ 303 (366)
. .....++++++++.++..+..++..
T Consensus 194 ~---------~~~~~~~~~~va~~~~~~l~~~~~~ 219 (273)
T PRK07825 194 A---------KGFKNVEPEDVAAAIVGTVAKPRPE 219 (273)
T ss_pred c---------cCCCCCCHHHHHHHHHHHHhCCCCE
Confidence 1 1123578999999999988776543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=258.87 Aligned_cols=239 Identities=24% Similarity=0.305 Sum_probs=200.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--- 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--- 109 (366)
++++++++||||+||||+++|++|+++|++|++. .|+.+++++..+++... +.++.++++|++|++++.+++++.
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~i~~~~~~~~~~ 81 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-GGKAFLIEADLNSIDGVKKLVEQLKNE 81 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998774 78877776666665432 457889999999999999888763
Q ss_pred -------CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 110 -------GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 110 -------~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
+++|++|||||......+.+.+.+.++.++++|+.+++++++.+++.|++ .+++|++||..+..
T Consensus 82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~v~~sS~~~~~---- 152 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-----EGRVINISSAEVRL---- 152 (254)
T ss_pred hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-----CCEEEEECCHHhcC----
Confidence 47999999999887777888899999999999999999999999999865 46999999987765
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+++++++++.++.++|++|++|+||+++|++
T Consensus 153 ------------------~~~~~~-----------------~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 153 ------------------GFTGSI-----------------AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred ------------------CCCCCc-----------------chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 555666 899999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
...... .++..+........++...++|++..+.+++ ++.+.+++|+.+.++||+
T Consensus 198 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~g~~~~i~~~~ 252 (254)
T PRK12746 198 NAKLLD-----------------DPEIRNFATNSSVFGRIGQVEDIADAVAFLA----SSDSRWVTGQIIDVSGGF 252 (254)
T ss_pred hhhhcc-----------------ChhHHHHHHhcCCcCCCCCHHHHHHHHHHHc----CcccCCcCCCEEEeCCCc
Confidence 654211 1222233334445678889999999999998 887889999999999984
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=255.43 Aligned_cols=228 Identities=21% Similarity=0.229 Sum_probs=189.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC--HHHHHHHHHh--
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD--FDAVKTALDE-- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~--~~~v~~~~~~-- 108 (366)
..+++|+++||||++|||++++++|+++|++|++++|+.+++++..+++....+.++.++.+|+++ .+++++++++
T Consensus 2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~ 81 (239)
T PRK08703 2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA 81 (239)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999888888777765544567788999986 4566665543
Q ss_pred --c-CCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 --A-GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 --~-~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
+ +++|++|||||.... .++.+.+.+++++++++|+.++++++++++|.|.+.+ .++++++||..+..
T Consensus 82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---~~~iv~~ss~~~~~------ 152 (239)
T PRK08703 82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP---DASVIFVGESHGET------ 152 (239)
T ss_pred HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC---CCEEEEEecccccc------
Confidence 4 789999999997543 5677889999999999999999999999999998765 57999999988765
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccC-CcEEEEEcCCCCCCCCh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD-DIHVSLIFPPDTETPGL 263 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~-gI~Vn~V~PG~v~T~~~ 263 (366)
+.+... .|++||+|++.++++++.|+.++ +|+||+|+||+|+|++.
T Consensus 153 ----------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~ 199 (239)
T PRK08703 153 ----------------PKAYWG-----------------GFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR 199 (239)
T ss_pred ----------------CCCCcc-----------------chHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence 555566 89999999999999999999887 69999999999999975
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
....... . ..+...++|++..+.|++ ++++.++||++|.
T Consensus 200 ~~~~~~~--------------~-------------~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~ 238 (239)
T PRK08703 200 IKSHPGE--------------A-------------KSERKSYGDVLPAFVWWA----SAESKGRSGEIVY 238 (239)
T ss_pred cccCCCC--------------C-------------ccccCCHHHHHHHHHHHh----CccccCcCCeEee
Confidence 4321100 0 012347888899999999 9999999999875
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=249.84 Aligned_cols=213 Identities=31% Similarity=0.374 Sum_probs=181.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
+|+++||||++|||++++++|+++|++|++++|+.+++++..+++... + ++.++.+|++|++++++++++ ++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA-A-RVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC-C-eeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 478999999999999999999999999999999988877776666432 2 788999999999999888765 5789
Q ss_pred cEEEEcCCCCCCCCcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 113 DVLVVNQGVFVPGELE-VQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
|++|||||........ +.+.+++++++++|+.|++++++.++|.|++++ .++||++||.++..
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~---~~~iv~isS~~~~~------------- 143 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR---RGTLVGIASVAGVR------------- 143 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC---CCEEEEEechhhcC-------------
Confidence 9999999986544333 378899999999999999999999999998765 58999999998876
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.+... .|++||++++.++++++.|+.++||+|++|+||+++|++........
T Consensus 144 ---------~~~~~~-----------------~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~- 196 (257)
T PRK07024 144 ---------GLPGAG-----------------AYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYPM- 196 (257)
T ss_pred ---------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCCC-
Confidence 666666 89999999999999999999999999999999999999765321110
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeE
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFI 303 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~ 303 (366)
...++|+++++.+++.+..++..
T Consensus 197 ---------~~~~~~~~~a~~~~~~l~~~~~~ 219 (257)
T PRK07024 197 ---------PFLMDADRFAARAARAIARGRRF 219 (257)
T ss_pred ---------CCccCHHHHHHHHHHHHhCCCcE
Confidence 11368999999999999888654
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=253.96 Aligned_cols=181 Identities=27% Similarity=0.355 Sum_probs=162.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-----C
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-----G 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-----~ 110 (366)
.+|+++||||+||||+++|++|+++|++|++++|+.+.++++.+ ..+.++.+|++|.+++++++++. +
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g 75 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-------EGLEAFQLDYAEPESIAALVAQVLELSGG 75 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999999877654432 24678899999999999888763 6
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||......+.+.+.++++.++++|+.|++.+++.++|.|++++ .++||++||.++..
T Consensus 76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~---~g~iv~isS~~~~~------------ 140 (277)
T PRK05993 76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG---QGRIVQCSSILGLV------------ 140 (277)
T ss_pred CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC---CCEEEEECChhhcC------------
Confidence 899999999998888888999999999999999999999999999998875 57999999998876
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.+... .|++||+|+++++++++.|+.++||+|++|+||+++|++..+
T Consensus 141 ----------~~~~~~-----------------~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~ 188 (277)
T PRK05993 141 ----------PMKYRG-----------------AYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN 188 (277)
T ss_pred ----------CCCccc-----------------hHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence 666666 999999999999999999999999999999999999998764
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=249.72 Aligned_cols=219 Identities=23% Similarity=0.267 Sum_probs=182.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchh-HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---C
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA---G 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~---~ 110 (366)
++|+++||||++|||+++|++|+++| ++|++++|+.++ ++++.+++....+.++.++++|++|++++++++++. +
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 57899999999999999999999995 899999999886 788888877654457899999999999988777653 6
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||+|...+..-...+.++..+++++|+.+++.+++.++|.|++++ .++||++||..+..
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~---~~~iv~isS~~g~~------------ 151 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG---FGQIIAMSSVAGER------------ 151 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC---CceEEEEechhhcC------------
Confidence 899999999986442222235666778999999999999999999999876 58999999998765
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.++.. .|++||+|+.+|+++++.|+.++||+|++|+||+++|++.......
T Consensus 152 ----------~~~~~~-----------------~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~- 203 (253)
T PRK07904 152 ----------VRRSNF-----------------VYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA- 203 (253)
T ss_pred ----------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC-
Confidence 444555 8999999999999999999999999999999999999977542211
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCC
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCN 307 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~ 307 (366)
...++|+++|+.+++.+..++......
T Consensus 204 ----------~~~~~~~~~A~~i~~~~~~~~~~~~~~ 230 (253)
T PRK07904 204 ----------PLTVDKEDVAKLAVTAVAKGKELVWAP 230 (253)
T ss_pred ----------CCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 124699999999999998887654443
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=276.44 Aligned_cols=232 Identities=25% Similarity=0.270 Sum_probs=191.5
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.....++++++|||||++|||+++|++|+++|++|++++|+.++++++.++++.. +.++.++++|++|++++++++++
T Consensus 308 ~~~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~ 386 (582)
T PRK05855 308 RPRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA-GAVAHAYRVDVSDADAMEAFAEWV 386 (582)
T ss_pred cccccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4445678999999999999999999999999999999999998888888777654 55789999999999999888876
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||......+.+.+.+++++++++|+.|+++++++++|.|++++. .|+||++||.++..
T Consensus 387 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~------- 457 (582)
T PRK05855 387 RAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT--GGHIVNVASAAAYA------- 457 (582)
T ss_pred HHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CcEEEEECChhhcc-------
Confidence 578999999999988888889999999999999999999999999999988642 47999999999887
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+++++++++.|++++||+|++|+||+|+|++.+.
T Consensus 458 ---------------~~~~~~-----------------~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 505 (582)
T PRK05855 458 ---------------PSRSLP-----------------AYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVAT 505 (582)
T ss_pred ---------------CCCCCc-----------------HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhc
Confidence 666777 999999999999999999999999999999999999998765
Q ss_pred hhhcCCc------chhhh--hccCCCCCHHHHHHHHHhhhhCCCeE
Q 017757 266 ENKRRPR------LTSII--AASSGAMKADEVAKKALDGIKSGSFI 303 (366)
Q Consensus 266 ~~~~~~~------~~~~~--~~~~~~~~~~~~a~~~~~~i~~gr~~ 303 (366)
....... ..... .......+||++++.++..+..++..
T Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~~~ 551 (582)
T PRK05855 506 TRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNKAV 551 (582)
T ss_pred cccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCCCE
Confidence 3211000 00000 00112346777777777777666543
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=253.08 Aligned_cols=241 Identities=27% Similarity=0.340 Sum_probs=206.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+++++|+++||||+++||++++++|+++|++|+++ +|+.++.++..+.+... +.++.++.+|++|++++++++++
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-GGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998 99988877777766543 56789999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||+|......+.+.+.+++++++++|+.+++.+++.+.+.+.+++ .+++|++||..+..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~~v~~sS~~~~~--------- 147 (247)
T PRK05565 80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK---SGVIVNISSIWGLI--------- 147 (247)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEECCHhhcc---------
Confidence 46899999999988667777889999999999999999999999999998765 57999999988776
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+... .|+++|+++..++++++.++...||++++|+||+++|++.+...
T Consensus 148 -------------~~~~~~-----------------~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~ 197 (247)
T PRK05565 148 -------------GASCEV-----------------LYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS 197 (247)
T ss_pred -------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC
Confidence 555666 89999999999999999999999999999999999998765421
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+. ....+....+.+++..+++++..+.+|+ ++.+..++|+.+.+|+|++
T Consensus 198 ------------------~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~~~~~~~~~ 246 (247)
T PRK05565 198 ------------------EE-DKEGLAEEIPLGRLGKPEEIAKVVLFLA----SDDASYITGQIITVDGGWT 246 (247)
T ss_pred ------------------hH-HHHHHHhcCCCCCCCCHHHHHHHHHHHc----CCccCCccCcEEEecCCcc
Confidence 11 1222233456678889999999999999 8999999999999999964
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=253.36 Aligned_cols=237 Identities=19% Similarity=0.190 Sum_probs=195.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.++..+|+++||||++|||++++++|+++|++|+++++ +.+.++++.+++... +.++.++.+|++|.+++++++++
T Consensus 4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~ 82 (258)
T PRK09134 4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-GRRAVALQADLADEAEVRALVARAS 82 (258)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 44567899999999999999999999999999988766 445566666666443 56788999999999999988876
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||...+.++.+.+.+++++++++|+.+++++++++.+.++++. .++|++++|..+..
T Consensus 83 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~~s~~~~~-------- 151 (258)
T PRK09134 83 AALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA---RGLVVNMIDQRVWN-------- 151 (258)
T ss_pred HHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CceEEEECchhhcC--------
Confidence 47899999999988777788889999999999999999999999999998754 57999999876654
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.|... .|++||+|+++++++++.++.+. |+||+|+||++.|+...
T Consensus 152 --------------~~p~~~-----------------~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~-- 197 (258)
T PRK09134 152 --------------LNPDFL-----------------SYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQ-- 197 (258)
T ss_pred --------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCccc--
Confidence 445555 89999999999999999999875 99999999999886311
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++... ......+.++...++|++..+++++ + ..+++|+.+.+|||..
T Consensus 198 ------------------~~~~~~-~~~~~~~~~~~~~~~d~a~~~~~~~----~--~~~~~g~~~~i~gg~~ 245 (258)
T PRK09134 198 ------------------SPEDFA-RQHAATPLGRGSTPEEIAAAVRYLL----D--APSVTGQMIAVDGGQH 245 (258)
T ss_pred ------------------ChHHHH-HHHhcCCCCCCcCHHHHHHHHHHHh----c--CCCcCCCEEEECCCee
Confidence 112222 2334456778889999999999998 4 3568999999999963
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=254.85 Aligned_cols=240 Identities=24% Similarity=0.280 Sum_probs=202.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
+|+++||||+++||++++++|+++|++|++++|+.++.++..+++. +.++..+++|++|.+++.+++++ ++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999999999999999888777766653 45788999999999999877765 4789
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||+|...+..+.+.+++++++.+++|+.+++.+++++.+.+++++ .++|+++||..+..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~-------------- 141 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS---RGAVVNIGSVNGMA-------------- 141 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CeEEEEEcchhhcC--------------
Confidence 9999999987777777889999999999999999999999999998765 57999999976542
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
. .+.. .|+++|+|++.++++++.++.++||+||+++||+++|++......
T Consensus 142 --------~-~~~~-----------------~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~---- 191 (257)
T PRK07074 142 --------A-LGHP-----------------AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA---- 191 (257)
T ss_pred --------C-CCCc-----------------ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc----
Confidence 1 2334 799999999999999999999999999999999999987543111
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFV 342 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~ 342 (366)
...+..+......+.+++..++|++..+.+|+ ++.+.+++|+.+.+|||+...+
T Consensus 192 ------------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~----~~~~~~~~g~~~~~~~g~~~~~ 245 (257)
T PRK07074 192 ------------ANPQVFEELKKWYPLQDFATPDDVANAVLFLA----SPAARAITGVCLPVDGGLTAGN 245 (257)
T ss_pred ------------cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CchhcCcCCcEEEeCCCcCcCC
Confidence 11233333444556788999999999999999 8888999999999999987543
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=251.16 Aligned_cols=230 Identities=25% Similarity=0.300 Sum_probs=193.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---CC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA---GP 111 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~---~~ 111 (366)
+++|+++||||+++||++++++|+++|++|++++|+.+.. . ...++.+|++|.+++++++++. .+
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~------~~~~~~~D~~~~~~~~~~~~~~~~~~~ 68 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F------PGELFACDLADIEQTAATLAQINEIHP 68 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c------CceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 3689999999999999999999999999999999987541 0 1246889999999998887753 36
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||...+.++.+.+.+++++.+++|+.+++.+.++++|.|++++ .++||++||... .
T Consensus 69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~-~------------- 131 (234)
T PRK07577 69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE---QGRIVNICSRAI-F------------- 131 (234)
T ss_pred CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEEccccc-c-------------
Confidence 89999999998777888889999999999999999999999999998765 579999999753 2
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.+... .|++||+++++++++++.|++++||+|++|+||+++|++.......
T Consensus 132 ---------~~~~~~-----------------~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~-- 183 (234)
T PRK07577 132 ---------GALDRT-----------------SYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPV-- 183 (234)
T ss_pred ---------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccccccc--
Confidence 344455 8999999999999999999999999999999999999986542110
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++..+.+....+.++...++|++..+.+|+ ++...+++|+.+.+|||.+
T Consensus 184 --------------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~----~~~~~~~~g~~~~~~g~~~ 233 (234)
T PRK07577 184 --------------GSEEEKRVLASIPMRRLGTPEEVAAAIAFLL----SDDAGFITGQVLGVDGGGS 233 (234)
T ss_pred --------------chhHHHHHhhcCCCCCCcCHHHHHHHHHHHh----CcccCCccceEEEecCCcc
Confidence 1223344555678888889999999999999 8888899999999999853
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=251.90 Aligned_cols=228 Identities=26% Similarity=0.320 Sum_probs=192.4
Q ss_pred EEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 41 LITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
+||||++|||++++++|+++|++|++++|+.+++++..++++. +.++.++.+|++|++++++++++.+++|++|||+|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--GAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 6999999999999999999999999999998877776666642 56788999999999999999999999999999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCC
Q 017757 121 VFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGK 200 (366)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (366)
.....++.+.+.+++++++++|+.+++++++ .+.+.+ .++||++||.++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~-----~g~iv~~ss~~~~~---------------------- 129 (230)
T PRK07041 79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP-----GGSLTFVSGFAAVR---------------------- 129 (230)
T ss_pred CCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC-----CeEEEEECchhhcC----------------------
Confidence 9877778888999999999999999999999 444432 57999999998876
Q ss_pred CCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhcc
Q 017757 201 GHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAAS 280 (366)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~ 280 (366)
+.+... .|++||+++++++++++.|+.+ ||||+|+||+++|++.......
T Consensus 130 ~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~----------- 179 (230)
T PRK07041 130 PSASGV-----------------LQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGD----------- 179 (230)
T ss_pred CCCcch-----------------HHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhcc-----------
Confidence 666666 8999999999999999999975 9999999999999976532110
Q ss_pred CCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 281 SGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 281 ~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..+...+.....++.+++..++|++..+.||+ +. .+++|+.+.+|||..
T Consensus 180 ----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~--~~~~G~~~~v~gg~~ 228 (230)
T PRK07041 180 ----AREAMFAAAAERLPARRVGQPEDVANAILFLA----AN--GFTTGSTVLVDGGHA 228 (230)
T ss_pred ----chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----cC--CCcCCcEEEeCCCee
Confidence 11223334455667788899999999999999 53 589999999999954
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=253.78 Aligned_cols=240 Identities=24% Similarity=0.271 Sum_probs=197.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
+|+++||||+++||++++++|+++|++|++++|+. +..++..+.++.. +.++.++.+|+++++++.+++++ +++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-GVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999999999999864 3444455555432 45789999999999999888776 478
Q ss_pred CcEEEEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC---CcEEEEecCCccccccccccCc
Q 017757 112 VDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGG---PASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 112 id~vi~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~---~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
+|++|||||...+ .++.+.+++++++++++|+.+++.+++++.+.|+++..+. .++|+++||..+..
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------- 152 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM-------- 152 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--------
Confidence 9999999998643 4677889999999999999999999999999999765422 46899999988876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.+... .|++||+++++++++++.|+.++||+|++|+||+++|++....
T Consensus 153 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~ 201 (256)
T PRK12745 153 --------------VSPNRG-----------------EYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV 201 (256)
T ss_pred --------------CCCCCc-----------------ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc
Confidence 555566 8999999999999999999999999999999999999875432
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHH-hhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKAL-DGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++..+... ...+.+++..++|++..+.+++ ++...+++|+.+.+|||.+
T Consensus 202 ~-------------------~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~----~~~~~~~~G~~~~i~gg~~ 252 (256)
T PRK12745 202 T-------------------AKYDALIAKGLVPMPRWGEPEDVARAVAALA----SGDLPYSTGQAIHVDGGLS 252 (256)
T ss_pred c-------------------hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHh----CCcccccCCCEEEECCCee
Confidence 1 11111111 1346678889999999999999 8888899999999999965
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=252.51 Aligned_cols=225 Identities=29% Similarity=0.363 Sum_probs=187.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
.+|+++||||+||||++++++|+++|++|++++|+.+.+++..+.+ +.++..+++|++|++++++++++ +++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GDRLLPLALDVTDRAAVFAAVETAVEHFGR 77 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----cCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999999988776654433 44678899999999999888765 478
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||.++..
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~vsS~~~~~------------- 141 (275)
T PRK08263 78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR---SGHIIQISSIGGIS------------- 141 (275)
T ss_pred CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CCEEEEEcChhhcC-------------
Confidence 99999999998888888999999999999999999999999999998865 57999999998876
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.+... .|++||+++.+++++++.|+.+.||+|++|+||.++|++.........
T Consensus 142 ---------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~ 195 (275)
T PRK08263 142 ---------AFPMSG-----------------IYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRAT 195 (275)
T ss_pred ---------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCC
Confidence 666666 899999999999999999999999999999999999998752111000
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCe-EeeCCchhHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSF-IVPCNSEGFLLSIA 316 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~-~~~~~v~~~~~~L~ 316 (366)
.. ...++..+.+.+..+.+++ +.|+|++..+++++
T Consensus 196 ~~----------~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~ 231 (275)
T PRK08263 196 PL----------DAYDTLREELAEQWSERSVDGDPEAAAEALLKLV 231 (275)
T ss_pred Cc----------hhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 00 0112333445555677777 89999999999998
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=250.04 Aligned_cols=237 Identities=32% Similarity=0.452 Sum_probs=198.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC----chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS----GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~----~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
++++++++||||++|||+++|++|+++|++|++++|. .+..++..+++... +.++.++.+|+++.+++++++++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-GGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4678999999999999999999999999999997663 34444444444432 56788999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL-PLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~-~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|++|||||...+.++.+.+.+++++++++|+.+++.+++++. +.+++++ .+++|++||..+..
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~iv~~sS~~~~~------ 152 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR---GGRIVNIASVAGVR------ 152 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC---CeEEEEECCchhcC------
Confidence 4789999999999887888888999999999999999999999999 5665544 57999999988876
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|+++|++++.++++++.++.+.||++++|+||+++|++..
T Consensus 153 ----------------~~~~~~-----------------~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~ 199 (249)
T PRK12827 153 ----------------GNRGQV-----------------NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMAD 199 (249)
T ss_pred ----------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccc
Confidence 555666 89999999999999999999999999999999999999754
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
... ..+.+.+..+.++...+++++..+.+|+ ++.+.+++|+.+.+|||+
T Consensus 200 ~~~---------------------~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 200 NAA---------------------PTEHLLNPVPVQRLGEPDEVAALVAFLV----SDAASYVTGQVIPVDGGF 248 (249)
T ss_pred ccc---------------------hHHHHHhhCCCcCCcCHHHHHHHHHHHc----CcccCCccCcEEEeCCCC
Confidence 321 1133445556677778999999999999 888899999999999985
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=247.97 Aligned_cols=242 Identities=28% Similarity=0.359 Sum_probs=204.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+.+++|+++||||+|+||++++++|+++|++|+++.|+.. ..++..+++... +.++..+.+|+++.+++.+++++
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-GGKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988888765 344555555433 56788999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||........+.+.+++++++++|+.+++.+.+.+.+.+.+.+ .++++++||..+..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~~v~iss~~~~~--------- 147 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR---SGRIINISSVVGLM--------- 147 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CeEEEEEcccccCc---------
Confidence 46899999999988777777889999999999999999999999999998755 57999999987765
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+... .|+++|++++++++.++.++.+.||++++|+||+++|++.+..
T Consensus 148 -------------~~~~~~-----------------~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~- 196 (248)
T PRK05557 148 -------------GNPGQA-----------------NYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL- 196 (248)
T ss_pred -------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc-
Confidence 555566 8999999999999999999999999999999999999875432
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.++..+......+.+++..++|++..+.+|+ .+.+.+++|+.+.+|||+++
T Consensus 197 ------------------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~----~~~~~~~~g~~~~i~~~~~~ 247 (248)
T PRK05557 197 ------------------PEDVKEAILAQIPLGRLGQPEEIASAVAFLA----SDEAAYITGQTLHVNGGMVM 247 (248)
T ss_pred ------------------ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CcccCCccccEEEecCCccC
Confidence 1233345555667788899999999999998 77888999999999999764
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=272.72 Aligned_cols=237 Identities=22% Similarity=0.250 Sum_probs=195.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
...++||+++||||++|||++++++|+++|++|++++|.. +.+++..+++ ....+.+|++|+++++++++.
T Consensus 205 ~~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~ 278 (450)
T PRK08261 205 DRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV------GGTALALDITAPDAPARIAEHL 278 (450)
T ss_pred ccCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc------CCeEEEEeCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999853 2233332222 235788999999999988775
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||+.....+.+.+.++|+.++++|+.+++++++.+.+.+..++ .++||++||.++..
T Consensus 279 ~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---~g~iv~~SS~~~~~------- 348 (450)
T PRK08261 279 AERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD---GGRIVGVSSISGIA------- 348 (450)
T ss_pred HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC---CCEEEEECChhhcC-------
Confidence 46899999999998878888899999999999999999999999999655433 57999999998876
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|+++|+++++|+++++.|+.++||++|+|+||+++|++...
T Consensus 349 ---------------g~~~~~-----------------~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~ 396 (450)
T PRK08261 349 ---------------GNRGQT-----------------NYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA 396 (450)
T ss_pred ---------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc
Confidence 666666 999999999999999999999999999999999999987643
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... ..++..+. ..+.++.+.|+|++..+.||+ ++.+.++||+++.+|||-.
T Consensus 397 ~~~----------------~~~~~~~~---~~~l~~~~~p~dva~~~~~l~----s~~~~~itG~~i~v~g~~~ 447 (450)
T PRK08261 397 IPF----------------ATREAGRR---MNSLQQGGLPVDVAETIAWLA----SPASGGVTGNVVRVCGQSL 447 (450)
T ss_pred cch----------------hHHHHHhh---cCCcCCCCCHHHHHHHHHHHh----ChhhcCCCCCEEEECCCcc
Confidence 210 11222222 234567788999999999999 9999999999999999743
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=247.42 Aligned_cols=233 Identities=26% Similarity=0.360 Sum_probs=186.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
|++|++|||||+|+||++++++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|++++++ +++ +
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 468999999999999999999999999999999999888877766665432 3578899999999999887 544 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||...+..+.+.+.+++++.+++|+.+++.+++.++|+|++.+ .++||++||..+..
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~vsS~~~~~----------- 145 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK---SGKIINISSISGRV----------- 145 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CCEEEEECcccccC-----------
Confidence 8899999999988887788889999999999999999999999999998765 57999999988776
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+++++++++++.|++++||+|++|+||+++|++.......
T Consensus 146 -----------~~~~~~-----------------~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~ 197 (280)
T PRK06914 146 -----------GFPGLS-----------------PYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQL 197 (280)
T ss_pred -----------CCCCCc-----------------hhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccc
Confidence 556666 8999999999999999999999999999999999999976542211
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhh--hhCCCeEeeCCchhHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDG--IKSGSFIVPCNSEGFLLSIA 316 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~--i~~gr~~~~~~v~~~~~~L~ 316 (366)
.... .. .........+.+... .+.+++..++|++..+.+++
T Consensus 198 ~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~ 240 (280)
T PRK06914 198 AENQ-----SE-TTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIA 240 (280)
T ss_pred cccc-----cc-cccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHH
Confidence 0000 00 000111222222222 24567889999999999998
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-32 Score=247.36 Aligned_cols=241 Identities=30% Similarity=0.409 Sum_probs=205.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|+++||||+++||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|++++++++++ +
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA-GGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999988777777766543 45688999999999999988865 4
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc-cccccccCccC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ-CWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~ 188 (366)
+++|++|||+|...+.++.+.+.+++++.+++|+.+++.+++.++|.|.+++ .+++|++||..+. .
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~ii~~ss~~~~~~---------- 148 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG---GGRIVLTSSVAGPRV---------- 148 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CcEEEEEechHhhcc----------
Confidence 6899999999988777777889999999999999999999999999998765 6799999998776 3
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+++|++++++++.++.++.+.|+++++|+||.++|+.......
T Consensus 149 ------------~~~~~~-----------------~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~ 199 (251)
T PRK12826 149 ------------GYPGLA-----------------HYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD 199 (251)
T ss_pred ------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc
Confidence 445555 899999999999999999999999999999999999997654211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
......+....+.+++..++|++..+.+|+ ++...+++|+.+.+|||.+
T Consensus 200 ------------------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~g~~~~~~~g~~ 248 (251)
T PRK12826 200 ------------------AQWAEAIAAAIPLGRLGEPEDIAAAVLFLA----SDEARYITGQTLPVDGGAT 248 (251)
T ss_pred ------------------hHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCcCCcEEEECCCcc
Confidence 111233444556678889999999999998 8778889999999999965
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=246.36 Aligned_cols=238 Identities=24% Similarity=0.273 Sum_probs=198.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
|+++||||+|+||++++++|+++|++|++ ..|+.++.++...++... +.++..+++|++|++++++++++ ++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-GGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-CCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 68999999999999999999999999976 467777777666666543 55788899999999999988876 5789
Q ss_pred cEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 113 DVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 113 d~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
|++|||||... ...+.+.+.++++.++++|+.+++.+++.+++.+.++..+..+++|++||..+..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~------------- 147 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRL------------- 147 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcc-------------
Confidence 99999999763 4567788999999999999999999999999999886544468999999987765
Q ss_pred cccccccCCCCCC-ccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 192 NKLCESSGKGHGG-YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 192 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.+. .. .|+++|++++++++.++.++.++||++++|+||.++|++....
T Consensus 148 ---------~~~~~~~-----------------~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~---- 197 (247)
T PRK09730 148 ---------GAPGEYV-----------------DYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG---- 197 (247)
T ss_pred ---------CCCCccc-----------------chHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC----
Confidence 4443 34 7999999999999999999999999999999999999964321
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
..++ .........+.++...++|++..+.|++ ++...+++|+.+.+|||
T Consensus 198 -------------~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~~~----~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 198 -------------GEPG-RVDRVKSNIPMQRGGQPEEVAQAIVWLL----SDKASYVTGSFIDLAGG 246 (247)
T ss_pred -------------CCHH-HHHHHHhcCCCCCCcCHHHHHHHHHhhc----ChhhcCccCcEEecCCC
Confidence 0112 2233445567778889999999999999 88888999999999987
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=238.08 Aligned_cols=239 Identities=26% Similarity=0.319 Sum_probs=209.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+.+|-+.+||||.+|+|++.|++|+++|++|++.+...++.++.++++ +.++.|.++|++++++++..+..
T Consensus 5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~~~vf~padvtsekdv~aala~ak~k 80 (260)
T KOG1199|consen 5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GGKVVFTPADVTSEKDVRAALAKAKAK 80 (260)
T ss_pred hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CCceEEeccccCcHHHHHHHHHHHHhh
Confidence 4678999999999999999999999999999999999988888888777 67899999999999999988754
Q ss_pred cCCCcEEEEcCCCCCCC------CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCCcEEEEecCCccccc
Q 017757 109 AGPVDVLVVNQGVFVPG------ELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQ---NGGPASIALMSSQAGQCW 179 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~---~~~~g~iv~vsS~~~~~~ 179 (366)
++++|.++||||+...- .-..-+.|+|++.+++|++|+|++++.....|-++. .+.+|.||++.|++++.
T Consensus 81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd- 159 (260)
T KOG1199|consen 81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD- 159 (260)
T ss_pred ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec-
Confidence 79999999999985331 222358899999999999999999999999987654 35678999999999987
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+..+.. +|++||+|+.+|+--++++++..|||++.|.||.++
T Consensus 160 ---------------------gq~gqa-----------------aysaskgaivgmtlpiardla~~gir~~tiapglf~ 201 (260)
T KOG1199|consen 160 ---------------------GQTGQA-----------------AYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFD 201 (260)
T ss_pred ---------------------Cccchh-----------------hhhcccCceEeeechhhhhcccCceEEEeecccccC
Confidence 777777 999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCC-CeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 260 TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG-SFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 260 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g-r~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
||++... ||.+...+.+.+|.. |++.|.|-++.+.-+. +..|++|++|.+||-.
T Consensus 202 tpllssl-------------------pekv~~fla~~ipfpsrlg~p~eyahlvqaii------enp~lngevir~dgal 256 (260)
T KOG1199|consen 202 TPLLSSL-------------------PEKVKSFLAQLIPFPSRLGHPHEYAHLVQAII------ENPYLNGEVIRFDGAL 256 (260)
T ss_pred Chhhhhh-------------------hHHHHHHHHHhCCCchhcCChHHHHHHHHHHH------hCcccCCeEEEeccee
Confidence 9998763 577777777777766 8999999999888887 6779999999999865
Q ss_pred H
Q 017757 339 I 339 (366)
Q Consensus 339 ~ 339 (366)
.
T Consensus 257 r 257 (260)
T KOG1199|consen 257 R 257 (260)
T ss_pred c
Confidence 4
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-31 Score=243.15 Aligned_cols=220 Identities=30% Similarity=0.430 Sum_probs=184.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---c
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---A 109 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---~ 109 (366)
|++++++++||||++|||++++++|+++|++|++++|+.+++++...++. .+.++.++.+|++|+++++++++. +
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 78 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP--YPGRHRWVVADLTSEAGREAVLARAREM 78 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999888887777662 256888999999999999888765 4
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.+++++++++|+.|++.+++.++|+|.+++ .++|+++||..+..
T Consensus 79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~----------- 144 (263)
T PRK09072 79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP---SAMVVNVGSTFGSI----------- 144 (263)
T ss_pred CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC---CCEEEEecChhhCc-----------
Confidence 7899999999987777788899999999999999999999999999998765 57999999988776
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|+++|+|+.+++++++.|+.++||+|++|+||+++|++.......
T Consensus 145 -----------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~ 196 (263)
T PRK09072 145 -----------GYPGYA-----------------SYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA 196 (263)
T ss_pred -----------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc
Confidence 556666 8999999999999999999999999999999999999976542211
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
.... ......+|+++++.++..+..+.
T Consensus 197 ---~~~~--~~~~~~~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 197 ---LNRA--LGNAMDDPEDVAAAVLQAIEKER 223 (263)
T ss_pred ---cccc--ccCCCCCHHHHHHHHHHHHhCCC
Confidence 0000 01124577888888777776654
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=248.96 Aligned_cols=223 Identities=22% Similarity=0.223 Sum_probs=183.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++++||||++|||+++|++|+++| ..|++.+|+.... . .+.++.++++|+++.++++++.++++++|++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~---~~~~~~~~~~Dls~~~~~~~~~~~~~~id~l 71 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F---QHDNVQWHALDVTDEAEIKQLSEQFTQLDWL 71 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c---ccCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 479999999999999999999985 5666667754321 1 1357889999999999999998889999999
Q ss_pred EEcCCCCCC------CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 116 VVNQGVFVP------GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 116 i~nAG~~~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
|||||.... ..+++.+.+.+++.+++|+.+++.+++.++|.|++++ .++|+++||..+...
T Consensus 72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~---~~~i~~iss~~~~~~---------- 138 (235)
T PRK09009 72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE---SAKFAVISAKVGSIS---------- 138 (235)
T ss_pred EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC---CceEEEEeecccccc----------
Confidence 999998743 3466788999999999999999999999999998764 578999998665320
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc--CCcEEEEEcCCCCCCCChhhhh
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA--DDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~--~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
..+.+... .|+++|+|+.+|+++|+.|+.+ .+|+||+|+||+++|++..+..
T Consensus 139 ---------~~~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~ 192 (235)
T PRK09009 139 ---------DNRLGGWY-----------------SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ 192 (235)
T ss_pred ---------cCCCCCcc-----------------hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh
Confidence 00123334 8999999999999999999986 6999999999999999854311
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...+.++...|+|++..+.+++ ++.+.+++|+.+.+||||.
T Consensus 193 ---------------------------~~~~~~~~~~~~~~a~~~~~l~----~~~~~~~~g~~~~~~g~~~ 233 (235)
T PRK09009 193 ---------------------------QNVPKGKLFTPEYVAQCLLGII----ANATPAQSGSFLAYDGETL 233 (235)
T ss_pred ---------------------------hccccCCCCCHHHHHHHHHHHH----HcCChhhCCcEEeeCCcCC
Confidence 1234567788899999999999 8888899999999999975
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=255.38 Aligned_cols=271 Identities=20% Similarity=0.204 Sum_probs=191.6
Q ss_pred EEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCcEE
Q 017757 41 FITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVDVL 115 (366)
Q Consensus 41 LITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id~v 115 (366)
|||||++|||+++|++|+++| ++|++++|+.++++++.+++... +.++.++++|++|.+++++++++ ++++|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP-KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 699999999999999999999 99999999988888777776432 45788899999999999988876 4789999
Q ss_pred EEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 116 VVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 116 i~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|||||+..+ .++.+.+.++|++++++|+.|++.+++.++|.|++++. ..++||++||.++.............+-..
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~- 157 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY-PSKRLIIVGSITGNTNTLAGNVPPKANLGD- 157 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CCCEEEEEeccccccccccccCCCccchhh-
Confidence 999998644 35567899999999999999999999999999987531 137999999988753100000000000000
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc-CCcEEEEEcCCCC-CCCChhhhhhcCCc
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA-DDIHVSLIFPPDT-ETPGLEEENKRRPR 272 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~-~gI~Vn~V~PG~v-~T~~~~~~~~~~~~ 272 (366)
......+..... .........+.+..+|++||+|+..+++.++.++.+ +||+||+|+||+| .|++.+.....
T Consensus 158 ~~~~~~~~~~~~---~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~--- 231 (308)
T PLN00015 158 LRGLAGGLNGLN---SSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL--- 231 (308)
T ss_pred hhhhhcccCCcc---chhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH---
Confidence 000000000000 000000012234458999999988999999999975 6999999999999 78876532100
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
...........+.+++.+|++.+..+++|+ ++...+.+|+.+..||+.
T Consensus 232 --------------~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~----~~~~~~~~G~~~~~~g~~ 279 (308)
T PLN00015 232 --------------FRLLFPPFQKYITKGYVSEEEAGKRLAQVV----SDPSLTKSGVYWSWNGGS 279 (308)
T ss_pred --------------HHHHHHHHHHHHhcccccHHHhhhhhhhhc----cccccCCCccccccCCcc
Confidence 000001122345677889999999999998 776667899999888863
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=253.91 Aligned_cols=205 Identities=24% Similarity=0.304 Sum_probs=167.2
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHH
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+....+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.... +.++.++++|++|.++++++++
T Consensus 6 ~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~ 85 (313)
T PRK05854 6 DITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGE 85 (313)
T ss_pred cccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHH
Confidence 344557899999999999999999999999999999999999999888888886654 3478899999999999999887
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
+ ++++|++|||||.... ...+.+.++++.++++|+.|++.+++.++|.|++. .++||++||.++....+..
T Consensus 86 ~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~----~~riv~vsS~~~~~~~~~~ 160 (313)
T PRK05854 86 QLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG----RARVTSQSSIAARRGAINW 160 (313)
T ss_pred HHHHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC----CCCeEEEechhhcCCCcCc
Confidence 6 4789999999998654 23356889999999999999999999999999864 4799999998875421110
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHh--ccCCcEEEEEcCCCCCCC
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIFPPDTETP 261 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~--~~~gI~Vn~V~PG~v~T~ 261 (366)
..+....++.+...|+.||+|+..+++.|+.++ ...||+||+|+||+|+|+
T Consensus 161 ---------------------------~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 161 ---------------------------DDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred ---------------------------ccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 001111122233489999999999999999864 467899999999999999
Q ss_pred Chhh
Q 017757 262 GLEE 265 (366)
Q Consensus 262 ~~~~ 265 (366)
+...
T Consensus 214 ~~~~ 217 (313)
T PRK05854 214 LLAA 217 (313)
T ss_pred cccc
Confidence 8653
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=238.22 Aligned_cols=219 Identities=21% Similarity=0.258 Sum_probs=188.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVL 115 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~v 115 (366)
+|+++||||++|||++++++|+++|++|++++|+.++.++..+++....+.++.++++|++|++++++++++. ..+|++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 3689999999999999999999999999999999988887777776555668999999999999999998875 468999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
|||||........+.+.+++++.+++|+.+++++++++.|.|.+++ .++++++||..+..
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~----------------- 140 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG---SGTIVGISSVAGDR----------------- 140 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CCEEEEEecccccC-----------------
Confidence 9999987777777889999999999999999999999999998765 58999999988765
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchh
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~ 275 (366)
+.++.. .|+++|+++.+++++++.|+.+.||+|++|+||+++|++......
T Consensus 141 -----~~~~~~-----------------~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~------- 191 (243)
T PRK07102 141 -----GRASNY-----------------VYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKL------- 191 (243)
T ss_pred -----CCCCCc-----------------ccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccCC-------
Confidence 555555 899999999999999999999999999999999999997654210
Q ss_pred hhhccCCCCCHHHHHHHHHhhhhCCCeEeeCC
Q 017757 276 IIAASSGAMKADEVAKKALDGIKSGSFIVPCN 307 (366)
Q Consensus 276 ~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~ 307 (366)
+.....+|+++++.+.+.+..++......
T Consensus 192 ---~~~~~~~~~~~a~~i~~~~~~~~~~i~~~ 220 (243)
T PRK07102 192 ---PGPLTAQPEEVAKDIFRAIEKGKDVIYTP 220 (243)
T ss_pred ---CccccCCHHHHHHHHHHHHhCCCCEEEcC
Confidence 11235689999999999998886544444
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=243.46 Aligned_cols=241 Identities=28% Similarity=0.340 Sum_probs=187.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
++|+++||||+||||++++++|+++|++|++++|++++++++.+ ..+.++..+.+|++|++++.+++++ +++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 57899999999999999999999999999999999877655433 2245788899999999999888765 478
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||.....++.+.+.+++++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---~~~iv~iSS~~~~~------------- 142 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR---RGHIVNITSMGGLI------------- 142 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC---CCEEEEEecccccC-------------
Confidence 99999999998777888899999999999999999999999999998865 57999999998876
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|+++|+++++++++++.|+.+.|++|++|+||.++|++.........
T Consensus 143 ---------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~ 196 (277)
T PRK06180 143 ---------TMPGIG-----------------YYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTP 196 (277)
T ss_pred ---------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCC
Confidence 666666 999999999999999999999999999999999999986433211100
Q ss_pred -cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHH
Q 017757 272 -RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAF 330 (366)
Q Consensus 272 -~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~ 330 (366)
...... .............+.+++..|++++..+.+++..+.. ...|++|.
T Consensus 197 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~-~~~~~~g~ 248 (277)
T PRK06180 197 RSIADYD-------ALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESDEP-PLHLLLGS 248 (277)
T ss_pred CCcHhHH-------HHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCCCC-CeeEeccH
Confidence 000000 0000011111122345677889999999888743332 24466654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-30 Score=243.63 Aligned_cols=193 Identities=27% Similarity=0.326 Sum_probs=169.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|.++++++++. +
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 567899999999999999999999999999999999988888777777543 55788999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---CCcEEEEecCCccccccccccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNG---GPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~---~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
+++|+||||||......+.+.+.++++.++++|+.|+++++++++|.|.++..+ ..++||++||.++..
T Consensus 82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------- 153 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL-------- 153 (287)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--------
Confidence 789999999999888888888999999999999999999999999999876531 127999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc--CCcEEEEEcCCCCCCCChh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA--DDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~--~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.+... .|++||+++++++++++.++.. .+||+++|+||++.|++..
T Consensus 154 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~ 202 (287)
T PRK06194 154 --------------APPAMG-----------------IYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ 202 (287)
T ss_pred --------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccc
Confidence 555666 8999999999999999999874 5699999999999999876
Q ss_pred hh
Q 017757 265 EE 266 (366)
Q Consensus 265 ~~ 266 (366)
..
T Consensus 203 ~~ 204 (287)
T PRK06194 203 SE 204 (287)
T ss_pred cc
Confidence 43
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-31 Score=245.18 Aligned_cols=236 Identities=19% Similarity=0.217 Sum_probs=189.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc----C--
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA----G-- 110 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~----~-- 110 (366)
|+++||||++|||+++|++|+++|++|++++|+. +.+++. ....+.++.++++|+++++++++++++. +
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL----AEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED 77 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH----HhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence 6899999999999999999999999999999986 333332 2223557889999999999999988763 2
Q ss_pred CC--cEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 111 PV--DVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 111 ~i--d~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
.+ +++|+|||...+ .++.+.+.+++.+.+++|+.+++.+++.++|+|++.+. .++||++||..+..
T Consensus 78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~--------- 146 (251)
T PRK06924 78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKV--DKRVINISSGAAKN--------- 146 (251)
T ss_pred cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCC--CceEEEecchhhcC---------
Confidence 22 289999998654 56788999999999999999999999999999987432 46999999987765
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc--cCCcEEEEEcCCCCCCCChhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.+... .|+++|+|++++++.++.|++ +.||+|++|+||+++|++...
T Consensus 147 -------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~ 196 (251)
T PRK06924 147 -------------PYFGWS-----------------AYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQ 196 (251)
T ss_pred -------------CCCCcH-----------------HHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHH
Confidence 555666 999999999999999999986 468999999999999998654
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAA 336 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dg 336 (366)
...... ......+.+....+.+++..++|++..+++|+ ++. .+++|+.+.+|+
T Consensus 197 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~-~~~~G~~~~v~~ 249 (251)
T PRK06924 197 IRSSSK-------------EDFTNLDRFITLKEEGKLLSPEYVAKALRNLL----ETE-DFPNGEVIDIDE 249 (251)
T ss_pred HHhcCc-------------ccchHHHHHHHHhhcCCcCCHHHHHHHHHHHH----hcc-cCCCCCEeehhh
Confidence 321110 00111234445567889999999999999999 664 788999988875
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-30 Score=236.74 Aligned_cols=208 Identities=22% Similarity=0.244 Sum_probs=175.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~vi 116 (366)
++++||||++|||++++++|+++|++|++++|+++++++..+. ..++.++++|++|.+++++++++. ..+|.+|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-----SANIFTLAFDVTDHPGTKAALSQLPFIPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-----cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence 7899999999999999999999999999999998766554332 346788999999999999999885 3579999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
||||.....+..+.+++++++++++|+.|++++++.+.|+|.+ .++|+++||.++..
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~iv~isS~~~~~------------------ 133 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-----GHRVVIVGSIASEL------------------ 133 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCeEEEEechhhcc------------------
Confidence 9999765444456789999999999999999999999999965 46899999988776
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhh
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSI 276 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~ 276 (366)
+.++.. .|++||+++++++++++.|+.++||+|++|+||+++|++........
T Consensus 134 ----~~~~~~-----------------~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~~------ 186 (240)
T PRK06101 134 ----ALPRAE-----------------AYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFAM------ 186 (240)
T ss_pred ----CCCCCc-----------------hhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCCC------
Confidence 666666 89999999999999999999999999999999999999865421111
Q ss_pred hhccCCCCCHHHHHHHHHhhhhCCCeEe
Q 017757 277 IAASSGAMKADEVAKKALDGIKSGSFIV 304 (366)
Q Consensus 277 ~~~~~~~~~~~~~a~~~~~~i~~gr~~~ 304 (366)
...++|+++++.+++.+..++...
T Consensus 187 ----~~~~~~~~~a~~i~~~i~~~~~~~ 210 (240)
T PRK06101 187 ----PMIITVEQASQEIRAQLARGKSHI 210 (240)
T ss_pred ----CcccCHHHHHHHHHHHHhcCCCEE
Confidence 124689999999999998876443
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-30 Score=236.34 Aligned_cols=212 Identities=26% Similarity=0.356 Sum_probs=184.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++++|+++++++++++++ +++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 7899999999999999999999999999999999988888777766543 56789999999999999888765 578
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||+.....+.+.+.+.+++++++|+.+++.+++.++|.|++.+ .++||++||..+..
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~------------- 145 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG---SGHLVLISSVSAVR------------- 145 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCeEEEEecccccc-------------
Confidence 99999999998777777888999999999999999999999999998765 57999999988765
Q ss_pred cccccccCCCCCC-ccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 192 NKLCESSGKGHGG-YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 192 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.+. .. .|++||+++.++++.++.++...||+|++|+||+++|++.+.....
T Consensus 146 ---------~~~~~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~- 198 (248)
T PRK08251 146 ---------GLPGVKA-----------------AYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKST- 198 (248)
T ss_pred ---------CCCCCcc-----------------cHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccccC-
Confidence 4443 45 8999999999999999999998899999999999999987653221
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
...+++++.++.+++.+..++
T Consensus 199 ----------~~~~~~~~~a~~i~~~~~~~~ 219 (248)
T PRK08251 199 ----------PFMVDTETGVKALVKAIEKEP 219 (248)
T ss_pred ----------CccCCHHHHHHHHHHHHhcCC
Confidence 124689999999999988764
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=277.50 Aligned_cols=257 Identities=24% Similarity=0.244 Sum_probs=216.4
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
....++||+++||||+||||++++++|+++|++|++++|+.+.+++..+++... .++.++.+|++|++++++++++
T Consensus 416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~v~~~~~~~~ 493 (681)
T PRK08324 416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAAVQAAFEEAA 493 (681)
T ss_pred CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHHHHHHHHHHH
Confidence 344578999999999999999999999999999999999998887777766543 4788999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+.+.|++++. .++||++||..+..
T Consensus 494 ~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~--~g~iV~vsS~~~~~-------- 563 (681)
T PRK08324 494 LAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL--GGSIVFIASKNAVN-------- 563 (681)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CcEEEEECCccccC--------
Confidence 578999999999988888889999999999999999999999999999988652 37999999988876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC--CCCChh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT--ETPGLE 264 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v--~T~~~~ 264 (366)
+.++.. .|++||+++++++++++.++++.||+||+|+||.+ .|++..
T Consensus 564 --------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~ 612 (681)
T PRK08324 564 --------------PGPNFG-----------------AYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT 612 (681)
T ss_pred --------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc
Confidence 666666 99999999999999999999999999999999999 887654
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
...... ......+++++..+.+....+.++++.++|++..+.+++ ++...++||+.+.+|||..+.
T Consensus 613 ~~~~~~-------~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~----s~~~~~~tG~~i~vdgG~~~~ 678 (681)
T PRK08324 613 GEWIEA-------RAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLA----SGLLSKTTGAIITVDGGNAAA 678 (681)
T ss_pred chhhhh-------hhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHh----CccccCCcCCEEEECCCchhc
Confidence 321100 001112345555455566677889999999999999999 888889999999999997653
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-30 Score=238.64 Aligned_cols=183 Identities=33% Similarity=0.425 Sum_probs=165.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-----cCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-----AGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-----~~~i 112 (366)
|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+. +.++.++++|+++.++++++++. .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 789999999999999999999999999999999888777766554 45789999999999999988765 4789
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+||||||......+.+.+.+++++++++|+.+++.+++++.++|++++ .++||++||..+..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~-------------- 141 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP---GARVINTSSASAIY-------------- 141 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCEEEEeCchhhCc--------------
Confidence 9999999998878888899999999999999999999999999998765 57999999988876
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+++++++++++.++.++||+|++|.||+++|++...
T Consensus 142 --------~~~~~~-----------------~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~ 189 (260)
T PRK08267 142 --------GQPGLA-----------------VYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG 189 (260)
T ss_pred --------CCCCch-----------------hhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence 666666 999999999999999999999999999999999999998654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.5e-31 Score=240.21 Aligned_cols=241 Identities=30% Similarity=0.396 Sum_probs=206.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++++|+++||||+++||++++++|+++|++|++++|++++.+...+++... +.++.++.+|++|++++.+++++
T Consensus 1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA-GGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999988877777666543 56788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++||+||.....+..+.+.++++..++.|+.+++++++++.|++++.+ .++||++||..+..
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~~ss~~~~~---------- 146 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR---YGRIVNISSVSGVT---------- 146 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEECcHHhcc----------
Confidence 47899999999987777777889999999999999999999999999998765 57999999987655
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+.+|++++.++++++.++.+.|+++++|+||.+.+++....
T Consensus 147 ------------~~~~~~-----------------~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~-- 195 (246)
T PRK05653 147 ------------GNPGQT-----------------NYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL-- 195 (246)
T ss_pred ------------CCCCCc-----------------HhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh--
Confidence 444555 8999999999999999999998999999999999999876431
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+...+.....++.+++..++|++..+.+++ ++.+.+++|+.+.+|||..
T Consensus 196 -----------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~----~~~~~~~~g~~~~~~gg~~ 245 (246)
T PRK05653 196 -----------------PEEVKAEILKEIPLGRLGQPEEVANAVAFLA----SDAASYITGQVIPVNGGMY 245 (246)
T ss_pred -----------------hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCccCCEEEeCCCee
Confidence 1233344555667788899999999999999 8888899999999999953
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=237.29 Aligned_cols=192 Identities=26% Similarity=0.317 Sum_probs=172.3
Q ss_pred cCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Q 017757 27 RPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 27 ~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~ 106 (366)
.-+..-.++.+|.|+|||+.+|+|+.+|++|.++|..|++...+++..+++..+.. ..+...+++|+|++++|+++.
T Consensus 19 ~~~~~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~ 95 (322)
T KOG1610|consen 19 LERQVLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAA 95 (322)
T ss_pred HhhhcccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHH
Confidence 34455677899999999999999999999999999999999988887777666554 567888899999999999987
Q ss_pred Hhc------CCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccc
Q 017757 107 DEA------GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179 (366)
Q Consensus 107 ~~~------~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~ 179 (366)
+.. .++-.||||||+.. .++.+-.+.+++++++++|++|++.++++++|+++++ +||||++||+.|..
T Consensus 96 ~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a----rGRvVnvsS~~GR~- 170 (322)
T KOG1610|consen 96 QWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA----RGRVVNVSSVLGRV- 170 (322)
T ss_pred HHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc----cCeEEEecccccCc-
Confidence 652 46999999999764 5777778999999999999999999999999999997 48999999999987
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.|... +|++||+|++.++.++++|+.++||.|.+|.||...
T Consensus 171 ---------------------~~p~~g-----------------~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~ 212 (322)
T KOG1610|consen 171 ---------------------ALPALG-----------------PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFK 212 (322)
T ss_pred ---------------------cCcccc-----------------cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccc
Confidence 888888 999999999999999999999999999999999999
Q ss_pred CCChh
Q 017757 260 TPGLE 264 (366)
Q Consensus 260 T~~~~ 264 (366)
|++..
T Consensus 213 T~l~~ 217 (322)
T KOG1610|consen 213 TNLAN 217 (322)
T ss_pred cccCC
Confidence 99986
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-31 Score=240.70 Aligned_cols=186 Identities=30% Similarity=0.389 Sum_probs=166.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
++|+++||||+++||++++++|+++|++|++++|++++.++..+++... +.++.++.+|++|++++.+++++ +++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-GVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999988877777776543 45788999999999998877765 578
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+..
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~------------- 147 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG---GGLIINVSSIAARN------------- 147 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC---CcEEEEEccHHhCc-------------
Confidence 99999999987777778889999999999999999999999999998765 57999999988765
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|+++|++++.++++++.++.+.||++++|.||.++|++..
T Consensus 148 ---------~~~~~~-----------------~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~ 194 (241)
T PRK07454 148 ---------AFPQWG-----------------AYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD 194 (241)
T ss_pred ---------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence 555666 89999999999999999999999999999999999999754
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.4e-30 Score=233.71 Aligned_cols=220 Identities=30% Similarity=0.458 Sum_probs=188.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++++++||||+++||++++++|+++|++|++++|+.++.++..+++.. .+.++.++.+|+++++++++++++
T Consensus 3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-YGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999998888877777754 356889999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||......+.+.+++++++++++|+.+++.+++.+.|++.+++ .+++|++||..+..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~ss~~~~~---------- 148 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ---SGDIINISSTAGQK---------- 148 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CcEEEEEcchhhcc----------
Confidence 47899999999987777777889999999999999999999999999998765 57999999988876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+++|+|+..++++++.|+.+.||++++|+||.+.|++......
T Consensus 149 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~ 199 (239)
T PRK07666 149 ------------GAAVTS-----------------AYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGL 199 (239)
T ss_pred ------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccc
Confidence 666666 899999999999999999999999999999999999997654321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCe
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSF 302 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~ 302 (366)
... .....++++++++.+.+.+..++-
T Consensus 200 ~~~-------~~~~~~~~~~~a~~~~~~l~~~~~ 226 (239)
T PRK07666 200 TDG-------NPDKVMQPEDLAEFIVAQLKLNKR 226 (239)
T ss_pred ccc-------CCCCCCCHHHHHHHHHHHHhCCCc
Confidence 100 112356889999999988877753
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-31 Score=240.81 Aligned_cols=229 Identities=25% Similarity=0.336 Sum_probs=192.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCC--CHHHHHHHHHh-
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR--DFDAVKTALDE- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls--~~~~v~~~~~~- 108 (366)
...+++|+++||||+++||.+++++|+++|++|++++|+.+++++..+++......++.++.+|++ ++++++++++.
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 346799999999999999999999999999999999999988888877776654556777888886 67777776654
Q ss_pred ---cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|++|||||.... .++.+.+.+++++.+++|+.++++++++++|+|++++ .++|+++||..+..
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~---~~~iv~~ss~~~~~------ 157 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP---AASLVFTSSSVGRQ------ 157 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC---CCEEEEEccHhhcC------
Confidence 5789999999998644 5667788999999999999999999999999998876 57999999988766
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.+... .|++||+|++++++.++.++...||++++|+||.++|++..
T Consensus 158 ----------------~~~~~~-----------------~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~ 204 (247)
T PRK08945 158 ----------------GRANWG-----------------AYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA 204 (247)
T ss_pred ----------------CCCCCc-----------------ccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh
Confidence 556666 89999999999999999999999999999999999998643
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
..... + ..+++..++|++..+.|++ ++.+.+++|+.+.
T Consensus 205 ~~~~~-----------------~----------~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~ 242 (247)
T PRK08945 205 SAFPG-----------------E----------DPQKLKTPEDIMPLYLYLM----GDDSRRKNGQSFD 242 (247)
T ss_pred hhcCc-----------------c----------cccCCCCHHHHHHHHHHHh----CccccccCCeEEe
Confidence 32110 0 1235677888889999998 9989899998753
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=230.20 Aligned_cols=189 Identities=16% Similarity=0.202 Sum_probs=162.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||++|||++++++|+++ ++|++++|+.. .+++|++|++++++++++++++|++|||
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ 62 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEKVGKVDAVVSA 62 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence 6999999999999999999999 99999999753 3689999999999999999999999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||.....++.+.++++|++.+++|+.+++++++.+.|+|++ .++|+++||..+..
T Consensus 63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~g~iv~iss~~~~~-------------------- 117 (199)
T PRK07578 63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-----GGSFTLTSGILSDE-------------------- 117 (199)
T ss_pred CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCeEEEEcccccCC--------------------
Confidence 99877777888899999999999999999999999999975 47999999988876
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhh
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIA 278 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~ 278 (366)
+.++.. .|++||+|+++|+++++.|+ ++||+||+|+||+++|++..... ..
T Consensus 118 --~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~-~~-------- 168 (199)
T PRK07578 118 --PIPGGA-----------------SAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYGP-FF-------- 168 (199)
T ss_pred --CCCCch-----------------HHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhhh-cC--------
Confidence 666677 99999999999999999999 88999999999999998643211 00
Q ss_pred ccCCCCCHHHHHHHHHhhhhCC
Q 017757 279 ASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 279 ~~~~~~~~~~~a~~~~~~i~~g 300 (366)
+....++|+++++.+...+...
T Consensus 169 ~~~~~~~~~~~a~~~~~~~~~~ 190 (199)
T PRK07578 169 PGFEPVPAARVALAYVRSVEGA 190 (199)
T ss_pred CCCCCCCHHHHHHHHHHHhccc
Confidence 1123467888887777666543
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=241.03 Aligned_cols=240 Identities=24% Similarity=0.231 Sum_probs=193.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
++++++++|||||+++||++++++|+++|++|++..|+ .+...+..+.+... +.++..+.+|+++++++++++++
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GGEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CCeeEEEEeccCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999887764 34444444444433 45778899999999999888776
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||...+.++.+.+.+++++.+++|+.+++.+++++.|+|++ .++||++||.+++.
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~--------- 146 (252)
T PRK06077 81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-----GGAIVNIASVAGIR--------- 146 (252)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-----CcEEEEEcchhccC---------
Confidence 478999999999877777788899999999999999999999999999976 46999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+++++++++++.|+.+ +|+++.|.||+++|++.....
T Consensus 147 -------------~~~~~~-----------------~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~ 195 (252)
T PRK06077 147 -------------PAYGLS-----------------IYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLF 195 (252)
T ss_pred -------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhh
Confidence 666666 9999999999999999999988 999999999999999754322
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... ....++..+ ...+.+++..++|++..+.+++ + ...++|+.+.+|+|+.
T Consensus 196 ~~~------------~~~~~~~~~---~~~~~~~~~~~~dva~~~~~~~----~--~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 196 KVL------------GMSEKEFAE---KFTLMGKILDPEEVAEFVAAIL----K--IESITGQVFVLDSGES 246 (252)
T ss_pred hcc------------cccHHHHHH---hcCcCCCCCCHHHHHHHHHHHh----C--ccccCCCeEEecCCee
Confidence 110 011222222 1234568899999999999998 4 3357899999999865
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=238.15 Aligned_cols=179 Identities=34% Similarity=0.409 Sum_probs=161.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
++++++||||+||||++++++|+++|++|++++|+.++.+. ..++.++++|++|++++++++++ +++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 73 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVIARAGR 73 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999998765432 23577899999999999888875 588
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||......+.+.+.+++++++++|+.|++.+++.++|+|++++ .++||++||..+..
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~------------- 137 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG---SGRIINISSVLGFL------------- 137 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CceEEEECCccccC-------------
Confidence 99999999998878888899999999999999999999999999998876 68999999998876
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.+... .|++||+++++++++++.|+.++||+|++|+||+++|++..+
T Consensus 138 ---------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~ 185 (270)
T PRK06179 138 ---------PAPYMA-----------------LYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDAN 185 (270)
T ss_pred ---------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccc
Confidence 666667 899999999999999999999999999999999999998654
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-30 Score=238.13 Aligned_cols=214 Identities=24% Similarity=0.285 Sum_probs=174.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id 113 (366)
|++|||||++|||++++++|+++|++|++++|+.+++++..+ ..+.++.+|+++.+++++++++ ++++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 74 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-------AGFTAVQLDVNDGAALARLAEELEAEHGGLD 74 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 789999999999999999999999999999999876554321 2366889999999999888765 47899
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
++|||||.....++.+.+.+++++.+++|+.|++.++++++|.|++. .++||++||..+..
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~g~iv~isS~~~~~--------------- 135 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS----RGLVVNIGSVSGVL--------------- 135 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc----CCEEEEECCccccC---------------
Confidence 99999998777788888999999999999999999999999999763 47999999998876
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc-
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR- 272 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~- 272 (366)
+.+... .|++||++++.++++++.|++++||+|++|+||.|+|++.+........
T Consensus 136 -------~~~~~~-----------------~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~ 191 (274)
T PRK05693 136 -------VTPFAG-----------------AYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQL 191 (274)
T ss_pred -------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhc
Confidence 556666 8999999999999999999999999999999999999986642211100
Q ss_pred ------chhh-------h-hccCCCCCHHHHHHHHHhhhhCCC
Q 017757 273 ------LTSI-------I-AASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 273 ------~~~~-------~-~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
.... . .......+|+++++.++..+..++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~ 234 (274)
T PRK05693 192 LAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQSP 234 (274)
T ss_pred CCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence 0000 0 001224578888888888877654
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=241.30 Aligned_cols=252 Identities=29% Similarity=0.394 Sum_probs=205.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
...+++|+++||||+|+||++++++|+++|++|++++|+.+..++..++... .++.++.+|++|++++++++++
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG---AKVTATVADVADPAQVERVFDTAVE 82 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CceEEEEccCCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999998776666555432 2678899999999999888776
Q ss_pred -cCCCcEEEEcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||.. ......+.+.+++++++++|+.+++.+++.+++.+.+.+. .++|+++||.++..
T Consensus 83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~vv~~ss~~~~~-------- 152 (264)
T PRK12829 83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH--GGVIIALSSVAGRL-------- 152 (264)
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CeEEEEeccccccc--------
Confidence 47899999999987 4566678899999999999999999999999999887541 26899999987765
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.+... .|+++|++++.+++.++.++...++++++|.||++.|++....
T Consensus 153 --------------~~~~~~-----------------~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~ 201 (264)
T PRK12829 153 --------------GYPGRT-----------------PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV 201 (264)
T ss_pred --------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH
Confidence 555556 8999999999999999999988899999999999999987654
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
....... ................+.+++..+++++..+.+++ ++....++|+.+.+|||..
T Consensus 202 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~----~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 202 IEARAQQ--------LGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLA----SPAARYITGQAISVDGNVE 262 (264)
T ss_pred hhhhhhc--------cCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CccccCccCcEEEeCCCcc
Confidence 2210000 01122333344555567778999999999999998 7777788999999999854
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=223.05 Aligned_cols=182 Identities=27% Similarity=0.368 Sum_probs=165.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++.|.++|||||++|||+++|++|.+.|-+|++++|+.++++++.++.. .+....||+.|.++.++++++
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p-----~~~t~v~Dv~d~~~~~~lvewLkk~ 75 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP-----EIHTEVCDVADRDSRRELVEWLKKE 75 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc-----chheeeecccchhhHHHHHHHHHhh
Confidence 57889999999999999999999999999999999999999999887654 678899999999998888765
Q ss_pred cCCCcEEEEcCCCCCCCCcc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 AGPVDVLVVNQGVFVPGELE--VQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
+..++++|||||+...-.+. +...++.+..+++|+.++..+++.++|++.+++ .+.||+|||..++.
T Consensus 76 ~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~---~a~IInVSSGLafv-------- 144 (245)
T COG3967 76 YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP---EATIINVSSGLAFV-------- 144 (245)
T ss_pred CCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC---CceEEEeccccccC--------
Confidence 67899999999998765544 346778899999999999999999999999987 68999999999887
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+....+ .|+++|||+..++.+|+..+...+|.|--+.|..|+|+
T Consensus 145 --------------Pm~~~P-----------------vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 145 --------------PMASTP-----------------VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred --------------cccccc-----------------cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 777777 99999999999999999999999999999999999997
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=239.06 Aligned_cols=248 Identities=28% Similarity=0.354 Sum_probs=202.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
+|++|||||+|+||++++++|+++|++|++++|+.+..+++.+++... +.++..+.+|++|.+++++++++ ++++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-GGSVIYLVADVTKEDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999999999999999988877777666543 45788999999999999887765 4789
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||........+.+++++++++++|+.+++.+++.+++.|++.+ .+++|++||..+..
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~---~~~~v~~ss~~~~~-------------- 142 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG---WGRIINIASAHGLV-------------- 142 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CeEEEEEcchhhcC--------------
Confidence 9999999987776677788999999999999999999999999998765 57999999987765
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.+... .|+++|+++++++++++.++.+.+|+|+.++||.+.|++..........
T Consensus 143 --------~~~~~~-----------------~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~ 197 (255)
T TIGR01963 143 --------ASPFKS-----------------AYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAK 197 (255)
T ss_pred --------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhc
Confidence 555556 8999999999999999999988899999999999999976543211100
Q ss_pred chhhhhccCCCCCHHHHHHH-HHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKK-ALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~-~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
......+..... +....+.+++..++|++..+.+++ ++....++|+.+.+|||++
T Consensus 198 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~----~~~~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 198 --------TRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLA----SDAAAGITGQAIVLDGGWT 253 (255)
T ss_pred --------ccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHc----CccccCccceEEEEcCccc
Confidence 011222333322 223345567889999999999998 7666778999999999976
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=244.29 Aligned_cols=230 Identities=22% Similarity=0.231 Sum_probs=175.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++. ++.++++|++|.+++++++++
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~ 96 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDS 96 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999888777766653 377899999999999998876
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||...+. .+.+.++++..+++|+.+++.+++.++|.|++++ .++||++||..+...+.....
T Consensus 97 ~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~---~~~iV~vSS~~~~~~~~~~~~--- 168 (315)
T PRK06196 97 GRRIDILINNAGVMACP--ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA---GARVVALSSAGHRRSPIRWDD--- 168 (315)
T ss_pred CCCCCEEEECCCCCCCC--CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC---CCeEEEECCHHhccCCCCccc---
Confidence 47899999999976432 3457788999999999999999999999998865 579999999765331110000
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
.....++.+...|++||+|+..+++.++.++.++||+||+|+||++.|++.+....
T Consensus 169 ------------------------~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~ 224 (315)
T PRK06196 169 ------------------------PHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPR 224 (315)
T ss_pred ------------------------cCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCCh
Confidence 00001122233899999999999999999999999999999999999997643211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHh--hhhCC-CeEeeCCchhHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALD--GIKSG-SFIVPCNSEGFLLSIA 316 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~--~i~~g-r~~~~~~v~~~~~~L~ 316 (366)
. +........ ..+.+ ++..|++.+..++||+
T Consensus 225 ~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 258 (315)
T PRK06196 225 E-----------------EQVALGWVDEHGNPIDPGFKTPAQGAATQVWAA 258 (315)
T ss_pred h-----------------hhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHh
Confidence 0 000000000 11122 5678889999999998
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=239.24 Aligned_cols=240 Identities=33% Similarity=0.435 Sum_probs=189.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh--HHHHHHHHHhhcC-CeEEEEEecCCC-HHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK--LEEAKQSIQLATG-IEVATYSADVRD-FDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~--~~~~~~~l~~~~~-~~v~~~~~Dls~-~~~v~~~~~~ 108 (366)
+.+++|+++||||++|||+++|++|+++|++|+++.|+.+. .+...+... ..+ ..+.+..+|+++ .++++.+++.
T Consensus 1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~ 79 (251)
T COG1028 1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAA 79 (251)
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence 35789999999999999999999999999999988887664 344443333 222 368889999998 9998887765
Q ss_pred ----cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||.... .++.+.+.+++++++++|+.+++.+++.+.|++++ . +||++||..+..
T Consensus 80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-----~-~Iv~isS~~~~~----- 148 (251)
T COG1028 80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK-----Q-RIVNISSVAGLG----- 148 (251)
T ss_pred HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh-----C-eEEEECCchhcC-----
Confidence 5889999999999887 48889999999999999999999999988888883 3 999999988642
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
..+... .|++||+|+.+|+++++.|+.++||+||+|+||+++|++.
T Consensus 149 -----------------~~~~~~-----------------~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~ 194 (251)
T COG1028 149 -----------------GPPGQA-----------------AYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMT 194 (251)
T ss_pred -----------------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcch
Confidence 221134 8999999999999999999999999999999999999988
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCC-chhHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSP-QRSVLMAFVEVVAAGL 338 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~-~~~~itG~~i~~dgG~ 338 (366)
....... . .. ........+.++++.|.++...+.|+. +. ...+++|+.+.+|||+
T Consensus 195 ~~~~~~~-~--------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~ 250 (251)
T COG1028 195 AALESAE-L--------------EA-LKRLAARIPLGRLGTPEEVAAAVAFLA----SDEAASYITGQTLPVDGGL 250 (251)
T ss_pred hhhhhhh-h--------------hH-HHHHHhcCCCCCCcCHHHHHHHHHHHc----CcchhccccCCEEEeCCCC
Confidence 7643321 0 00 111111115557888888888888887 44 4668888877777764
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=236.83 Aligned_cols=232 Identities=25% Similarity=0.335 Sum_probs=195.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|+++||||+|+||++++++|+++|++|++++|+.++.++..+++.. ..+..+.+|++|.+++++++++
T Consensus 2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (239)
T PRK12828 2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA---DALRIGGIDLVDPQAARRAVDEVNR 78 (239)
T ss_pred CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh---cCceEEEeecCCHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999998777666555543 2456778999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++||++|......+.+.+.+++++.+++|+.+++.+++++++.+++++ .++||++||..+..
T Consensus 79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~--------- 146 (239)
T PRK12828 79 QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG---GGRIVNIGAGAALK--------- 146 (239)
T ss_pred HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC---CCEEEEECchHhcc---------
Confidence 57899999999987766777789999999999999999999999999998765 67999999988766
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+... .|+++|+++..+++.++.++.+.||++++|.||.+.|++.....
T Consensus 147 -------------~~~~~~-----------------~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~ 196 (239)
T PRK12828 147 -------------AGPGMG-----------------AYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM 196 (239)
T ss_pred -------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC
Confidence 555566 89999999999999999999989999999999999998543211
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..+ ..+++..++|++..+.+++ ++.+.+++|+.+.+|||..
T Consensus 197 -----------------~~~----------~~~~~~~~~dva~~~~~~l----~~~~~~~~g~~~~~~g~~~ 237 (239)
T PRK12828 197 -----------------PDA----------DFSRWVTPEQIAAVIAFLL----SDEAQAITGASIPVDGGVA 237 (239)
T ss_pred -----------------Cch----------hhhcCCCHHHHHHHHHHHh----CcccccccceEEEecCCEe
Confidence 001 1123567888889999998 7777789999999999853
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-30 Score=234.59 Aligned_cols=228 Identities=22% Similarity=0.287 Sum_probs=181.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id 113 (366)
++++||||+||||++++++|+++|++|++++|+++++++..+.+ +.++.++.+|++|.+++++++++ ++++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----ccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999999999988766655443 44788999999999999888765 47899
Q ss_pred EEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 114 VLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 114 ~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
++|||||... ..++.+.+.+++++++++|+.|++.+++.++|+|++++ .++||++||..+..
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~-------------- 139 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN---HGHIINIGSTAGSW-------------- 139 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEECCcccCC--------------
Confidence 9999999754 34566789999999999999999999999999998765 57999999987765
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.++.. .|+++|++++++++.++.++.+.||+||+|+||.+.|+.........
T Consensus 140 --------~~~~~~-----------------~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~-- 192 (248)
T PRK10538 140 --------PYAGGN-----------------VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG-- 192 (248)
T ss_pred --------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC--
Confidence 555566 89999999999999999999999999999999999855443211000
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
.++...+ .........|+|++..+.||+ +....+.+++...
T Consensus 193 ------------~~~~~~~----~~~~~~~~~~~dvA~~~~~l~----~~~~~~~~~~~~~ 233 (248)
T PRK10538 193 ------------DDGKAEK----TYQNTVALTPEDVSEAVWWVA----TLPAHVNINTLEM 233 (248)
T ss_pred ------------cHHHHHh----hccccCCCCHHHHHHHHHHHh----cCCCcccchhhcc
Confidence 0111111 111234567888889999998 6666666666654
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=235.39 Aligned_cols=240 Identities=31% Similarity=0.404 Sum_probs=198.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--- 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--- 109 (366)
.+++|++|||||+|+||++++++|+++|++|+++.|+.. ..+...+.+... +.++.++.+|+++++++++++++.
T Consensus 3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-GRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 466789999999999999999999999999888666544 344444444432 567889999999999999888763
Q ss_pred -CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 -GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 -~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||...+..+.+.+.+++++++++|+.+++++++.+.+++++.+ .+++|++||..+..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~~i~~SS~~~~~---------- 148 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR---GGRIVNISSVAGLP---------- 148 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CCEEEEECccccCC----------
Confidence 7899999999987777778889999999999999999999999999998865 57999999988765
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|+.+|+++.++++.++.++.+.|+++++|+||.+.|++......
T Consensus 149 ------------~~~~~~-----------------~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~ 199 (249)
T PRK12825 149 ------------GWPGRS-----------------NYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIE 199 (249)
T ss_pred ------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccc
Confidence 555555 899999999999999999999899999999999999997654211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. .... . ....+.++...++|++..+.+++ ++...+++|+++.+|||..
T Consensus 200 ~-----------------~~~~-~-~~~~~~~~~~~~~dva~~~~~~~----~~~~~~~~g~~~~i~~g~~ 247 (249)
T PRK12825 200 E-----------------AREA-K-DAETPLGRSGTPEDIARAVAFLC----SDASDYITGQVIEVTGGVD 247 (249)
T ss_pred h-----------------hHHh-h-hccCCCCCCcCHHHHHHHHHHHh----CccccCcCCCEEEeCCCEe
Confidence 0 1110 0 12456777889999999999999 7778899999999999853
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=235.34 Aligned_cols=240 Identities=21% Similarity=0.263 Sum_probs=194.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+..++++++||||+|+||++++++|+++|++|++++|+. +..+...+.++...+..+.++.+|++|.+++++++++
T Consensus 2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (249)
T PRK09135 2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA 81 (249)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999864 4455555555544455688999999999999988776
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||...+.++.+.+.++++.++++|+.+++.+++++.|.+.++ .+++++++|..+..
T Consensus 82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~--------- 148 (249)
T PRK09135 82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ----RGAIVNITDIHAER--------- 148 (249)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC----CeEEEEEeChhhcC---------
Confidence 4789999999998777777778899999999999999999999999998764 36888888765543
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||++++.++++++.++.+ ++++++|.||++.|++....
T Consensus 149 -------------~~~~~~-----------------~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~- 196 (249)
T PRK09135 149 -------------PLKGYP-----------------VYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNS- 196 (249)
T ss_pred -------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCcccccc-
Confidence 445555 8999999999999999999965 79999999999999974321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. +....+......+.++.+.++|++..+.+++ .+ ..+.+|+.+.+|+|..
T Consensus 197 ----------------~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~----~~-~~~~~g~~~~i~~g~~ 246 (249)
T PRK09135 197 ----------------F-DEEARQAILARTPLKRIGTPEDIAEAVRFLL----AD-ASFITGQILAVDGGRS 246 (249)
T ss_pred ----------------C-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHc----Cc-cccccCcEEEECCCee
Confidence 1 1233344445556677788999999998887 54 4567999999999864
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-29 Score=227.62 Aligned_cols=221 Identities=25% Similarity=0.300 Sum_probs=189.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
|++++++++||||+|+||+++|++|+++|+ +|++++|+.+++++ .+.++.++.+|++|.+++++++++.++
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEAASD 73 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHhcCC
Confidence 568899999999999999999999999999 99999999876543 255788999999999999999999889
Q ss_pred CcEEEEcCCC-CCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 112 VDVLVVNQGV-FVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 112 id~vi~nAG~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
+|++||+||. .....+.+.+.+++++.+++|+.+++.+++++.|.+++++ .++++++||..+..
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~~v~~sS~~~~~------------ 138 (238)
T PRK08264 74 VTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG---GGAIVNVLSVLSWV------------ 138 (238)
T ss_pred CCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCEEEEEcChhhcc------------
Confidence 9999999998 5566778889999999999999999999999999998765 57999999988765
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.+... .|+++|++++++++.++.++.+.|++++++.||.++|++......
T Consensus 139 ----------~~~~~~-----------------~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~-- 189 (238)
T PRK08264 139 ----------NFPNLG-----------------TYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA-- 189 (238)
T ss_pred ----------CCCCch-----------------HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc--
Confidence 555666 899999999999999999999999999999999999997543211
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEe-eCCchhHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIV-PCNSEGFLLSIA 316 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~-~~~v~~~~~~L~ 316 (366)
...+++++++.++..+..++... .+++...+..++
T Consensus 190 -----------~~~~~~~~a~~~~~~~~~~~~~i~~~~~~~~~~~~~ 225 (238)
T PRK08264 190 -----------PKASPADVARQILDALEAGDEEVLPDEMARQVKAAL 225 (238)
T ss_pred -----------CCCCHHHHHHHHHHHHhCCCCeEeccHHHHHHHHHh
Confidence 14688999999999998886433 445555555544
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=244.52 Aligned_cols=203 Identities=21% Similarity=0.225 Sum_probs=163.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.... +.++.++.+|++|.+++++++++
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999888887777776443 45788999999999999988875
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||...+. .+.+.++++.++++|+.|++.+++.++|.|++++ .++||++||..+......+
T Consensus 91 ~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~---~~~iV~vSS~~~~~~~~~~--- 162 (306)
T PRK06197 91 AAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP---GSRVVTVSSGGHRIRAAIH--- 162 (306)
T ss_pred hhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC---CCEEEEECCHHHhccCCCC---
Confidence 47899999999986543 3467788999999999999999999999998765 5799999998754310000
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEE--cCCCCCCCChh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLI--FPPDTETPGLE 264 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V--~PG~v~T~~~~ 264 (366)
+.......++.+...|++||+|++++++.++.+++++|++|+++ +||+|+|++.+
T Consensus 163 -----------------------~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~ 219 (306)
T PRK06197 163 -----------------------FDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELAR 219 (306)
T ss_pred -----------------------ccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccc
Confidence 00000011122334899999999999999999999889887765 79999999876
Q ss_pred h
Q 017757 265 E 265 (366)
Q Consensus 265 ~ 265 (366)
.
T Consensus 220 ~ 220 (306)
T PRK06197 220 N 220 (306)
T ss_pred c
Confidence 4
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=237.74 Aligned_cols=237 Identities=19% Similarity=0.213 Sum_probs=184.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++++|+++||||+||||++++++|+++|++|++++|+.+ ..+...++++.. +.++.++++|+++++++++++++
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-GGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999999753 455555555543 55788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++.+|++|||||...... .+++..+++|+.+++++++++.|+|.+ .++||++||..+...+.
T Consensus 82 ~~~~d~vi~~ag~~~~~~------~~~~~~~~vn~~~~~~l~~~~~~~~~~-----~~~iv~isS~~~~~~~~------- 143 (248)
T PRK07806 82 FGGLDALVLNASGGMESG------MDEDYAMRLNRDAQRNLARAALPLMPA-----GSRVVFVTSHQAHFIPT------- 143 (248)
T ss_pred CCCCcEEEECCCCCCCCC------CCcceeeEeeeHHHHHHHHHHHhhccC-----CceEEEEeCchhhcCcc-------
Confidence 468999999998643211 124568999999999999999999864 46999999965431000
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
.++.+.+. .|++||++++.++++++.|+++.||+||+|+||++.|++......
T Consensus 144 ----------~~~~~~~~-----------------~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~ 196 (248)
T PRK07806 144 ----------VKTMPEYE-----------------PVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLN 196 (248)
T ss_pred ----------ccCCcccc-----------------HHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhc
Confidence 00223344 899999999999999999999999999999999999986544221
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ..++...+ ...+.++++.++|++..+.|++ + +.+++|+++.++||-.
T Consensus 197 ~--------------~~~~~~~~---~~~~~~~~~~~~dva~~~~~l~----~--~~~~~g~~~~i~~~~~ 244 (248)
T PRK07806 197 R--------------LNPGAIEA---RREAAGKLYTVSEFAAEVARAV----T--APVPSGHIEYVGGADY 244 (248)
T ss_pred c--------------CCHHHHHH---HHhhhcccCCHHHHHHHHHHHh----h--ccccCccEEEecCccc
Confidence 1 12232211 2357789999999999999999 4 5688999999999854
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=261.27 Aligned_cols=217 Identities=28% Similarity=0.401 Sum_probs=185.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||+++||||++|||++++++|+++|++|++++|+++.+++..+++... +.++.++.+|++|.+++++++++
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK-GGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999999888888777654 56789999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQ--SLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~--~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||......+.+. +.+++++++++|+.+++.+++.++|.|++++ .++||++||.++..
T Consensus 446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~-------- 514 (657)
T PRK07201 446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR---FGHVVNVSSIGVQT-------- 514 (657)
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CCEEEEECChhhcC--------
Confidence 5789999999998655444332 3688999999999999999999999998875 57999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.+... .|++||+|+++++++++.|++++||+||+|+||+|+|++....
T Consensus 515 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~ 563 (657)
T PRK07201 515 --------------NAPRFS-----------------AYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT 563 (657)
T ss_pred --------------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc
Confidence 666667 9999999999999999999999999999999999999987542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
... .....++|+++++.++..+..++
T Consensus 564 ~~~---------~~~~~~~~~~~a~~i~~~~~~~~ 589 (657)
T PRK07201 564 KRY---------NNVPTISPEEAADMVVRAIVEKP 589 (657)
T ss_pred ccc---------cCCCCCCHHHHHHHHHHHHHhCC
Confidence 110 11235799999999998876553
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-30 Score=240.25 Aligned_cols=202 Identities=29% Similarity=0.413 Sum_probs=168.7
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
...++++++++||||++|||+++|++|+++|++|++.+|+.++.++++++++.. ...++.++++|+++.++|+++.+++
T Consensus 29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~ 108 (314)
T KOG1208|consen 29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF 108 (314)
T ss_pred ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 346788999999999999999999999999999999999999999999999873 3468899999999999999998874
Q ss_pred ----CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 110 ----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 110 ----~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
+++|++|||||+..+.. ..+.|++|.+|++|+.|+|.+++.++|.|+++. ++|||++||..+ ...+.
T Consensus 109 ~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~---~~RIV~vsS~~~-~~~~~--- 179 (314)
T KOG1208|consen 109 KKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSA---PSRIVNVSSILG-GGKID--- 179 (314)
T ss_pred HhcCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCC---CCCEEEEcCccc-cCccc---
Confidence 78999999999987655 668899999999999999999999999999876 589999999886 21111
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
..+.+++.. +. +....+|+.||-|...+++.|++++.+ ||.+++++||.|.|+...
T Consensus 180 ~~~l~~~~~-----~~-----------------~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~ 235 (314)
T KOG1208|consen 180 LKDLSGEKA-----KL-----------------YSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLS 235 (314)
T ss_pred hhhccchhc-----cC-----------------ccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCccccccee
Confidence 111111110 00 122227999999999999999999988 999999999999999443
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=231.65 Aligned_cols=210 Identities=27% Similarity=0.280 Sum_probs=186.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHH-HHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAV-KTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v-~~~~~~~--~~i 112 (366)
.|++++|||||.|||++.|++||++|.+|++++|++++++.+++|+.+.++.++.++.+|.++.+.+ +++.+.. ..+
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 3599999999999999999999999999999999999999999999999899999999999998873 4444443 257
Q ss_pred cEEEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 113 DVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 113 d~vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
.++|||+|... |..+.+.+.+.+++.+.+|..+...+++.++|.|.+++ .|-|+++||.++..
T Consensus 128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~---~G~IvnigS~ag~~------------ 192 (312)
T KOG1014|consen 128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK---KGIIVNIGSFAGLI------------ 192 (312)
T ss_pred EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC---CceEEEeccccccc------------
Confidence 78999999876 67888888889999999999999999999999999976 78999999999988
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.|..+ .|++||+.+..++++|+.|+..+||.|-+|.|.+|.|+|......
T Consensus 193 ----------p~p~~s-----------------~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~-- 243 (312)
T KOG1014|consen 193 ----------PTPLLS-----------------VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKP-- 243 (312)
T ss_pred ----------cChhHH-----------------HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCC--
Confidence 888888 999999999999999999999999999999999999998765321
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhh
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~ 298 (366)
.....+|+.+++..++.+.
T Consensus 244 ---------sl~~ps~~tfaksal~tiG 262 (312)
T KOG1014|consen 244 ---------SLFVPSPETFAKSALNTIG 262 (312)
T ss_pred ---------CCcCcCHHHHHHHHHhhcC
Confidence 1224589999999887765
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=233.42 Aligned_cols=188 Identities=27% Similarity=0.339 Sum_probs=166.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+++.|+++||||+++||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|+++++++++++++ +
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-GGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 577899999999999999999999999999999999888777766666543 45788999999999999988876 4
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||........+.+++++++.+++|+.+++++++.++|.|+++. .++||++||..+..
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~---~g~iv~isS~~~~~----------- 151 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR---RGDLIFVGSDVALR----------- 151 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CceEEEECChHhcC-----------
Confidence 7899999999987777777889999999999999999999999999998765 57999999987765
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.+... .|+++|+++++++++++.++.+.||+|++|+||+++|++..
T Consensus 152 -----------~~~~~~-----------------~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~ 198 (274)
T PRK07775 152 -----------QRPHMG-----------------AYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW 198 (274)
T ss_pred -----------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence 555556 89999999999999999999999999999999999998643
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=239.97 Aligned_cols=220 Identities=22% Similarity=0.262 Sum_probs=162.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
.+|+++||||++|||+++|++|+++| ++|++++|+.++++++.+++... +.++.++.+|++|.+++++++++ ++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP-KDSYTIMHLDLGSLDSVRQFVQQFRESGR 80 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 58899999999999999999999999 99999999998888777776532 45788899999999999988876 47
Q ss_pred CCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc-C-cc
Q 017757 111 PVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT-N-MK 187 (366)
Q Consensus 111 ~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~-~-~~ 187 (366)
++|++|||||+..+ ....+.+.++|++++++|+.+++++++.++|+|++++. ..++||++||.++........ . ..
T Consensus 81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~g~IV~vsS~~~~~~~~~~~~~~~~ 159 (314)
T TIGR01289 81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN-KDKRLIIVGSITGNTNTLAGNVPPKA 159 (314)
T ss_pred CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC-CCCeEEEEecCccccccCCCcCCCcc
Confidence 89999999997543 23346789999999999999999999999999987532 147999999998754110000 0 00
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc-cCCcEEEEEcCCCC-CCCChhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI-ADDIHVSLIFPPDT-ETPGLEE 265 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~Vn~V~PG~v-~T~~~~~ 265 (366)
.+.+-.... .+.. +........++.+..+|++||+|+..+++.+++++. +.||+|++|+||+| .|++.+.
T Consensus 160 ~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~ 231 (314)
T TIGR01289 160 NLGDLSGLA---AGFK-----APIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFRE 231 (314)
T ss_pred ccccccccc---ccCC-----CcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccc
Confidence 000000000 0000 000000111233445899999999999999999985 46999999999999 6998653
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=231.97 Aligned_cols=233 Identities=32% Similarity=0.446 Sum_probs=196.8
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCcE
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVDV 114 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id~ 114 (366)
+||||++++||.+++++|+++|++|++++|+. +.++...+.++.. +.++.++.+|++|++++++++++ ++++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-GVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 58999999999999999999999999999875 4455555555433 55788999999999999888765 478999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
+|||||......+.+.+.+++++++++|+.+++.+++.+.+++.+.+ .++++++||..+..
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~~v~~sS~~~~~---------------- 140 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR---SGRIINISSVVGLM---------------- 140 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CeEEEEECCccccC----------------
Confidence 99999987666677788999999999999999999999999987654 57999999988776
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcch
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~ 274 (366)
+.+... .|+++|++++.+++.++.++...|+++++++||.++|++....
T Consensus 141 ------g~~~~~-----------------~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~-------- 189 (239)
T TIGR01830 141 ------GNAGQA-----------------NYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL-------- 189 (239)
T ss_pred ------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc--------
Confidence 656666 8999999999999999999999999999999999999864321
Q ss_pred hhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 275 SIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 275 ~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
+......+...++.++++.++|++..+.+++ ++...+++|+.+.+|+|+
T Consensus 190 -----------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~~~~g~~~~~~~g~ 238 (239)
T TIGR01830 190 -----------SEKVKKKILSQIPLGRFGTPEEVANAVAFLA----SDEASYITGQVIHVDGGM 238 (239)
T ss_pred -----------ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHh----CcccCCcCCCEEEeCCCc
Confidence 1233444556677788999999999999998 777788999999999885
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=228.41 Aligned_cols=186 Identities=30% Similarity=0.403 Sum_probs=165.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
+++++||||+||||++++++|+++|++|++++|+..+.++..+++... +.++.++.+|++|.+++++++++ ++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-GGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999999999988877777766554 56788999999999999888775 4789
Q ss_pred cEEEEcCCCCCCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 113 DVLVVNQGVFVPGELEVQ-SLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
|++|||||......+.+. +.+++++.+++|+.+++.+++.+.|+|.++ .+++|++||..+..
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~iv~~sS~~~~~------------- 142 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS----RGQIVVVSSLAGLT------------- 142 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCEEEEEecccccC-------------
Confidence 999999998877777777 999999999999999999999999998764 47999999988765
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|+++|+++++++++++.++.+++|++++|.||.+.|++.+..
T Consensus 143 ---------~~~~~~-----------------~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~ 191 (263)
T PRK06181 143 ---------GVPTRS-----------------GYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA 191 (263)
T ss_pred ---------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh
Confidence 555666 8999999999999999999999999999999999999987653
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=219.83 Aligned_cols=242 Identities=16% Similarity=0.143 Sum_probs=213.0
Q ss_pred cCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 33 IPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..|+||++||+|-. +.|+..||+.|.++|+++.+++.++ ++++..+++.+..+. ...++||+++.+++++++++
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS-DLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHHHHHH
Confidence 46899999999954 6999999999999999999999986 777777777665444 45789999999999999876
Q ss_pred --cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 --AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++||+-+.... +++.+++.|+|...+++...+...+.+++.|+|.+ .|+|+..+-..+..
T Consensus 80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~-----ggSiltLtYlgs~r---- 150 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN-----GGSILTLTYLGSER---- 150 (259)
T ss_pred HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC-----CCcEEEEEecccee----
Confidence 5899999999998763 57788999999999999999999999999999987 68999999888777
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
..|++. .-+.+|||++.-+|.||.+++++|||||+|+-|+|+|=-
T Consensus 151 ------------------~vPnYN-----------------vMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLA 195 (259)
T COG0623 151 ------------------VVPNYN-----------------VMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLA 195 (259)
T ss_pred ------------------ecCCCc-----------------hhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHH
Confidence 788888 889999999999999999999999999999999999864
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
.... ..-.++.+......|.+|..+.+||.+..+||+ |+-++-+||+++.||+|+...
T Consensus 196 asgI-----------------~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLl----SdLssgiTGei~yVD~G~~i~ 253 (259)
T COG0623 196 ASGI-----------------GDFRKMLKENEANAPLRRNVTIEEVGNTAAFLL----SDLSSGITGEIIYVDSGYHIM 253 (259)
T ss_pred hhcc-----------------ccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHh----cchhcccccceEEEcCCceee
Confidence 3332 234666777777889999999999999999999 999999999999999998754
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=217.05 Aligned_cols=181 Identities=25% Similarity=0.269 Sum_probs=162.2
Q ss_pred CCCEEEEEcCC-ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-----c
Q 017757 36 KDRHVFITGGS-SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-----A 109 (366)
Q Consensus 36 ~gk~vLITGas-~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-----~ 109 (366)
..|.++|||++ ||||.++|++|+++|+.|+.++|.-+...++..+ ..+..+.+|+++++++.++..+ .
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~------~gl~~~kLDV~~~~~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ------FGLKPYKLDVSKPEEVVTVSGEVRANPD 79 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh------hCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence 45788888865 7999999999999999999999998876665432 2478899999999999888665 4
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
|++|.++||||.....+..|.+.++.+++|++|+.|++.++|++...+.+. .|.||+++|.++..
T Consensus 80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika----KGtIVnvgSl~~~v----------- 144 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA----KGTIVNVGSLAGVV----------- 144 (289)
T ss_pred CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc----cceEEEecceeEEe-----------
Confidence 899999999999888888999999999999999999999999999766665 48999999999998
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.|..+ .|++||||+.++++.|+.|++|+||+|..+.||.|.|++.++
T Consensus 145 -----------pfpf~~-----------------iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 145 -----------PFPFGS-----------------IYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred -----------ccchhh-----------------hhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 888888 999999999999999999999999999999999999998665
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-29 Score=226.45 Aligned_cols=217 Identities=20% Similarity=0.239 Sum_probs=174.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-----c---
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-----A--- 109 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-----~--- 109 (366)
++++||||+||||++++++|+++|++|++++|+.++. . ....+.++.++++|+++.+++++++++ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence 3799999999999999999999999999999986531 1 112255788999999999999986544 2
Q ss_pred CCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||...+ .++.+.+.+++++.+++|+.+++.+++.+.+.|.+++ .++||++||..+..
T Consensus 76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~---------- 142 (243)
T PRK07023 76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA---ERRILHISSGAARN---------- 142 (243)
T ss_pred CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC---CCEEEEEeChhhcC----------
Confidence 479999999998764 5677789999999999999999999999999998754 57999999988765
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|+++|+++++++++++.+ .+.||++++|+||+++|++......
T Consensus 143 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~ 192 (243)
T PRK07023 143 ------------AYAGWS-----------------VYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRA 192 (243)
T ss_pred ------------CCCCch-----------------HHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHh
Confidence 666666 9999999999999999999 8889999999999999997654321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchh-HHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEG-FLLSIA 316 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~-~~~~L~ 316 (366)
.... ..+ ..+.+....+.++...|+|++. .+.+|.
T Consensus 193 ~~~~------------~~~-~~~~~~~~~~~~~~~~~~~va~~~~~~l~ 228 (243)
T PRK07023 193 TDEE------------RFP-MRERFRELKASGALSTPEDAARRLIAYLL 228 (243)
T ss_pred cccc------------cch-HHHHHHHhhhcCCCCCHHHHHHHHHHHHh
Confidence 1100 001 1223444567788899999988 566776
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-28 Score=224.65 Aligned_cols=182 Identities=33% Similarity=0.480 Sum_probs=160.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
.|++|||||+|+||++++++|+++|++|++++|+.+.+++..+.. +.++.++++|++|.+++++++++ ++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999987665544432 44788999999999999888765 5789
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+||||||........+.+.+++++.+++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~-------------- 140 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG---GGRIVQVSSEGGQI-------------- 140 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCEEEEEcCccccc--------------
Confidence 9999999998877788889999999999999999999999999998765 57999999987765
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.+... .|++||+++++++++++.++.++||+++.|+||.+.|++..
T Consensus 141 --------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~ 187 (276)
T PRK06482 141 --------AYPGFS-----------------LYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGA 187 (276)
T ss_pred --------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcc
Confidence 555566 99999999999999999999999999999999999998754
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=218.74 Aligned_cols=214 Identities=37% Similarity=0.467 Sum_probs=177.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+.+.+++++||||+|+||++++++|+++|++|++++|+++++++..+++... .++.++++|+++.+++++++++
T Consensus 2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999988877777766543 5688999999999999888775
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||+|......+.+.+.+++++++++|+.+++.+++++++.+++ + .++||++||.++..
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~---~~~iv~~ss~~~~~---------- 145 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-G---GGYIINISSLAGTN---------- 145 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-C---CeEEEEECChhhcc----------
Confidence 478999999999887777788899999999999999999999999999843 2 47999999987765
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|+++|+++.++++.++.|+.+.|+++++|+||.+.|++......
T Consensus 146 ------------~~~~~~-----------------~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~ 196 (237)
T PRK07326 146 ------------FFAGGA-----------------AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS 196 (237)
T ss_pred ------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc
Confidence 444555 899999999999999999999999999999999999986543211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
.. ....++++++++.+...+...
T Consensus 197 ~~---------~~~~~~~~d~a~~~~~~l~~~ 219 (237)
T PRK07326 197 EK---------DAWKIQPEDIAQLVLDLLKMP 219 (237)
T ss_pred hh---------hhccCCHHHHHHHHHHHHhCC
Confidence 00 001256777777777666544
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=224.29 Aligned_cols=231 Identities=24% Similarity=0.301 Sum_probs=185.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++++|+++||||+++||.++++.|+++|++|++++|+.++.+++.+++.. ..++.++++|+++++++++++++
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK--YGNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999998877666555543 23678899999999999988765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|.+|+|+|......+. +.+++++++++|+.+++.+++.++|.+++ .+++|++||..+...
T Consensus 79 ~~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~~ss~~~~~~--------- 142 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE-----GSSIVLVSSMSGIYK--------- 142 (238)
T ss_pred hCCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc-----CCEEEEEecchhccc---------
Confidence 46799999999976544433 34889999999999999999999999865 468999999766320
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|++||++++.++++++.++.+.||++++|+||++.|++....
T Consensus 143 ------------~~~~~~-----------------~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-- 191 (238)
T PRK05786 143 ------------ASPDQL-----------------SYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-- 191 (238)
T ss_pred ------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh--
Confidence 233344 8999999999999999999999999999999999999864221
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
... .. .. ..++...+++++..+.+++ ++.+.+++|+.+.+|||.
T Consensus 192 -------------------~~~-~~-~~-~~~~~~~~~~va~~~~~~~----~~~~~~~~g~~~~~~~~~ 235 (238)
T PRK05786 192 -------------------NWK-KL-RK-LGDDMAPPEDFAKVIIWLL----TDEADWVDGVVIPVDGGA 235 (238)
T ss_pred -------------------hhh-hh-cc-ccCCCCCHHHHHHHHHHHh----cccccCccCCEEEECCcc
Confidence 000 00 00 0124566778888888998 888889999999999874
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-28 Score=230.40 Aligned_cols=223 Identities=22% Similarity=0.260 Sum_probs=163.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--- 109 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--- 109 (366)
+.+++|+++||||++|||++++++|+++|++|++++|+.++++++.+++.. .+.++.++.+|++|.+++++++++.
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-PPDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-cCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999999999999888887777743 2457889999999999999888763
Q ss_pred -CCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc-c---
Q 017757 110 -GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK-N--- 183 (366)
Q Consensus 110 -~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~-~--- 183 (366)
+++|++|||||+..+ ....+.+.++++.++++|+.|++++++.++|.|++++.+ .++||++||......... .
T Consensus 81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~~riV~vsS~~~~~~~~~~~~~~ 159 (322)
T PRK07453 81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP-DPRLVILGTVTANPKELGGKIPI 159 (322)
T ss_pred CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-CceEEEEcccccCccccCCccCC
Confidence 579999999998654 233467899999999999999999999999999876421 369999999875431000 0
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc-cCCcEEEEEcCCCC-CCC
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI-ADDIHVSLIFPPDT-ETP 261 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~Vn~V~PG~v-~T~ 261 (366)
.....+.+....+ ... .. +. +.....++.+...|+.||.|...+++.+++++. .+||+||+|+||.| .|+
T Consensus 160 ~~~~~~~~~~~~~---~~~-~~---~~-~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 160 PAPADLGDLSGFE---AGF-KA---PI-SMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred CCccchhhhhcch---hcc-cc---cc-cccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 0000000000000 000 00 00 000011223345899999999999999999995 46999999999999 588
Q ss_pred Chhh
Q 017757 262 GLEE 265 (366)
Q Consensus 262 ~~~~ 265 (366)
+.++
T Consensus 232 ~~~~ 235 (322)
T PRK07453 232 LFRN 235 (322)
T ss_pred cccc
Confidence 7554
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-28 Score=220.61 Aligned_cols=203 Identities=19% Similarity=0.183 Sum_probs=155.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
..++++|+++||||++|||+++|++|+++|++|++++|+.....+ ... . + ....+.+|++|.+++++. +++
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~~--~-~-~~~~~~~D~~~~~~~~~~---~~~ 79 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SND--E-S-PNEWIKWECGKEESLDKQ---LAS 79 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hhc--c-C-CCeEEEeeCCCHHHHHHh---cCC
Confidence 456889999999999999999999999999999999998632111 111 1 1 125788999999988754 458
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||.... .+.+.+++++++++|+.+++++++.++|.|++++....+.++..+|.++..
T Consensus 80 iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~------------- 143 (245)
T PRK12367 80 LDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ------------- 143 (245)
T ss_pred CCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-------------
Confidence 9999999997533 346899999999999999999999999999874321133454555655432
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHH---HHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGL---AEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l---~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+ +... .|++||+|+..+ .+.++.|+.+.|++|++++||+++|++...
T Consensus 144 ---------~-~~~~-----------------~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~--- 193 (245)
T PRK12367 144 ---------P-ALSP-----------------SYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPI--- 193 (245)
T ss_pred ---------C-CCCc-----------------hhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCcc---
Confidence 2 2334 799999998544 455555667889999999999999986311
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCe
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSF 302 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~ 302 (366)
..++|+++++.++..+..++.
T Consensus 194 -------------~~~~~~~vA~~i~~~~~~~~~ 214 (245)
T PRK12367 194 -------------GIMSADFVAKQILDQANLGLY 214 (245)
T ss_pred -------------CCCCHHHHHHHHHHHHhcCCc
Confidence 146899999999999998876
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=231.80 Aligned_cols=231 Identities=21% Similarity=0.162 Sum_probs=168.2
Q ss_pred HHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcEEEEcCCCCCCCCccCCC
Q 017757 53 LAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVLVVNQGVFVPGELEVQS 131 (366)
Q Consensus 53 ia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~vi~nAG~~~~~~~~~~~ 131 (366)
+|++|+++|++|++++|+.++.+. ..++++|++|.+++++++++. +++|++|||||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~------------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~------- 61 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTL------------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT------- 61 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhh------------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC-------
Confidence 478999999999999998765321 235789999999999999885 689999999997532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCccccccc
Q 017757 132 LDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211 (366)
Q Consensus 132 ~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (366)
+++++++++|+.+++++++.++|+|++ .++||++||.++...+......+...+ +. +... . .+
T Consensus 62 -~~~~~~~~vN~~~~~~l~~~~~~~~~~-----~g~Iv~isS~~~~~~~~~~~~~~~~~~-~~-~~~~-~------~~-- 124 (241)
T PRK12428 62 -APVELVARVNFLGLRHLTEALLPRMAP-----GGAIVNVASLAGAEWPQRLELHKALAA-TA-SFDE-G------AA-- 124 (241)
T ss_pred -CCHHHhhhhchHHHHHHHHHHHHhccC-----CcEEEEeCcHHhhccccchHHHHhhhc-cc-hHHH-H------HH--
Confidence 347899999999999999999999964 479999999987641100000000000 00 0000 0 00
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHH-hHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHH
Q 017757 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQ-QEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVA 290 (366)
Q Consensus 212 ~~~~~~~~~~~~~Y~asKaal~~l~~~la-~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 290 (366)
.....+.++...|++||+|+.+++++++ .|+.++|||||+|+||.++|++....... ...+...
T Consensus 125 -~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~--------------~~~~~~~ 189 (241)
T PRK12428 125 -WLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM--------------LGQERVD 189 (241)
T ss_pred -hhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhh--------------hhhHhhh
Confidence 0000123344499999999999999999 99999999999999999999986542110 0011111
Q ss_pred HHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 291 KKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 291 ~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
+ ...+.+|+.+|+|++..+.||+ ++.+.++||+++.+|||+...
T Consensus 190 ~---~~~~~~~~~~pe~va~~~~~l~----s~~~~~~~G~~i~vdgg~~~~ 233 (241)
T PRK12428 190 S---DAKRMGRPATADEQAAVLVFLC----SDAARWINGVNLPVDGGLAAT 233 (241)
T ss_pred h---cccccCCCCCHHHHHHHHHHHc----ChhhcCccCcEEEecCchHHH
Confidence 1 2346788999999999999999 999999999999999998754
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-28 Score=209.90 Aligned_cols=208 Identities=28% Similarity=0.353 Sum_probs=166.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-CCeE-EEEecCchhHHHHHHHHHh--hcCCeEEEEEecCCCHHHHHHHHHhc--
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKE-GARV-SILARSGKKLEEAKQSIQL--ATGIEVATYSADVRDFDAVKTALDEA-- 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~-G~~V-~l~~r~~~~~~~~~~~l~~--~~~~~v~~~~~Dls~~~~v~~~~~~~-- 109 (366)
.-|.++||||++|||..++++|.+. |-++ +.+.|++++. .++++. ....+++.+++|+++.+++.+++++.
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~ 78 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEK 78 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHh
Confidence 3456999999999999999999986 5554 4556667764 233322 23679999999999999999999884
Q ss_pred ----CCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------CCcEEEEecCCcc
Q 017757 110 ----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNG--------GPASIALMSSQAG 176 (366)
Q Consensus 110 ----~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~--------~~g~iv~vsS~~~ 176 (366)
..+|++|||||+..+ ....+.+.+.|.+++++|..|++++.|+++|++++.... .+..||++||..+
T Consensus 79 iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~ 158 (249)
T KOG1611|consen 79 IVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG 158 (249)
T ss_pred hcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc
Confidence 578999999998765 455567889999999999999999999999999986532 3457999999887
Q ss_pred ccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC
Q 017757 177 QCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP 256 (366)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG 256 (366)
... ........ +|.+||+|+++++|+++.|+.+.+|-|..+|||
T Consensus 159 s~~-------------------~~~~~~~~-----------------AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPG 202 (249)
T KOG1611|consen 159 SIG-------------------GFRPGGLS-----------------AYRMSKAALNMFAKSLSVDLKDDHILVVSIHPG 202 (249)
T ss_pred ccC-------------------CCCCcchh-----------------hhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCC
Confidence 530 00112233 999999999999999999999999999999999
Q ss_pred CCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhh
Q 017757 257 DTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGI 297 (366)
Q Consensus 257 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 297 (366)
+|.|+|-... ..+++|+.+..+++.+
T Consensus 203 wV~TDMgg~~---------------a~ltveeSts~l~~~i 228 (249)
T KOG1611|consen 203 WVQTDMGGKK---------------AALTVEESTSKLLASI 228 (249)
T ss_pred eEEcCCCCCC---------------cccchhhhHHHHHHHH
Confidence 9999987632 2468898888887766
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=218.84 Aligned_cols=183 Identities=23% Similarity=0.271 Sum_probs=162.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+|++|||||+||||++++++|+++|++|++++|+.+..++..+..... +.++.++.+|++|+++++++++ +++|++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~id~vi 78 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-GLALRVEKLDLTDAIDRAQAAE--WDVDVLL 78 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeeCCCHHHHHHHhc--CCCCEEE
Confidence 679999999999999999999999999999999987776665554433 4568899999999999988765 3799999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
||||.....++.+.+.+++++.+++|+.+++.+++.+++.+++++ .++||++||..+..
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~~SS~~~~~------------------ 137 (257)
T PRK09291 79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG---KGKVVFTSSMAGLI------------------ 137 (257)
T ss_pred ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CceEEEEcChhhcc------------------
Confidence 999998888888899999999999999999999999999998865 47999999988765
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||++++++++.++.++.+.||++++|+||++.|++..
T Consensus 138 ----~~~~~~-----------------~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~ 184 (257)
T PRK09291 138 ----TGPFTG-----------------AYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND 184 (257)
T ss_pred ----CCCCcc-----------------hhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence 555555 89999999999999999999999999999999999998754
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=216.75 Aligned_cols=202 Identities=21% Similarity=0.274 Sum_probs=165.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVL 115 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~v 115 (366)
|+++||||++|||++++++|+++|++|++++|++++.+++. ++ .++.+..+|++|++++++++++. +++|++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~d~~~~~~~~~~~~~~~id~v 75 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL-----PGVHIEKLDMNDPASLDQLLQRLQGQRFDLL 75 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc-----cccceEEcCCCCHHHHHHHHHHhhcCCCCEE
Confidence 78999999999999999999999999999999987655432 11 25677889999999999999875 479999
Q ss_pred EEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 116 VVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 116 i~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
|||||...+ .++.+.+.+++++.+++|+.+++.++++++|.+++. .++++++||..+...
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~iv~~ss~~g~~~-------------- 137 (225)
T PRK08177 76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG----QGVLAFMSSQLGSVE-------------- 137 (225)
T ss_pred EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc----CCEEEEEccCccccc--------------
Confidence 999998643 456778999999999999999999999999999753 378999999876530
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
.++..... .|+++|++++.++++++.|+.++||+||+|+||+++|++....
T Consensus 138 -----~~~~~~~~-----------------~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~------- 188 (225)
T PRK08177 138 -----LPDGGEMP-----------------LYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN------- 188 (225)
T ss_pred -----cCCCCCcc-----------------chHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC-------
Confidence 00112333 7999999999999999999999999999999999999985431
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
...++++.++.+++.+...
T Consensus 189 --------~~~~~~~~~~~~~~~~~~~ 207 (225)
T PRK08177 189 --------APLDVETSVKGLVEQIEAA 207 (225)
T ss_pred --------CCCCHHHHHHHHHHHHHhC
Confidence 1246677777777766444
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=204.72 Aligned_cols=159 Identities=37% Similarity=0.576 Sum_probs=145.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC--chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARS--GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~--~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
|+++||||++|||++++++|+++|+ +|++++|+ .+..++..+++... +.++.++++|+++++++++++++ .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP-GAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-TSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc-ccccccccccccccccccccccccccccc
Confidence 7899999999999999999999965 68899998 67777887888754 58999999999999999998876 47
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||......+.+.+.+++++++++|+.+++++.+.++| + + .++||++||..+..
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~--~---~g~iv~~sS~~~~~------------ 140 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--Q--G---GGKIVNISSIAGVR------------ 140 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--H--T---TEEEEEEEEGGGTS------------
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehhee--c--c---ccceEEecchhhcc------------
Confidence 999999999999888999999999999999999999999999999 2 2 68999999999988
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHh
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV 243 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~ 243 (366)
+.++.. .|++||+|+++|+++++.|+
T Consensus 141 ----------~~~~~~-----------------~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 141 ----------GSPGMS-----------------AYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp ----------SSTTBH-----------------HHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCCCCh-----------------hHHHHHHHHHHHHHHHHHhc
Confidence 888888 99999999999999999997
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-27 Score=214.12 Aligned_cols=216 Identities=26% Similarity=0.301 Sum_probs=173.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-----CC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-----GP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-----~~ 111 (366)
.|+++||||+|+||++++++|+++|++|++++|+.++++...+ ..+..+++|++|.+++++++++. ++
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 74 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-------LGFTGILLDLDDPESVERAADEVIALTDNR 74 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-------CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 3789999999999999999999999999999999876654321 13677899999999988877663 67
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|.+|||||.....++.+.+.+++++++++|+.|++.+++.++|.+++.+ .++|+++||.++..
T Consensus 75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~------------- 138 (256)
T PRK08017 75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG---EGRIVMTSSVMGLI------------- 138 (256)
T ss_pred CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC---CCEEEEEcCccccc-------------
Confidence 99999999987777778889999999999999999999999999998865 57999999988776
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.+... .|++||++++.++++++.++.++|+++++|+||.+.|++.........
T Consensus 139 ---------~~~~~~-----------------~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~ 192 (256)
T PRK08017 139 ---------STPGRG-----------------AYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQS 192 (256)
T ss_pred ---------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhh
Confidence 666666 899999999999999999999999999999999999987664322110
Q ss_pred cchhhhh--ccCCCCCHHHHHHHHHhhhhCCC
Q 017757 272 RLTSIIA--ASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 272 ~~~~~~~--~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
....... .....++++++++.+...+..++
T Consensus 193 ~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 193 DKPVENPGIAARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred ccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence 0000000 01124677777777777776654
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=203.40 Aligned_cols=212 Identities=26% Similarity=0.399 Sum_probs=169.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+.|+++||||+|+||++++++|+++ ++|++++|+.++.++..++. ..+.++++|++|++++++++++++++|++
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id~v 75 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQLGRLDVL 75 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence 3579999999999999999999999 99999999977655443322 25778999999999999999988889999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||++|......+.+.+.+++++++++|+.+++.+.+.+++.++++ .++++++||..+..
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~v~~ss~~~~~----------------- 134 (227)
T PRK08219 76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA----HGHVVFINSGAGLR----------------- 134 (227)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCeEEEEcchHhcC-----------------
Confidence 999998777777788999999999999999999999999999875 36999999988765
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchh
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~ 275 (366)
+.++.. .|+.+|++++++++.++.++... |++++|.||.++|+...........
T Consensus 135 -----~~~~~~-----------------~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~--- 188 (227)
T PRK08219 135 -----ANPGWG-----------------SYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGG--- 188 (227)
T ss_pred -----cCCCCc-----------------hHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhcc---
Confidence 555555 89999999999999999988766 9999999999998865432211000
Q ss_pred hhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 276 IIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 276 ~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
.......++++++++.++..+..++
T Consensus 189 -~~~~~~~~~~~dva~~~~~~l~~~~ 213 (227)
T PRK08219 189 -EYDPERYLRPETVAKAVRFAVDAPP 213 (227)
T ss_pred -ccCCCCCCCHHHHHHHHHHHHcCCC
Confidence 0011123556666666665554443
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=201.94 Aligned_cols=199 Identities=22% Similarity=0.280 Sum_probs=160.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVL 115 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~v 115 (366)
|+++||||+++||++++++|+++|++|++++|+.+..++... ..+.++.+|+++.+++++++++. +++|++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~v 74 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-------LGAEALALDVADPASVAGLAWKLDGEALDAA 74 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-------ccceEEEecCCCHHHHHHHHHHhcCCCCCEE
Confidence 689999999999999999999999999999999776554321 13567899999999999988765 369999
Q ss_pred EEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 116 VVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 116 i~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
|||+|.... ....+.+.+++++++++|+.+++.++++++|+|.+. .++++++||..+..
T Consensus 75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iv~isS~~~~~--------------- 135 (222)
T PRK06953 75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA----GGVLAVLSSRMGSI--------------- 135 (222)
T ss_pred EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc----CCeEEEEcCccccc---------------
Confidence 999998642 445677999999999999999999999999998663 47899999987754
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
+..... ....|+++|++++++++.++.++ .+++||+|+||+++|++.+..
T Consensus 136 -------~~~~~~--------------~~~~Y~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~------- 185 (222)
T PRK06953 136 -------GDATGT--------------TGWLYRASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQ------- 185 (222)
T ss_pred -------ccccCC--------------CccccHHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCC-------
Confidence 211111 01169999999999999999986 479999999999999985431
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
..+++++.++.+...+...
T Consensus 186 --------~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 186 --------AALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred --------CCCCHHHHHHHHHHHHHhc
Confidence 1357788888888776544
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-24 Score=210.33 Aligned_cols=204 Identities=22% Similarity=0.229 Sum_probs=157.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++||+++||||+||||++++++|+++|++|++++|+.+++++.. ... ...+..+.+|++|++++.+.+. ++
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~-~~~v~~v~~Dvsd~~~v~~~l~---~I 246 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE-DLPVKTLHWQVGQEAALAELLE---KV 246 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc-CCCeEEEEeeCCCHHHHHHHhC---CC
Confidence 3578999999999999999999999999999999999876554322 111 2346788999999998877654 79
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CCcEEEEecCCccccccccccCccCccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNG-GPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
|++|||||.... .+.+.+++++++++|+.|++.++++++|.|++++.+ ..+.++++|+ ++.
T Consensus 247 DiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-------------- 308 (406)
T PRK07424 247 DILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-------------- 308 (406)
T ss_pred CEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc--------------
Confidence 999999997543 357899999999999999999999999999876532 2345666654 332
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
..+... .|++||+|+.+++. ++.+. .++.|..+.||+++|++..
T Consensus 309 ---------~~~~~~-----------------~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~------- 352 (406)
T PRK07424 309 ---------NPAFSP-----------------LYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP------- 352 (406)
T ss_pred ---------cCCCch-----------------HHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc-------
Confidence 223344 79999999999985 44443 4577778889999988632
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeC
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPC 306 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~ 306 (366)
...++||++|+.++..+..++.....
T Consensus 353 ---------~~~~spe~vA~~il~~i~~~~~~i~v 378 (406)
T PRK07424 353 ---------IGVMSADWVAKQILKLAKRDFRNIIV 378 (406)
T ss_pred ---------CCCCCHHHHHHHHHHHHHCCCCEEEe
Confidence 12479999999999999998755443
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=195.07 Aligned_cols=236 Identities=17% Similarity=0.166 Sum_probs=182.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
.+|++|+||+|+|||..++..+.+++...+..+++....+ .+.+.-..+........|++...-+..+++. .+.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk 82 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGK 82 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence 4678999999999999999999998877555555443332 1222222234445566677776655555443 578
Q ss_pred CcEEEEcCCCCCC-CCc--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 112 VDVLVVNQGVFVP-GEL--EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 112 id~vi~nAG~~~~-~~~--~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
.|++|||||...+ ... +..+.++|++.+++|+++.+-+.+.++|.+++++ ..+.+|++||.+...
T Consensus 83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p--~~~~vVnvSS~aav~---------- 150 (253)
T KOG1204|consen 83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP--VNGNVVNVSSLAAVR---------- 150 (253)
T ss_pred eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC--ccCeEEEecchhhhc----------
Confidence 9999999998765 222 3678999999999999999999999999999874 247999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .||.+|||.++|++.+|.|-- ++|+|.+++||.|||+|......
T Consensus 151 ------------p~~~wa-----------------~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~ 200 (253)
T KOG1204|consen 151 ------------PFSSWA-----------------AYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRE 200 (253)
T ss_pred ------------cccHHH-----------------HhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhh
Confidence 777777 999999999999999999965 79999999999999999876544
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
.. .++|+.. ....+....+++..|...+..+.+|+- .+.+++||.+.
T Consensus 201 ~~------------~~~p~~l-~~f~el~~~~~ll~~~~~a~~l~~L~e-----~~~f~sG~~vd 247 (253)
T KOG1204|consen 201 TS------------RMTPADL-KMFKELKESGQLLDPQVTAKVLAKLLE-----KGDFVSGQHVD 247 (253)
T ss_pred cc------------CCCHHHH-HHHHHHHhcCCcCChhhHHHHHHHHHH-----hcCcccccccc
Confidence 32 3677766 467777889999999999999999972 22277777543
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-23 Score=236.38 Aligned_cols=180 Identities=21% Similarity=0.212 Sum_probs=153.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCch------------------------------------------
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGK------------------------------------------ 72 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~------------------------------------------ 72 (366)
+|+++|||||++|||+++|++|+++ |++|++++|+..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5899999999999999999999998 699999999820
Q ss_pred -----hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHH
Q 017757 73 -----KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA---GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIT 144 (366)
Q Consensus 73 -----~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~---~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~ 144 (366)
+.++..+++.. .+.++.++.||++|.+++++++++. +++|+||||||+.....+.+.+.++|++++++|+.
T Consensus 2076 ~~~~~ei~~~la~l~~-~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKA-AGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred cchhHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence 11112222322 3678999999999999999988764 57999999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccch
Q 017757 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLL 224 (366)
Q Consensus 145 ~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
|.+++++++.+.+ .++||++||+++.. +.++.. .
T Consensus 2155 G~~~Ll~al~~~~-------~~~IV~~SSvag~~----------------------G~~gqs-----------------~ 2188 (2582)
T TIGR02813 2155 GLLSLLAALNAEN-------IKLLALFSSAAGFY----------------------GNTGQS-----------------D 2188 (2582)
T ss_pred HHHHHHHHHHHhC-------CCeEEEEechhhcC----------------------CCCCcH-----------------H
Confidence 9999998886643 34899999999987 777777 9
Q ss_pred hhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 225 WIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 225 Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
|+++|++++++++.++.++. +++|++|+||+++|+|..
T Consensus 2189 YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2189 YAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence 99999999999999999874 599999999999998753
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-21 Score=165.27 Aligned_cols=171 Identities=26% Similarity=0.333 Sum_probs=140.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHH---HHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAK---QSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~---~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
|+++||||++|||++++++|+++|+ .|++++|+.+..+... ++++. .+.++.++.+|+++++++++++++ +
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRAALAAALAAIPARL 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999999999997 5888888765543322 33332 256788999999999999888765 4
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||......+.+.+.++++.++++|+.+++.+++.+.+ .+ .++++++||..+..
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~~~ii~~ss~~~~~----------- 141 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP---LDFFVLFSSVAGVL----------- 141 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC---cceEEEEccHHHhc-----------
Confidence 7899999999987777778889999999999999999999998832 22 57999999988776
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.++.. .|+++|+++..+++.++. .|+++.++.||+++
T Consensus 142 -----------~~~~~~-----------------~y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~ 179 (180)
T smart00822 142 -----------GNPGQA-----------------NYAAANAFLDALAAHRRA----RGLPATSINWGAWA 179 (180)
T ss_pred -----------CCCCch-----------------hhHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence 555666 899999999998877654 58899999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-21 Score=192.10 Aligned_cols=208 Identities=16% Similarity=0.181 Sum_probs=153.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-----c---CCeEEEEEecCCCHHHHHHH
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-----T---GIEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-----~---~~~v~~~~~Dls~~~~v~~~ 105 (366)
..+||+++||||+|+||++++++|+++|++|++++|+.++++.+.+++... . ..++.++.+|++|.+++++.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 347899999999999999999999999999999999998887776655431 1 13588999999999998775
Q ss_pred HHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 106 LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 106 ~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
+. ++|+||||+|.... ...++...+++|+.+..++++++.+. + .++||++||..+...
T Consensus 157 Lg---giDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g---VgRIV~VSSiga~~~------ 214 (576)
T PLN03209 157 LG---NASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATVA----K---VNHFILVTSLGTNKV------ 214 (576)
T ss_pred hc---CCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHHh----C---CCEEEEEccchhccc------
Confidence 54 79999999996532 12246788999999999999888543 2 579999999865320
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.+ .. .|. +|+++..+.+.+..++...||++++|+||++.|++.+.
T Consensus 215 ---------------g~p-~~-----------------~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~ 260 (576)
T PLN03209 215 ---------------GFP-AA-----------------ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAY 260 (576)
T ss_pred ---------------Ccc-cc-----------------chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcccc
Confidence 111 01 243 78888888888888888899999999999999885432
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIA 316 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~ 316 (366)
. .. ... .........++.+..+|++..++||+
T Consensus 261 ~-~t-~~v-----------------~~~~~d~~~gr~isreDVA~vVvfLa 292 (576)
T PLN03209 261 K-ET-HNL-----------------TLSEEDTLFGGQVSNLQVAELMACMA 292 (576)
T ss_pred c-cc-cce-----------------eeccccccCCCccCHHHHHHHHHHHH
Confidence 1 00 000 00011234567777788888888887
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-20 Score=176.61 Aligned_cols=206 Identities=17% Similarity=0.145 Sum_probs=150.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++||++|||||+|+||++++++|+++| ++|++.+|+........+.+. ..++.++.+|++|.+++.++++ .+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~l~~~~~---~i 75 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKERLTRALR---GV 75 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHHHHHHHh---cC
Confidence 478999999999999999999999986 789999998665444333332 2468899999999999999887 58
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|||+||.... +..+.++ +.++++|+.++.++++++.+. + .++||++||.....
T Consensus 76 D~Vih~Ag~~~~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~~----~---~~~iV~~SS~~~~~-------------- 130 (324)
T TIGR03589 76 DYVVHAAALKQV-PAAEYNP---FECIRTNINGAQNVIDAAIDN----G---VKRVVALSTDKAAN-------------- 130 (324)
T ss_pred CEEEECcccCCC-chhhcCH---HHHHHHHHHHHHHHHHHHHHc----C---CCEEEEEeCCCCCC--------------
Confidence 999999997532 2222233 468999999999999998752 2 46999999954321
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh---hhhhh-
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL---EEENK- 268 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~---~~~~~- 268 (366)
... .|++||++.+.+++.++.++...|++++++.||.+.++.. .....
T Consensus 131 -----------p~~-----------------~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~ 182 (324)
T TIGR03589 131 -----------PIN-----------------LYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSL 182 (324)
T ss_pred -----------CCC-----------------HHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHH
Confidence 123 7999999999999999888888899999999999988631 11110
Q ss_pred --cCC-cchhh-hhccCCCCCHHHHHHHHHhhhhC
Q 017757 269 --RRP-RLTSI-IAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 269 --~~~-~~~~~-~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
... ...-. ......++.++++++.++..+..
T Consensus 183 ~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~ 217 (324)
T TIGR03589 183 KEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER 217 (324)
T ss_pred HHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence 000 00000 00011256889999988888754
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-19 Score=171.17 Aligned_cols=196 Identities=14% Similarity=0.144 Sum_probs=138.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++|++|||||+|+||++++++|+++|++|++++|+....++........ ...++.++.+|++|.++++++++ ++|+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~ 80 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID---GCET 80 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc---CCCE
Confidence 4799999999999999999999999999999999876654432222211 12468889999999999999887 6899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
||||||.... ..+.+++...+++|+.+++++++++.+.+. .++||++||..++..+..........++.
T Consensus 81 vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~------~~~iv~~SS~~~~~~~~~~~~~~~~~~E~- 149 (325)
T PLN02989 81 VFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVSS------VKRVILTSSMAAVLAPETKLGPNDVVDET- 149 (325)
T ss_pred EEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC------ceEEEEecchhheecCCccCCCCCccCcC-
Confidence 9999996432 224456788999999999999999876531 36999999987765221000000000000
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
.+..|.. .......|+.||.+.+.+++.++.++ |++++.+.|+.+.+|...
T Consensus 150 ----~~~~p~~------------~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~ 200 (325)
T PLN02989 150 ----FFTNPSF------------AEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQ 200 (325)
T ss_pred ----CCCchhH------------hcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCC
Confidence 0000000 00012379999999999988887654 899999999999888643
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-19 Score=172.10 Aligned_cols=188 Identities=14% Similarity=0.098 Sum_probs=141.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++||++|||||+|+||++++++|+++|++|++++|+.....+..+.+.. +.++.++.+|++|.+++.+++++. ++|+
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~ 78 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--AKKIEDHFGDIRDAAKLRKAIAEF-KPEI 78 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--cCCceEEEccCCCHHHHHHHHhhc-CCCE
Confidence 5789999999999999999999999999999999987654443333321 336778999999999999999876 5899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|||+|+.... ..+.+++...+++|+.+++++++++.+. + ..+++|++||...+..+. ....
T Consensus 79 vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~----~--~~~~iv~~SS~~vyg~~~---~~~~------ 139 (349)
T TIGR02622 79 VFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI----G--SVKAVVNVTSDKCYRNDE---WVWG------ 139 (349)
T ss_pred EEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc----C--CCCEEEEEechhhhCCCC---CCCC------
Confidence 9999995432 2355667788999999999999987431 1 135999999976543100 0000
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc----CCcEEEEEcCCCCCCCC
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA----DDIHVSLIFPPDTETPG 262 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~----~gI~Vn~V~PG~v~T~~ 262 (366)
..+..+..+...|++||++++.+++.++.++.+ .|++++++.|+.+.+|.
T Consensus 140 ------------------~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 140 ------------------YRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred ------------------CccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 000111122338999999999999999988765 48999999999999874
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.8e-20 Score=161.78 Aligned_cols=198 Identities=23% Similarity=0.277 Sum_probs=163.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-----EEEEecCchhHHHHHHHHHhhcC---CeEEEEEecCCCHHHHHHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-----VSILARSGKKLEEAKQSIQLATG---IEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-----V~l~~r~~~~~~~~~~~l~~~~~---~~v~~~~~Dls~~~~v~~~~~ 107 (366)
..|+++|||+++|||.++|++|.+...+ +++++|+-++++++...+...++ .++.++.+|+++..++.++.+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 3589999999999999999999998654 78899999999999999987665 478899999999999877764
Q ss_pred ----hcCCCcEEEEcCCCCCCCC---------------------------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 108 ----EAGPVDVLVVNQGVFVPGE---------------------------LEVQSLDEVRLMIDVNITGSFHMIKAALPL 156 (366)
Q Consensus 108 ----~~~~id~vi~nAG~~~~~~---------------------------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 156 (366)
++.++|.++.|||+..... .-..+.+++...|+.|+.|+|++.+.+.|+
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 4689999999999865432 113467889999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHH
Q 017757 157 IKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLA 236 (366)
Q Consensus 157 l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~ 236 (366)
+..+. ...+|.+||..+.. ++...+++.+.+ +.. +|..||.+..-|.
T Consensus 162 l~~~~---~~~lvwtSS~~a~k---k~lsleD~q~~k----------g~~-----------------pY~sSKrl~DlLh 208 (341)
T KOG1478|consen 162 LCHSD---NPQLVWTSSRMARK---KNLSLEDFQHSK----------GKE-----------------PYSSSKRLTDLLH 208 (341)
T ss_pred hhcCC---CCeEEEEeeccccc---ccCCHHHHhhhc----------CCC-----------------CcchhHHHHHHHH
Confidence 98766 34899999988754 333334444333 223 8999999999998
Q ss_pred HHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 237 EALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 237 ~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
-.+-+.+.+.|+.-++++||..-|.+....
T Consensus 209 ~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~ 238 (341)
T KOG1478|consen 209 VALNRNFKPLGINQYVVQPGIFTTNSFSEY 238 (341)
T ss_pred HHHhccccccchhhhcccCceeecchhhhh
Confidence 888889999999999999999999887653
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-18 Score=161.66 Aligned_cols=229 Identities=14% Similarity=0.143 Sum_probs=147.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh--HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK--LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~--~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
++=++|+++||||+|+||++++++|+++|++|+++.|+.+. .++....+.. .+.++.++.+|++|.+++.+++.
T Consensus 2 ~~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~~~~~l~--- 77 (297)
T PLN02583 2 FDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC-EEERLKVFDVDPLDYHSILDALK--- 77 (297)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc-CCCceEEEEecCCCHHHHHHHHc---
Confidence 34467899999999999999999999999999999996432 2222222221 13468889999999999988776
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc-cCccCc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN-TNMKGI 189 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~-~~~~~~ 189 (366)
..|.++|.++.... . .+++++++++|+.|++++++++.+.+. .++||++||.++....... .....+
T Consensus 78 ~~d~v~~~~~~~~~-----~-~~~~~~~~~~nv~gt~~ll~aa~~~~~------v~riV~~SS~~a~~~~~~~~~~~~~~ 145 (297)
T PLN02583 78 GCSGLFCCFDPPSD-----Y-PSYDEKMVDVEVRAAHNVLEACAQTDT------IEKVVFTSSLTAVIWRDDNISTQKDV 145 (297)
T ss_pred CCCEEEEeCccCCc-----c-cccHHHHHHHHHHHHHHHHHHHHhcCC------ccEEEEecchHheecccccCCCCCCC
Confidence 68999987753221 1 124678999999999999999976531 3699999998775411000 000000
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+ +.. +..+.+ +-.....|+.||...+.+++.++.+ +|+++++|+|+.|.+|........
T Consensus 146 ~-E~~-----~~~~~~------------~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~ 204 (297)
T PLN02583 146 D-ERS-----WSDQNF------------CRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPY 204 (297)
T ss_pred C-ccc-----CCCHHH------------HhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhh
Confidence 0 000 000000 0011126999999888888777654 489999999999999865321110
Q ss_pred -CCcchhhhhccCCCCCHHHHHHHHHhhhh
Q 017757 270 -RPRLTSIIAASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 270 -~~~~~~~~~~~~~~~~~~~~a~~~~~~i~ 298 (366)
..............+..+++|+.++.++.
T Consensus 205 ~~~~~~~~~~~~~~~v~V~Dva~a~~~al~ 234 (297)
T PLN02583 205 LKGAAQMYENGVLVTVDVNFLVDAHIRAFE 234 (297)
T ss_pred hcCCcccCcccCcceEEHHHHHHHHHHHhc
Confidence 00000000111235678888888777764
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=162.76 Aligned_cols=231 Identities=14% Similarity=0.145 Sum_probs=147.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
-.||+++||||+|+||++++++|+++|++|+++.|+....+...+..... ...++.++.+|+++.++++++++ .+|
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d 79 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE---GCD 79 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh---CCC
Confidence 46899999999999999999999999999999999876554433222111 12468889999999999999888 589
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
+|||+|+..... . .+...+++++|+.++.++++++... .. .++||++||.................++.
T Consensus 80 ~vih~A~~~~~~---~--~~~~~~~~~~nv~gt~~ll~~~~~~---~~---v~rvV~~SS~~~~~~~~~~~~~~~~~~E~ 148 (322)
T PLN02986 80 AVFHTASPVFFT---V--KDPQTELIDPALKGTINVLNTCKET---PS---VKRVILTSSTAAVLFRQPPIEANDVVDET 148 (322)
T ss_pred EEEEeCCCcCCC---C--CCchhhhhHHHHHHHHHHHHHHHhc---CC---ccEEEEecchhheecCCccCCCCCCcCcc
Confidence 999999964321 1 1123568999999999999987532 11 45999999987642110000000000000
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC-Cc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR-PR 272 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~-~~ 272 (366)
.+ ..|.. +......|++||.+.+.+++.+.+++ |++++++.|+.+.+|......... ..
T Consensus 149 ~~-----~~p~~------------~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~ 208 (322)
T PLN02986 149 FF-----SDPSL------------CRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVEL 208 (322)
T ss_pred cC-----CChHH------------hhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHH
Confidence 00 00000 00112379999998888888776653 899999999999998643210000 00
Q ss_pred chhhhh-------ccCCCCCHHHHHHHHHhhhhC
Q 017757 273 LTSIIA-------ASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 273 ~~~~~~-------~~~~~~~~~~~a~~~~~~i~~ 299 (366)
...+.. .....+.++++++.++..+..
T Consensus 209 ~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~ 242 (322)
T PLN02986 209 IVDFINGKNLFNNRFYRFVDVRDVALAHIKALET 242 (322)
T ss_pred HHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcC
Confidence 000000 012356788888887776643
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-18 Score=150.87 Aligned_cols=170 Identities=29% Similarity=0.373 Sum_probs=130.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc---hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc----C
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA-RVSILARSG---KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA----G 110 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~----~ 110 (366)
++|||||.||||..+++.|+++|. +|++++|+. ...++..++++.. +.++.++++|++|++++++++++. +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-GARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-CCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 789999999999999999999986 699999993 2444566667665 779999999999999999999874 6
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|.|||+||......+.+.++++++.++...+.+..++.+.+.+ .+ ...+|++||+.+..
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~---l~~~i~~SSis~~~------------ 141 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RP---LDFFILFSSISSLL------------ 141 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TT---TSEEEEEEEHHHHT------------
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CC---CCeEEEECChhHhc------------
Confidence 999999999998888999999999999999999999999988754 11 56999999999988
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.++.. .|+++.+.++.+++..+. .|.++.+|+-|..+
T Consensus 142 ----------G~~gq~-----------------~YaaAN~~lda~a~~~~~----~g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 142 ----------GGPGQS-----------------AYAAANAFLDALARQRRS----RGLPAVSINWGAWD 179 (181)
T ss_dssp ----------T-TTBH-----------------HHHHHHHHHHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred ----------cCcchH-----------------hHHHHHHHHHHHHHHHHh----CCCCEEEEEccccC
Confidence 888888 999999999988887665 46778888876543
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.4e-18 Score=161.53 Aligned_cols=185 Identities=18% Similarity=0.103 Sum_probs=137.2
Q ss_pred CCCCEEEEEcCCChhHHH--HHHHHHHCCCeEEEEecCchhHH------------HHHHHHHhhcCCeEEEEEecCCCHH
Q 017757 35 IKDRHVFITGGSSGIGLA--LAHQAAKEGARVSILARSGKKLE------------EAKQSIQLATGIEVATYSADVRDFD 100 (366)
Q Consensus 35 l~gk~vLITGas~gIG~a--ia~~L~~~G~~V~l~~r~~~~~~------------~~~~~l~~~~~~~v~~~~~Dls~~~ 100 (366)
-.+|++||||+++|||.+ +|++| ++|++|+++++..+..+ ...+.+. ..+..+..+.||+++++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence 458999999999999999 89999 99999988886432211 2233333 33566788999999999
Q ss_pred HHHHHHHh----cCCCcEEEEcCCCCCCCC-----------------c-----------------cCCCHHHHHHHHHHH
Q 017757 101 AVKTALDE----AGPVDVLVVNQGVFVPGE-----------------L-----------------EVQSLDEVRLMIDVN 142 (366)
Q Consensus 101 ~v~~~~~~----~~~id~vi~nAG~~~~~~-----------------~-----------------~~~~~~~~~~~~~vN 142 (366)
++++++++ +|++|+||||+|...... + ...+.++++.++++-
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vM 196 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVM 196 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhh
Confidence 98888765 589999999999764322 1 124566666665443
Q ss_pred HHHH-HHH--HHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc--cccccccccccc
Q 017757 143 ITGS-FHM--IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY--HVTSWRELSGQF 217 (366)
Q Consensus 143 ~~~~-~~l--~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 217 (366)
-.-. ... .+...++|.+ .++++..|...+.. ..|.+ .
T Consensus 197 ggedw~~Wi~al~~a~lla~-----g~~~va~TY~G~~~----------------------t~p~Y~~g----------- 238 (398)
T PRK13656 197 GGEDWELWIDALDEAGVLAE-----GAKTVAYSYIGPEL----------------------THPIYWDG----------- 238 (398)
T ss_pred ccchHHHHHHHHHhcccccC-----CcEEEEEecCCcce----------------------eecccCCc-----------
Confidence 3311 222 3444555644 57999999987765 55554 3
Q ss_pred cccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 218 CLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 218 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
.-+.+|++|+.-++.|+.+|++.|||+|++.+|.+.|.-...
T Consensus 239 ------~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~Ass~ 280 (398)
T PRK13656 239 ------TIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQASSA 280 (398)
T ss_pred ------hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhc
Confidence 568999999999999999999999999999999999986554
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.7e-18 Score=158.29 Aligned_cols=238 Identities=17% Similarity=0.169 Sum_probs=162.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH--HHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA--KQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~--~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.+++|+||||+|.||..++++|+++|+.|..+.|++++.+.. ..+++.. +.+...+..|++|++++++.++ +.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a-~~~l~l~~aDL~d~~sf~~ai~---gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA-KERLKLFKADLLDEGSFDKAID---GCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC-cccceEEeccccccchHHHHHh---CCC
Confidence 789999999999999999999999999999999999885443 3333322 3468899999999999999999 799
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
.|+|.|....... .+ .-.++++..+.|+.+++++|.+.- ...|||++||.++..++-++......-+++
T Consensus 81 gVfH~Asp~~~~~---~~--~e~~li~pav~Gt~nVL~ac~~~~------sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~ 149 (327)
T KOG1502|consen 81 GVFHTASPVDFDL---ED--PEKELIDPAVKGTKNVLEACKKTK------SVKRVVYTSSTAAVRYNGPNIGENSVVDEE 149 (327)
T ss_pred EEEEeCccCCCCC---CC--cHHhhhhHHHHHHHHHHHHHhccC------CcceEEEeccHHHhccCCcCCCCCcccccc
Confidence 9999998654422 12 123689999999999999995432 257999999999987653333322222221
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccC-CcEEEEEcCCCCCCCChhhhhhcC--
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD-DIHVSLIFPPDTETPGLEEENKRR-- 270 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~-gI~Vn~V~PG~v~T~~~~~~~~~~-- 270 (366)
-++. +.+ +-.....|+.||. +++..|.++++. |+...+|+||+|-.|.........
T Consensus 150 ~wsd-----~~~------------~~~~~~~Y~~sK~----lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~ 208 (327)
T KOG1502|consen 150 SWSD-----LDF------------CRCKKLWYALSKT----LAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLN 208 (327)
T ss_pred cCCc-----HHH------------HHhhHHHHHHHHH----HHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHH
Confidence 1000 000 0000127999999 777777777754 599999999999998766511110
Q ss_pred -------CcchhhhhccCCCCCHHHHHHHHHhhhh----CCCeEeeCCch
Q 017757 271 -------PRLTSIIAASSGAMKADEVAKKALDGIK----SGSFIVPCNSE 309 (366)
Q Consensus 271 -------~~~~~~~~~~~~~~~~~~~a~~~~~~i~----~gr~~~~~~v~ 309 (366)
.............++.+++|++.+.+.+ .||+....++.
T Consensus 209 ~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~GRyic~~~~~ 258 (327)
T KOG1502|consen 209 ALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAKGRYICVGEVV 258 (327)
T ss_pred HHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcccCceEEEecCcc
Confidence 0011111112234677888887776663 45666665543
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.7e-18 Score=161.80 Aligned_cols=230 Identities=13% Similarity=0.003 Sum_probs=151.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH-HHHHHHHh---hcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE-EAKQSIQL---ATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~-~~~~~l~~---~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
-++++|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.. ..+.++.++.+|++|.++++++++.
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD 81 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence 3578999999999999999999999999999999998754311 11122210 1134688999999999999999987
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
. .+|+|||+|+...... ..++.+..+++|+.++.++++++.+...++. ...++|++||...+..... .
T Consensus 82 ~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~--~~~~~v~~Ss~~vyg~~~~-----~ 149 (340)
T PLN02653 82 I-KPDEVYNLAAQSHVAV----SFEMPDYTADVVATGALRLLEAVRLHGQETG--RQIKYYQAGSSEMYGSTPP-----P 149 (340)
T ss_pred c-CCCEEEECCcccchhh----hhhChhHHHHHHHHHHHHHHHHHHHhccccc--cceeEEEeccHHHhCCCCC-----C
Confidence 6 5899999999754321 2344567789999999999999988765421 1237889988654431000 0
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc---CCcEEEEEcCCCCCCCChhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA---DDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~---~gI~Vn~V~PG~v~T~~~~~ 265 (366)
..+..+..+...|+.||.+.+.++++++.++.. .++.+|.+.|+...+.+...
T Consensus 150 ------------------------~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~ 205 (340)
T PLN02653 150 ------------------------QSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRK 205 (340)
T ss_pred ------------------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhH
Confidence 001112222338999999999999999888642 34555677776544321111
Q ss_pred h---h----hcCCcchhhh---hccCCCCCHHHHHHHHHhhhhC
Q 017757 266 E---N----KRRPRLTSII---AASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 266 ~---~----~~~~~~~~~~---~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
. . ...+ ..... ......+..+++++.++..+..
T Consensus 206 ~~~~~~~~~~~~~-~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~ 248 (340)
T PLN02653 206 ITRAVGRIKVGLQ-KKLFLGNLDASRDWGFAGDYVEAMWLMLQQ 248 (340)
T ss_pred HHHHHHHHHcCCC-CceEeCCCcceecceeHHHHHHHHHHHHhc
Confidence 1 0 0000 00000 0112356789999998887754
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.7e-18 Score=145.31 Aligned_cols=144 Identities=19% Similarity=0.235 Sum_probs=118.1
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
+.+++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++... +.+..++.+|+++.+++++++++
T Consensus 10 ~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~v~~~~ 88 (169)
T PRK06720 10 MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-GGEALFVSYDMEKQGDWQRVISITL 88 (169)
T ss_pred cccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999988877777777633 55677899999999999887654
Q ss_pred --cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CCCcEEEEecCCcccc
Q 017757 109 --AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN----GGPASIALMSSQAGQC 178 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~----~~~g~iv~vsS~~~~~ 178 (366)
++++|++|||||.... ..+.+.+.++ ++ .+|+.+.++.++.+.++|+++++ ...||+..|||.+...
T Consensus 89 ~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
T PRK06720 89 NAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF 162 (169)
T ss_pred HHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence 6899999999998764 4444445555 44 77778889999999999988764 3578999999987654
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-17 Score=158.29 Aligned_cols=225 Identities=15% Similarity=0.153 Sum_probs=148.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH-HHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA-KQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~-~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.+++|+++||||+|.||++++++|+++|++|++++|+.+..... ...+.. ...++.++.+|++|.+++.++++ ++
T Consensus 7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~---~~ 82 (342)
T PLN02214 7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAID---GC 82 (342)
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHh---cC
Confidence 35789999999999999999999999999999999986643321 122221 12368889999999999999887 68
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|||+|+... ++.+..+++|+.++.++++++.+. + .++||++||..+.............+ +
T Consensus 83 d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~----~---v~r~V~~SS~~avyg~~~~~~~~~~~-E 145 (342)
T PLN02214 83 DGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA----K---VKRVVITSSIGAVYMDPNRDPEAVVD-E 145 (342)
T ss_pred CEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc----C---CCEEEEeccceeeeccCCCCCCcccC-c
Confidence 99999998642 134678999999999999998642 2 45999999976544211100000000 0
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh-----
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN----- 267 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~----- 267 (366)
..+. .. ..+..+...|+.||.+.+.+++.++.++ |+++..+.|+.|..|......
T Consensus 146 ~~~~----~~-------------~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~ 205 (342)
T PLN02214 146 SCWS----DL-------------DFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLY 205 (342)
T ss_pred ccCC----Ch-------------hhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHH
Confidence 0000 00 0011122379999999999888877664 899999999999888532110
Q ss_pred ---h-cCCcchhhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 268 ---K-RRPRLTSIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 268 ---~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
. ...............+..+++++.++..+..
T Consensus 206 ~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~ 241 (342)
T PLN02214 206 HVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEA 241 (342)
T ss_pred HHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhC
Confidence 0 0000000001112356788888888877754
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.1e-17 Score=158.33 Aligned_cols=227 Identities=16% Similarity=0.145 Sum_probs=148.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
..|++|||||+|.||++++++|+++|++|++++|+.+..+......... ...++.++.+|++|.+.++++++ .+|+
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~---~~d~ 80 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR---GCTG 80 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh---CCCE
Confidence 5679999999999999999999999999999999876655443322111 11357889999999999998887 5899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|||+|+..... .. +..+..+++|+.++.++++++.+... .++||++||.......... ...+.++.
T Consensus 81 ViH~A~~~~~~---~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~------~~r~v~~SS~~~~~~~~~~--~~~~~E~~- 146 (351)
T PLN02650 81 VFHVATPMDFE---SK--DPENEVIKPTVNGMLSIMKACAKAKT------VRRIVFTSSAGTVNVEEHQ--KPVYDEDC- 146 (351)
T ss_pred EEEeCCCCCCC---CC--CchhhhhhHHHHHHHHHHHHHHhcCC------ceEEEEecchhhcccCCCC--CCccCccc-
Confidence 99999864321 11 22356789999999999999875421 2589999997554311000 00000000
Q ss_pred ccccCCCCCCcccccccccccc-ccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 195 CESSGKGHGGYHVTSWRELSGQ-FCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
|...... .+..+...|+.||.+.+.+++.++.+ +|++++.+.|+.+.+|....... +..
T Consensus 147 ---------------~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~--~~~ 206 (351)
T PLN02650 147 ---------------WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMP--PSL 206 (351)
T ss_pred ---------------CCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCC--ccH
Confidence 0000000 00011237999999999999888776 48999999999999885432100 000
Q ss_pred hhh----------h--hccCCCCCHHHHHHHHHhhhhC
Q 017757 274 TSI----------I--AASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 274 ~~~----------~--~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
... . ......+..+++++.++..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~ 244 (351)
T PLN02650 207 ITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEH 244 (351)
T ss_pred HHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcC
Confidence 000 0 0112356788888888777643
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.6e-17 Score=155.70 Aligned_cols=227 Identities=15% Similarity=0.091 Sum_probs=145.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEE-EEecCchhHHHHHHHHHh-hcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVS-ILARSGKKLEEAKQSIQL-ATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~-l~~r~~~~~~~~~~~l~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
|++|||||+|+||++++++|.++|++++ +++|.... .... .+.. ....++.++.+|++|.+++++++++. ++|+|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D~V 78 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLM-SLAPVAQSERFAFEKVDICDRAELARVFTEH-QPDCV 78 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchh-hhhhcccCCceEEEECCCcChHHHHHHHhhc-CCCEE
Confidence 5799999999999999999999998854 45554321 1111 1111 11236778899999999999999864 59999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCcEEEEecCCccccccccccCccCccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQ--NGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~--~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
||+||.... +.+.++++..+++|+.++.++++++.+.+.... .....++|++||...+...... +..
T Consensus 79 ih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-------~~~ 147 (355)
T PRK10217 79 MHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHST-------DDF 147 (355)
T ss_pred EECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCC-------CCC
Confidence 999996532 224566789999999999999999987643111 0113589999996543200000 000
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh------hh
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE------EN 267 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~------~~ 267 (366)
+.+..+..+...|+.||.+.+.+++.++.++ ++++..+.|+.+..|.... ..
T Consensus 148 -------------------~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~ 205 (355)
T PRK10217 148 -------------------FTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMI 205 (355)
T ss_pred -------------------cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHH
Confidence 0011111223389999999999999998875 6777778887776664311 00
Q ss_pred hc---CCcch--hhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 268 KR---RPRLT--SIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 268 ~~---~~~~~--~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
.. ..... .........+..+++++.+...+..+
T Consensus 206 ~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~ 243 (355)
T PRK10217 206 LNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTG 243 (355)
T ss_pred HHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcC
Confidence 00 00000 00001123678999999888776543
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=159.00 Aligned_cols=182 Identities=14% Similarity=0.065 Sum_probs=124.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-----HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-----LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
|++|||||+|+||++++++|+++|++|++++|+.+. ++...+......+.++.++.+|++|.+++.++++.. ++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-KP 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-CC
Confidence 689999999999999999999999999999997642 111111111111346889999999999999999976 48
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|||+|+...... ..+.....+++|+.++.++++++.+.-.++ ..++|++||...+... ... .
T Consensus 80 d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~----~~~~v~~SS~~vyg~~-~~~---~---- 143 (343)
T TIGR01472 80 TEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIK----SVKFYQASTSELYGKV-QEI---P---- 143 (343)
T ss_pred CEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCc----CeeEEEeccHHhhCCC-CCC---C----
Confidence 99999999754321 222335677899999999999997642111 2489999997654310 000 0
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc---CCcEEEEEcCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA---DDIHVSLIFPP 256 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~---~gI~Vn~V~PG 256 (366)
..+..+..+...|+.||.+.+.+++.++.++.- .++.+|...|+
T Consensus 144 --------------------~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~ 190 (343)
T TIGR01472 144 --------------------QNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPR 190 (343)
T ss_pred --------------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCC
Confidence 011112223338999999999999999887632 12334556665
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.76 E-value=8e-17 Score=159.96 Aligned_cols=206 Identities=14% Similarity=0.100 Sum_probs=138.4
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH----------------HHHHHHHHhhcCCeEEEEEe
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL----------------EEAKQSIQLATGIEVATYSA 94 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~----------------~~~~~~l~~~~~~~v~~~~~ 94 (366)
.+-+++++++|||||+|+||++++++|+++|++|+++++..... .+..+.+....+.++.++.+
T Consensus 41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 120 (442)
T PLN02572 41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG 120 (442)
T ss_pred CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence 34568899999999999999999999999999999987532110 01111111112346889999
Q ss_pred cCCCHHHHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 95 DVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 95 Dls~~~~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
|++|.+++++++++. ++|+|||+|+... ......++++++..+++|+.|++++++++...-. ..++|++||.
T Consensus 121 Dl~d~~~v~~~l~~~-~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv------~~~~V~~SS~ 192 (442)
T PLN02572 121 DICDFEFLSEAFKSF-EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP------DCHLVKLGTM 192 (442)
T ss_pred CCCCHHHHHHHHHhC-CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC------CccEEEEecc
Confidence 999999999999876 6899999997633 2333456677788899999999999999865311 2489999998
Q ss_pred ccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEc
Q 017757 175 AGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIF 254 (366)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~ 254 (366)
..+..+..+.....+...........+ .+..+...|+.||.+.+.+++..+.. +|+++..+.
T Consensus 193 ~vYG~~~~~~~E~~i~~~~~~~e~~~~---------------~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR 254 (442)
T PLN02572 193 GEYGTPNIDIEEGYITITHNGRTDTLP---------------YPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLN 254 (442)
T ss_pred eecCCCCCCCccccccccccccccccc---------------CCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEe
Confidence 765411000000000000000000000 01122237999999998888877765 489999999
Q ss_pred CCCCCCCC
Q 017757 255 PPDTETPG 262 (366)
Q Consensus 255 PG~v~T~~ 262 (366)
|+.+..|.
T Consensus 255 ~~~vyGp~ 262 (442)
T PLN02572 255 QGVVYGVR 262 (442)
T ss_pred cccccCCC
Confidence 99998875
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.9e-17 Score=155.64 Aligned_cols=202 Identities=15% Similarity=0.109 Sum_probs=138.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+-.++++|||||+|.||++++++|+++|++|++++|+.+..+...+.+.. +.++.++.+|+++.+++.++++ .+|
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---~~d 81 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE--GDRLRLFRADLQEEGSFDEAVK---GCD 81 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc--CCeEEEEECCCCCHHHHHHHHc---CCC
Confidence 34678999999999999999999999999999999987665554443321 3568889999999999998887 589
Q ss_pred EEEEcCCCCCCCC-ccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 114 VLVVNQGVFVPGE-LEVQSLDEV--RLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 114 ~vi~nAG~~~~~~-~~~~~~~~~--~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
+|||+|+...... ....+++.+ ..++++|+.++.++++++.+.. . .++||++||.+.+.............
T Consensus 82 ~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~---~~~~v~~SS~~vyg~~~~~~~~~~~~ 155 (353)
T PLN02896 82 GVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T---VKRVVFTSSISTLTAKDSNGRWRAVV 155 (353)
T ss_pred EEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C---ccEEEEEechhhccccccCCCCCCcc
Confidence 9999999764432 122234443 4677888999999999986542 1 35899999987664211000000000
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
++.. ..|.. ....+.++...|+.||.+.+.+++.++.++ |+++.++.|+.+.+|..
T Consensus 156 ~E~~------~~p~~--------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 156 DETC------QTPID--------HVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFL 211 (353)
T ss_pred Cccc------CCcHH--------HhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCc
Confidence 0000 00000 000001122379999999999888877654 89999999999988854
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.75 E-value=4e-17 Score=155.33 Aligned_cols=229 Identities=17% Similarity=0.202 Sum_probs=146.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
+||++|||||+|.||++++++|+++|++|++++|+.............. ...++.++.+|++|+++++++++ .+|+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~ 79 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD---GCEG 79 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc---CCCE
Confidence 5789999999999999999999999999999999865433222111111 12468899999999999988887 6899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc-cCccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM-KGINENK 193 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~-~~~~~~~ 193 (366)
|||+|+..... ..++ .+..+++|+.++.++++++.... + ..++|++||..+......+... ...+++
T Consensus 80 Vih~A~~~~~~---~~~~--~~~~~~~nv~gt~~ll~a~~~~~---~---~~~~v~~SS~~~~~y~~~~~~~~~~~~E~- 147 (322)
T PLN02662 80 VFHTASPFYHD---VTDP--QAELIDPAVKGTLNVLRSCAKVP---S---VKRVVVTSSMAAVAYNGKPLTPDVVVDET- 147 (322)
T ss_pred EEEeCCcccCC---CCCh--HHHHHHHHHHHHHHHHHHHHhCC---C---CCEEEEccCHHHhcCCCcCCCCCCcCCcc-
Confidence 99999864321 1122 25788999999999999986431 1 4599999997643110000000 000000
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC-Cc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR-PR 272 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~-~~ 272 (366)
.+..|.. +.+....|+.||.+.+.+++.++.+ .|+++..+.|+.+.+|......... ..
T Consensus 148 -----~~~~p~~------------~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~ 207 (322)
T PLN02662 148 -----WFSDPAF------------CEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEA 207 (322)
T ss_pred -----cCCChhH------------hhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHH
Confidence 0000100 0001127999999888888777655 4899999999999988643210000 00
Q ss_pred chhhh-------hccCCCCCHHHHHHHHHhhhhC
Q 017757 273 LTSII-------AASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 273 ~~~~~-------~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
..+.. .....++..+++++.++..+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 241 (322)
T PLN02662 208 ILNLINGAQTFPNASYRWVDVRDVANAHIQAFEI 241 (322)
T ss_pred HHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcC
Confidence 00010 1112357889999988877754
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7e-17 Score=155.00 Aligned_cols=195 Identities=17% Similarity=0.174 Sum_probs=132.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++++++||||+|+||++++++|+++|++|+++.|+.+....... +... ...++.++.+|++|.+++.++++ ++
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~ 81 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA---GC 81 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh---cC
Confidence 4568999999999999999999999999999989888654433221 1111 01257889999999999998887 68
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|||+|+... .. ..+.....+++|+.++.++++++.+.. + .+++|++||.+.+............ ++
T Consensus 82 d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~---~~~~v~~SS~~~~g~~~~~~~~~~~-~E 149 (338)
T PLN00198 82 DLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---S---VKRVILTSSAAAVSINKLSGTGLVM-NE 149 (338)
T ss_pred CEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C---ccEEEEeecceeeeccCCCCCCcee-cc
Confidence 99999998532 11 122345678999999999999986531 1 4699999998765411000000000 00
Q ss_pred ccccccCCCCCCccccccccccc-cccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSG-QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
.. |..... ..+.++...|+.||.+.+.+++.++.+ +|+++..+.|+.+.+|.
T Consensus 150 ~~---------------~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 150 KN---------------WTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPS 202 (338)
T ss_pred cc---------------CCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCC
Confidence 00 000000 001122337999999999998888775 48999999999998885
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-16 Score=152.01 Aligned_cols=184 Identities=18% Similarity=0.241 Sum_probs=128.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
|++++|+++||||+|+||++++++|+++|++|++++|......+..+.+... .+.++.++.+|++|++++.+++++.
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 5688999999999999999999999999999999987543332222222211 1346788999999999999998765
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
.+|+|||+|+..... .+.++..+.+++|+.++.++++++. +.+ .+++|++||...+.. ..
T Consensus 81 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~---~~~~v~~Ss~~vyg~-~~------- 140 (352)
T PLN02240 81 -RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMA----KHG---CKKLVFSSSATVYGQ-PE------- 140 (352)
T ss_pred -CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHH----HcC---CCEEEEEccHHHhCC-CC-------
Confidence 699999999975322 1335667899999999999988663 322 458999999644320 00
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
... +.+..+..+...|+.||.+.+.+++.++.+. .++++..+.|+.+
T Consensus 141 -~~~-------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v 187 (352)
T PLN02240 141 -EVP-------------------CTEEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNP 187 (352)
T ss_pred -CCC-------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCc
Confidence 000 0111122222389999999999998887642 3566666665433
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.4e-16 Score=145.71 Aligned_cols=218 Identities=14% Similarity=0.115 Sum_probs=142.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchh-HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+++||||+|+||.+++++|+++| .+|++.+|.... -.+..+.+.. ..++.++.+|++|++++.++++.+ ++|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED--NPRYRFVKGDIGDRELVSRLFTEH-QPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc--CCCcEEEEcCCcCHHHHHHHHhhc-CCCEE
Confidence 48999999999999999999987 688888764311 1111122211 236778899999999999999865 59999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||+|+..... .+.++.+..+++|+.++..+++++.+.+. ..+++++||...+.. ..... .
T Consensus 78 i~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~i~~Ss~~v~g~-~~~~~--~------- 137 (317)
T TIGR01181 78 VHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH------EFRFHHISTDEVYGD-LEKGD--A------- 137 (317)
T ss_pred EEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC------CceEEEeeccceeCC-CCCCC--C-------
Confidence 9999975432 23455677899999999999988865432 248999999664431 00000 0
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh--h----hc
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE--N----KR 269 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~--~----~~ 269 (366)
..+..+..+...|+.+|.+.+.+++.++.+. ++++..+.|+.+..+..... . ..
T Consensus 138 -----------------~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~~~~~~~ 197 (317)
T TIGR01181 138 -----------------FTETTPLAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLIPLMITN 197 (317)
T ss_pred -----------------cCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHHHHHHHH
Confidence 0011111222389999999999999887764 78999999998877643210 0 00
Q ss_pred --CCcchhhhh---ccCCCCCHHHHHHHHHhhhhC
Q 017757 270 --RPRLTSIIA---ASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 270 --~~~~~~~~~---~~~~~~~~~~~a~~~~~~i~~ 299 (366)
......... ....++..+++++.+...+..
T Consensus 198 ~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~ 232 (317)
T TIGR01181 198 ALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEK 232 (317)
T ss_pred HhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcC
Confidence 000000000 011355789999888777654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.7e-16 Score=151.02 Aligned_cols=228 Identities=18% Similarity=0.170 Sum_probs=174.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++||+++||||+|-||.++++++++.+. ++++.+|++.++.+...+++..++ .++.++-+|+.|.+.++++++.+ ++
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-kv 326 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-KV 326 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-CC
Confidence 7899999999999999999999999986 589999999999999999987654 68899999999999999999987 69
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|+|.|+.-+....+ ....+.+.+|+.|+.++++++...- ..++|++|+--+..
T Consensus 327 d~VfHAAA~KHVPl~E----~nP~Eai~tNV~GT~nv~~aa~~~~-------V~~~V~iSTDKAV~-------------- 381 (588)
T COG1086 327 DIVFHAAALKHVPLVE----YNPEEAIKTNVLGTENVAEAAIKNG-------VKKFVLISTDKAVN-------------- 381 (588)
T ss_pred ceEEEhhhhccCcchh----cCHHHHHHHhhHhHHHHHHHHHHhC-------CCEEEEEecCcccC--------------
Confidence 9999999987654433 2345579999999999999996543 45899999965543
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC------Chhhh
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP------GLEEE 266 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~------~~~~~ 266 (366)
+.. .|++||...+.++.+++......+-++.+|.-|.|... ++++.
T Consensus 382 -----------PtN-----------------vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~Q 433 (588)
T COG1086 382 -----------PTN-----------------VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQ 433 (588)
T ss_pred -----------Cch-----------------HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHH
Confidence 222 89999999999999999977765788888988888554 23322
Q ss_pred hhcCCcch-hhhhccCCCCCHHHHHHHHHhhhhC-----------CCeEeeCCchhHHHHHH
Q 017757 267 NKRRPRLT-SIIAASSGAMKADEVAKKALDGIKS-----------GSFIVPCNSEGFLLSIA 316 (366)
Q Consensus 267 ~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~i~~-----------gr~~~~~~v~~~~~~L~ 316 (366)
......++ .....+.-+|+-+|.++.++++... |+.....|.|..+.-|.
T Consensus 434 I~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~ 495 (588)
T COG1086 434 IAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELA 495 (588)
T ss_pred HHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHh
Confidence 22112211 2223334478899999999888643 33444446677766665
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-15 Score=146.67 Aligned_cols=186 Identities=15% Similarity=0.066 Sum_probs=131.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHh----hcCCeEEEEEecCCCHHHHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL----ATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~----~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+..+++|+++||||+|.||.+++++|.++|++|++++|.............. ....++.++.+|++|.+++.++++
T Consensus 10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~ 89 (348)
T PRK15181 10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK 89 (348)
T ss_pred cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence 3567789999999999999999999999999999999865432222222211 112357889999999999988887
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
.+|+|||.|+...... ..++....+++|+.|+.++++++.. .+ ..++|++||...+.... .
T Consensus 90 ---~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~----~~---~~~~v~~SS~~vyg~~~-~---- 150 (348)
T PRK15181 90 ---NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARD----AH---VSSFTYAASSSTYGDHP-D---- 150 (348)
T ss_pred ---CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----cC---CCeEEEeechHhhCCCC-C----
Confidence 5899999999654321 2233456799999999999998843 22 45899999976553100 0
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
....+ ..+..+...|+.||.+.+.+++.++.+ +|+++..+.|+.+..|.
T Consensus 151 ----~~~~e-------------------~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~ 199 (348)
T PRK15181 151 ----LPKIE-------------------ERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRR 199 (348)
T ss_pred ----CCCCC-------------------CCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcC
Confidence 00000 001111227999999999888887665 38999999999887774
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.9e-16 Score=144.98 Aligned_cols=223 Identities=17% Similarity=0.159 Sum_probs=149.3
Q ss_pred EEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcC-C----eEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 40 VFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATG-I----EVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~----~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+|||||+|-||++++++|++.+. ++++++|++..+-++..++....+ . .+.++.+|++|.+.++++++++ ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-KPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT---T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-CCC
Confidence 69999999999999999999985 699999999999999998865432 2 2345689999999999999887 799
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
+|+|.|+.-+....++ . ..+.+++|+.|+.++++++..+- ..++|++|+--+..
T Consensus 80 iVfHaAA~KhVpl~E~-~---p~eav~tNv~GT~nv~~aa~~~~-------v~~~v~ISTDKAv~--------------- 133 (293)
T PF02719_consen 80 IVFHAAALKHVPLMED-N---PFEAVKTNVLGTQNVAEAAIEHG-------VERFVFISTDKAVN--------------- 133 (293)
T ss_dssp EEEE------HHHHCC-C---HHHHHHHHCHHHHHHHHHHHHTT--------SEEEEEEECGCSS---------------
T ss_pred EEEEChhcCCCChHHh-C---HHHHHHHHHHHHHHHHHHHHHcC-------CCEEEEccccccCC---------------
Confidence 9999999866544332 3 35679999999999999997542 45999999955432
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC------Chhhhh
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP------GLEEEN 267 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~------~~~~~~ 267 (366)
... .|++||...+.++.+.+......+.++.+|.=|.|... .+.+-.
T Consensus 134 ----------Ptn-----------------vmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi 186 (293)
T PF02719_consen 134 ----------PTN-----------------VMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQI 186 (293)
T ss_dssp ------------S-----------------HHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHH
T ss_pred ----------CCc-----------------HHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHH
Confidence 223 89999999999999999887777789999988877542 122211
Q ss_pred hcCCcch-hhhhccCCCCCHHHHHHHHHhhhhC-----------CCeEeeCCchhHHHHHH
Q 017757 268 KRRPRLT-SIIAASSGAMKADEVAKKALDGIKS-----------GSFIVPCNSEGFLLSIA 316 (366)
Q Consensus 268 ~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~i~~-----------gr~~~~~~v~~~~~~L~ 316 (366)
.....++ .......-.++.++.++.++++... |+.....|++..+.-+.
T Consensus 187 ~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~ 247 (293)
T PF02719_consen 187 KNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELS 247 (293)
T ss_dssp HTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHT
T ss_pred HcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhc
Confidence 1111221 1222233467999999999888733 34445556666655443
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.9e-15 Score=142.67 Aligned_cols=179 Identities=21% Similarity=0.192 Sum_probs=121.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||+|+||++++++|+++|++|++++|...........+....+.++.++.+|++|.+++.++++.. ++|+|||+
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vvh~ 80 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDH-AIDTVIHF 80 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcC-CCCEEEEC
Confidence 58999999999999999999999999998875443333323333322446778899999999999988754 69999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||...... ..+.....+++|+.++.++++++. +.+ .+++|++||...+... .. ..+ .| .
T Consensus 81 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~---~~~~v~~Ss~~~yg~~-~~---~~~-----~E-~ 139 (338)
T PRK10675 81 AGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AAN---VKNLIFSSSATVYGDQ-PK---IPY-----VE-S 139 (338)
T ss_pred Cccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcC---CCEEEEeccHHhhCCC-CC---Ccc-----cc-c
Confidence 99754322 223345678999999999887653 332 4689999997654310 00 000 00 0
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
.+...... .|+.+|++.+.++++++++. .++++..+.|+.+
T Consensus 140 ~~~~~p~~-----------------~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v 180 (338)
T PRK10675 140 FPTGTPQS-----------------PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNP 180 (338)
T ss_pred cCCCCCCC-----------------hhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeee
Confidence 00001123 89999999999999987654 2466666654433
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.6e-15 Score=135.52 Aligned_cols=204 Identities=18% Similarity=0.168 Sum_probs=129.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH-HHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF-DAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~-~~v~~~~~~~~~i 112 (366)
..++++++||||+|+||++++++|+++|++|+++.|+.++.+... .. +.++.++.+|++|. +++.+.+. .++
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~--~~~~~~~~~Dl~d~~~~l~~~~~--~~~ 86 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---PQ--DPSLQIVRADVTEGSDKLVEAIG--DDS 86 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---cc--CCceEEEEeeCCCCHHHHHHHhh--cCC
Confidence 456889999999999999999999999999999999877644322 11 23688899999983 44433331 379
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+||+|+|....... ...+++|+.+..++++++. +.+ .++||++||...+...
T Consensus 87 d~vi~~~g~~~~~~~--------~~~~~~n~~~~~~ll~a~~----~~~---~~~iV~iSS~~v~g~~------------ 139 (251)
T PLN00141 87 DAVICATGFRRSFDP--------FAPWKVDNFGTVNLVEACR----KAG---VTRFILVSSILVNGAA------------ 139 (251)
T ss_pred CEEEECCCCCcCCCC--------CCceeeehHHHHHHHHHHH----HcC---CCEEEEEccccccCCC------------
Confidence 999999986432111 1124688888888888863 332 5799999998643200
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHH-HHHHHhH-hccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGL-AEALQQE-VIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l-~~~la~e-~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
.+.+... .|...|.....+ .+..+.+ +...|+++++|.||++.++.........
T Consensus 140 -------~~~~~~~-----------------~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~ 195 (251)
T PLN00141 140 -------MGQILNP-----------------AYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVME 195 (251)
T ss_pred -------cccccCc-----------------chhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEEC
Confidence 0111112 455555433332 2323332 3456899999999999876432111000
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
+. .....+.++++++++.+...+..
T Consensus 196 ~~----~~~~~~~i~~~dvA~~~~~~~~~ 220 (251)
T PLN00141 196 PE----DTLYEGSISRDQVAEVAVEALLC 220 (251)
T ss_pred CC----CccccCcccHHHHHHHHHHHhcC
Confidence 00 00112357888888888877644
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.6e-15 Score=145.91 Aligned_cols=196 Identities=19% Similarity=0.288 Sum_probs=132.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-----CCeEEEEEecCCCHHHHHHHHH
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-----GIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-----~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
.+.++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+ +++.... ...+.++.+|++|.+++.++++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 467899999999999999999999999999999988887655443 2222110 1257889999999999999988
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc-cccCc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI-KNTNM 186 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~-~~~~~ 186 (366)
.+|.+||.|+...+..... ..+...++|+.++.++++++... .+ ..++|++||..+..... .....
T Consensus 128 ---~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~---v~r~V~~SS~~~~vyg~~~~~~~ 194 (367)
T PLN02686 128 ---GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRT---ES---VRKCVFTSSLLACVWRQNYPHDL 194 (367)
T ss_pred ---hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhc---CC---ccEEEEeccHHHhcccccCCCCC
Confidence 5799999998754432111 11245678999999998887432 11 45899999974221000 00000
Q ss_pred -cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 187 -KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 187 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
..+++.. |. ....+..+...|+.||.+.+.+++.++.+ +|++++++.|+.|.+|..
T Consensus 195 ~~~i~E~~----------------~~--~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~ 251 (367)
T PLN02686 195 PPVIDEES----------------WS--DESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGF 251 (367)
T ss_pred CcccCCCC----------------CC--ChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCC
Confidence 0000000 00 00011223337999999999999888775 489999999999999853
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-15 Score=137.66 Aligned_cols=167 Identities=20% Similarity=0.208 Sum_probs=131.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
.++|||||+|-||.+++.+|++.|++|+++|.-.....+..... .+.+++.|+.|.+.+++++++. ++|.|||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~-~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEEN-KIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhc-CCCEEEE
Confidence 46999999999999999999999999999998765544444322 1679999999999999999988 7999999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
.||....+. +.++..+.++.|+.|+..+++++..+- ..+|||-||.+.+.
T Consensus 74 FAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am~~~g-------v~~~vFSStAavYG------------------- 123 (329)
T COG1087 74 FAASISVGE----SVQNPLKYYDNNVVGTLNLIEAMLQTG-------VKKFIFSSTAAVYG------------------- 123 (329)
T ss_pred Cccccccch----hhhCHHHHHhhchHhHHHHHHHHHHhC-------CCEEEEecchhhcC-------------------
Confidence 999765543 677778899999999999988885443 45888888877664
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEE
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLI 253 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V 253 (366)
.|... ++.+..+..+..+|+.||..++.+.+.++... +.++.++
T Consensus 124 ----~p~~~-----PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~---~~~~v~L 167 (329)
T COG1087 124 ----EPTTS-----PISETSPLAPINPYGRSKLMSEEILRDAAKAN---PFKVVIL 167 (329)
T ss_pred ----CCCCc-----ccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC---CCcEEEE
Confidence 22221 24444555566699999999999999998875 4555444
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-15 Score=134.79 Aligned_cols=225 Identities=14% Similarity=0.096 Sum_probs=156.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+++|||||+|.||.+.++.+.++.. +|+.+++=. .+.+.+. .+. ...+..+++.|++|.+.+.++++++ .+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~-~~~--~~~~~~fv~~DI~D~~~v~~~~~~~-~~D 76 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA-DVE--DSPRYRFVQGDICDRELVDRLFKEY-QPD 76 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH-hhh--cCCCceEEeccccCHHHHHHHHHhc-CCC
Confidence 4689999999999999999999854 467776622 2223322 222 1358999999999999999999987 699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
+|+|.|+-++. |-+.++.+..+++|+.|++.+++++..+..+ .+++.||.-..+. ...
T Consensus 77 ~VvhfAAESHV----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~------frf~HISTDEVYG-~l~----------- 134 (340)
T COG1088 77 AVVHFAAESHV----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK------FRFHHISTDEVYG-DLG----------- 134 (340)
T ss_pred eEEEechhccc----cccccChhhhhhcchHHHHHHHHHHHHhccc------ceEEEeccccccc-ccc-----------
Confidence 99999987664 3366666778999999999999999877543 4899999855443 000
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
... ....+..|+.+..+|+|||||-.+|++++..-+ |+.+....+..-..|-.-.+----...
T Consensus 135 ----------~~~----~~FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I 197 (340)
T COG1088 135 ----------LDD----DAFTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMI 197 (340)
T ss_pred ----------CCC----CCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHH
Confidence 000 012344455566699999999999999999976 888888888777666432210000000
Q ss_pred hhhhhcc-----------CCCCCHHHHHHHHHhhhhCCCeEee
Q 017757 274 TSIIAAS-----------SGAMKADEVAKKALDGIKSGSFIVP 305 (366)
Q Consensus 274 ~~~~~~~-----------~~~~~~~~~a~~~~~~i~~gr~~~~ 305 (366)
...+.+. .-++-.++.++++..-+..|+.++.
T Consensus 198 ~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~GE~ 240 (340)
T COG1088 198 INALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGET 240 (340)
T ss_pred HHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCCce
Confidence 1111110 1245688888888888888876654
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.2e-15 Score=142.74 Aligned_cols=232 Identities=13% Similarity=0.083 Sum_probs=142.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGAR-VSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++|||||+|+||++++++|+++|++ |+.+++.. ...+... .+. .+.++.++.+|++|.+++++++++. .+|+|
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~v 77 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS--DSERYVFEHADICDRAELDRIFAQH-QPDAV 77 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc--cCCceEEEEecCCCHHHHHHHHHhc-CCCEE
Confidence 5899999999999999999999987 55555532 1222211 111 1345778999999999999999864 69999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CCcEEEEecCCccccccccccCccCccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNG--GPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~--~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
||+||...... +.+..+..+++|+.++.++++++.++|++.... ...++|++||...+.....+.. ..+..
T Consensus 78 ih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~---~~~~~ 150 (352)
T PRK10084 78 MHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE---VENSE 150 (352)
T ss_pred EECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc---ccccc
Confidence 99999653321 223346789999999999999998876532211 1348999999765431000000 00000
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh------hhh
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE------EEN 267 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~------~~~ 267 (366)
..+ .+.+..+..+...|+.||.+.+.+++.++.++ |+++..+.|+.+..|... ...
T Consensus 151 -------~~~--------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~ 212 (352)
T PRK10084 151 -------ELP--------LFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVI 212 (352)
T ss_pred -------cCC--------CccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHH
Confidence 000 00111122233489999999999999988775 566667777777665421 100
Q ss_pred hc--CCcchhhh---hccCCCCCHHHHHHHHHhhhhC
Q 017757 268 KR--RPRLTSII---AASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 268 ~~--~~~~~~~~---~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
.. ........ ......+..+++++.+...+..
T Consensus 213 ~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~ 249 (352)
T PRK10084 213 LNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTE 249 (352)
T ss_pred HHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence 00 00000000 0012356789999988766644
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.2e-15 Score=138.76 Aligned_cols=179 Identities=18% Similarity=0.170 Sum_probs=125.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||+|+||++++++|.++|++|++++|......+....+... ..+..+.+|+++.++++++++. .++|++|||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~-~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI--TRVTFVEGDLRDRELLDRLFEE-HKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc--cceEEEECCCCCHHHHHHHHHh-CCCcEEEEC
Confidence 4799999999999999999999999998876543322222222211 1577889999999999999875 379999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||...... +.++..+.+++|+.++..+++++.+ .+ ..++|++||...+..+ .. ..+
T Consensus 78 ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~~~~v~~ss~~~~g~~-~~---~~~--------- 133 (328)
T TIGR01179 78 AGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQ----TG---VKKFIFSSSAAVYGEP-SS---IPI--------- 133 (328)
T ss_pred ccccCcch----hhcCchhhhhhhHHHHHHHHHHHHh----cC---CCEEEEecchhhcCCC-CC---CCc---------
Confidence 99754322 3334556789999999999887642 22 4589999986543200 00 000
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
.+..+..+...|+.+|++++.+++.++.+. .++++..+.|+.+..+
T Consensus 134 ---------------~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 134 ---------------SEDSPLGPINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGA 179 (328)
T ss_pred ---------------cccCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCC
Confidence 001111122389999999999999987652 4789999999887765
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-14 Score=138.32 Aligned_cols=213 Identities=18% Similarity=0.232 Sum_probs=141.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
++++||||+|+||++++++|+++|++|++++|+.+..... . ...+.++.+|++|.++++++++ .+|++||
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~~~~~~~D~~~~~~l~~~~~---~~d~vi~ 70 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E---GLDVEIVEGDLRDPASLRKAVA---GCRALFH 70 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c---cCCceEEEeeCCCHHHHHHHHh---CCCEEEE
Confidence 3699999999999999999999999999999987653221 1 2357789999999999999887 6899999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+|+.... ..++.+..+++|+.++.++++++.. .+ .+++|++||...+...... ...+++.
T Consensus 71 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~~~~v~~SS~~~~~~~~~~---~~~~e~~---- 130 (328)
T TIGR03466 71 VAADYRL------WAPDPEEMYAANVEGTRNLLRAALE----AG---VERVVYTSSVATLGVRGDG---TPADETT---- 130 (328)
T ss_pred eceeccc------CCCCHHHHHHHHHHHHHHHHHHHHH----hC---CCeEEEEechhhcCcCCCC---CCcCccC----
Confidence 9985321 1223567889999999999988753 22 4699999998765411000 0000000
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc--------
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR-------- 269 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~-------- 269 (366)
...+..... .|+.+|.+.+.+++.++.+ .|+++..+.|+.+.++........
T Consensus 131 ~~~~~~~~~-----------------~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~ 190 (328)
T TIGR03466 131 PSSLDDMIG-----------------HYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFL 190 (328)
T ss_pred CCCcccccC-----------------hHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHH
Confidence 000011122 7999999999999888765 478999999998876642110000
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
..............+..+++++.+...+..+
T Consensus 191 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~ 221 (328)
T TIGR03466 191 NGKMPAYVDTGLNLVHVDDVAEGHLLALERG 221 (328)
T ss_pred cCCCceeeCCCcceEEHHHHHHHHHHHHhCC
Confidence 0000000111123557899998888776543
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.9e-15 Score=138.54 Aligned_cols=183 Identities=18% Similarity=0.140 Sum_probs=126.6
Q ss_pred EEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 41 FITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 41 LITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
|||||+|.||.+++++|+++| ++|.++++.+..... ..+.. .....++.+|++|+++++++++ ..|+|||+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~--~~~~~~~~~Di~d~~~l~~a~~---g~d~V~H~ 73 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK--SGVKEYIQGDITDPESLEEALE---GVDVVFHT 73 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc--ccceeEEEeccccHHHHHHHhc---CCceEEEe
Confidence 699999999999999999999 789998887654221 11111 1123389999999999999998 78999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
|+...... ....+.++++|+.|+-++++++... + ..++|++||......+......... ++.
T Consensus 74 Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~---VkrlVytSS~~vv~~~~~~~~~~~~-dE~----- 135 (280)
T PF01073_consen 74 AAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA----G---VKRLVYTSSISVVFDNYKGDPIING-DED----- 135 (280)
T ss_pred CccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc----C---CCEEEEEcCcceeEeccCCCCcccC-CcC-----
Confidence 99754422 3445779999999999999999643 2 5699999999887521111100000 011
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc--CCcEEEEEcCCCCCCCChh
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA--DDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~--~gI~Vn~V~PG~v~T~~~~ 264 (366)
.+.+......|+.||+..+.++......-.. ..++..+|.|..|..|...
T Consensus 136 ----------------~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~ 187 (280)
T PF01073_consen 136 ----------------TPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ 187 (280)
T ss_pred ----------------CcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccc
Confidence 0111113338999999877777665541112 2488889999999888543
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=140.96 Aligned_cols=205 Identities=12% Similarity=0.063 Sum_probs=126.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+++.++++||||+|.||++++++|+++ |++|++++|+.++.+............++.++.+|++|.++++++++ .+
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~---~~ 87 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK---MA 87 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh---cC
Confidence 455678999999999999999999998 58999999876554332211000012368899999999999998887 58
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|||+|+...+..... + -.+.+..|+.++.++++++... ..++|++||...+....... ....
T Consensus 88 d~ViHlAa~~~~~~~~~-~---~~~~~~~n~~gt~~ll~aa~~~--------~~r~v~~SS~~vYg~~~~~~----~~e~ 151 (386)
T PLN02427 88 DLTINLAAICTPADYNT-R---PLDTIYSNFIDALPVVKYCSEN--------NKRLIHFSTCEVYGKTIGSF----LPKD 151 (386)
T ss_pred CEEEEcccccChhhhhh-C---hHHHHHHHHHHHHHHHHHHHhc--------CCEEEEEeeeeeeCCCcCCC----CCcc
Confidence 99999999754422111 2 2344668999999998877421 24899999976543110000 0000
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
.... ..+...... ..+..............|+.||.+.+.+++.++.. .|+++..+.|+.|..+.
T Consensus 152 ~p~~-~~~~~~~~~-e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 152 HPLR-QDPAFYVLK-EDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 216 (386)
T ss_pred cccc-ccccccccc-ccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCC
Confidence 0000 000000000 00000000000011236999999998888776543 48999999999998875
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=2e-14 Score=138.52 Aligned_cols=179 Identities=14% Similarity=0.101 Sum_probs=119.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHH---HHHHHHHhhc------C-CeEEEEEecCCCH------H
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLE---EAKQSIQLAT------G-IEVATYSADVRDF------D 100 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~---~~~~~l~~~~------~-~~v~~~~~Dls~~------~ 100 (366)
+++||||+|+||++++++|+++| ++|+++.|+.+... ...+.+.... . .++.++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999999 77999999865321 2222222110 1 4788999999864 3
Q ss_pred HHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 101 AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 101 ~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
...++. ..+|++||||+..... ..++...++|+.++..+++.+.. .+ ..+++++||.......
T Consensus 81 ~~~~~~---~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~~---~~~~v~iSS~~v~~~~ 143 (367)
T TIGR01746 81 EWERLA---ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----GR---AKPLHYVSTISVLAAI 143 (367)
T ss_pred HHHHHH---hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----CC---CceEEEEccccccCCc
Confidence 444444 3799999999965321 12456788999999999887753 22 3469999998765411
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
.... .. + ..+.. .........|+.||.+.+.+++.++. .|++++.+.||.+.+
T Consensus 144 ~~~~----~~-----~-~~~~~-------------~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G 196 (367)
T TIGR01746 144 DLST----VT-----E-DDAIV-------------TPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILG 196 (367)
T ss_pred CCCC----cc-----c-ccccc-------------ccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceee
Confidence 0000 00 0 00000 00001123799999999988876554 389999999999987
Q ss_pred C
Q 017757 261 P 261 (366)
Q Consensus 261 ~ 261 (366)
+
T Consensus 197 ~ 197 (367)
T TIGR01746 197 N 197 (367)
T ss_pred c
Confidence 6
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.1e-13 Score=132.38 Aligned_cols=255 Identities=18% Similarity=0.191 Sum_probs=156.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHH--HHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC-C
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEE--AKQSIQLATGIEVATYSADVRDFDAVKTALDEAG-P 111 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~--~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~-~ 111 (366)
.++++++||||+|+||++++++|+++|++|++++|+....+. ..++.... ..++.++.+|++|+++++++++..+ +
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE-LPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh-cCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999998765321 11111111 2367889999999999999998764 7
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+||||+|...... ...+++|+.+..++++++. +.+ .+++|++||.....
T Consensus 137 ~D~Vi~~aa~~~~~~---------~~~~~vn~~~~~~ll~aa~----~~g---v~r~V~iSS~~v~~------------- 187 (390)
T PLN02657 137 VDVVVSCLASRTGGV---------KDSWKIDYQATKNSLDAGR----EVG---AKHFVLLSAICVQK------------- 187 (390)
T ss_pred CcEEEECCccCCCCC---------ccchhhHHHHHHHHHHHHH----HcC---CCEEEEEeeccccC-------------
Confidence 999999998532211 1235678888887777763 332 46899999975422
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
... .|..+|...+...+. ...++++..|.|+.+..++.........
T Consensus 188 ------------p~~-----------------~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~~~~~~ 233 (390)
T PLN02657 188 ------------PLL-----------------EFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQVEIVKD 233 (390)
T ss_pred ------------cch-----------------HHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHHHHHhhcc
Confidence 122 677889888776543 2358999999998776543221111100
Q ss_pred cch-hhhhcc----CCCCCHHHHHHHHHhhhh----CCCeEe---------eCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 272 RLT-SIIAAS----SGAMKADEVAKKALDGIK----SGSFIV---------PCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 272 ~~~-~~~~~~----~~~~~~~~~a~~~~~~i~----~gr~~~---------~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
... ...... ..++..+++++.+...+. .++... ..|++..+.-.+ +..+.-..+....+.
T Consensus 234 g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~l--G~~~~~~~vp~~~~~ 311 (390)
T PLN02657 234 GGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRIL--GKEPKFFKVPIQIMD 311 (390)
T ss_pred CCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHh--CCCCceEEcCHHHHH
Confidence 000 000001 124678899888877763 233322 122333333222 223344445555555
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHH
Q 017757 334 VAAGLIRFVALCFQWNWYGSIEK 356 (366)
Q Consensus 334 ~dgG~~~~~~~~~~~~~~~~~~~ 356 (366)
+-.++...++-++. .+.+.++-
T Consensus 312 ~~~~~~~~~~~~~~-~~~~~~e~ 333 (390)
T PLN02657 312 FAIGVLDFLAKIFP-SLEDAAEF 333 (390)
T ss_pred HHHHHHHHhhhhCc-chhhhHHH
Confidence 54555544444443 44444443
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-13 Score=124.99 Aligned_cols=174 Identities=22% Similarity=0.296 Sum_probs=130.5
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
||||||+|.||.+++++|.++|..|+.+.|+........... ++.++.+|++|.++++++++.. .+|.+||+|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~dl~~~~~~~~~~~~~-~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL------NVEFVIGDLTDKEQLEKLLEKA-NIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT------TEEEEESETTSHHHHHHHHHHH-TESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc------eEEEEEeecccccccccccccc-CceEEEEee
Confidence 699999999999999999999999988888776543322211 7889999999999999999987 799999999
Q ss_pred CCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccC
Q 017757 120 GVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSG 199 (366)
Q Consensus 120 G~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (366)
+.... ..+.++....++.|+.+..++++++... + ..+++++||...+..+ .. ..
T Consensus 74 ~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~---~~~~i~~sS~~~y~~~-~~---~~----------- 127 (236)
T PF01370_consen 74 AFSSN----PESFEDPEEIIEANVQGTRNLLEAAREA----G---VKRFIFLSSASVYGDP-DG---EP----------- 127 (236)
T ss_dssp SSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHHH----T---TSEEEEEEEGGGGTSS-SS---SS-----------
T ss_pred ccccc----cccccccccccccccccccccccccccc----c---cccccccccccccccc-cc---cc-----------
Confidence 97531 1233567788899999999888888533 2 3599999996554311 00 00
Q ss_pred CCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 200 KGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
..+..+..+...|+.+|...+.+.+.+..+. ++++..+.|+.+..+.
T Consensus 128 -------------~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 128 -------------IDEDSPINPLSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG 174 (236)
T ss_dssp -------------BETTSGCCHSSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred -------------ccccccccccccccccccccccccccccccc---cccccccccccccccc
Confidence 1111111222269999999999998888765 8999999999998886
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-13 Score=131.61 Aligned_cols=180 Identities=13% Similarity=0.171 Sum_probs=121.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCC-CHHHHHHHHHhcCCCcEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR-DFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls-~~~~v~~~~~~~~~id~v 115 (366)
++++||||+|.||++++++|+++ |++|++++|+....... .. ...+.++.+|++ +.+.+.++++ ++|+|
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~---~~---~~~~~~~~~Dl~~~~~~~~~~~~---~~d~V 72 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL---VN---HPRMHFFEGDITINKEWIEYHVK---KCDVI 72 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh---cc---CCCeEEEeCCCCCCHHHHHHHHc---CCCEE
Confidence 47999999999999999999986 69999999876433221 11 235888999998 6777777766 68999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||+|+...+.. ..++.+..+++|+.++.++++++.. . ..++|++||...+.. .... .+.++..+
T Consensus 73 iH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~----~~~~v~~SS~~vyg~-~~~~---~~~ee~~~ 136 (347)
T PRK11908 73 LPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVK----Y----GKHLVFPSTSEVYGM-CPDE---EFDPEASP 136 (347)
T ss_pred EECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHHHh----c----CCeEEEEecceeecc-CCCc---CcCccccc
Confidence 99999754432 1223356789999999998888752 2 248999999765431 1100 00000000
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
....+...... .|+.||.+.+.+.+.++.+ .|+++..+.|+.+..|.
T Consensus 137 ~~~~~~~~p~~-----------------~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 137 LVYGPINKPRW-----------------IYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPG 183 (347)
T ss_pred cccCcCCCccc-----------------hHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCC
Confidence 00000001122 7999999999888887765 47888888887776654
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.7e-13 Score=130.26 Aligned_cols=190 Identities=15% Similarity=0.014 Sum_probs=128.5
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
++...+-=++++++||||+|.||++++++|.++|++|++++|....... .. ...+.++.+|++|.+.+.++++
T Consensus 12 ~~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~------~~-~~~~~~~~~Dl~d~~~~~~~~~ 84 (370)
T PLN02695 12 EREPYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS------ED-MFCHEFHLVDLRVMENCLKVTK 84 (370)
T ss_pred CCCCCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc------cc-cccceEEECCCCCHHHHHHHHh
Confidence 4444555578999999999999999999999999999999986432110 00 1124678899999998888776
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
.+|+|||+|+..........+ ....+..|+.++.++++++.. .+ ..++|++||...+... ....
T Consensus 85 ---~~D~Vih~Aa~~~~~~~~~~~---~~~~~~~N~~~t~nll~aa~~----~~---vk~~V~~SS~~vYg~~-~~~~-- 148 (370)
T PLN02695 85 ---GVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEAARI----NG---VKRFFYASSACIYPEF-KQLE-- 148 (370)
T ss_pred ---CCCEEEEcccccCCccccccC---chhhHHHHHHHHHHHHHHHHH----hC---CCEEEEeCchhhcCCc-cccC--
Confidence 689999999865432221112 234567899999999888743 22 4599999997654310 0000
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
.+....+.. ..++.+...|+.+|.+.+.+++.++.. .|+++..+.|+.+..|.
T Consensus 149 --~~~~~~E~~-----------------~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 201 (370)
T PLN02695 149 --TNVSLKESD-----------------AWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPF 201 (370)
T ss_pred --cCCCcCccc-----------------CCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCC
Confidence 000000000 012223338999999999998887665 48999999999988874
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.1e-13 Score=140.91 Aligned_cols=188 Identities=14% Similarity=0.145 Sum_probs=127.1
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHH-HHHHHH
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA-VKTALD 107 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~-v~~~~~ 107 (366)
|...--++++++||||+|.||++++++|+++ |++|+.++|+....... .. ..++.++.+|++|.++ ++++++
T Consensus 308 ~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~~---~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 308 PACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---LG---HPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred chhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---cC---CCceEEEeccccCcHHHHHHHhc
Confidence 3444456889999999999999999999986 79999999976532221 11 2357888999999665 455665
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
.+|+|||+|+...+.... ++.+..+++|+.++.++++++... ..++|++||...+... .. .
T Consensus 382 ---~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~--------~~~~V~~SS~~vyg~~-~~---~ 442 (660)
T PRK08125 382 ---KCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVKY--------NKRIIFPSTSEVYGMC-TD---K 442 (660)
T ss_pred ---CCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHhc--------CCeEEEEcchhhcCCC-CC---C
Confidence 699999999976543211 223457889999999999988632 1489999997654310 00 0
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
.++++.......+... +...|+.||.+.+.+++.++.+ +|+++..+.|+.+..|.
T Consensus 443 ~~~E~~~~~~~~p~~~-----------------p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 443 YFDEDTSNLIVGPINK-----------------QRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPR 497 (660)
T ss_pred CcCccccccccCCCCC-----------------CccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCC
Confidence 0000000000000001 1127999999999998887765 37899999999888774
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-13 Score=126.47 Aligned_cols=169 Identities=18% Similarity=0.193 Sum_probs=128.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC--CeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
+++||||||+|-||.+++.+|.++|+.|+++|.=..........+++..+ ..+.+++.|++|.+.++++++.++ +|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~-fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVK-FDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcC-Cce
Confidence 68999999999999999999999999999998755444445555555444 789999999999999999999984 999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|+|.|+....+. +.+........|+.|+++++..+..+- ...+|+.||...+..+-+ -.
T Consensus 81 V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~~~~~-------~~~~V~sssatvYG~p~~----------ip 139 (343)
T KOG1371|consen 81 VMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVMKAHN-------VKALVFSSSATVYGLPTK----------VP 139 (343)
T ss_pred EEeehhhhccch----hhhCchhheehhhhhHHHHHHHHHHcC-------CceEEEecceeeecCcce----------ee
Confidence 999999765443 444457889999999999888875443 458999999776651110 11
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI 244 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~ 244 (366)
++.+.+... +...|+.+|.+++...+.....+.
T Consensus 140 ~te~~~t~~-----------------p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 140 ITEEDPTDQ-----------------PTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred ccCcCCCCC-----------------CCCcchhhhHHHHHHHHhhhcccc
Confidence 111111221 333899999999999988887654
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.4e-13 Score=123.19 Aligned_cols=191 Identities=16% Similarity=0.098 Sum_probs=126.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||+|.||.+++++|.++|++|++++|+ .+|+.+.++++++++.. .+|++||+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~-~~d~vi~~ 57 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAI-RPDAVVNT 57 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhC-CCCEEEEC
Confidence 37999999999999999999999999999885 46999999999998864 58999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||...... ..+..+..+++|+.++.++++++.. . ..++|++||...+... .. ..++
T Consensus 58 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~----~~~~v~~Ss~~vy~~~-~~---~~~~-------- 113 (287)
T TIGR01214 58 AAYTDVDG----AESDPEKAFAVNALAPQNLARAAAR----H----GARLVHISTDYVFDGE-GK---RPYR-------- 113 (287)
T ss_pred Cccccccc----cccCHHHHHHHHHHHHHHHHHHHHH----c----CCeEEEEeeeeeecCC-CC---CCCC--------
Confidence 99654321 1223456789999999999998742 2 2489999997544310 00 0000
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh-h----hhh---cC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE-E----ENK---RR 270 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~-~----~~~---~~ 270 (366)
+..+..+...|+.+|.+.+.+++.+ +.++..+.|+.+..+... . ... ..
T Consensus 114 ----------------E~~~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~ 170 (287)
T TIGR01214 114 ----------------EDDATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRG 170 (287)
T ss_pred ----------------CCCCCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcC
Confidence 0001111237999999888777654 457889999988776421 1 000 00
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
......-.....++..+++++.+...+..
T Consensus 171 ~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 199 (287)
T TIGR01214 171 EELRVVDDQIGSPTYAKDLARVIAALLQR 199 (287)
T ss_pred CCceEecCCCcCCcCHHHHHHHHHHHHhh
Confidence 00000000112345678888887777643
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.2e-13 Score=138.13 Aligned_cols=225 Identities=15% Similarity=0.089 Sum_probs=143.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKE--GARVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
..++|++|||||+|.||++++++|+++ |++|+.++|.. +..+.... .....++.++.+|++|.+.+.+++...
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~ 79 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP---SKSSPNFKFVKGDIASADLVNYLLITE 79 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh---cccCCCeEEEECCCCChHHHHHHHhhc
Confidence 456789999999999999999999998 67899888753 22221111 111346889999999999888776433
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
.+|+|||+|+...... ..++....+++|+.++.++++++... + ...++|++||...+..+.... .
T Consensus 80 -~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~--~vkr~I~~SS~~vyg~~~~~~---~- 144 (668)
T PLN02260 80 -GIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT----G--QIRRFIHVSTDEVYGETDEDA---D- 144 (668)
T ss_pred -CCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHhc----C--CCcEEEEEcchHHhCCCcccc---c-
Confidence 6999999999754321 22233567899999999998887432 1 145999999976543100000 0
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh----
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE---- 265 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~---- 265 (366)
. ...+..+..+...|+.||.+.+.+++.++.++ ++++..+.|+.|..+....
T Consensus 145 ----~-----------------~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~~~i 200 (668)
T PLN02260 145 ----V-----------------GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI 200 (668)
T ss_pred ----c-----------------CccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCcccHH
Confidence 0 00011111223379999999999998877653 7899999999888764211
Q ss_pred --hhhc--CCcchhhhhc---cCCCCCHHHHHHHHHhhhhCC
Q 017757 266 --ENKR--RPRLTSIIAA---SSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 266 --~~~~--~~~~~~~~~~---~~~~~~~~~~a~~~~~~i~~g 300 (366)
+... .......... ...++..+++++.+...+..+
T Consensus 201 ~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~ 242 (668)
T PLN02260 201 PKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242 (668)
T ss_pred HHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC
Confidence 0000 0000000000 012467899999888776543
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.8e-13 Score=125.32 Aligned_cols=175 Identities=19% Similarity=0.162 Sum_probs=126.6
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
+|||||+|.||++++++|.++|++|+.++|......... ..+.++.+|+++.+.+.+..+... |.+||+|
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~--d~vih~a 72 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVP--DAVIHLA 72 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCC--CEEEEcc
Confidence 999999999999999999999999999999876544322 356789999999977777777443 9999999
Q ss_pred CCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccC
Q 017757 120 GVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSG 199 (366)
Q Consensus 120 G~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (366)
+........ .. ..+..+++|+.++.++++++.. .+ ..++|+.||.+....+ .
T Consensus 73 a~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa~~----~~---~~~~v~~ss~~~~~~~---~--------------- 124 (314)
T COG0451 73 AQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAARA----AG---VKRFVFASSVSVVYGD---P--------------- 124 (314)
T ss_pred ccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHHHH----cC---CCeEEEeCCCceECCC---C---------------
Confidence 976543211 11 4556899999999999999965 12 5689996665555411 0
Q ss_pred CCCCCcccccccccccc-ccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 200 KGHGGYHVTSWRELSGQ-FCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 200 ~~~~~~~~~~~~~~~~~-~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+... ..+. .+..+...|+.||.+.+.+++.... ..|+.+..+.|+.+..+...
T Consensus 125 ---~~~~------~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 125 ---PPLP------IDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred ---CCCC------cccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCC
Confidence 0000 0010 1111111799999999999998888 46899999999888776543
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.2e-13 Score=126.43 Aligned_cols=167 Identities=16% Similarity=0.128 Sum_probs=108.9
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh------cCCCc
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE------AGPVD 113 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~------~~~id 113 (366)
++||||+|.||++++++|+++|++++++.|+....... .. ...+|+.|..+.+.++++ ++++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~d 70 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN----------LVDLDIADYMDKEDFLAQIMAGDDFGDIE 70 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh----------hhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence 79999999999999999999999766665554332111 01 123466665544444432 34799
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
+|||+|+...... .+. +.+++.|+.++.++++++.. . ..++|++||...+..+ .. .
T Consensus 71 ~Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~~----~----~~~~i~~SS~~vyg~~-~~----~----- 126 (308)
T PRK11150 71 AIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLE----R----EIPFLYASSAATYGGR-TD----D----- 126 (308)
T ss_pred EEEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHHH----c----CCcEEEEcchHHhCcC-CC----C-----
Confidence 9999998644321 122 34689999999999888742 2 2369999998655310 00 0
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
.. .+..+..+...|+.||.+.+.+++.++.+ .++++..+.|+.+..+.
T Consensus 127 ~~------------------~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~ 174 (308)
T PRK11150 127 FI------------------EEREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPR 174 (308)
T ss_pred CC------------------ccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCC
Confidence 00 00011112237999999998888877654 37888888888887764
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.7e-13 Score=125.43 Aligned_cols=156 Identities=15% Similarity=0.074 Sum_probs=107.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++|||||+|.||++++++|.++| +|+.++|... .+..|++|.++++++++.. ++|+|||+
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~-~~D~Vih~ 61 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKI-RPDVIVNA 61 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhc-CCCEEEEC
Confidence 69999999999999999999999 7888887531 2357999999999999865 58999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
|+...... ..++-+..+++|+.++.++++++... ..++|++||...+..+
T Consensus 62 Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~~--------g~~~v~~Ss~~Vy~~~------------------ 111 (299)
T PRK09987 62 AAHTAVDK----AESEPEFAQLLNATSVEAIAKAANEV--------GAWVVHYSTDYVFPGT------------------ 111 (299)
T ss_pred CccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEccceEECCC------------------
Confidence 99765432 12233556789999999999988532 2479999997654310
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
... +..+..+..+...|+.||.+.+.+++....+ ...+.|+.+..|
T Consensus 112 ----~~~------p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~-------~~ilR~~~vyGp 157 (299)
T PRK09987 112 ----GDI------PWQETDATAPLNVYGETKLAGEKALQEHCAK-------HLIFRTSWVYAG 157 (299)
T ss_pred ----CCC------CcCCCCCCCCCCHHHHHHHHHHHHHHHhCCC-------EEEEecceecCC
Confidence 000 0001111122237999999998887655332 245556555544
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-12 Score=122.61 Aligned_cols=172 Identities=13% Similarity=0.067 Sum_probs=115.2
Q ss_pred EEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH-hcCCCcEEEE
Q 017757 40 VFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD-EAGPVDVLVV 117 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~-~~~~id~vi~ 117 (366)
+|||||+|.||.+++++|.++|+ +|++++|..... .. .++ . ...+..|+++.+.++.+.+ .+.++|+|||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~----~--~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh 72 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL----A--DLVIADYIDKEDFLDRLEKGAFGKIEAIFH 72 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh----h--heeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence 58999999999999999999998 688888754321 11 111 1 1346778888888877766 3468999999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+|+.... +.++.+..+++|+.++.++++++... ..++|++||...+..+ . .. ..+.
T Consensus 73 ~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~--------~~~~v~~SS~~vy~~~-~----~~-----~~e~ 128 (314)
T TIGR02197 73 QGACSDT------TETDGEYMMENNYQYSKRLLDWCAEK--------GIPFIYASSAATYGDG-E----AG-----FREG 128 (314)
T ss_pred CccccCc------cccchHHHHHHHHHHHHHHHHHHHHh--------CCcEEEEccHHhcCCC-C----CC-----cccc
Confidence 9996432 23345678899999999999987532 2479999997654310 0 00 0000
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
. +...... .|+.||.+.+.+++....+.. .++++..+.|+.+..+.
T Consensus 129 ~-~~~~p~~-----------------~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~lR~~~vyG~~ 174 (314)
T TIGR02197 129 R-ELERPLN-----------------VYGYSKFLFDQYVRRRVLPEA-LSAQVVGLRYFNVYGPR 174 (314)
T ss_pred c-CcCCCCC-----------------HHHHHHHHHHHHHHHHhHhhc-cCCceEEEEEeeccCCC
Confidence 0 0011223 799999999988876433321 25677778887776664
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.9e-12 Score=126.32 Aligned_cols=178 Identities=16% Similarity=0.082 Sum_probs=117.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHH-HHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEE-AKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~-~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++++++||||+|.||++++++|.++|++|++++|......+ ....+ ...++.++..|+.++. + ..+|+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~---~~~~~~~i~~D~~~~~-----l---~~~D~ 186 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF---SNPNFELIRHDVVEPI-----L---LEVDQ 186 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc---cCCceEEEECCccChh-----h---cCCCE
Confidence 57899999999999999999999999999999875432211 11111 1235777888987753 2 25899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|||+|+...+.... ++....+++|+.++.++++++... ..++|++||...+.... . .... +..
T Consensus 187 ViHlAa~~~~~~~~----~~p~~~~~~Nv~gt~nLleaa~~~--------g~r~V~~SS~~VYg~~~-~---~p~~-E~~ 249 (442)
T PLN02206 187 IYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEVYGDPL-Q---HPQV-ETY 249 (442)
T ss_pred EEEeeeecchhhhh----cCHHHHHHHHHHHHHHHHHHHHHh--------CCEEEEECChHHhCCCC-C---CCCC-ccc
Confidence 99999875442211 123568899999999999988532 23899999986553110 0 0000 000
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
.. .. .+..+...|+.||.+.+.+++.+... .++++..+.|+.+..+.
T Consensus 250 ~~-~~-----------------~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 250 WG-NV-----------------NPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPR 296 (442)
T ss_pred cc-cC-----------------CCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCC
Confidence 00 00 01112238999999998888877655 37888888887776653
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.3e-12 Score=120.45 Aligned_cols=164 Identities=13% Similarity=0.101 Sum_probs=113.0
Q ss_pred EEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 41 FITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 41 LITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
|||||+|.||.+++++|.++|++|+++.+. ..+|+++.++++++++.. ++|+|||+|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~-~~d~Vih~A~ 58 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKE-KPTYVILAAA 58 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhcc-CCCEEEEeee
Confidence 699999999999999999999988765432 147999999999998876 5799999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCC
Q 017757 121 VFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGK 200 (366)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (366)
....... ..++....+++|+.++..+++++... + ..++|++||...+. +.. .....++...+ .+
T Consensus 59 ~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~----~---~~~~i~~SS~~vyg-~~~---~~~~~E~~~~~--~~ 122 (306)
T PLN02725 59 KVGGIHA---NMTYPADFIRENLQIQTNVIDAAYRH----G---VKKLLFLGSSCIYP-KFA---PQPIPETALLT--GP 122 (306)
T ss_pred eecccch---hhhCcHHHHHHHhHHHHHHHHHHHHc----C---CCeEEEeCceeecC-CCC---CCCCCHHHhcc--CC
Confidence 7432110 11223456889999999999888532 2 45899999975433 000 00000000000 00
Q ss_pred CCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 201 GHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
..|... .|+.||.+.+.+.+.+.++. ++++..+.|+.+..+.
T Consensus 123 ~~p~~~-----------------~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 164 (306)
T PLN02725 123 PEPTNE-----------------WYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPH 164 (306)
T ss_pred CCCCcc-----------------hHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence 111112 59999999998888877664 7899999999888774
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-11 Score=122.81 Aligned_cols=179 Identities=17% Similarity=0.082 Sum_probs=117.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+.++++||||+|.||++++++|.++|++|++++|......+....+. ...++.++..|+.+.. + .++|+|
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~-----~---~~~D~V 188 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEPI-----L---LEVDQI 188 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc--cCCceEEEECcccccc-----c---cCCCEE
Confidence 35689999999999999999999999999999986432111111111 1235677888887642 2 268999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||+|+...+.... ++....+++|+.++.++++++... ..++|++||...+..+. . ...+++...
T Consensus 189 iHlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~~~--------g~r~V~~SS~~VYg~~~-~---~p~~E~~~~ 252 (436)
T PLN02166 189 YHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV--------GARFLLTSTSEVYGDPL-E---HPQKETYWG 252 (436)
T ss_pred EECceeccchhhc----cCHHHHHHHHHHHHHHHHHHHHHh--------CCEEEEECcHHHhCCCC-C---CCCCccccc
Confidence 9999865442211 123578999999999999888532 23899999976553110 0 000000000
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
...+..+...|+.||.+.+.+++.++.. .++++..+.|+.+..+.
T Consensus 253 -------------------~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 253 -------------------NVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPR 297 (436)
T ss_pred -------------------cCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCC
Confidence 0001112237999999999888877664 37888888887776664
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=107.53 Aligned_cols=181 Identities=18% Similarity=0.153 Sum_probs=121.0
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
|+|+||+|.+|+.++++|.++|++|+++.|++++.++ ..++..+++|+.|++++.+.++ +.|++|+++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~---~~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALK---GADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHT---TSSEEEECC
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhh---hcchhhhhh
Confidence 6899999999999999999999999999999987765 4578999999999999999888 789999999
Q ss_pred CCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccC
Q 017757 120 GVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSG 199 (366)
Q Consensus 120 G~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (366)
|.... + ...++.+++.+++.+ ..+++++||......+.... . .
T Consensus 69 ~~~~~---------~------------~~~~~~~~~a~~~~~---~~~~v~~s~~~~~~~~~~~~-----~--------~ 111 (183)
T PF13460_consen 69 GPPPK---------D------------VDAAKNIIEAAKKAG---VKRVVYLSSAGVYRDPPGLF-----S--------D 111 (183)
T ss_dssp HSTTT---------H------------HHHHHHHHHHHHHTT---SSEEEEEEETTGTTTCTSEE-----E--------G
T ss_pred hhhcc---------c------------ccccccccccccccc---cccceeeeccccCCCCCccc-----c--------c
Confidence 75432 0 445566666666654 56999999976554100000 0 0
Q ss_pred CCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhc
Q 017757 200 KGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAA 279 (366)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~ 279 (366)
...+... .|...|...+.+. ...+++...+.|+.+..+.......... ....
T Consensus 112 ~~~~~~~-----------------~~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~----~~~~ 163 (183)
T PF13460_consen 112 EDKPIFP-----------------EYARDKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKE----GGPQ 163 (183)
T ss_dssp GTCGGGH-----------------HHHHHHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESS----TSTT
T ss_pred ccccchh-----------------hhHHHHHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEec----cCCC
Confidence 0001112 5666666554333 1348999999999887764221110000 0011
Q ss_pred cCCCCCHHHHHHHHHhhh
Q 017757 280 SSGAMKADEVAKKALDGI 297 (366)
Q Consensus 280 ~~~~~~~~~~a~~~~~~i 297 (366)
....++.+++|+.+++.+
T Consensus 164 ~~~~i~~~DvA~~~~~~l 181 (183)
T PF13460_consen 164 GVNFISREDVAKAIVEAL 181 (183)
T ss_dssp SHCEEEHHHHHHHHHHHH
T ss_pred CcCcCCHHHHHHHHHHHh
Confidence 113456777777766554
|
... |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-11 Score=115.69 Aligned_cols=147 Identities=14% Similarity=0.139 Sum_probs=107.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||+|.||++++++|.++|++|++++|+.++.... . ...+.++.+|++|++++.++++ .+|+|||+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~---~~~v~~v~~Dl~d~~~l~~al~---g~d~Vi~~ 71 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----K---EWGAELVYGDLSLPETLPPSFK---GVTAIIDA 71 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----h---hcCCEEEECCCCCHHHHHHHHC---CCCEEEEC
Confidence 699999999999999999999999999999986543221 1 1257889999999999988887 68999998
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
++.... +.....++|+.++.++++++.. .+ ..++|++||.....
T Consensus 72 ~~~~~~---------~~~~~~~~~~~~~~~l~~aa~~----~g---vkr~I~~Ss~~~~~-------------------- 115 (317)
T CHL00194 72 STSRPS---------DLYNAKQIDWDGKLALIEAAKA----AK---IKRFIFFSILNAEQ-------------------- 115 (317)
T ss_pred CCCCCC---------CccchhhhhHHHHHHHHHHHHH----cC---CCEEEEeccccccc--------------------
Confidence 764211 1233566888888888877743 22 45999999854321
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
. ... .|..+|...+.+.+ ..++++..+.|+.+.
T Consensus 116 ---~-~~~-----------------~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~ 148 (317)
T CHL00194 116 ---Y-PYI-----------------PLMKLKSDIEQKLK-------KSGIPYTIFRLAGFF 148 (317)
T ss_pred ---c-CCC-----------------hHHHHHHHHHHHHH-------HcCCCeEEEeecHHh
Confidence 0 112 57778887665543 247888888887543
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.5e-11 Score=120.32 Aligned_cols=130 Identities=10% Similarity=0.173 Sum_probs=92.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCchh--HH-HHHHHH---------Hhhc--------CCeE
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGKK--LE-EAKQSI---------QLAT--------GIEV 89 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~---~V~l~~r~~~~--~~-~~~~~l---------~~~~--------~~~v 89 (366)
..++||+++||||||.||..++++|++.+. +|++..|.... .. ....++ .... ..++
T Consensus 7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 347899999999999999999999998643 57888886532 11 111111 1111 1578
Q ss_pred EEEEecCC-------CHHHHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 017757 90 ATYSADVR-------DFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN 162 (366)
Q Consensus 90 ~~~~~Dls-------~~~~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~ 162 (366)
.++..|++ +.+.++++++ .+|+|||+|+..... ++.+..+++|+.|+.++++.+...- +
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~---~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~---~- 152 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWK---EIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKCV---K- 152 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHh---CCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhcC---C-
Confidence 99999998 4455667766 689999999965421 2356789999999999998875321 1
Q ss_pred CCCcEEEEecCCcccc
Q 017757 163 GGPASIALMSSQAGQC 178 (366)
Q Consensus 163 ~~~g~iv~vsS~~~~~ 178 (366)
..+++++||.....
T Consensus 153 --~k~~V~vST~~vyG 166 (491)
T PLN02996 153 --VKMLLHVSTAYVCG 166 (491)
T ss_pred --CCeEEEEeeeEEec
Confidence 35899999977654
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.3e-12 Score=114.85 Aligned_cols=180 Identities=13% Similarity=0.072 Sum_probs=101.8
Q ss_pred EEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHH----Hh---------hcCCeEEEEEecCCCH------H
Q 017757 42 ITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSI----QL---------ATGIEVATYSADVRDF------D 100 (366)
Q Consensus 42 ITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l----~~---------~~~~~v~~~~~Dls~~------~ 100 (366)
||||||.||.++.++|++++. +|++..|..+.. +..+.+ .. ....+++++..|++++ +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~-~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~ 79 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQ-SALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE 79 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHH-HHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccc-cchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence 799999999999999999986 899999976431 222222 11 1257899999999985 4
Q ss_pred HHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 101 AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 101 ~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
..+++.+ .+|+|||||+...... .+++..++|+.|+..+++.+. ..+ ..+++++||.......
T Consensus 80 ~~~~L~~---~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~----~~~---~~~~~~iSTa~v~~~~ 142 (249)
T PF07993_consen 80 DYQELAE---EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAA----QGK---RKRFHYISTAYVAGSR 142 (249)
T ss_dssp HHHHHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHT----SSS------EEEEEEGGGTTS-
T ss_pred Hhhcccc---ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHH----hcc---CcceEEeccccccCCC
Confidence 5666666 6899999998654321 234477899999999998884 111 3499999993221100
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
......+... ...............|..||...+.+.+..+.+ .|+.+..+.||.|-.
T Consensus 143 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 143 PGTIEEKVYP-------------------EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVG 200 (249)
T ss_dssp TTT--SSS-H-------------------HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-
T ss_pred CCcccccccc-------------------cccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccc
Confidence 0000000000 000011111223338999999999999888876 378999999998866
Q ss_pred C
Q 017757 261 P 261 (366)
Q Consensus 261 ~ 261 (366)
.
T Consensus 201 ~ 201 (249)
T PF07993_consen 201 D 201 (249)
T ss_dssp S
T ss_pred c
Confidence 3
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.7e-10 Score=94.89 Aligned_cols=201 Identities=16% Similarity=0.129 Sum_probs=144.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc------
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA------ 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~------ 109 (366)
+-++++|-||-|.+|.+++..|-.+++-|.-++.++.+..+ .-+.+..|-+=.++-+.+.++.
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad-----------~sI~V~~~~swtEQe~~v~~~vg~sL~g 70 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD-----------SSILVDGNKSWTEQEQSVLEQVGSSLQG 70 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc-----------ceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence 45689999999999999999999999999888876653211 1223444444445555555542
Q ss_pred CCCcEEEEcCCCCCCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQ-SLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
.++|.+++.||.+..+....- -.+..+-|+.-.+..+..-.+....++++ .|-+-..+.-++..
T Consensus 71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~-----GGLL~LtGAkaAl~---------- 135 (236)
T KOG4022|consen 71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP-----GGLLQLTGAKAALG---------- 135 (236)
T ss_pred cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-----CceeeecccccccC----------
Confidence 589999999998766543311 23444556677777776666666666665 45666666666665
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc--cCCcEEEEEcCCCCCCCChhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.|+.. .|+++|+|+.+|+++|+.+-. |.|--+.+|.|=..+|||.+++
T Consensus 136 ------------gTPgMI-----------------GYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKw 186 (236)
T KOG4022|consen 136 ------------GTPGMI-----------------GYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKW 186 (236)
T ss_pred ------------CCCccc-----------------chhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccccc
Confidence 888888 999999999999999998765 6788889999999999999987
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
.... ....+.+-+.+.+.+++.+..
T Consensus 187 MP~A--------DfssWTPL~fi~e~flkWtt~ 211 (236)
T KOG4022|consen 187 MPNA--------DFSSWTPLSFISEHFLKWTTE 211 (236)
T ss_pred CCCC--------cccCcccHHHHHHHHHHHhcc
Confidence 6542 122345667777777777643
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-10 Score=108.36 Aligned_cols=183 Identities=15% Similarity=0.151 Sum_probs=140.5
Q ss_pred CCEEEEEcC-CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC-
Q 017757 37 DRHVFITGG-SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG- 110 (366)
Q Consensus 37 gk~vLITGa-s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~- 110 (366)
..+|+|.|. +.-|++.+|..|-++|+-|+++..+.++.+...++ ...++.....|..++.++...+++ +.
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e----~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~ 78 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE----DRPDIRPLWLDDSDPSSIHASLSRFASLLSR 78 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc----cCCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence 467889995 78999999999999999999999987765443332 234688888898776665555444 22
Q ss_pred -------------CCcEEEEcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 111 -------------PVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 111 -------------~id~vi~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
.+..||...... ..++++.++.+.|.+.++.|+..++.++|.++|+++.+...+..-|++.-|+..
T Consensus 79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s 158 (299)
T PF08643_consen 79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS 158 (299)
T ss_pred CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence 234455555433 458899999999999999999999999999999999843221334444446555
Q ss_pred ccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC
Q 017757 177 QCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP 256 (366)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG 256 (366)
.. ..|..+ .-++..+|+.+|+++|++|+.+++|+|..+.-|
T Consensus 159 sl----------------------~~Pfhs-----------------pE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG 199 (299)
T PF08643_consen 159 SL----------------------NPPFHS-----------------PESIVSSALSSFFTSLRRELRPHNIDVTQIKLG 199 (299)
T ss_pred cc----------------------CCCccC-----------------HHHHHHHHHHHHHHHHHHHhhhcCCceEEEEee
Confidence 44 556666 788899999999999999999999999999999
Q ss_pred CCCCCC
Q 017757 257 DTETPG 262 (366)
Q Consensus 257 ~v~T~~ 262 (366)
.++-..
T Consensus 200 ~l~i~~ 205 (299)
T PF08643_consen 200 NLDIGN 205 (299)
T ss_pred eecccc
Confidence 887663
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.2e-10 Score=121.53 Aligned_cols=172 Identities=18% Similarity=0.169 Sum_probs=115.0
Q ss_pred EEEEEcCCChhHHHHHHHHH--HCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH------HHHHHHHHhcC
Q 017757 39 HVFITGGSSGIGLALAHQAA--KEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF------DAVKTALDEAG 110 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~--~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~------~~v~~~~~~~~ 110 (366)
++|||||+|.||++++++|+ ++|++|++++|+... .............++.++.+|++|+ +.++++ .
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~ 76 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G 76 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence 69999999999999999999 589999999996532 2221111111125788999999994 344444 4
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
.+|+|||+|+..... .+ .+...++|+.++.++++++.. .+ ..++|++||...+..... ..+
T Consensus 77 ~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~----~~---~~~~v~~SS~~v~g~~~~-----~~~ 137 (657)
T PRK07201 77 DIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELAER----LQ---AATFHHVSSIAVAGDYEG-----VFR 137 (657)
T ss_pred CCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHHHh----cC---CCeEEEEeccccccCccC-----ccc
Confidence 799999999965332 12 245678999999988887743 22 458999999766531100 000
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
++.. ..+.... ..|+.||.+.+.+.+. ..|+++..+.|+.|..+
T Consensus 138 e~~~----~~~~~~~-----------------~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~ 181 (657)
T PRK07201 138 EDDF----DEGQGLP-----------------TPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD 181 (657)
T ss_pred cccc----hhhcCCC-----------------CchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence 0000 0001111 2799999999887753 24799999999998765
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.2e-11 Score=113.25 Aligned_cols=153 Identities=18% Similarity=0.097 Sum_probs=100.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++|||||+|-||.++.++|.++|++|+.++|+ .+|++|.+++.+++++. ++|+|||+
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~-~pd~Vin~ 58 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAF-KPDVVINC 58 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH---SEEEE-
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHh-CCCeEecc
Confidence 68999999999999999999999999999776 57999999999999987 59999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||+..+. .-.++-+..+++|+.++..+.+.+... ..++|++||..-+.+.
T Consensus 59 aa~~~~~----~ce~~p~~a~~iN~~~~~~la~~~~~~--------~~~li~~STd~VFdG~------------------ 108 (286)
T PF04321_consen 59 AAYTNVD----ACEKNPEEAYAINVDATKNLAEACKER--------GARLIHISTDYVFDGD------------------ 108 (286)
T ss_dssp -----HH----HHHHSHHHHHHHHTHHHHHHHHHHHHC--------T-EEEEEEEGGGS-SS------------------
T ss_pred ceeecHH----hhhhChhhhHHHhhHHHHHHHHHHHHc--------CCcEEEeeccEEEcCC------------------
Confidence 9975332 123445678999999999999998532 4699999997655311
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
.+.. ..+..+..+...|+.+|...+...+.... +...+.++++..+
T Consensus 109 ----~~~~------y~E~d~~~P~~~YG~~K~~~E~~v~~~~~-------~~~IlR~~~~~g~ 154 (286)
T PF04321_consen 109 ----KGGP------YTEDDPPNPLNVYGRSKLEGEQAVRAACP-------NALILRTSWVYGP 154 (286)
T ss_dssp ----TSSS------B-TTS----SSHHHHHHHHHHHHHHHH-S-------SEEEEEE-SEESS
T ss_pred ----cccc------cccCCCCCCCCHHHHHHHHHHHHHHHhcC-------CEEEEecceeccc
Confidence 0000 01111122233899999988777666222 3444555555444
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=6e-10 Score=105.29 Aligned_cols=185 Identities=16% Similarity=0.115 Sum_probs=124.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHH----------hhcCCeEEEEEecCCCH------H
Q 017757 38 RHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQ----------LATGIEVATYSADVRDF------D 100 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~----------~~~~~~v~~~~~Dls~~------~ 100 (366)
+++++|||||.+|+.+.++|..+ .++|++..|.++. |.+.+.++ +....+++.+..|++.+ .
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~-E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSD-EAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCH-HHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 57999999999999999999987 4689999886542 22222222 23357899999999954 4
Q ss_pred HHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 101 AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 101 ~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
..+++.+ .+|.+||||+....- ....+....|+.|+..+++.+. +. +...+.+|||++.....
T Consensus 80 ~~~~La~---~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa~-----~g--k~Kp~~yVSsisv~~~~ 142 (382)
T COG3320 80 TWQELAE---NVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLAA-----TG--KPKPLHYVSSISVGETE 142 (382)
T ss_pred HHHHHhh---hcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHHh-----cC--CCceeEEEeeeeecccc
Confidence 5666666 789999999864321 1245677899999999888774 21 14569999998765422
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
........+. ++...... .......|+.||-+.+.+++.... .|++|..+.||+|-.
T Consensus 143 ~~~~~~~~~~----~~~~~~~~---------------~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~g 199 (382)
T COG3320 143 YYSNFTVDFD----EISPTRNV---------------GQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITG 199 (382)
T ss_pred ccCCCccccc----cccccccc---------------cCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeec
Confidence 2221111111 00000000 111223899999988888777665 489999999999976
Q ss_pred CCh
Q 017757 261 PGL 263 (366)
Q Consensus 261 ~~~ 263 (366)
+..
T Consensus 200 ds~ 202 (382)
T COG3320 200 DSR 202 (382)
T ss_pred cCc
Confidence 643
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-10 Score=111.00 Aligned_cols=186 Identities=19% Similarity=0.170 Sum_probs=128.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++.+++||||+|.+|++++++|.+++ .+|.++|..+..-.-..++. .....++.++.+|+.|..++.+.++ +.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~-~~~~~~v~~~~~D~~~~~~i~~a~~---~~- 77 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT-GFRSGRVTVILGDLLDANSISNAFQ---GA- 77 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh-cccCCceeEEecchhhhhhhhhhcc---Cc-
Confidence 67899999999999999999999998 78999998764211111111 1135688999999999999988888 66
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
.|+|+|....+.- ...+.+..+++|+.|+.++++.|...- ..++|++||..-....-+
T Consensus 78 ~Vvh~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c~~~~-------v~~lIYtSs~~Vvf~g~~----------- 135 (361)
T KOG1430|consen 78 VVVHCAASPVPDF----VENDRDLAMRVNVNGTLNVIEACKELG-------VKRLIYTSSAYVVFGGEP----------- 135 (361)
T ss_pred eEEEeccccCccc----cccchhhheeecchhHHHHHHHHHHhC-------CCEEEEecCceEEeCCee-----------
Confidence 7777776544432 233567899999999999988886443 459999999876651111
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
. .-++...+.|.-....|+.||+--+.+++.... ..+..-.++.|..|..|..+.
T Consensus 136 ~--------------~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~ 190 (361)
T KOG1430|consen 136 I--------------INGDESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKR 190 (361)
T ss_pred c--------------ccCCCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCcc
Confidence 0 000111111111112899999966666665554 346788899999998886544
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.9e-10 Score=103.92 Aligned_cols=103 Identities=24% Similarity=0.272 Sum_probs=87.2
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
+||||++|-+|.++++.|. .+.+|+.++|.. +|++|++.+.+++++. ++|+|||+|
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~-~PDvVIn~A 58 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRET-RPDVVINAA 58 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhh-CCCEEEECc
Confidence 8999999999999999999 778999888864 6999999999999987 799999999
Q ss_pred CCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 120 GVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 120 G~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
++..... ...+-+..+.+|..++.++.+++... ...+|++|+-+-+-
T Consensus 59 Ayt~vD~----aE~~~e~A~~vNa~~~~~lA~aa~~~--------ga~lVhiSTDyVFD 105 (281)
T COG1091 59 AYTAVDK----AESEPELAFAVNATGAENLARAAAEV--------GARLVHISTDYVFD 105 (281)
T ss_pred ccccccc----ccCCHHHHHHhHHHHHHHHHHHHHHh--------CCeEEEeecceEec
Confidence 9876543 23335678999999999999999543 46899999976553
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.5e-10 Score=106.84 Aligned_cols=91 Identities=13% Similarity=0.142 Sum_probs=68.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
+++|||||+|.||++++++|.++|++|+... .|+++.+.+...++.. ++|+|||
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------~~~~~~~~v~~~l~~~-~~D~ViH 63 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------GRLENRASLEADIDAV-KPTHVFN 63 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------CccCCHHHHHHHHHhc-CCCEEEE
Confidence 5799999999999999999999999987432 2345556666666554 5899999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 155 (366)
+||....... +...++....+++|+.++.++++++..
T Consensus 64 ~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~ 100 (298)
T PLN02778 64 AAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRE 100 (298)
T ss_pred CCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9997653211 112234567899999999999999854
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.4e-10 Score=117.76 Aligned_cols=167 Identities=19% Similarity=0.165 Sum_probs=118.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||+|.||++++++|+++|++|++++|+.... . ...+.++.+|++|.+++.++++ .+|+|||+
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~---~vD~VVHl 68 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMT---GADVVAHC 68 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHh---CCCEEEEC
Confidence 699999999999999999999999999999975321 1 1257789999999999999887 58999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
|+...+ .+++|+.++.++++++ ++.+ .+++|++||.
T Consensus 69 Aa~~~~-------------~~~vNv~GT~nLLeAa----~~~g---vkr~V~iSS~------------------------ 104 (854)
T PRK05865 69 AWVRGR-------------NDHINIDGTANVLKAM----AETG---TGRIVFTSSG------------------------ 104 (854)
T ss_pred CCcccc-------------hHHHHHHHHHHHHHHH----HHcC---CCeEEEECCc------------------------
Confidence 985321 3678999998877665 3332 4689999982
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhh
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIA 278 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~ 278 (366)
. |.+.+.+.+ ..++++..+.|+.+..+....+............
T Consensus 105 -------------------------~----K~aaE~ll~-------~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~ 148 (854)
T PRK05865 105 -------------------------H----QPRVEQMLA-------DCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPA 148 (854)
T ss_pred -------------------------H----HHHHHHHHH-------HcCCCEEEEEeceEeCCChHHHHHHHhcCceecc
Confidence 1 666665543 2478999999999887754332211100000000
Q ss_pred c----cCCCCCHHHHHHHHHhhhh
Q 017757 279 A----SSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 279 ~----~~~~~~~~~~a~~~~~~i~ 298 (366)
+ ....+..+++++.+...+.
T Consensus 149 G~~~~~~dfIhVdDVA~Ai~~aL~ 172 (854)
T PRK05865 149 GYADRVVQVVHSDDAQRLLVRALL 172 (854)
T ss_pred CCCCceEeeeeHHHHHHHHHHHHh
Confidence 0 0124678999998877764
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-09 Score=111.84 Aligned_cols=128 Identities=16% Similarity=0.198 Sum_probs=91.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCchh--HHHHH-HHH---------Hhhc--------CCeEEE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGKK--LEEAK-QSI---------QLAT--------GIEVAT 91 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~---~V~l~~r~~~~--~~~~~-~~l---------~~~~--------~~~v~~ 91 (366)
++||+++||||||.||..++++|++.+. +|++..|..+. ..+.. +++ ++.. ..++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 6799999999999999999999998754 67888886432 11111 121 1111 246899
Q ss_pred EEecCCCH------HHHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 017757 92 YSADVRDF------DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGP 165 (366)
Q Consensus 92 ~~~Dls~~------~~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~ 165 (366)
+..|++++ +..+.+.+ .+|+|||+|+.... .+..+..+++|+.|+.++++.+... + ..
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~---~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~----~--~l 260 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAK---EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC----K--KL 260 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHh---cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc----C--CC
Confidence 99999997 34555555 59999999987542 1346778999999999999887532 1 13
Q ss_pred cEEEEecCCcccc
Q 017757 166 ASIALMSSQAGQC 178 (366)
Q Consensus 166 g~iv~vsS~~~~~ 178 (366)
.+++++||.+...
T Consensus 261 k~fV~vSTayVyG 273 (605)
T PLN02503 261 KLFLQVSTAYVNG 273 (605)
T ss_pred CeEEEccCceeec
Confidence 4799999976554
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.07 E-value=9.1e-10 Score=99.76 Aligned_cols=192 Identities=15% Similarity=0.086 Sum_probs=135.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHH---hhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ---LATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~---~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++|++||||-+|--|..+|+.|+++|+.|..+.|..+......-.+. -..+.++..+.+|++|..++.+++++. .+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-~P 79 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-QP 79 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-Cc
Confidence 47999999999999999999999999999998886433221110221 122456889999999999999999988 68
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|-+.|.|+.++.+ .+.++.+.+.+++..|+.+++.++.-+-.+ ..++..-||..-+. . ..
T Consensus 80 dEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~-----~~rfYQAStSE~fG-~----------v~ 139 (345)
T COG1089 80 DEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILGEK-----KTRFYQASTSELYG-L----------VQ 139 (345)
T ss_pred hhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhCCc-----ccEEEecccHHhhc-C----------cc
Confidence 9999999876654 355666778999999999999887544321 35777766654332 0 00
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc---cCCcEEEEEcCCCCCCCChhh
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI---ADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
..+. .+..|+.+-.+|+++|..-.-++.+.+..|. ..||-+|.=+|.-=.|=.+++
T Consensus 140 ~~pq-----------------~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRK 198 (345)
T COG1089 140 EIPQ-----------------KETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRK 198 (345)
T ss_pred cCcc-----------------ccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHH
Confidence 1111 1122333333999999988888888888764 568888888876444433343
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.8e-09 Score=100.93 Aligned_cols=98 Identities=22% Similarity=0.225 Sum_probs=68.8
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
+|||||+|.||.+++++|+++|++|++++|+......... .. ..|+.. +.+ .+.+..+|+|||+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~----~~~~~~-~~~---~~~~~~~D~Vvh~a 65 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-------EG----YKPWAP-LAE---SEALEGADAVINLA 65 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-------ee----eecccc-cch---hhhcCCCCEEEECC
Confidence 5899999999999999999999999999998765432110 01 112222 222 23345799999999
Q ss_pred CCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 120 GVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154 (366)
Q Consensus 120 G~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 154 (366)
|..... .+.+.+..+..+++|+.++..+++++.
T Consensus 66 ~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~ 98 (292)
T TIGR01777 66 GEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIA 98 (292)
T ss_pred CCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence 964321 123455667788999999988888874
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.1e-09 Score=109.10 Aligned_cols=158 Identities=12% Similarity=0.064 Sum_probs=101.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
.+++|||||+|.||++++++|.++|++|.. ...|++|.+.+++.+++. ++|+||
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------------~~~~l~d~~~v~~~i~~~-~pd~Vi 433 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------------GKGRLEDRSSLLADIRNV-KPTHVF 433 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------------eccccccHHHHHHHHHhh-CCCEEE
Confidence 346999999999999999999999988731 113678888888888776 689999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc-ccCccCccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK-NTNMKGINENKLC 195 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~ 195 (366)
|+|+....... +...++-+..+++|+.++.++++++... ..+++++||...+..... ..... ....
T Consensus 434 h~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~--------g~~~v~~Ss~~v~~~~~~~~~~~~----~p~~ 500 (668)
T PLN02260 434 NAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCREN--------GLLMMNFATGCIFEYDAKHPEGSG----IGFK 500 (668)
T ss_pred ECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc--------CCeEEEEcccceecCCcccccccC----CCCC
Confidence 99997643211 2233455788999999999999998642 235666666443221000 00000 0000
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEc
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIF 254 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~ 254 (366)
+. .++.+ ....|+.||.+.+.+++.... ...+|+..+.
T Consensus 501 E~-~~~~~-----------------~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~ 538 (668)
T PLN02260 501 EE-DKPNF-----------------TGSFYSKTKAMVEELLREYDN---VCTLRVRMPI 538 (668)
T ss_pred cC-CCCCC-----------------CCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence 00 01111 123899999999998887643 2356666555
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2e-08 Score=87.47 Aligned_cols=80 Identities=29% Similarity=0.404 Sum_probs=66.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id~ 114 (366)
+++||||+ |+|.+++++|+++|++|++++|++++.+.....+.. ..++.++.+|++|+++++++++. .+++|+
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~ 78 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL 78 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence 68999998 788889999999999999999998777666554532 45788899999999999888765 478999
Q ss_pred EEEcCCC
Q 017757 115 LVVNQGV 121 (366)
Q Consensus 115 vi~nAG~ 121 (366)
+|+..-.
T Consensus 79 lv~~vh~ 85 (177)
T PRK08309 79 AVAWIHS 85 (177)
T ss_pred EEEeccc
Confidence 9987754
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=7e-10 Score=110.78 Aligned_cols=128 Identities=14% Similarity=0.204 Sum_probs=88.4
Q ss_pred CCEEE----EEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 37 DRHVF----ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 37 gk~vL----ITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
|..++ |+||++|+|.++++.|...|++|+.+.+.+.+... .+..++
T Consensus 34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~------------------------------~~~~~~ 83 (450)
T PRK08261 34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA------------------------------GWGDRF 83 (450)
T ss_pred CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc------------------------------CcCCcc
Confidence 44555 88889999999999999999999988765441100 000134
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
+.++.-+-.. .+++++ .+.+.+++..++.|.+ .++||+++|..+..
T Consensus 84 ~~~~~d~~~~-------~~~~~l--------~~~~~~~~~~l~~l~~-----~griv~i~s~~~~~-------------- 129 (450)
T PRK08261 84 GALVFDATGI-------TDPADL--------KALYEFFHPVLRSLAP-----CGRVVVLGRPPEAA-------------- 129 (450)
T ss_pred cEEEEECCCC-------CCHHHH--------HHHHHHHHHHHHhccC-----CCEEEEEccccccC--------------
Confidence 4333322110 123332 2444667777777754 57999999975432
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
... .|+++|+|+.+++++++.|+ ++++++|+|.|+.
T Consensus 130 -----------~~~-----------------~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~ 165 (450)
T PRK08261 130 -----------ADP-----------------AAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP 165 (450)
T ss_pred -----------Cch-----------------HHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC
Confidence 223 69999999999999999999 7899999999885
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.9e-08 Score=113.54 Aligned_cols=191 Identities=12% Similarity=0.069 Sum_probs=119.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCC----CeEEEEecCchhHHHHHHHHHhh----------cCCeEEEEEecCCCH--
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEG----ARVSILARSGKKLEEAKQSIQLA----------TGIEVATYSADVRDF-- 99 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G----~~V~l~~r~~~~~~~~~~~l~~~----------~~~~v~~~~~Dls~~-- 99 (366)
..++++||||+|.||.+++++|++++ .+|++..|+....+. .+.+... ...++.++.+|++++
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence 35889999999999999999999987 789999997644322 2222111 123688999999854
Q ss_pred ----HHHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 100 ----DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 100 ----~~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+...++.+ .+|++||||+..... .+ +......|+.|+..+++.+.. .+ ..+++++||.+
T Consensus 1049 gl~~~~~~~l~~---~~d~iiH~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~----~~---~~~~v~vSS~~ 1111 (1389)
T TIGR03443 1049 GLSDEKWSDLTN---EVDVIIHNGALVHWV----YP---YSKLRDANVIGTINVLNLCAE----GK---AKQFSFVSSTS 1111 (1389)
T ss_pred CcCHHHHHHHHh---cCCEEEECCcEecCc----cC---HHHHHHhHHHHHHHHHHHHHh----CC---CceEEEEeCee
Confidence 44455544 789999999865321 12 233456799999999887742 22 45899999986
Q ss_pred cccccc-cccCccCc--cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEE
Q 017757 176 GQCWTI-KNTNMKGI--NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSL 252 (366)
Q Consensus 176 ~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~ 252 (366)
.+.... .+...... ......+.. . ....+......|+.||.+.+.+++..+. .|+++..
T Consensus 1112 v~~~~~~~~~~~~~~~~~~~~~~e~~--~------------~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i 1173 (1389)
T TIGR03443 1112 ALDTEYYVNLSDELVQAGGAGIPESD--D------------LMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCI 1173 (1389)
T ss_pred ecCcccccchhhhhhhccCCCCCccc--c------------cccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEE
Confidence 653110 00000000 000000000 0 0000111123699999999888876543 4899999
Q ss_pred EcCCCCCCCC
Q 017757 253 IFPPDTETPG 262 (366)
Q Consensus 253 V~PG~v~T~~ 262 (366)
+.||.|..+.
T Consensus 1174 ~Rpg~v~G~~ 1183 (1389)
T TIGR03443 1174 VRPGYVTGDS 1183 (1389)
T ss_pred ECCCccccCC
Confidence 9999997663
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.3e-08 Score=95.36 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=75.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---cCC-CcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---AGP-VDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---~~~-id~ 114 (366)
+++||||||.+|++++++|.++|++|.+..|++++.+ ...+..+.+|+.|++++.++++. +.. +|.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~ 70 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA 70 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence 3899999999999999999999999999999987532 12455678899999999998843 345 899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++++++... + ..+ ..+.+++.+++.+ ..+||++||...
T Consensus 71 v~~~~~~~~-------~--~~~------------~~~~~i~aa~~~g---v~~~V~~Ss~~~ 108 (285)
T TIGR03649 71 VYLVAPPIP-------D--LAP------------PMIKFIDFARSKG---VRRFVLLSASII 108 (285)
T ss_pred EEEeCCCCC-------C--hhH------------HHHHHHHHHHHcC---CCEEEEeecccc
Confidence 999986421 1 000 1123444555543 569999998543
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.6e-09 Score=93.83 Aligned_cols=225 Identities=14% Similarity=0.082 Sum_probs=146.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKE--GARVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+.|.++||||.|.||...+..+... .++.+..+.-. ..+ +..+++.. ..+..+++.|+.+...+.-++..- +
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~-~~l~~~~n--~p~ykfv~~di~~~~~~~~~~~~~-~ 80 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNL-KNLEPVRN--SPNYKFVEGDIADADLVLYLFETE-E 80 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccccccc-chhhhhcc--CCCceEeeccccchHHHHhhhccC-c
Confidence 3489999999999999999999986 45555544311 111 22222222 457889999999999988887755 7
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|.|+|.|...+... +.-+--..++.|++++..+++.++-.. +..++|++|+-..+..+..++.
T Consensus 81 id~vihfaa~t~vd~----s~~~~~~~~~nnil~t~~Lle~~~~sg------~i~~fvhvSTdeVYGds~~~~~------ 144 (331)
T KOG0747|consen 81 IDTVIHFAAQTHVDR----SFGDSFEFTKNNILSTHVLLEAVRVSG------NIRRFVHVSTDEVYGDSDEDAV------ 144 (331)
T ss_pred hhhhhhhHhhhhhhh----hcCchHHHhcCCchhhhhHHHHHHhcc------CeeEEEEecccceecCcccccc------
Confidence 999999999776533 222234468899999999998886543 1568999998766541111110
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh------
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE------ 265 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~------ 265 (366)
. .+....-+..+|++||+|.+++.+++...| |+.|..+.-+.|..|....
T Consensus 145 ---~------------------~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipk 200 (331)
T KOG0747|consen 145 ---V------------------GEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPK 200 (331)
T ss_pred ---c------------------cccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHH
Confidence 0 011122233479999999999999999986 7788777766666664322
Q ss_pred hhh---cCCcch--hhhhccCCCCCHHHHHHHHHhhhhCCCeEe
Q 017757 266 ENK---RRPRLT--SIIAASSGAMKADEVAKKALDGIKSGSFIV 304 (366)
Q Consensus 266 ~~~---~~~~~~--~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~ 304 (366)
+.. ...... ..-.-...++-.+++++++......|..++
T Consensus 201 Fi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~ge 244 (331)
T KOG0747|consen 201 FIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGELGE 244 (331)
T ss_pred HHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCccc
Confidence 111 000000 000001235678999998888888776443
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.1e-09 Score=96.28 Aligned_cols=98 Identities=14% Similarity=0.169 Sum_probs=73.3
Q ss_pred CEEEEEc-CCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 38 RHVFITG-GSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 38 k~vLITG-as~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
.+=.||. ++||||+++|++|+++|++|+++++... +... ....+|+++.+++++++++ ++++
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~-----~~~~~Dv~d~~s~~~l~~~v~~~~g~i 81 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE-----PHPNLSIREIETTKDLLITLKELVQEH 81 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc-----cCCcceeecHHHHHHHHHHHHHHcCCC
Confidence 3445665 4679999999999999999999876311 1100 0245899999998887654 5889
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHH
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 151 (366)
|++|||||+....++.+.+.++|++++ ..+.+++.+
T Consensus 82 DiLVnnAgv~d~~~~~~~s~e~~~~~~---~~~~~~~~~ 117 (227)
T TIGR02114 82 DILIHSMAVSDYTPVYMTDLEQVQASD---NLNEFLSKQ 117 (227)
T ss_pred CEEEECCEeccccchhhCCHHHHhhhc---chhhhhccc
Confidence 999999998777788889999999774 445565554
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.2e-08 Score=94.60 Aligned_cols=112 Identities=25% Similarity=0.324 Sum_probs=74.4
Q ss_pred CCCCEEEEE----cCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHH----HHHhhcCCeEEEEEecCCCHHHHHHHH
Q 017757 35 IKDRHVFIT----GGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQ----SIQLATGIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 35 l~gk~vLIT----Gas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~----~l~~~~~~~v~~~~~Dls~~~~v~~~~ 106 (366)
...+++||| ||+|.||.+++++|+++|++|++++|+......... .........+.++.+|++| +++++
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~ 126 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV 126 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence 345789999 999999999999999999999999998754322110 0111112247788889876 44555
Q ss_pred HhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc
Q 017757 107 DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (366)
Q Consensus 107 ~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~ 177 (366)
. ...+|+|||+++. +.+ +. +.+++.+++.+ ..++|++||...+
T Consensus 127 ~-~~~~d~Vi~~~~~---------~~~-----------~~----~~ll~aa~~~g---vkr~V~~SS~~vy 169 (378)
T PLN00016 127 A-GAGFDVVYDNNGK---------DLD-----------EV----EPVADWAKSPG---LKQFLFCSSAGVY 169 (378)
T ss_pred c-cCCccEEEeCCCC---------CHH-----------HH----HHHHHHHHHcC---CCEEEEEccHhhc
Confidence 2 2469999999762 111 22 23344444433 5699999997654
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.1e-07 Score=86.37 Aligned_cols=115 Identities=22% Similarity=0.291 Sum_probs=73.8
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
++||||||-||++++.+|.+.|++|+++.|++.+.+.... ..+. ..+.+.+..+ .++|+|||-|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-------~~v~-------~~~~~~~~~~--~~~DavINLA 64 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-------PNVT-------LWEGLADALT--LGIDAVINLA 64 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-------cccc-------ccchhhhccc--CCCCEEEECC
Confidence 5899999999999999999999999999999876553211 1111 1111222222 1699999999
Q ss_pred CCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 120 GVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 120 G~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
|..-.... .+.+.=+..++.-+ ..++.+.....+.+. +.++..-+|..|+.
T Consensus 65 G~~I~~rr--Wt~~~K~~i~~SRi----~~T~~L~e~I~~~~~--~P~~~isaSAvGyY 115 (297)
T COG1090 65 GEPIAERR--WTEKQKEEIRQSRI----NTTEKLVELIAASET--KPKVLISASAVGYY 115 (297)
T ss_pred CCcccccc--CCHHHHHHHHHHHh----HHHHHHHHHHHhccC--CCcEEEecceEEEe
Confidence 96544332 35555555555444 445555555554332 45666667777776
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=8.8e-08 Score=99.23 Aligned_cols=103 Identities=21% Similarity=0.239 Sum_probs=78.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++|||||+|.||++++++|.++|++|++++|+.... ....+.++.+|+++.. +.++++ .+|+|||+
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al~---~~D~VIHL 67 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELAG---EADAVIHL 67 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHhc---CCCEEEEc
Confidence 599999999999999999999999999999865321 0235778999999984 555554 68999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
|+.... . ..++|+.++.++++++. +. ..++|++||..
T Consensus 68 Aa~~~~------~------~~~vNv~Gt~nLleAA~----~~----GvRiV~~SS~~ 104 (699)
T PRK12320 68 APVDTS------A------PGGVGITGLAHVANAAA----RA----GARLLFVSQAA 104 (699)
T ss_pred CccCcc------c------hhhHHHHHHHHHHHHHH----Hc----CCeEEEEECCC
Confidence 986321 1 12479999999888874 22 23799999864
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.1e-07 Score=83.52 Aligned_cols=182 Identities=19% Similarity=0.130 Sum_probs=113.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
..+..+++++||||+|.||.+++.+|..+|+.|+++|--...-++..+.+-. ......+.-|+.. .++. .
T Consensus 22 ~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~--~~~fel~~hdv~~-----pl~~---e 91 (350)
T KOG1429|consen 22 VKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG--HPNFELIRHDVVE-----PLLK---E 91 (350)
T ss_pred ccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc--CcceeEEEeechh-----HHHH---H
Confidence 3456789999999999999999999999999999998755443333222211 2234444445444 3555 5
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|.++|.|..+++...-.-+ .+++..|.+++.+++..+.+. ..|++..|+..-+.-+ ....+.
T Consensus 92 vD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakrv--------~aR~l~aSTseVYgdp-~~hpq~---- 154 (350)
T KOG1429|consen 92 VDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKRV--------GARFLLASTSEVYGDP-LVHPQV---- 154 (350)
T ss_pred hhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHHh--------CceEEEeecccccCCc-ccCCCc----
Confidence 79999999887765433222 347889999999999888544 3488888886655411 111000
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+...- ...+....+ .|.-.|.+.+.|+....++ .||.|....+-.+..|
T Consensus 155 e~ywg-~vnpigpr~-----------------cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGP 203 (350)
T KOG1429|consen 155 ETYWG-NVNPIGPRS-----------------CYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGP 203 (350)
T ss_pred ccccc-ccCcCCchh-----------------hhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCC
Confidence 00000 000122223 7999999777777766665 4776655544444333
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-07 Score=93.00 Aligned_cols=81 Identities=25% Similarity=0.312 Sum_probs=64.6
Q ss_pred cCCCCCEEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecC
Q 017757 33 IPIKDRHVFITGG----------------SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96 (366)
Q Consensus 33 ~~l~gk~vLITGa----------------s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dl 96 (366)
.+++||++||||| +|++|+++|++|+++|++|++++++.+ ++ . ... ...+|+
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~----~~~--~~~~dv 251 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T----PAG--VKRIDV 251 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C----CCC--cEEEcc
Confidence 3589999999999 555999999999999999999998753 11 0 111 346899
Q ss_pred CCHHHHHHHHHh-cCCCcEEEEcCCCCCCC
Q 017757 97 RDFDAVKTALDE-AGPVDVLVVNQGVFVPG 125 (366)
Q Consensus 97 s~~~~v~~~~~~-~~~id~vi~nAG~~~~~ 125 (366)
++.+++.+.+++ ++++|++|||||+....
T Consensus 252 ~~~~~~~~~v~~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 252 ESAQEMLDAVLAALPQADIFIMAAAVADYR 281 (399)
T ss_pred CCHHHHHHHHHHhcCCCCEEEEcccccccc
Confidence 999998888765 68899999999986443
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.4e-07 Score=87.13 Aligned_cols=85 Identities=22% Similarity=0.345 Sum_probs=67.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCc---hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG---KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.++++|+++|+|| ||+|++++..|++.|++ |++++|+. ++++++.+++... ...+....+|+++.+++++.++
T Consensus 122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~-~~~~~~~~~d~~~~~~~~~~~~- 198 (289)
T PRK12548 122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE-VPECIVNVYDLNDTEKLKAEIA- 198 (289)
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc-CCCceeEEechhhhhHHHhhhc-
Confidence 3578999999999 69999999999999997 99999997 6677777766543 2345566789988888877666
Q ss_pred cCCCcEEEEcCCCC
Q 017757 109 AGPVDVLVVNQGVF 122 (366)
Q Consensus 109 ~~~id~vi~nAG~~ 122 (366)
..|++|||....
T Consensus 199 --~~DilINaTp~G 210 (289)
T PRK12548 199 --SSDILVNATLVG 210 (289)
T ss_pred --cCCEEEEeCCCC
Confidence 569999997543
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=9.1e-07 Score=86.92 Aligned_cols=128 Identities=17% Similarity=0.304 Sum_probs=91.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCchh--HHHHHH---------HHHhhc---CCeEEEEEecC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGKK--LEEAKQ---------SIQLAT---GIEVATYSADV 96 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~---~V~l~~r~~~~--~~~~~~---------~l~~~~---~~~v~~~~~Dl 96 (366)
.++||+++||||||.+|+.+.++|++.-- ++.+.-|.+.. .++..+ .+.+.. -.++..+..|+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 47899999999999999999999998642 57777775422 111111 111111 25788999999
Q ss_pred CCHH------HHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEE
Q 017757 97 RDFD------AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIAL 170 (366)
Q Consensus 97 s~~~------~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~ 170 (366)
++++ +.+.+.+ .+|++||+|+... -.|.++..+.+|..|+.++++.+.....- ..+++
T Consensus 89 ~~~~LGis~~D~~~l~~---eV~ivih~AAtvr-------Fde~l~~al~iNt~Gt~~~l~lak~~~~l------~~~vh 152 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLAD---EVNIVIHSAATVR-------FDEPLDVALGINTRGTRNVLQLAKEMVKL------KALVH 152 (467)
T ss_pred cCcccCCChHHHHHHHh---cCCEEEEeeeeec-------cchhhhhhhhhhhHhHHHHHHHHHHhhhh------heEEE
Confidence 9854 4554555 7999999998643 23456778999999999999988665443 47999
Q ss_pred ecCCccc
Q 017757 171 MSSQAGQ 177 (366)
Q Consensus 171 vsS~~~~ 177 (366)
+|.....
T Consensus 153 VSTAy~n 159 (467)
T KOG1221|consen 153 VSTAYSN 159 (467)
T ss_pred eehhhee
Confidence 9987765
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.1e-07 Score=79.81 Aligned_cols=85 Identities=24% Similarity=0.331 Sum_probs=70.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
..++++++++|+||+|++|+++++.|+++|++|++++|+.+++++..+++....+. ....+|..+.+++.+.++ .
T Consensus 23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~---~ 97 (194)
T cd01078 23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE--GVGAVETSDDAARAAAIK---G 97 (194)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC--cEEEeeCCCHHHHHHHHh---c
Confidence 35689999999999999999999999999999999999998888887777543333 345678899988888776 6
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
.|++|++...
T Consensus 98 ~diVi~at~~ 107 (194)
T cd01078 98 ADVVFAAGAA 107 (194)
T ss_pred CCEEEECCCC
Confidence 7999887653
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.7e-07 Score=96.68 Aligned_cols=163 Identities=19% Similarity=0.310 Sum_probs=132.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHH---HHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLE---EAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~---~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
..|.++|+||-||.|+++|..|.++|++ +++++|+.-+-- ..+...++ .|..+..-..|++..+..++++++
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~-~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR-RGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh-cCeEEEEecccchhhhhHHHHHHHhhh
Confidence 3688999999999999999999999997 889999865432 22233333 378888888999999999999876
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
.+.+..++|.|.+.....+++.++++|++.-+..+.++.++-+.-.++... -.-+|..||+..-+
T Consensus 1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~-----LdyFv~FSSvscGR---------- 1910 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE-----LDYFVVFSSVSCGR---------- 1910 (2376)
T ss_pred cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc-----cceEEEEEeecccC----------
Confidence 588999999999998899999999999999999999999998877666544 23677777766444
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV 243 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~ 243 (366)
+..+.. .|+-+.++++-+++.-+.+-
T Consensus 1911 ------------GN~GQt-----------------NYG~aNS~MERiceqRr~~G 1936 (2376)
T KOG1202|consen 1911 ------------GNAGQT-----------------NYGLANSAMERICEQRRHEG 1936 (2376)
T ss_pred ------------CCCccc-----------------ccchhhHHHHHHHHHhhhcC
Confidence 445555 89999999999999877763
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.2e-06 Score=69.63 Aligned_cols=199 Identities=18% Similarity=0.235 Sum_probs=125.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++.|+||||-.|..++++..++|++|+.+.||+.+.... ..+..++.|+.|.+++.+.+. +.|+||..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~---g~DaVIsA 69 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLA---GHDAVISA 69 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhc---CCceEEEe
Confidence 578999999999999999999999999999999876542 256678999999999877777 78999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
-|...+.. +. .+ ....+++...++... ..|++.++...+....... .+.
T Consensus 70 ~~~~~~~~------~~--~~--------~k~~~~li~~l~~ag---v~RllVVGGAGSL~id~g~---------rLv--- 118 (211)
T COG2910 70 FGAGASDN------DE--LH--------SKSIEALIEALKGAG---VPRLLVVGGAGSLEIDEGT---------RLV--- 118 (211)
T ss_pred ccCCCCCh------hH--HH--------HHHHHHHHHHHhhcC---CeeEEEEcCccceEEcCCc---------eee---
Confidence 88654321 11 11 111455666666544 5799999987766521110 000
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC-Ccchhhh
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR-PRLTSII 277 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~-~~~~~~~ 277 (366)
..|.++ ..|-..-.+..-+-+.|+.+ .++...-|+|..+-.|.-+...... .+..-..
T Consensus 119 --D~p~fP----------------~ey~~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n 177 (211)
T COG2910 119 --DTPDFP----------------AEYKPEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVN 177 (211)
T ss_pred --cCCCCc----------------hhHHHHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceEEEc
Confidence 111111 13433333333444555554 3578888999877666433211111 1111111
Q ss_pred hccCCCCCHHHHHHHHHhhhhCCC
Q 017757 278 AASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 278 ~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
..+...++.++.|-++++.+..+.
T Consensus 178 ~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 178 AKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred CCCceeeeHHHHHHHHHHHHhccc
Confidence 122346789999999999887764
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.9e-06 Score=75.47 Aligned_cols=76 Identities=22% Similarity=0.294 Sum_probs=60.5
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
|+|+||+|.+|+.+++.|.+.+++|.++.|+... +..++++.. + +..+.+|..|.+++.++++ ++|.||++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~-g--~~vv~~d~~~~~~l~~al~---g~d~v~~~~ 72 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL-G--AEVVEADYDDPESLVAALK---GVDAVFSVT 72 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT-T--TEEEES-TT-HHHHHHHHT---TCSEEEEES
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc-c--ceEeecccCCHHHHHHHHc---CCceEEeec
Confidence 6899999999999999999999999999998742 233344432 3 3556999999999999998 899999998
Q ss_pred CCCC
Q 017757 120 GVFV 123 (366)
Q Consensus 120 G~~~ 123 (366)
+...
T Consensus 73 ~~~~ 76 (233)
T PF05368_consen 73 PPSH 76 (233)
T ss_dssp SCSC
T ss_pred Ccch
Confidence 8654
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.44 E-value=7.6e-07 Score=86.77 Aligned_cols=82 Identities=33% Similarity=0.406 Sum_probs=64.1
Q ss_pred cCCCCCEEEEEcC---------------CCh-hHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecC
Q 017757 33 IPIKDRHVFITGG---------------SSG-IGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96 (366)
Q Consensus 33 ~~l~gk~vLITGa---------------s~g-IG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dl 96 (366)
.+++||+++|||| |+| +|.++|++|..+|++|++++++.... .+.. ...+|+
T Consensus 181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~~--~~~~~v 248 (390)
T TIGR00521 181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPPG--VKSIKV 248 (390)
T ss_pred cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCCC--cEEEEe
Confidence 3489999999999 566 99999999999999999988765421 0112 256899
Q ss_pred CCHHHH-HHHHHh-cCCCcEEEEcCCCCCCCC
Q 017757 97 RDFDAV-KTALDE-AGPVDVLVVNQGVFVPGE 126 (366)
Q Consensus 97 s~~~~v-~~~~~~-~~~id~vi~nAG~~~~~~ 126 (366)
++.+++ ++++++ ++.+|++|+|||+....+
T Consensus 249 ~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~ 280 (390)
T TIGR00521 249 STAEEMLEAALNELAKDFDIFISAAAVADFKP 280 (390)
T ss_pred ccHHHHHHHHHHhhcccCCEEEEccccccccc
Confidence 999998 667744 578999999999875543
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.3e-05 Score=79.79 Aligned_cols=194 Identities=18% Similarity=0.154 Sum_probs=127.6
Q ss_pred CCCCcCCCCCEEEEEcCC-ChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhh---cCCeEEEEEecCCCHHHHH
Q 017757 29 KPVRIPIKDRHVFITGGS-SGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLA---TGIEVATYSADVRDFDAVK 103 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas-~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~ 103 (366)
++......++++|||||+ +.||.+++.+|++.|++|+++..+-+ .-.+..+.+... ++.....+..++.+..+|+
T Consensus 388 ~p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVd 467 (866)
T COG4982 388 KPNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVD 467 (866)
T ss_pred CCCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHH
Confidence 456677889999999988 57999999999999999998865433 222333444332 3567888999999999999
Q ss_pred HHHHhc------------------CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 017757 104 TALDEA------------------GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGP 165 (366)
Q Consensus 104 ~~~~~~------------------~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~ 165 (366)
.+++.. -.+|.+|-.|.+...+.+.+..+.. +..+++-+.+...++-.+.+.-..++-..+
T Consensus 468 AlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R 546 (866)
T COG4982 468 ALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTR 546 (866)
T ss_pred HHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccc
Confidence 998752 1478899999887777666655432 444566666666665555444333222223
Q ss_pred cEEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc-
Q 017757 166 ASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI- 244 (366)
Q Consensus 166 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~- 244 (366)
-++|.-.|-+-- -+.+-. .|+-||+|+..++.-+-.|-+
T Consensus 547 ~hVVLPgSPNrG-----------------------~FGgDG-----------------aYgEsK~aldav~~RW~sEs~W 586 (866)
T COG4982 547 LHVVLPGSPNRG-----------------------MFGGDG-----------------AYGESKLALDAVVNRWHSESSW 586 (866)
T ss_pred eEEEecCCCCCC-----------------------ccCCCc-----------------chhhHHHHHHHHHHHhhccchh
Confidence 456665553311 233444 899999999988866655531
Q ss_pred cCCcEEEEEcCCCCCCCCh
Q 017757 245 ADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 245 ~~gI~Vn~V~PG~v~T~~~ 263 (366)
..-+.+..-.-|++....+
T Consensus 587 a~~vsl~~A~IGWtrGTGL 605 (866)
T COG4982 587 AARVSLAHALIGWTRGTGL 605 (866)
T ss_pred hHHHHHhhhheeeeccccc
Confidence 2224444455677765443
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.6e-06 Score=78.64 Aligned_cols=99 Identities=17% Similarity=0.117 Sum_probs=66.5
Q ss_pred CEEEEEcCCC-hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHH-HHHHHhcCCCcEE
Q 017757 38 RHVFITGGSS-GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAV-KTALDEAGPVDVL 115 (366)
Q Consensus 38 k~vLITGas~-gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v-~~~~~~~~~id~v 115 (366)
.+-.||+.++ +||+++|++|+++|++|++++|+..... .....+.++.++ +.++. +.+.+.++.+|++
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------~~~~~v~~i~v~--s~~~m~~~l~~~~~~~Div 85 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------EPHPNLSIIEIE--NVDDLLETLEPLVKDHDVL 85 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--------CCCCCeEEEEEe--cHHHHHHHHHHHhcCCCEE
Confidence 3567786555 5999999999999999999987642100 001244444433 33322 2233334579999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHH
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGS 146 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~ 146 (366)
|||||+....+....+.+++.+++++|....
T Consensus 86 Ih~AAvsd~~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 86 IHSMAVSDYTPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred EeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence 9999987655666678889999988876544
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.8e-06 Score=81.18 Aligned_cols=77 Identities=27% Similarity=0.474 Sum_probs=67.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+++||.|+ |++|+.+|..|+++| .+|++.+|+.++++++.+.. +.++.+.++|+.|.+++.++++++ |+||
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----~~~v~~~~vD~~d~~al~~li~~~---d~VI 73 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----GGKVEALQVDAADVDALVALIKDF---DLVI 73 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----cccceeEEecccChHHHHHHHhcC---CEEE
Confidence 57899998 999999999999999 89999999998888776554 348999999999999999999955 9999
Q ss_pred EcCCCC
Q 017757 117 VNQGVF 122 (366)
Q Consensus 117 ~nAG~~ 122 (366)
|++...
T Consensus 74 n~~p~~ 79 (389)
T COG1748 74 NAAPPF 79 (389)
T ss_pred EeCCch
Confidence 999754
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.7e-05 Score=71.85 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=66.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
..++||||||.+|++++++|.++|++|.+..|+++...... ..+.....|+.++.++...++ ..|.+++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~---G~~~~~~ 69 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAK---GVDGVLL 69 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhc---cccEEEE
Confidence 36899999999999999999999999999999998776653 468889999999999999988 7899888
Q ss_pred cCCCCC
Q 017757 118 NQGVFV 123 (366)
Q Consensus 118 nAG~~~ 123 (366)
..+...
T Consensus 70 i~~~~~ 75 (275)
T COG0702 70 ISGLLD 75 (275)
T ss_pred Eecccc
Confidence 888654
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.6e-05 Score=68.92 Aligned_cols=163 Identities=12% Similarity=0.107 Sum_probs=97.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~---~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++++|||++|-+|.||.+.+.++|. +.++.+. -.+|+++.++.++++++. ++.+
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~e-kPth 58 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------KDADLTNLADTRALFESE-KPTH 58 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------ccccccchHHHHHHHhcc-CCce
Confidence 6899999999999999999999875 2333222 136999999999999987 5777
Q ss_pred EEEcCCCCCCCCccC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 115 LVVNQGVFVPGELEV--QSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 115 vi~nAG~~~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|||.|+.... .+.. .+. +.+..|+.=.-++++.+..+-.+ ++++..|..-+. +.+..
T Consensus 59 VIhlAAmVGG-lf~N~~ynl----dF~r~Nl~indNVlhsa~e~gv~-------K~vsclStCIfP---------dkt~y 117 (315)
T KOG1431|consen 59 VIHLAAMVGG-LFHNNTYNL----DFIRKNLQINDNVLHSAHEHGVK-------KVVSCLSTCIFP---------DKTSY 117 (315)
T ss_pred eeehHhhhcc-hhhcCCCch----HHHhhcceechhHHHHHHHhchh-------hhhhhcceeecC---------CCCCC
Confidence 8888754221 1111 122 24555555555666666555332 455555533221 11111
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
++.+.. +..-.+-+....|+-+|.-+.-..+..++++ |-...++.|-.+..|
T Consensus 118 PIdEtm--------------vh~gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGp 169 (315)
T KOG1431|consen 118 PIDETM--------------VHNGPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGP 169 (315)
T ss_pred CCCHHH--------------hccCCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCC
Confidence 111110 0111122334489999987777778888876 445566667666555
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.2e-05 Score=71.71 Aligned_cols=126 Identities=17% Similarity=0.120 Sum_probs=92.8
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
-.+.+.+|-++-|.||||.+|+.++.+|++.|-+|++=.|-.+.-- .++.--+ -+++.++..|+.|+++++++++
T Consensus 54 GGRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmGdLGQvl~~~fd~~DedSIr~vvk- 129 (391)
T KOG2865|consen 54 GGRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMGDLGQVLFMKFDLRDEDSIRAVVK- 129 (391)
T ss_pred CCcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecccccceeeeccCCCCHHHHHHHHH-
Confidence 4455788899999999999999999999999999999998543211 1111111 2478999999999999999999
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
.-++|||.-|.-.+.. ..+ .-++|..++-.+.+.|...- .-++|.+|+..+
T Consensus 130 --~sNVVINLIGrd~eTk--nf~------f~Dvn~~~aerlAricke~G-------VerfIhvS~Lga 180 (391)
T KOG2865|consen 130 --HSNVVINLIGRDYETK--NFS------FEDVNVHIAERLARICKEAG-------VERFIHVSCLGA 180 (391)
T ss_pred --hCcEEEEeeccccccC--Ccc------cccccchHHHHHHHHHHhhC-------hhheeehhhccc
Confidence 5699999999644321 112 23577778877777774332 348999998764
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.3e-05 Score=65.17 Aligned_cols=79 Identities=23% Similarity=0.450 Sum_probs=61.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++++++|.|+ ||.|++++..|+++|++ |+++.|+.++++++.+++. +..+.....+ + +.+... ..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~---~~~~~~~~~~--~---~~~~~~---~~ 76 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG---GVNIEAIPLE--D---LEEALQ---EA 76 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT---GCSEEEEEGG--G---HCHHHH---TE
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC---ccccceeeHH--H---HHHHHh---hC
Confidence 789999999997 99999999999999987 9999999999998888772 3345444432 2 224444 68
Q ss_pred cEEEEcCCCCCC
Q 017757 113 DVLVVNQGVFVP 124 (366)
Q Consensus 113 d~vi~nAG~~~~ 124 (366)
|++|++.+...+
T Consensus 77 DivI~aT~~~~~ 88 (135)
T PF01488_consen 77 DIVINATPSGMP 88 (135)
T ss_dssp SEEEE-SSTTST
T ss_pred CeEEEecCCCCc
Confidence 999999886543
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.3e-05 Score=78.40 Aligned_cols=76 Identities=26% Similarity=0.444 Sum_probs=61.6
Q ss_pred EEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 40 VFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
|+|.|| |.+|+.+++.|++++. +|++.+|+.+++++..+++ .+.++...++|+.|.++++++++ ..|+|||
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~---~~dvVin 73 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPESLAELLR---GCDVVIN 73 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHHHHHHHHT---TSSEEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHHHHHHHHh---cCCEEEE
Confidence 689999 9999999999999974 7999999999988877665 35689999999999999999998 5699999
Q ss_pred cCCCC
Q 017757 118 NQGVF 122 (366)
Q Consensus 118 nAG~~ 122 (366)
++|..
T Consensus 74 ~~gp~ 78 (386)
T PF03435_consen 74 CAGPF 78 (386)
T ss_dssp -SSGG
T ss_pred CCccc
Confidence 99864
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=7.2e-05 Score=72.62 Aligned_cols=133 Identities=19% Similarity=0.228 Sum_probs=85.3
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHH-HHHHHHHh
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFD-AVKTALDE 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~-~v~~~~~~ 108 (366)
+...+.+-.+|+|+||+|++|+-+++.|.++|..|.++.|+.++.++... +. .......-+..|..... ....+++.
T Consensus 72 ~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~-~~d~~~~~v~~~~~~~~d~~~~~~~~ 149 (411)
T KOG1203|consen 72 PNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VF-FVDLGLQNVEADVVTAIDILKKLVEA 149 (411)
T ss_pred CCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cc-ccccccceeeeccccccchhhhhhhh
Confidence 34455678899999999999999999999999999999999888777654 11 11122333444444433 34455554
Q ss_pred cC-CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 109 AG-PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 109 ~~-~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
.. ...+++.++|...... +..+ -.++-+.|..++++++...- ..|++++||+.+.-
T Consensus 150 ~~~~~~~v~~~~ggrp~~e-d~~~------p~~VD~~g~knlvdA~~~aG-------vk~~vlv~si~~~~ 206 (411)
T KOG1203|consen 150 VPKGVVIVIKGAGGRPEEE-DIVT------PEKVDYEGTKNLVDACKKAG-------VKRVVLVGSIGGTK 206 (411)
T ss_pred ccccceeEEecccCCCCcc-cCCC------cceecHHHHHHHHHHHHHhC-------CceEEEEEeecCcc
Confidence 32 3567777777543321 1112 22355557777777773322 45999999987643
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.1e-05 Score=73.23 Aligned_cols=83 Identities=22% Similarity=0.303 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCC----------------ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC
Q 017757 35 IKDRHVFITGGS----------------SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD 98 (366)
Q Consensus 35 l~gk~vLITGas----------------~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~ 98 (366)
|+||++|||+|. |.+|.++|++|.++|++|+++++....... ... .+.....+..|...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~--~~~~~~~V~s~~d~ 75 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN--NQLELHPFEGIIDL 75 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC--CceeEEEEecHHHH
Confidence 579999999886 999999999999999999988764321110 000 02234445553333
Q ss_pred HHHHHHHHHhcCCCcEEEEcCCCCC
Q 017757 99 FDAVKTALDEAGPVDVLVVNQGVFV 123 (366)
Q Consensus 99 ~~~v~~~~~~~~~id~vi~nAG~~~ 123 (366)
.+.+++++++. .+|++||+|+..-
T Consensus 76 ~~~l~~~~~~~-~~D~VIH~AAvsD 99 (229)
T PRK09620 76 QDKMKSIITHE-KVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHhccc-CCCEEEECccccc
Confidence 45666665433 5899999999853
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.5e-05 Score=78.04 Aligned_cols=78 Identities=27% Similarity=0.375 Sum_probs=59.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++|+++|+|+++ +|.++|+.|+++|++|++++++. +..++..+++... .+..+..|..+ +..+.+
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~---~~~~~~~~~~~--------~~~~~~ 69 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL---GIELVLGEYPE--------EFLEGV 69 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCEEEeCCcch--------hHhhcC
Confidence 67899999999877 99999999999999999999975 3444444444322 35567777776 123478
Q ss_pred cEEEEcCCCCC
Q 017757 113 DVLVVNQGVFV 123 (366)
Q Consensus 113 d~vi~nAG~~~ 123 (366)
|+||+++|...
T Consensus 70 d~vv~~~g~~~ 80 (450)
T PRK14106 70 DLVVVSPGVPL 80 (450)
T ss_pred CEEEECCCCCC
Confidence 99999999743
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.95 E-value=2e-05 Score=70.41 Aligned_cols=184 Identities=12% Similarity=0.030 Sum_probs=116.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH-HHHHHh----hcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA-KQSIQL----ATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~-~~~l~~----~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.|++||||-+|-=|..+|+-|+.+|++|..+-|..+..... ++.+-. -.+......-.|++|...+.++++.. .
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-k 106 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-K 106 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-C
Confidence 45899999999999999999999999999777765544433 333321 12456677889999999999999987 4
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
++-+.|.|+..+..--.++ .+-+-++...|++.++.++...-... .-++---|+..-+. ..
T Consensus 107 PtEiYnLaAQSHVkvSFdl----peYTAeVdavGtLRlLdAi~~c~l~~----~VrfYQAstSElyG-----------kv 167 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDL----PEYTAEVDAVGTLRLLDAIRACRLTE----KVRFYQASTSELYG-----------KV 167 (376)
T ss_pred chhhhhhhhhcceEEEeec----ccceeeccchhhhhHHHHHHhcCccc----ceeEEecccHhhcc-----------cc
Confidence 7778888887665422222 23345577889998888876543332 12333333322111 00
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHh---ccCCcEEEEEcCCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV---IADDIHVSLIFPPD 257 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~---~~~gI~Vn~V~PG~ 257 (366)
..++.. +..|+.+-.+|+++|..--=++-..+..| +-.||-+|.=+|--
T Consensus 168 ~e~PQs-----------------E~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRR 219 (376)
T KOG1372|consen 168 QEIPQS-----------------ETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRR 219 (376)
T ss_pred cCCCcc-----------------cCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCcc
Confidence 111111 12233334489999986544444444443 46789999888843
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.92 E-value=6.8e-05 Score=71.41 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=73.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
..+++.|||++|.+|..++..|+.++. +++++|+++.. ....++..... . ....|+++.+++.+.++ ..|
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~--g~a~Dl~~~~~-~--~~i~~~~~~~d~~~~l~---~aD 88 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP--GVAADVSHINT-P--AQVRGFLGDDQLGDALK---GAD 88 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC--eeEchhhhCCc-C--ceEEEEeCCCCHHHHcC---CCC
Confidence 457899999999999999999997764 79999998721 11112221111 1 12234444444444444 799
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
+||+.||..... .+.+.+.+..|+.....+.+.+ ++.. +..+++++|
T Consensus 89 iVVitAG~~~~~------g~~R~dll~~N~~i~~~i~~~i----~~~~---p~aivivvS 135 (323)
T PLN00106 89 LVIIPAGVPRKP------GMTRDDLFNINAGIVKTLCEAV----AKHC---PNALVNIIS 135 (323)
T ss_pred EEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHH----HHHC---CCeEEEEeC
Confidence 999999975431 1235667888887755555554 4443 345666655
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=5.5e-05 Score=72.22 Aligned_cols=75 Identities=21% Similarity=0.336 Sum_probs=56.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHC-C-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKE-G-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~-G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
.++++|+++||||+|.||+.+|++|+++ | .++++++|+.++++...+++.. .|+. ++.+.+ .
T Consensus 151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~----------~~i~---~l~~~l---~ 214 (340)
T PRK14982 151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG----------GKIL---SLEEAL---P 214 (340)
T ss_pred cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc----------ccHH---hHHHHH---c
Confidence 4789999999999999999999999865 5 5899999998877776654421 1222 233333 4
Q ss_pred CCcEEEEcCCCCC
Q 017757 111 PVDVLVVNQGVFV 123 (366)
Q Consensus 111 ~id~vi~nAG~~~ 123 (366)
..|++|++++...
T Consensus 215 ~aDiVv~~ts~~~ 227 (340)
T PRK14982 215 EADIVVWVASMPK 227 (340)
T ss_pred cCCEEEECCcCCc
Confidence 7899999998754
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.6e-05 Score=70.59 Aligned_cols=80 Identities=26% Similarity=0.337 Sum_probs=71.5
Q ss_pred EEEEEcCCChhHHHHHHHHHH----CCCeEEEEecCchhHHHHHHHHHhhcC----CeEEEEEecCCCHHHHHHHHHhcC
Q 017757 39 HVFITGGSSGIGLALAHQAAK----EGARVSILARSGKKLEEAKQSIQLATG----IEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~----~G~~V~l~~r~~~~~~~~~~~l~~~~~----~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
-++|-||||.-|..+++++.+ .|.++.+.+||++++++..+.+.+..+ ..+ .+.||.+|++++.++++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak--- 82 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK--- 82 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh---
Confidence 478999999999999999999 788999999999999999999887653 344 88899999999999999
Q ss_pred CCcEEEEcCCCC
Q 017757 111 PVDVLVVNQGVF 122 (366)
Q Consensus 111 ~id~vi~nAG~~ 122 (366)
+..+++||+|.+
T Consensus 83 ~~~vivN~vGPy 94 (423)
T KOG2733|consen 83 QARVIVNCVGPY 94 (423)
T ss_pred hhEEEEeccccc
Confidence 568999999975
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00013 Score=69.40 Aligned_cols=119 Identities=17% Similarity=0.163 Sum_probs=76.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++.+++.|||++|.+|..++..|+.++ .+++++|++. .+....++..... .....+.+|+.++.+.++ ..
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~---~~~v~~~td~~~~~~~l~---ga 77 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT---PAKVTGYADGELWEKALR---GA 77 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc---CceEEEecCCCchHHHhC---CC
Confidence 456699999999999999999999665 5799999932 2222223332111 223345666555444444 78
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
|+||++||..... .+.+.+.+..|+...-.+.+.+ ++.. +.++++++|-
T Consensus 78 DvVVitaG~~~~~------~~tR~dll~~N~~i~~~i~~~i----~~~~---~~~iviv~SN 126 (321)
T PTZ00325 78 DLVLICAGVPRKP------GMTRDDLFNTNAPIVRDLVAAV----ASSA---PKAIVGIVSN 126 (321)
T ss_pred CEEEECCCCCCCC------CCCHHHHHHHHHHHHHHHHHHH----HHHC---CCeEEEEecC
Confidence 9999999975321 1234567788877666555555 4443 4578887774
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00013 Score=64.98 Aligned_cols=172 Identities=18% Similarity=0.156 Sum_probs=105.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHC-CC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKE-GA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~-G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.-+...+||||+-|-+|..+|+.|..+ |- .|++.+..+....-. . .--++-.|+-|..++++++-.. +
T Consensus 41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~--------~-~GPyIy~DILD~K~L~eIVVn~-R 110 (366)
T KOG2774|consen 41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT--------D-VGPYIYLDILDQKSLEEIVVNK-R 110 (366)
T ss_pred cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc--------c-cCCchhhhhhccccHHHhhccc-c
Confidence 445678999999999999999999876 54 477766544321110 0 1125667999999999887544 7
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|.+||-.+..+.- .....--..++|+.|..++++.+..+ .--+|+-|.-|..++-.+.+
T Consensus 111 IdWL~HfSALLSAv-----GE~NVpLA~~VNI~GvHNil~vAa~~---------kL~iFVPSTIGAFGPtSPRN------ 170 (366)
T KOG2774|consen 111 IDWLVHFSALLSAV-----GETNVPLALQVNIRGVHNILQVAAKH---------KLKVFVPSTIGAFGPTSPRN------ 170 (366)
T ss_pred cceeeeHHHHHHHh-----cccCCceeeeecchhhhHHHHHHHHc---------CeeEeecccccccCCCCCCC------
Confidence 99999987643221 11112234789999999998887543 23345555444442221111
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEE-cCCCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLI-FPPDT 258 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V-~PG~v 258 (366)
+.|... -..+-..|+.||--.+-+.+.+...+ |+.+.|+ .||.+
T Consensus 171 ---------PTPdlt-----------IQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~i 215 (366)
T KOG2774|consen 171 ---------PTPDLT-----------IQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGII 215 (366)
T ss_pred ---------CCCCee-----------eecCceeechhHHHHHHHHHHHHhhc---CccceecccCccc
Confidence 222111 01122279999998777777776654 5655554 35554
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00033 Score=66.96 Aligned_cols=117 Identities=16% Similarity=0.159 Sum_probs=68.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC-------CeEEEEecCchh--HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG-------ARVSILARSGKK--LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G-------~~V~l~~r~~~~--~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
+++||||+|.+|.+++..|+..+ .+|+++++++.. ++....++... ......|++...++.+.+
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~----~~~~~~~~~~~~~~~~~l--- 76 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC----AFPLLKSVVATTDPEEAF--- 76 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc----cccccCCceecCCHHHHh---
Confidence 58999999999999999999854 589999996532 22111111100 001112333333333333
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
...|+|||+||..... ..+. .+.++.|+. +++.+.+.+.+... ..+.++.+|.
T Consensus 77 ~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~----i~~~i~~~i~~~~~-~~~iiivvsN 129 (325)
T cd01336 77 KDVDVAILVGAMPRKE---GMER---KDLLKANVK----IFKEQGEALDKYAK-KNVKVLVVGN 129 (325)
T ss_pred CCCCEEEEeCCcCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCC-CCeEEEEecC
Confidence 4799999999975432 1232 445566654 45555555555421 1456777765
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0004 Score=58.67 Aligned_cols=77 Identities=21% Similarity=0.295 Sum_probs=57.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++++++|+|+ |++|.++++.|.+.| .+|++++|+.++.++..+++... ....+.++.++. ....
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~------~~~~~~~~~~~~------~~~~ 82 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL------GIAIAYLDLEEL------LAEA 82 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc------ccceeecchhhc------cccC
Confidence 467899999997 899999999999996 78999999988877776665421 022334443322 3478
Q ss_pred cEEEEcCCCCC
Q 017757 113 DVLVVNQGVFV 123 (366)
Q Consensus 113 d~vi~nAG~~~ 123 (366)
|++|++.....
T Consensus 83 Dvvi~~~~~~~ 93 (155)
T cd01065 83 DLIINTTPVGM 93 (155)
T ss_pred CEEEeCcCCCC
Confidence 99999997654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0013 Score=61.70 Aligned_cols=77 Identities=27% Similarity=0.317 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
+|++++|+|+++++|.++++.+...|.+|++++++.++.+.+. ++ +.+ ..+|..+.+..+.+.+.. +.+|
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~---~~~~~~~~~~~~~~~~~~~~~~~d 215 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA----GAD---AVFNYRAEDLADRILAATAGQGVD 215 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc----CCC---EEEeCCCcCHHHHHHHHcCCCceE
Confidence 5899999999999999999999999999999999877655442 22 222 124555555555544332 4699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++++++|
T Consensus 216 ~vi~~~~ 222 (325)
T cd08253 216 VIIEVLA 222 (325)
T ss_pred EEEECCc
Confidence 9999987
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0043 Score=60.46 Aligned_cols=77 Identities=22% Similarity=0.258 Sum_probs=57.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
+.++.++|.|+ |.+|+.+++.+...|++|++++|+.++++.+.+.+ +.. +..+..+.+.+.+.+. ..|+
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g~~---v~~~~~~~~~l~~~l~---~aDv 233 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----GGR---IHTRYSNAYEIEDAVK---RADL 233 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----Cce---eEeccCCHHHHHHHHc---cCCE
Confidence 56788999987 79999999999999999999999987766544332 222 2345566676666665 6899
Q ss_pred EEEcCCCC
Q 017757 115 LVVNQGVF 122 (366)
Q Consensus 115 vi~nAG~~ 122 (366)
+|++++..
T Consensus 234 VI~a~~~~ 241 (370)
T TIGR00518 234 LIGAVLIP 241 (370)
T ss_pred EEEccccC
Confidence 99998653
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00033 Score=65.53 Aligned_cols=78 Identities=18% Similarity=0.326 Sum_probs=57.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+++.... .+.+ ++ +.. +....
T Consensus 119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~--~~~~---~~----~~~---~~~~~ 185 (278)
T PRK00258 119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG--KAEL---DL----ELQ---EELAD 185 (278)
T ss_pred CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--ceee---cc----cch---hcccc
Confidence 3688999999997 999999999999999 789999999998888877665321 1111 11 111 22246
Q ss_pred CcEEEEcCCCCC
Q 017757 112 VDVLVVNQGVFV 123 (366)
Q Consensus 112 id~vi~nAG~~~ 123 (366)
.|++||+.....
T Consensus 186 ~DivInaTp~g~ 197 (278)
T PRK00258 186 FDLIINATSAGM 197 (278)
T ss_pred CCEEEECCcCCC
Confidence 899999976543
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0011 Score=61.61 Aligned_cols=77 Identities=26% Similarity=0.297 Sum_probs=57.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
..++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++... + .+.....| + ......|
T Consensus 114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~-~-~~~~~~~~-----~-----~~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY-G-EIQAFSMD-----E-----LPLHRVD 180 (270)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc-C-ceEEechh-----h-----hcccCcc
Confidence 357899999998 69999999999999999999999998888887776532 2 12222211 1 0123689
Q ss_pred EEEEcCCCCC
Q 017757 114 VLVVNQGVFV 123 (366)
Q Consensus 114 ~vi~nAG~~~ 123 (366)
++||+.+...
T Consensus 181 ivInatp~gm 190 (270)
T TIGR00507 181 LIINATSAGM 190 (270)
T ss_pred EEEECCCCCC
Confidence 9999998654
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0032 Score=59.56 Aligned_cols=77 Identities=35% Similarity=0.442 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.+++++|+|+++++|.++++.+...|++|++++++.++.+.+ ..+ +.. ...|..+.+..+.+.+.. +.+|
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~d 237 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL----GAD---YVIDYRKEDFVREVRELTGKRGVD 237 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CCC---eEEecCChHHHHHHHHHhCCCCCc
Confidence 578999999999999999999999999999999987765543 221 222 224666666666655543 4699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++++++|
T Consensus 238 ~~i~~~g 244 (342)
T cd08266 238 VVVEHVG 244 (342)
T ss_pred EEEECCc
Confidence 9999998
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0004 Score=69.31 Aligned_cols=82 Identities=23% Similarity=0.268 Sum_probs=55.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
|+++||+++|||+++ +|+++|+.|+++|++|++.+++........+++... +.++ ...+ +...+ .+ ..+
T Consensus 1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~-g~~~--~~~~--~~~~~---~~--~~~ 69 (447)
T PRK02472 1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE-GIKV--ICGS--HPLEL---LD--EDF 69 (447)
T ss_pred CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc-CCEE--EeCC--CCHHH---hc--CcC
Confidence 457899999999975 999999999999999999998765444444444432 3222 2211 11111 11 148
Q ss_pred cEEEEcCCCCCCC
Q 017757 113 DVLVVNQGVFVPG 125 (366)
Q Consensus 113 d~vi~nAG~~~~~ 125 (366)
|.||+++|+....
T Consensus 70 d~vV~s~gi~~~~ 82 (447)
T PRK02472 70 DLMVKNPGIPYTN 82 (447)
T ss_pred CEEEECCCCCCCC
Confidence 9999999986543
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0034 Score=58.96 Aligned_cols=73 Identities=21% Similarity=0.336 Sum_probs=52.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
...++|++++|+|. |++|+++|+.|...|++|++.+|+.++.+...+ .+.. . ...+++.+.++ .
T Consensus 146 ~~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-----~g~~--~-----~~~~~l~~~l~---~ 209 (287)
T TIGR02853 146 DFTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE-----MGLI--P-----FPLNKLEEKVA---E 209 (287)
T ss_pred CCCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----CCCe--e-----ecHHHHHHHhc---c
Confidence 35889999999997 779999999999999999999999875443321 1211 1 12333444444 6
Q ss_pred CcEEEEcCC
Q 017757 112 VDVLVVNQG 120 (366)
Q Consensus 112 id~vi~nAG 120 (366)
.|++|++..
T Consensus 210 aDiVint~P 218 (287)
T TIGR02853 210 IDIVINTIP 218 (287)
T ss_pred CCEEEECCC
Confidence 899999873
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0047 Score=52.92 Aligned_cols=81 Identities=17% Similarity=0.176 Sum_probs=60.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
++.++++.++|.||+|-.|..+.+++++.+- +|+++.|.+....++ +..+.....|.++.++. +...
T Consensus 13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at--------~k~v~q~~vDf~Kl~~~---a~~~ 81 (238)
T KOG4039|consen 13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT--------DKVVAQVEVDFSKLSQL---ATNE 81 (238)
T ss_pred HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc--------cceeeeEEechHHHHHH---Hhhh
Confidence 4778999999999999999999999999974 699998875322221 34555666676665544 4444
Q ss_pred CCCcEEEEcCCCCC
Q 017757 110 GPVDVLVVNQGVFV 123 (366)
Q Consensus 110 ~~id~vi~nAG~~~ 123 (366)
..+|+.+++-|...
T Consensus 82 qg~dV~FcaLgTTR 95 (238)
T KOG4039|consen 82 QGPDVLFCALGTTR 95 (238)
T ss_pred cCCceEEEeecccc
Confidence 48999999988643
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0012 Score=57.70 Aligned_cols=77 Identities=29% Similarity=0.424 Sum_probs=48.7
Q ss_pred CCCCEEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC
Q 017757 35 IKDRHVFITGG----------------SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD 98 (366)
Q Consensus 35 l~gk~vLITGa----------------s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~ 98 (366)
|+||++|||+| ||-.|.++|+++..+|++|+++..... +.. +..+. ..++.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p~~~~--~i~v~s 68 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------PPGVK--VIRVES 68 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEE--EEE-SS
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------cccce--EEEecc
Confidence 57999999976 458999999999999999999888742 211 22343 345667
Q ss_pred HHHHHHHHHh-cCCCcEEEEcCCCCC
Q 017757 99 FDAVKTALDE-AGPVDVLVVNQGVFV 123 (366)
Q Consensus 99 ~~~v~~~~~~-~~~id~vi~nAG~~~ 123 (366)
.+++.+.+.+ +...|++|++|++.-
T Consensus 69 a~em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 69 AEEMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp HHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred hhhhhhhhccccCcceeEEEecchhh
Confidence 7776555544 456699999999864
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0032 Score=60.16 Aligned_cols=109 Identities=17% Similarity=0.191 Sum_probs=67.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHH-------HH
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA-------RVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFD-------AV 102 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~-------~v 102 (366)
++.||||+|.+|..++..|+.+|. +++++|+++ +.+ .....|++|.. .+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~---------------~g~~~Dl~d~~~~~~~~~~i 66 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL---------------EGVVMELQDCAFPLLKGVVI 66 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc---------------ceeeeehhhhcccccCCcEE
Confidence 579999999999999999998653 599999986 432 23344444431 00
Q ss_pred -HHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 103 -KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 103 -~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
....+.+...|+||+.||..... ..+ -.+.++.|. -+++.+.+.+.+... ..+.++.+|-
T Consensus 67 ~~~~~~~~~~aDiVVitAG~~~~~---g~t---R~dll~~N~----~i~~~i~~~i~~~~~-~~~iiivvsN 127 (323)
T cd00704 67 TTDPEEAFKDVDVAILVGAFPRKP---GME---RADLLRKNA----KIFKEQGEALNKVAK-PTVKVLVVGN 127 (323)
T ss_pred ecChHHHhCCCCEEEEeCCCCCCc---CCc---HHHHHHHhH----HHHHHHHHHHHHhCC-CCeEEEEeCC
Confidence 11223345799999999975331 122 334555554 456666666666521 1456666653
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0049 Score=58.95 Aligned_cols=78 Identities=23% Similarity=0.345 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|.+++|+||+|++|..++..+...|++|+.+.++.++.+.+.+.+ +.+. ..|-.+.++..+.+.+. +++|
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l----Ga~~---vi~~~~~~~~~~~i~~~~~~gvd 223 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL----GFDD---AFNYKEEPDLDAALKRYFPNGID 223 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCce---eEEcCCcccHHHHHHHhCCCCcE
Confidence 5899999999999999999888888999999998877765554323 2221 12322222232222221 4799
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++.+.|
T Consensus 224 ~v~d~~g 230 (338)
T cd08295 224 IYFDNVG 230 (338)
T ss_pred EEEECCC
Confidence 9999887
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0011 Score=62.17 Aligned_cols=123 Identities=21% Similarity=0.266 Sum_probs=83.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
...++|-||+|.-|.-+|++|+++|.+..+.+||..++..+.+.+ +.+...+.+++ ++.++++++ +.++|+
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L----G~~~~~~p~~~--p~~~~~~~~---~~~VVl 76 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL----GPEAAVFPLGV--PAALEAMAS---RTQVVL 76 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc----CccccccCCCC--HHHHHHHHh---cceEEE
Confidence 356889999999999999999999999999999999998887776 44444555554 888888888 789999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMID-----VNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~-----vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
||+|.+..-. .--...+.. ..+.|-+.+++.....-.++......+||.-..
T Consensus 77 ncvGPyt~~g-----~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cG 133 (382)
T COG3268 77 NCVGPYTRYG-----EPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCG 133 (382)
T ss_pred eccccccccc-----cHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCC
Confidence 9999765311 000111111 123455566666555533332222457776543
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0017 Score=60.97 Aligned_cols=76 Identities=18% Similarity=0.210 Sum_probs=56.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.++.++++...... ...... +++.+. ....
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~-~~~~~~-----~~~~~~---~~~a 193 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPA-ARATAG-----SDLAAA---LAAA 193 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCC-eEEEec-----cchHhh---hCCC
Confidence 467899999996 8899999999999998 6999999999999888887654322 222111 112222 2368
Q ss_pred cEEEEcC
Q 017757 113 DVLVVNQ 119 (366)
Q Consensus 113 d~vi~nA 119 (366)
|+|||+.
T Consensus 194 DiVInaT 200 (284)
T PRK12549 194 DGLVHAT 200 (284)
T ss_pred CEEEECC
Confidence 9999994
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0041 Score=59.77 Aligned_cols=85 Identities=22% Similarity=0.395 Sum_probs=65.2
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc---------------------hhHHHHHHHHHhhc-CC
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG---------------------KKLEEAKQSIQLAT-GI 87 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~---------------------~~~~~~~~~l~~~~-~~ 87 (366)
....+++++|+|.|+ ||+|..+|+.|+..|. +++++|++. .+.+.+++.+.+.. ..
T Consensus 18 ~Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v 96 (338)
T PRK12475 18 GQRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEV 96 (338)
T ss_pred HHHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCc
Confidence 345789999999996 8899999999999997 799999874 34555566666553 45
Q ss_pred eEEEEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 88 EVATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 88 ~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
++..+..|++ .+.++++++ ..|++|.+..
T Consensus 97 ~i~~~~~~~~-~~~~~~~~~---~~DlVid~~D 125 (338)
T PRK12475 97 EIVPVVTDVT-VEELEELVK---EVDLIIDATD 125 (338)
T ss_pred EEEEEeccCC-HHHHHHHhc---CCCEEEEcCC
Confidence 7778888886 445666665 6799998874
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0068 Score=57.50 Aligned_cols=113 Identities=19% Similarity=0.268 Sum_probs=73.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+++.|.|+ |++|.++|..|+.+| .+|++++++.++.+....++.... +....... .+.++ ....
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-------l~~a 69 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-------CKDA 69 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-------hCCC
Confidence 36788996 899999999999999 589999999998887777775432 22222221 22221 2478
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
|++|+++|..... ..+. .+.++.|. -+++...+.+++... .+.++++|.
T Consensus 70 DIVIitag~~~~~---g~~R---~dll~~N~----~i~~~~~~~i~~~~~--~~~vivvsN 118 (306)
T cd05291 70 DIVVITAGAPQKP---GETR---LDLLEKNA----KIMKSIVPKIKASGF--DGIFLVASN 118 (306)
T ss_pred CEEEEccCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHhCC--CeEEEEecC
Confidence 9999999975331 1232 23444444 455566666666442 467777775
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0022 Score=63.24 Aligned_cols=77 Identities=13% Similarity=0.238 Sum_probs=57.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++|+++|.|+ ||+|+.+++.|+++|. +++++.|+.++.+++.+++.. .. ....+++.+.+. ..
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~---~~-------~~~~~~l~~~l~---~a 243 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN---AS-------AHYLSELPQLIK---KA 243 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC---Ce-------EecHHHHHHHhc---cC
Confidence 478999999997 9999999999999996 699999998887777665531 11 112234444444 68
Q ss_pred cEEEEcCCCCCC
Q 017757 113 DVLVVNQGVFVP 124 (366)
Q Consensus 113 d~vi~nAG~~~~ 124 (366)
|+||++.+...+
T Consensus 244 DiVI~aT~a~~~ 255 (414)
T PRK13940 244 DIIIAAVNVLEY 255 (414)
T ss_pred CEEEECcCCCCe
Confidence 999999986544
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0059 Score=58.89 Aligned_cols=78 Identities=24% Similarity=0.347 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|.+++|+|++|++|..++..+...|++|+.++++.++.+.+.+++ +.+.. .|-.+.+++.+.+.+. +++|
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l----Ga~~v---i~~~~~~~~~~~i~~~~~~gvD 230 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFDEA---FNYKEEPDLDAALKRYFPEGID 230 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc----CCCEE---EECCCcccHHHHHHHHCCCCcE
Confidence 5899999999999999999888888999999988877765543333 32211 2322222233333221 3699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++.+.|
T Consensus 231 ~v~d~vG 237 (348)
T PLN03154 231 IYFDNVG 237 (348)
T ss_pred EEEECCC
Confidence 9999987
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0026 Score=59.60 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=56.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++++++... ..+.. +...+++.. .....
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~--~~~~~----~~~~~~~~~---~~~~~ 191 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV--GVITR----LEGDSGGLA---IEKAA 191 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc--Cccee----ccchhhhhh---cccCC
Confidence 468999999986 9999999999999997 6999999999888887766432 11111 111122222 22468
Q ss_pred cEEEEcCCCC
Q 017757 113 DVLVVNQGVF 122 (366)
Q Consensus 113 d~vi~nAG~~ 122 (366)
|+|||+....
T Consensus 192 DiVInaTp~g 201 (282)
T TIGR01809 192 EVLVSTVPAD 201 (282)
T ss_pred CEEEECCCCC
Confidence 9999998754
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0072 Score=57.83 Aligned_cols=75 Identities=20% Similarity=0.302 Sum_probs=51.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC---HHHHHHHHHhcCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD---FDAVKTALDEAGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~---~~~v~~~~~~~~~i 112 (366)
|.+++|+||+|++|.+++......|+ +|+.+++++++.+.+.+++ +.+.. .|..+ .+.+.++.. +++
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l----Ga~~v---i~~~~~~~~~~i~~~~~--~gv 225 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL----GFDAA---INYKTDNVAERLRELCP--EGV 225 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc----CCcEE---EECCCCCHHHHHHHHCC--CCc
Confidence 48999999999999999888888898 7999988877665554433 32221 12222 222333221 469
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|+++.+.|
T Consensus 226 d~vid~~g 233 (345)
T cd08293 226 DVYFDNVG 233 (345)
T ss_pred eEEEECCC
Confidence 99999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0037 Score=59.71 Aligned_cols=111 Identities=16% Similarity=0.145 Sum_probs=69.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHH-HHH-------
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA-------RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFD-AVK------- 103 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~-~v~------- 103 (366)
++.|+|++|.+|..++..|+.+|. +++++|++++.. .......|++|.. ...
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------------~a~g~~~Dl~d~~~~~~~~~~~~~ 67 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------------VLEGVVMELMDCAFPLLDGVVPTH 67 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------------ccceeEeehhcccchhcCceeccC
Confidence 478999999999999999998654 599999975431 1223445555544 110
Q ss_pred HHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 104 TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 104 ~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
...+.+...|++|+.||..... .++..+.++.|+. +++.+.+.+.+... ..+.++.+|.
T Consensus 68 ~~~~~~~~aDiVVitAG~~~~~------~~tr~~ll~~N~~----i~k~i~~~i~~~~~-~~~iiivvsN 126 (324)
T TIGR01758 68 DPAVAFTDVDVAILVGAFPRKE------GMERRDLLSKNVK----IFKEQGRALDKLAK-KDCKVLVVGN 126 (324)
T ss_pred ChHHHhCCCCEEEEcCCCCCCC------CCcHHHHHHHHHH----HHHHHHHHHHhhCC-CCeEEEEeCC
Confidence 1123345799999999975331 1234556666654 55566666666420 1467777664
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.011 Score=55.98 Aligned_cols=75 Identities=28% Similarity=0.412 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.+.+++|+||++++|+++++.+...|.+|+.+.++.++.+.+ +. . +... .+ |..+ +.+.+.+...+|++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~-~~~~-~~--~~~~---~~~~~~~~~~~d~v 230 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KE---L-GADY-VI--DGSK---FSEDVKKLGGADVV 230 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HH---c-CCcE-EE--ecHH---HHHHHHhccCCCEE
Confidence 578999999999999999999999999999999887654443 21 1 2211 11 2111 44444445579999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
++++|.
T Consensus 231 ~~~~g~ 236 (332)
T cd08259 231 IELVGS 236 (332)
T ss_pred EECCCh
Confidence 999973
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0059 Score=57.20 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=57.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++|+++|.|+ ||-+++++..|++.|+ +|+++.|+.++.+++.+.+....+.... ...| ..++.+... ..
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~---~~~~~~~~~---~~ 195 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVD---ARGIEDVIA---AA 195 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecC---HhHHHHHHh---hc
Confidence 466899999996 8899999999999997 5999999999998888877543332221 1122 222222222 57
Q ss_pred cEEEEcCCCC
Q 017757 113 DVLVVNQGVF 122 (366)
Q Consensus 113 d~vi~nAG~~ 122 (366)
|++||+....
T Consensus 196 divINaTp~G 205 (283)
T PRK14027 196 DGVVNATPMG 205 (283)
T ss_pred CEEEEcCCCC
Confidence 9999997543
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.032 Score=53.37 Aligned_cols=100 Identities=24% Similarity=0.313 Sum_probs=65.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---CCCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA---GPVD 113 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~---~~id 113 (366)
|.++||+||+||+|...+.-....|+.++++..++++.+ ...++. ...+ .|..+.+ +.+-+.+. ..+|
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lG---Ad~v----i~y~~~~-~~~~v~~~t~g~gvD 213 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELG---ADHV----INYREED-FVEQVRELTGGKGVD 213 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcC---CCEE----EcCCccc-HHHHHHHHcCCCCce
Confidence 999999999999999999888888988777766666555 333332 2222 2333333 44444332 2699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
+++...|.. . ....+..+++ .|+++.+....+
T Consensus 214 vv~D~vG~~-------------------------~-~~~~l~~l~~-----~G~lv~ig~~~g 245 (326)
T COG0604 214 VVLDTVGGD-------------------------T-FAASLAALAP-----GGRLVSIGALSG 245 (326)
T ss_pred EEEECCCHH-------------------------H-HHHHHHHhcc-----CCEEEEEecCCC
Confidence 999999831 0 1123444554 689999998774
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0048 Score=58.66 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=63.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHH---CCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 38 RHVFITGGSSGIGLALAHQAAK---EGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~---~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++++|+||+|++|.+++..|.. .+..+++.+|++.. +...-++... +.......++- +++. +.....|+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~-~~~~~i~~~~~---~d~~---~~l~~~Di 72 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHI-PTAVKIKGFSG---EDPT---PALEGADV 72 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcC-CCCceEEEeCC---CCHH---HHcCCCCE
Confidence 4689999999999999998855 24578899987542 1111122211 10111111111 1222 22246999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
||.++|...... .+ -...+..|....- .+.+.|.+.. +.+++.+.|
T Consensus 73 VIitaG~~~~~~---~~---R~dll~~N~~i~~----~ii~~i~~~~---~~~ivivvs 118 (312)
T PRK05086 73 VLISAGVARKPG---MD---RSDLFNVNAGIVK----NLVEKVAKTC---PKACIGIIT 118 (312)
T ss_pred EEEcCCCCCCCC---CC---HHHHHHHHHHHHH----HHHHHHHHhC---CCeEEEEcc
Confidence 999999864421 12 2345666665544 4445555543 345555555
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.032 Score=51.76 Aligned_cols=86 Identities=17% Similarity=0.221 Sum_probs=56.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCch-------------------hHHHHHHHHHhhc-CCeE
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGK-------------------KLEEAKQSIQLAT-GIEV 89 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~-------------------~~~~~~~~l~~~~-~~~v 89 (366)
....|++.+|+|.|+ ||+|.++|+.|++.| .+++++|.+.- +.+.+.+.+.+.. ..++
T Consensus 24 ~~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V 102 (268)
T PRK15116 24 ALQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV 102 (268)
T ss_pred HHHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEE
Confidence 345789999999985 899999999999999 57888887621 2223344444332 2344
Q ss_pred EEEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 90 ATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 90 ~~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
..+. +.-+++.+.+++. ..+|+||.+..
T Consensus 103 ~~i~-~~i~~e~~~~ll~--~~~D~VIdaiD 130 (268)
T PRK15116 103 TVVD-DFITPDNVAEYMS--AGFSYVIDAID 130 (268)
T ss_pred EEEe-cccChhhHHHHhc--CCCCEEEEcCC
Confidence 4443 3334555655553 25788888876
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0045 Score=57.77 Aligned_cols=81 Identities=23% Similarity=0.404 Sum_probs=58.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.+.+|+.++|.|| ||-+++++..|++.|. +|+++.|+.++.+++++.+..... .+. ..+..+.+..+ .
T Consensus 122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~~~--~~~~~~~~~~~-------~ 190 (283)
T COG0169 122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-AVE--AAALADLEGLE-------E 190 (283)
T ss_pred cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-ccc--ccccccccccc-------c
Confidence 5668999999996 8889999999999995 699999999999999888875422 111 11222222111 4
Q ss_pred CcEEEEcCCCCCC
Q 017757 112 VDVLVVNQGVFVP 124 (366)
Q Consensus 112 id~vi~nAG~~~~ 124 (366)
.|++||+......
T Consensus 191 ~dliINaTp~Gm~ 203 (283)
T COG0169 191 ADLLINATPVGMA 203 (283)
T ss_pred cCEEEECCCCCCC
Confidence 7999999765433
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.015 Score=55.31 Aligned_cols=77 Identities=21% Similarity=0.335 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|.+++|+||+|++|..++..+...|++|+.+.++.++.+.+ .++ +.+.. .|-.+.+...+.++.. +++|
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l----Ga~~v---i~~~~~~~~~~~~~~~~~~gvd 209 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL----GFDVA---FNYKTVKSLEETLKKASPDGYD 209 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CCCEE---EeccccccHHHHHHHhCCCCeE
Confidence 589999999999999999888888899999999887765544 222 32221 2223322333333332 3689
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++.+.|
T Consensus 210 vv~d~~G 216 (325)
T TIGR02825 210 CYFDNVG 216 (325)
T ss_pred EEEECCC
Confidence 9999887
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.014 Score=50.73 Aligned_cols=122 Identities=24% Similarity=0.191 Sum_probs=72.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCe--EEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIE--VATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~--v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+++++|-.|++.|. ++..+++++.+|+.++++++.++.+.+.+....-.+ +.++.+|+.+. +.+ ..+|
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~--~~~d 92 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----FRG--DKFD 92 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----ccc--cCce
Confidence 57789988877665 555666668999999999888777766665432222 77888887552 112 2689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITG---SFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~---~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
.++.|.......+.... .+.+...+.....+ .-.+++.+.+.|++ .|.++++.+
T Consensus 93 ~vi~n~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~-----gG~~~~~~~ 149 (188)
T PRK14968 93 VILFNPPYLPTEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKP-----GGRILLLQS 149 (188)
T ss_pred EEEECCCcCCCCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCC-----CeEEEEEEc
Confidence 99999876543321111 11122222222112 22346666677765 456665543
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.002 Score=65.65 Aligned_cols=49 Identities=31% Similarity=0.480 Sum_probs=42.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI 81 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l 81 (366)
..++++|+++|+|+ ||+|++++..|+++|++|++++|+.++.+++.+++
T Consensus 374 ~~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 374 GSPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred ccCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 34688999999998 69999999999999999999999988877776654
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.03 Score=52.86 Aligned_cols=71 Identities=23% Similarity=0.431 Sum_probs=50.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
..+.+++++|.|. |++|+.+++.|.+.|++|++++|+.++.+... ++ +.+. . ..+++.+.+ ...
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~----G~~~--~-----~~~~l~~~l---~~a 211 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EM----GLSP--F-----HLSELAEEV---GKI 211 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc----CCee--e-----cHHHHHHHh---CCC
Confidence 4678999999996 78999999999999999999999976543321 11 3221 1 123344444 378
Q ss_pred cEEEEcC
Q 017757 113 DVLVVNQ 119 (366)
Q Consensus 113 d~vi~nA 119 (366)
|++|+++
T Consensus 212 DiVI~t~ 218 (296)
T PRK08306 212 DIIFNTI 218 (296)
T ss_pred CEEEECC
Confidence 9999986
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.012 Score=52.20 Aligned_cols=84 Identities=23% Similarity=0.358 Sum_probs=61.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC-------------------chhHHHHHHHHHhhc-CCeEE
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS-------------------GKKLEEAKQSIQLAT-GIEVA 90 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~-~~~v~ 90 (366)
..++++++++|.| .||+|.++++.|+..|. +++++|.+ ..+.+.+++.+++.. ..++.
T Consensus 16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~ 94 (202)
T TIGR02356 16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVT 94 (202)
T ss_pred HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEE
Confidence 4578999999999 58999999999999997 79999987 344555566665543 34555
Q ss_pred EEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 91 TYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 91 ~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
.+..++.+ +.+.++++ ..|++|.+..
T Consensus 95 ~~~~~i~~-~~~~~~~~---~~D~Vi~~~d 120 (202)
T TIGR02356 95 ALKERVTA-ENLELLIN---NVDLVLDCTD 120 (202)
T ss_pred EehhcCCH-HHHHHHHh---CCCEEEECCC
Confidence 55555543 45555555 6899998874
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.018 Score=52.50 Aligned_cols=103 Identities=27% Similarity=0.388 Sum_probs=66.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH-HhcCCCc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL-DEAGPVD 113 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~-~~~~~id 113 (366)
.+|++++|+|+++ +|+++++.+...|.+|+++++++++.+.+ +++ +... ..|..+.+..+.+. ...+.+|
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~---~~~~~~~~~~~~~~~~~~~~~d 203 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL----GADH---VIDYKEEDLEEELRLTGGGGAD 203 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh----CCce---eccCCcCCHHHHHHHhcCCCCC
Confidence 3688999999988 99999999999999999999987665443 222 2111 12333332222222 2235799
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++++++|.. ...+...+.+++ .|+++.++....
T Consensus 204 ~vi~~~~~~-------------------------~~~~~~~~~l~~-----~G~~v~~~~~~~ 236 (271)
T cd05188 204 VVIDAVGGP-------------------------ETLAQALRLLRP-----GGRIVVVGGTSG 236 (271)
T ss_pred EEEECCCCH-------------------------HHHHHHHHhccc-----CCEEEEEccCCC
Confidence 999998732 123344555554 579998887554
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0068 Score=56.94 Aligned_cols=83 Identities=24% Similarity=0.336 Sum_probs=54.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc---hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG---KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.++++|+++|.|+ ||-+++++..|+..|. +|+++.|+. ++.+++++++....+..+... ++.+.+.+. +.
T Consensus 120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~--~~~~~~~l~---~~ 193 (288)
T PRK12749 120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT--DLADQQAFA---EA 193 (288)
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe--chhhhhhhh---hh
Confidence 4578999999997 6669999999999997 699999995 466666666543322222221 221111222 23
Q ss_pred cCCCcEEEEcCCC
Q 017757 109 AGPVDVLVVNQGV 121 (366)
Q Consensus 109 ~~~id~vi~nAG~ 121 (366)
....|+|||+...
T Consensus 194 ~~~aDivINaTp~ 206 (288)
T PRK12749 194 LASADILTNGTKV 206 (288)
T ss_pred cccCCEEEECCCC
Confidence 3478999998654
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0066 Score=54.95 Aligned_cols=74 Identities=24% Similarity=0.452 Sum_probs=59.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH-HHhcCCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTA-LDEAGPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~-~~~~~~id~vi 116 (366)
+.++|.|+ |-+|..+|+.|.++|++|+++++++++.++..++ ......+.+|-++++.++++ ++ ..|++|
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~-----~~~~~~v~gd~t~~~~L~~agi~---~aD~vv 71 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD-----ELDTHVVIGDATDEDVLEEAGID---DADAVV 71 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh-----hcceEEEEecCCCHHHHHhcCCC---cCCEEE
Confidence 35677775 7889999999999999999999999887764331 12567899999999988887 44 578888
Q ss_pred EcCC
Q 017757 117 VNQG 120 (366)
Q Consensus 117 ~nAG 120 (366)
-..|
T Consensus 72 a~t~ 75 (225)
T COG0569 72 AATG 75 (225)
T ss_pred EeeC
Confidence 7776
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.019 Score=58.08 Aligned_cols=109 Identities=18% Similarity=0.215 Sum_probs=73.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC--------------H
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD--------------F 99 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~--------------~ 99 (366)
...+.+++|+|+ |.+|+..+..+...|++|+++++++++++.+.+ + |.+. +..|..+ .
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l----GA~~--v~i~~~e~~~~~~gya~~~s~~ 233 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M----GAEF--LELDFEEEGGSGDGYAKVMSEE 233 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CCeE--EEeccccccccccchhhhcchh
Confidence 356899999995 899999999999999999999999988765433 3 3332 2222221 1
Q ss_pred --HHHHHHHHh-cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 100 --DAVKTALDE-AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 100 --~~v~~~~~~-~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
+...+.+.+ .+..|++|.++|..... ++..+++..+..|++ .++|+.++..
T Consensus 234 ~~~~~~~~~~~~~~gaDVVIetag~pg~~-------------------aP~lit~~~v~~mkp-----GgvIVdvg~~ 287 (509)
T PRK09424 234 FIKAEMALFAEQAKEVDIIITTALIPGKP-------------------APKLITAEMVASMKP-----GSVIVDLAAE 287 (509)
T ss_pred HHHHHHHHHHhccCCCCEEEECCCCCccc-------------------CcchHHHHHHHhcCC-----CCEEEEEccC
Confidence 112233333 35799999999975422 133345667777776 6789988874
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.036 Score=52.84 Aligned_cols=116 Identities=15% Similarity=0.220 Sum_probs=75.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcC--CeEEEEEecCCCHHHHHHHHHhcC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
=+++++.|+|+ |.+|.++|..|+.+|. +++++|++.+.++....+++.... .++.... .+ . +.+.
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~---~----~~~~ 72 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD---Y----SDCK 72 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC---H----HHhC
Confidence 35679999998 9999999999999987 799999999888877777765321 1222221 12 1 2234
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
..|++|..||..... ..+. .+.++.|. .+++.+.+.+.+... .+.++.+|-
T Consensus 73 ~adivIitag~~~k~---g~~R---~dll~~N~----~i~~~i~~~i~~~~~--~~~vivvsN 123 (315)
T PRK00066 73 DADLVVITAGAPQKP---GETR---LDLVEKNL----KIFKSIVGEVMASGF--DGIFLVASN 123 (315)
T ss_pred CCCEEEEecCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHhCC--CeEEEEccC
Confidence 789999999975321 1233 33455554 344555555555432 467777764
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.015 Score=56.03 Aligned_cols=84 Identities=23% Similarity=0.410 Sum_probs=61.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc---------------------hhHHHHHHHHHhhc-CCe
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG---------------------KKLEEAKQSIQLAT-GIE 88 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~---------------------~~~~~~~~~l~~~~-~~~ 88 (366)
..+|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+. .+.+.+.+.+.+.. ..+
T Consensus 19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~ 97 (339)
T PRK07688 19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVR 97 (339)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcE
Confidence 45788999999997 8999999999999998 799999873 33444455555442 346
Q ss_pred EEEEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 89 VATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 89 v~~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
+..+..|++. +.+.++++ ..|++|.+..
T Consensus 98 v~~~~~~~~~-~~~~~~~~---~~DlVid~~D 125 (339)
T PRK07688 98 VEAIVQDVTA-EELEELVT---GVDLIIDATD 125 (339)
T ss_pred EEEEeccCCH-HHHHHHHc---CCCEEEEcCC
Confidence 6777777753 45556655 5799988854
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.022 Score=53.88 Aligned_cols=77 Identities=19% Similarity=0.293 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~ 114 (366)
+|.+++|+||+|++|.++++.+...|++|+.+.+++++.+.+.+ + +.+.. .|-.+++..+++.+.. +++|+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~----Ga~~v---i~~~~~~~~~~v~~~~~~gvd~ 214 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L----GFDAV---FNYKTVSLEEALKEAAPDGIDC 214 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c----CCCEE---EeCCCccHHHHHHHHCCCCcEE
Confidence 58999999999999999988888899999999988776554432 2 32211 2333322222222111 46899
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
++.+.|
T Consensus 215 vld~~g 220 (329)
T cd08294 215 YFDNVG 220 (329)
T ss_pred EEECCC
Confidence 999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0051 Score=61.99 Aligned_cols=73 Identities=25% Similarity=0.384 Sum_probs=53.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++. ... .+. +++. .....
T Consensus 328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~----~~~----~~~---~~~~----~l~~~ 391 (477)
T PRK09310 328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ----GKA----FPL---ESLP----ELHRI 391 (477)
T ss_pred CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----cce----ech---hHhc----ccCCC
Confidence 4678999999996 799999999999999999999999887776655432 111 111 1111 13468
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|++|+|...
T Consensus 392 DiVInatP~ 400 (477)
T PRK09310 392 DIIINCLPP 400 (477)
T ss_pred CEEEEcCCC
Confidence 999999854
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.069 Score=48.47 Aligned_cols=84 Identities=21% Similarity=0.267 Sum_probs=56.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEEE
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVAT 91 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~~ 91 (366)
..+++.+++|.|. ||+|.++++.|++.|. +++++|.+. .+.+.+.+.+.+.. ..++..
T Consensus 7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~ 85 (231)
T cd00755 7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA 85 (231)
T ss_pred HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 3578899999995 8999999999999997 688887653 23344444554443 245555
Q ss_pred EEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 92 YSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 92 ~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
+...++ ++...+++. ..+|+||.+..
T Consensus 86 ~~~~i~-~~~~~~l~~--~~~D~VvdaiD 111 (231)
T cd00755 86 VEEFLT-PDNSEDLLG--GDPDFVVDAID 111 (231)
T ss_pred eeeecC-HhHHHHHhc--CCCCEEEEcCC
Confidence 555544 344555553 25898888864
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.018 Score=54.57 Aligned_cols=78 Identities=22% Similarity=0.299 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~ 114 (366)
++.+++|.|+++++|.+++..+.+.|++|+.+.++.++.+.+.+.+ +... ..|..+.+..+.+.+.. +.+|+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~----g~~~---~~~~~~~~~~~~v~~~~~~~~d~ 217 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL----GFDA---AINYKTPDLAEALKEAAPDGIDV 217 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc----CCce---EEecCChhHHHHHHHhccCCceE
Confidence 5789999999999999999999999999999998877655443322 2211 11223333222222221 57999
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
++.+.|
T Consensus 218 vi~~~g 223 (329)
T cd05288 218 YFDNVG 223 (329)
T ss_pred EEEcch
Confidence 999987
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0079 Score=51.82 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=35.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
.+++||+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 579999999999866679999999999999999999874
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.042 Score=45.90 Aligned_cols=113 Identities=21% Similarity=0.280 Sum_probs=72.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++.|+|++|.+|.++|..|..++ .++++++++++.++....++.... .........| . +.+...|
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~---~-------~~~~~aD 71 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD---Y-------EALKDAD 71 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS---G-------GGGTTES
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc---c-------ccccccc
Confidence 57899999999999999999996 469999999887777666665431 2223332222 1 2234689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
++|..||..... ..+ -.+.++.|.. +.+.+.+.+.+... .+.++.+|.
T Consensus 72 ivvitag~~~~~---g~s---R~~ll~~N~~----i~~~~~~~i~~~~p--~~~vivvtN 119 (141)
T PF00056_consen 72 IVVITAGVPRKP---GMS---RLDLLEANAK----IVKEIAKKIAKYAP--DAIVIVVTN 119 (141)
T ss_dssp EEEETTSTSSST---TSS---HHHHHHHHHH----HHHHHHHHHHHHST--TSEEEE-SS
T ss_pred EEEEeccccccc---ccc---HHHHHHHhHh----HHHHHHHHHHHhCC--ccEEEEeCC
Confidence 999999975321 123 2334555544 45555555555442 456666655
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0055 Score=54.43 Aligned_cols=72 Identities=17% Similarity=0.231 Sum_probs=53.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
..+++||+++|+|. |.+|+.+|+.|.+.|++|++.+++.+++++..+.+ +. .. +|. +++... .
T Consensus 23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~----g~--~~--v~~------~~l~~~--~ 85 (200)
T cd01075 23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELF----GA--TV--VAP------EEIYSV--D 85 (200)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc----CC--EE--Ecc------hhhccc--c
Confidence 56899999999997 48999999999999999999999987766665533 21 11 121 222221 5
Q ss_pred CcEEEEcCC
Q 017757 112 VDVLVVNQG 120 (366)
Q Consensus 112 id~vi~nAG 120 (366)
.|+++.+|.
T Consensus 86 ~Dv~vp~A~ 94 (200)
T cd01075 86 ADVFAPCAL 94 (200)
T ss_pred CCEEEeccc
Confidence 899998875
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0068 Score=55.88 Aligned_cols=74 Identities=16% Similarity=0.209 Sum_probs=57.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++|+|||+- |+.++++|.++|++|+...++....+...+ .....+..+..|.+++.+++.+. ++|+||+.
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-------~g~~~v~~g~l~~~~l~~~l~~~-~i~~VIDA 72 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-------HQALTVHTGALDPQELREFLKRH-SIDILVDA 72 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-------cCCceEEECCCCHHHHHHHHHhc-CCCEEEEc
Confidence 6899999998 999999999999999999988764333221 11234556778888888888765 69999998
Q ss_pred CCC
Q 017757 119 QGV 121 (366)
Q Consensus 119 AG~ 121 (366)
+..
T Consensus 73 tHP 75 (256)
T TIGR00715 73 THP 75 (256)
T ss_pred CCH
Confidence 864
|
This enzyme was found to be a monomer by gel filtration. |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.017 Score=56.57 Aligned_cols=76 Identities=24% Similarity=0.445 Sum_probs=58.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+++++++||.|| |-+|.-+|++|+++| .+|+++.|+.++.+++++++. .+....+++...+. ..
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----------~~~~~l~el~~~l~---~~ 239 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----------AEAVALEELLEALA---EA 239 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----------CeeecHHHHHHhhh---hC
Confidence 489999999996 789999999999999 569999999999998887764 12233333444444 67
Q ss_pred cEEEEcCCCCCC
Q 017757 113 DVLVVNQGVFVP 124 (366)
Q Consensus 113 d~vi~nAG~~~~ 124 (366)
|+||.+.|...+
T Consensus 240 DvVissTsa~~~ 251 (414)
T COG0373 240 DVVISSTSAPHP 251 (414)
T ss_pred CEEEEecCCCcc
Confidence 999988876544
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.017 Score=55.20 Aligned_cols=157 Identities=11% Similarity=0.060 Sum_probs=91.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCchh--HHHHHHHHHhhc-C--CeEEEEEecCCCHHHHHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGA-------RVSILARSGKK--LEEAKQSIQLAT-G--IEVATYSADVRDFDAVKT 104 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~~~--~~~~~~~l~~~~-~--~~v~~~~~Dls~~~~v~~ 104 (366)
-+++.|+|++|.+|..+|..|+.+|. +++++|.+++. ++..+.++.... . .++. ++. +
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~---- 71 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----ITD-D---- 71 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Eec-C----
Confidence 35789999999999999999998875 79999995433 443333333211 0 1111 110 1
Q ss_pred HHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 105 ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 105 ~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
-.+.+...|++|.+||..... ..+. .+.++.|. -+++.+.+.+.+... ..+.++.+|.-.-....
T Consensus 72 ~~~~~~daDivvitaG~~~k~---g~tR---~dll~~N~----~i~~~i~~~i~~~~~-~~~iiivvsNPvD~~t~---- 136 (322)
T cd01338 72 PNVAFKDADWALLVGAKPRGP---GMER---ADLLKANG----KIFTAQGKALNDVAS-RDVKVLVVGNPCNTNAL---- 136 (322)
T ss_pred cHHHhCCCCEEEEeCCCCCCC---CCcH---HHHHHHHH----HHHHHHHHHHHhhCC-CCeEEEEecCcHHHHHH----
Confidence 122334689999999975321 1232 33455554 456666666666441 14567766642211100
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI 244 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~ 244 (366)
......++.|... .|++++.--..|...+++.+.
T Consensus 137 ---------~~~k~sg~~p~~~-----------------ViG~t~LDs~Rl~~~la~~lg 170 (322)
T cd01338 137 ---------IAMKNAPDIPPDN-----------------FTAMTRLDHNRAKSQLAKKAG 170 (322)
T ss_pred ---------HHHHHcCCCChHh-----------------eEEehHHHHHHHHHHHHHHhC
Confidence 0000001244444 799999888899999999875
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.038 Score=52.71 Aligned_cols=97 Identities=24% Similarity=0.390 Sum_probs=68.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|++++|+|++ |+|...++.....|++|++++|++++++.+.+ + +.+.. .|-+|++..+.+.+. .|++
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l----GAd~~---i~~~~~~~~~~~~~~---~d~i 233 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L----GADHV---INSSDSDALEAVKEI---ADAI 233 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h----CCcEE---EEcCCchhhHHhHhh---CcEE
Confidence 49999999998 99998887777799999999999988766543 2 32322 233455555555553 8999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+.+++ .. .+...++.++. .|+++.++-..
T Consensus 234 i~tv~-~~-------------------------~~~~~l~~l~~-----~G~~v~vG~~~ 262 (339)
T COG1064 234 IDTVG-PA-------------------------TLEPSLKALRR-----GGTLVLVGLPG 262 (339)
T ss_pred EECCC-hh-------------------------hHHHHHHHHhc-----CCEEEEECCCC
Confidence 99997 21 11234556665 68999998753
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.011 Score=55.11 Aligned_cols=77 Identities=32% Similarity=0.439 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
++++++|+|+++++|+++++.+...|++|++++++.++.+.+ +++ +.+ ...|..+.+..+++.+.. +++|
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g~~---~~~~~~~~~~~~~~~~~~~~~~~d 210 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL----GAD---VAINYRTEDFAEEVKEATGGRGVD 210 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----CCC---EEEeCCchhHHHHHHHHhCCCCeE
Confidence 578999999999999999999999999999999987765544 222 222 123444444334333322 4699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
.+++++|
T Consensus 211 ~vi~~~g 217 (323)
T cd05276 211 VILDMVG 217 (323)
T ss_pred EEEECCc
Confidence 9999998
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.039 Score=45.50 Aligned_cols=80 Identities=23% Similarity=0.450 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEEEEEe
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVATYSA 94 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~~~~~ 94 (366)
++++++|.|+ |++|.++++.|+..|. +++++|.+. .+.+.+++.+++.. ..++..+..
T Consensus 1 r~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~ 79 (135)
T PF00899_consen 1 RNKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE 79 (135)
T ss_dssp HT-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec
Confidence 3578999995 8999999999999998 588887642 34555666666554 467888888
Q ss_pred cCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 95 DVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 95 Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
++ +.+...++++ ..|++|.+..
T Consensus 80 ~~-~~~~~~~~~~---~~d~vi~~~d 101 (135)
T PF00899_consen 80 KI-DEENIEELLK---DYDIVIDCVD 101 (135)
T ss_dssp HC-SHHHHHHHHH---TSSEEEEESS
T ss_pred cc-cccccccccc---CCCEEEEecC
Confidence 88 5566777776 6799999865
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.019 Score=56.11 Aligned_cols=83 Identities=24% Similarity=0.367 Sum_probs=62.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC-------------------chhHHHHHHHHHhhcC-CeEEE
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS-------------------GKKLEEAKQSIQLATG-IEVAT 91 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~-~~v~~ 91 (366)
..+++++|+|.|+ ||+|.++++.|+..|. ++++++++ ..+.+.+.+.+.+..+ .++..
T Consensus 131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~ 209 (376)
T PRK08762 131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEA 209 (376)
T ss_pred HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEE
Confidence 4678999999975 8999999999999998 69999987 4566666777765533 45666
Q ss_pred EEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 92 YSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 92 ~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
+...+++ +.+.++++ ..|+||++..
T Consensus 210 ~~~~~~~-~~~~~~~~---~~D~Vv~~~d 234 (376)
T PRK08762 210 VQERVTS-DNVEALLQ---DVDVVVDGAD 234 (376)
T ss_pred EeccCCh-HHHHHHHh---CCCEEEECCC
Confidence 6555543 45566665 6799999885
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.013 Score=58.28 Aligned_cols=75 Identities=20% Similarity=0.382 Sum_probs=55.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.++.++++. .. ..+.+++.+.+. ..
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g----~~-------~~~~~~~~~~l~---~a 243 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG----GE-------AIPLDELPEALA---EA 243 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC----Cc-------EeeHHHHHHHhc---cC
Confidence 478999999986 9999999999999997 79999999888776665542 11 122234444443 68
Q ss_pred cEEEEcCCCCC
Q 017757 113 DVLVVNQGVFV 123 (366)
Q Consensus 113 d~vi~nAG~~~ 123 (366)
|++|.+.|...
T Consensus 244 DvVI~aT~s~~ 254 (423)
T PRK00045 244 DIVISSTGAPH 254 (423)
T ss_pred CEEEECCCCCC
Confidence 99999987543
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.025 Score=51.28 Aligned_cols=84 Identities=17% Similarity=0.352 Sum_probs=61.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC-------------------chhHHHHHHHHHhhcC-CeEE
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS-------------------GKKLEEAKQSIQLATG-IEVA 90 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~-~~v~ 90 (366)
..++++++++|.| .||+|.++|+.|+..|. +++++|.+ ..+.+.+++.+++..+ .++.
T Consensus 16 q~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~ 94 (228)
T cd00757 16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIE 94 (228)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEE
Confidence 4468899999999 58999999999999997 57777543 2345556666665543 4677
Q ss_pred EEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 91 TYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 91 ~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
.+..+++ .+.+.++++ ..|++|.+..
T Consensus 95 ~~~~~i~-~~~~~~~~~---~~DvVi~~~d 120 (228)
T cd00757 95 AYNERLD-AENAEELIA---GYDLVLDCTD 120 (228)
T ss_pred EecceeC-HHHHHHHHh---CCCEEEEcCC
Confidence 7776664 455666665 6899999875
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.015 Score=57.66 Aligned_cols=75 Identities=17% Similarity=0.383 Sum_probs=55.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++++++|.|+ |.+|+.+++.|.+.| .+|++++|+.++.++..+++. .. .+ +.+++.+.+. ..
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g----~~--~i-----~~~~l~~~l~---~a 241 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG----GE--AV-----KFEDLEEYLA---EA 241 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC----Ce--Ee-----eHHHHHHHHh---hC
Confidence 478999999996 999999999999999 689999999887766655442 21 11 1234445554 68
Q ss_pred cEEEEcCCCCC
Q 017757 113 DVLVVNQGVFV 123 (366)
Q Consensus 113 d~vi~nAG~~~ 123 (366)
|++|.+.+...
T Consensus 242 DvVi~aT~s~~ 252 (417)
T TIGR01035 242 DIVISSTGAPH 252 (417)
T ss_pred CEEEECCCCCC
Confidence 99999987543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.019 Score=54.52 Aligned_cols=117 Identities=21% Similarity=0.207 Sum_probs=68.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCe--EEEEecCc--hhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGAR--VSILARSG--KKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~--V~l~~r~~--~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
.++.|+|++|.+|..++..|+..|.. |++++|++ ++++....++... .+... ....++. .+ .+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d--~~----~l~ 71 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSD--LS----DVA 71 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCC--HH----HhC
Confidence 36899999999999999999999864 99999965 4444433333321 11111 1111111 12 234
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
..|++|.++|..... ..+. .+.++.|+.-.. .+.+.+.+... .+.++.+++..
T Consensus 72 ~aDiViitag~p~~~---~~~r---~dl~~~n~~i~~----~~~~~i~~~~~--~~~viv~~npv 124 (309)
T cd05294 72 GSDIVIITAGVPRKE---GMSR---LDLAKKNAKIVK----KYAKQIAEFAP--DTKILVVTNPV 124 (309)
T ss_pred CCCEEEEecCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHHHHCC--CeEEEEeCCch
Confidence 789999999975321 1232 234455554444 44444444331 46788888744
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.033 Score=54.84 Aligned_cols=70 Identities=23% Similarity=0.302 Sum_probs=51.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
...+.|++++|.|+ |.||+.+++.+...|++|+++++++.+++.+.. .|..+. +. ++.+ ..
T Consensus 197 ~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-----~G~~~~-------~~---~e~v---~~ 257 (413)
T cd00401 197 DVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-----EGYEVM-------TM---EEAV---KE 257 (413)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-----cCCEEc-------cH---HHHH---cC
Confidence 34578999999996 689999999999999999999999887655432 132221 11 2233 36
Q ss_pred CcEEEEcCC
Q 017757 112 VDVLVVNQG 120 (366)
Q Consensus 112 id~vi~nAG 120 (366)
.|++|.++|
T Consensus 258 aDVVI~atG 266 (413)
T cd00401 258 GDIFVTTTG 266 (413)
T ss_pred CCEEEECCC
Confidence 799999887
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.019 Score=55.42 Aligned_cols=80 Identities=30% Similarity=0.355 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-cCCCc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-AGPVD 113 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~~~id 113 (366)
-+|+.+||.||+||+|.+.++-....|+..+++.++.++.+ ..+++ |.+ ...|-.+++-++++.+. .+++|
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l----GAd---~vvdy~~~~~~e~~kk~~~~~~D 227 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL----GAD---EVVDYKDENVVELIKKYTGKGVD 227 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc----CCc---EeecCCCHHHHHHHHhhcCCCcc
Confidence 36889999999999999999888888955555555555433 33333 211 33466775444444443 57899
Q ss_pred EEEEcCCCC
Q 017757 114 VLVVNQGVF 122 (366)
Q Consensus 114 ~vi~nAG~~ 122 (366)
+|+-|.|..
T Consensus 228 vVlD~vg~~ 236 (347)
T KOG1198|consen 228 VVLDCVGGS 236 (347)
T ss_pred EEEECCCCC
Confidence 999999963
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.019 Score=58.31 Aligned_cols=79 Identities=15% Similarity=0.356 Sum_probs=58.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++++++|.|+ |.+|+.+++.|...|. +|+++.|+.++.+...+++. +..+.+ ...++..+.+. ..
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~---g~~i~~-----~~~~dl~~al~---~a 330 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP---DVEIIY-----KPLDEMLACAA---EA 330 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC---CCceEe-----ecHhhHHHHHh---cC
Confidence 588999999998 9999999999999997 69999999988877766553 222221 22233444444 68
Q ss_pred cEEEEcCCCCCC
Q 017757 113 DVLVVNQGVFVP 124 (366)
Q Consensus 113 d~vi~nAG~~~~ 124 (366)
|+||.+.+...+
T Consensus 331 DVVIsAT~s~~p 342 (519)
T PLN00203 331 DVVFTSTSSETP 342 (519)
T ss_pred CEEEEccCCCCC
Confidence 999998875433
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.019 Score=54.58 Aligned_cols=73 Identities=23% Similarity=0.384 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+.+++++|.|+ |.+|+.+++.|.+.| .+|++++|+.++.++.++++. .. ..+.+++.+.+. ..|
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g----~~-------~~~~~~~~~~l~---~aD 240 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG----GN-------AVPLDELLELLN---EAD 240 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC----Ce-------EEeHHHHHHHHh---cCC
Confidence 78999999997 999999999999976 569999999888777666542 21 122334555444 579
Q ss_pred EEEEcCCCC
Q 017757 114 VLVVNQGVF 122 (366)
Q Consensus 114 ~vi~nAG~~ 122 (366)
++|.+.+..
T Consensus 241 vVi~at~~~ 249 (311)
T cd05213 241 VVISATGAP 249 (311)
T ss_pred EEEECCCCC
Confidence 999999854
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.031 Score=54.79 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH----HHHHHHHHhcCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF----DAVKTALDEAGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~----~~v~~~~~~~~~ 111 (366)
+.++|||||++..+|..+++.|.+.|++|++++.++.........+. +...+...-.++ +.+.+++++. +
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d-----~~~~~p~p~~d~~~~~~~L~~i~~~~-~ 76 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD-----GFYTIPSPRWDPDAYIQALLSIVQRE-N 76 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh-----heEEeCCCCCCHHHHHHHHHHHHHHc-C
Confidence 46899999999999999999999999999999998654432211111 121221122333 3344555554 5
Q ss_pred CcEEEEcCC
Q 017757 112 VDVLVVNQG 120 (366)
Q Consensus 112 id~vi~nAG 120 (366)
+|++|....
T Consensus 77 id~vIP~~e 85 (389)
T PRK06849 77 IDLLIPTCE 85 (389)
T ss_pred CCEEEECCh
Confidence 899998765
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.027 Score=52.80 Aligned_cols=102 Identities=25% Similarity=0.287 Sum_probs=68.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCC-CHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR-DFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls-~~~~v~~~~~~~~~id~ 114 (366)
.|+++.|+|++| ||.--++.--.-|++|++++++..+-+++.+.+. .+. -.|.+ |++.++++.+.. |.
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG----Ad~---fv~~~~d~d~~~~~~~~~---dg 249 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG----ADV---FVDSTEDPDIMKAIMKTT---DG 249 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC----cce---eEEecCCHHHHHHHHHhh---cC
Confidence 699999999877 9976666555669999999999877677766553 232 23666 788888888853 44
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
+++++-..... -+...+.+++. .|++|+++-...
T Consensus 250 ~~~~v~~~a~~-----------------------~~~~~~~~lk~-----~Gt~V~vg~p~~ 283 (360)
T KOG0023|consen 250 GIDTVSNLAEH-----------------------ALEPLLGLLKV-----NGTLVLVGLPEK 283 (360)
T ss_pred cceeeeecccc-----------------------chHHHHHHhhc-----CCEEEEEeCcCC
Confidence 44444311111 11234556666 689999987654
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.035 Score=49.72 Aligned_cols=83 Identities=19% Similarity=0.306 Sum_probs=60.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCc------------------hhHHHHHHHHHhhc-CCeEEE
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG------------------KKLEEAKQSIQLAT-GIEVAT 91 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~------------------~~~~~~~~~l~~~~-~~~v~~ 91 (366)
..++++++++|.|+ ||+|..+++.|+..|.. ++++|.+. .+.+.+.+.+.+.. ..++..
T Consensus 23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~ 101 (212)
T PRK08644 23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEA 101 (212)
T ss_pred HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence 45688999999995 89999999999999985 99998872 34445555555442 346666
Q ss_pred EEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 92 YSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 92 ~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
+...+++ +.+.++++ ..|++|.+.
T Consensus 102 ~~~~i~~-~~~~~~~~---~~DvVI~a~ 125 (212)
T PRK08644 102 HNEKIDE-DNIEELFK---DCDIVVEAF 125 (212)
T ss_pred EeeecCH-HHHHHHHc---CCCEEEECC
Confidence 6666654 34555554 679998885
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.017 Score=54.00 Aligned_cols=40 Identities=23% Similarity=0.329 Sum_probs=36.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
..+++||.++|.|+++-.|+.++..|.++|++|+++.|..
T Consensus 154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t 193 (283)
T PRK14192 154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT 193 (283)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4589999999999877799999999999999999998843
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.024 Score=47.29 Aligned_cols=44 Identities=20% Similarity=0.327 Sum_probs=39.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+++||.++|.|.+.-+|+.++..|.++|++|.+++++...++
T Consensus 23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~ 66 (140)
T cd05212 23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ 66 (140)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence 56899999999999999999999999999999999987654443
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.036 Score=51.32 Aligned_cols=116 Identities=20% Similarity=0.167 Sum_probs=69.6
Q ss_pred EEEEcCCChhHHHHHHHHHHCC----CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 40 VFITGGSSGIGLALAHQAAKEG----ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G----~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+.|+||+|.+|..++..|+..| .+|+++|+++++++....+++...... ....++..++..+.+ ...|++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~---~~~~i~~~~d~~~~~---~~aDiV 74 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL---ADIKVSITDDPYEAF---KDADVV 74 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc---cCcEEEECCchHHHh---CCCCEE
Confidence 4689998899999999999999 789999999988887777765432211 011111111222333 368999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
|..+|...... .+. ...+.- ..-+.+.+.+.+++... .+.++++|-
T Consensus 75 v~t~~~~~~~g---~~r---~~~~~~----n~~i~~~i~~~i~~~~p--~a~~i~~tN 120 (263)
T cd00650 75 IITAGVGRKPG---MGR---LDLLKR----NVPIVKEIGDNIEKYSP--DAWIIVVSN 120 (263)
T ss_pred EECCCCCCCcC---CCH---HHHHHH----HHHHHHHHHHHHHHHCC--CeEEEEecC
Confidence 99999754321 111 112222 33445555555555432 456666654
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0071 Score=44.26 Aligned_cols=35 Identities=29% Similarity=0.418 Sum_probs=23.4
Q ss_pred CC-CEEEEEcCCChhHHH--HHHHHHHCCCeEEEEecCc
Q 017757 36 KD-RHVFITGGSSGIGLA--LAHQAAKEGARVSILARSG 71 (366)
Q Consensus 36 ~g-k~vLITGas~gIG~a--ia~~L~~~G~~V~l~~r~~ 71 (366)
+| |++||+|+|+|.|++ ++..+ ..|++.+.++...
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk 74 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK 74 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence 55 899999999999999 55555 6688887776543
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.046 Score=54.04 Aligned_cols=69 Identities=23% Similarity=0.289 Sum_probs=50.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
..+.|++++|.|. |.||+.+|+.+...|++|+++++++.+...... .+.+ +.+ ++++++ ..
T Consensus 208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-----~G~~-------v~~---l~eal~---~a 268 (425)
T PRK05476 208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-----DGFR-------VMT---MEEAAE---LG 268 (425)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-----cCCE-------ecC---HHHHHh---CC
Confidence 4578999999996 799999999999999999999998876443321 1222 112 233443 68
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|++|.+.|
T Consensus 269 DVVI~aTG 276 (425)
T PRK05476 269 DIFVTATG 276 (425)
T ss_pred CEEEECCC
Confidence 99998876
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.026 Score=56.42 Aligned_cols=79 Identities=28% Similarity=0.376 Sum_probs=56.7
Q ss_pred CCCCCEEEEEcCC----------------ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCC
Q 017757 34 PIKDRHVFITGGS----------------SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97 (366)
Q Consensus 34 ~l~gk~vLITGas----------------~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls 97 (366)
+|+||++|||+|. |-.|.++|+++..+|++|++++-... + . .+..+..+ ++.
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~--~p~~v~~i--~V~ 320 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A--DPQGVKVI--HVE 320 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C--CCCCceEE--Eec
Confidence 5899999999874 58999999999999999999874322 1 0 12234333 455
Q ss_pred CHHHHHHHHHhcCCCcEEEEcCCCCCC
Q 017757 98 DFDAVKTALDEAGPVDVLVVNQGVFVP 124 (366)
Q Consensus 98 ~~~~v~~~~~~~~~id~vi~nAG~~~~ 124 (366)
+.+++.+.+++.-+.|++|++|++.-.
T Consensus 321 ta~eM~~av~~~~~~Di~I~aAAVaDy 347 (475)
T PRK13982 321 SARQMLAAVEAALPADIAIFAAAVADW 347 (475)
T ss_pred CHHHHHHHHHhhCCCCEEEEeccccce
Confidence 666766666554347999999997543
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.061 Score=49.31 Aligned_cols=84 Identities=19% Similarity=0.296 Sum_probs=59.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEE
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVA 90 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~ 90 (366)
...+++++|+|.|+ ||+|..+++.|+..|. +++++|.+. .+.+.+++.+.+.. ..++.
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~ 105 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIE 105 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEE
Confidence 45789999999997 9999999999999996 588887653 23344455555443 34666
Q ss_pred EEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 91 TYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 91 ~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
.+...++ ++.+.++++ ..|++|.+..
T Consensus 106 ~~~~~i~-~~~~~~~~~---~~DiVi~~~D 131 (245)
T PRK05690 106 TINARLD-DDELAALIA---GHDLVLDCTD 131 (245)
T ss_pred EEeccCC-HHHHHHHHh---cCCEEEecCC
Confidence 6666665 344555555 6799998874
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.024 Score=56.55 Aligned_cols=71 Identities=20% Similarity=0.393 Sum_probs=53.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH-HHhcCCCcEEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTA-LDEAGPVDVLVV 117 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~-~~~~~~id~vi~ 117 (366)
+++|.|+ |.+|+++++.|.++|.+|++++++++..+...+. ..+..+.+|.++.+.++++ ++ ..|.+|.
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~------~~~~~~~gd~~~~~~l~~~~~~---~a~~vi~ 71 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR------LDVRTVVGNGSSPDVLREAGAE---DADLLIA 71 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh------cCEEEEEeCCCCHHHHHHcCCC---cCCEEEE
Confidence 5888887 9999999999999999999999998876655431 2456677888887766665 33 4566555
Q ss_pred cC
Q 017757 118 NQ 119 (366)
Q Consensus 118 nA 119 (366)
+.
T Consensus 72 ~~ 73 (453)
T PRK09496 72 VT 73 (453)
T ss_pred ec
Confidence 54
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.023 Score=61.91 Aligned_cols=78 Identities=21% Similarity=0.205 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC-Ce-------------EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHH
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEG-AR-------------VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G-~~-------------V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~ 100 (366)
-+.|.++|.|+ |.+|+..++.|++.. ++ |++++++.++++++.+... ++..+++|++|.+
T Consensus 567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-----~~~~v~lDv~D~e 640 (1042)
T PLN02819 567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-----NAEAVQLDVSDSE 640 (1042)
T ss_pred ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-----CCceEEeecCCHH
Confidence 34778999996 999999999999863 33 8889998877776655431 4667899999999
Q ss_pred HHHHHHHhcCCCcEEEEcCCC
Q 017757 101 AVKTALDEAGPVDVLVVNQGV 121 (366)
Q Consensus 101 ~v~~~~~~~~~id~vi~nAG~ 121 (366)
++.++++ .+|+||++...
T Consensus 641 ~L~~~v~---~~DaVIsalP~ 658 (1042)
T PLN02819 641 SLLKYVS---QVDVVISLLPA 658 (1042)
T ss_pred HHHHhhc---CCCEEEECCCc
Confidence 9888877 58999999865
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.054 Score=46.23 Aligned_cols=45 Identities=31% Similarity=0.438 Sum_probs=35.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEE 76 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~ 76 (366)
..+++||+++|.|.+.-+|+-++..|.++|+.|.++......+++
T Consensus 31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~ 75 (160)
T PF02882_consen 31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE 75 (160)
T ss_dssp T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence 457999999999999999999999999999999998887655543
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.047 Score=52.40 Aligned_cols=75 Identities=23% Similarity=0.333 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.|++++|+|+ |++|...+..+...|+ +|+++++++++++.+. ++ |.+. ..|..+ +++.+..+..+.+|+
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l----Ga~~---vi~~~~-~~~~~~~~~~g~~D~ 238 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM----GADK---LVNPQN-DDLDHYKAEKGYFDV 238 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc----CCcE---EecCCc-ccHHHHhccCCCCCE
Confidence 6899999986 8999999988888898 5888999887765443 23 3222 123333 234444443456999
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
+|.++|
T Consensus 239 vid~~G 244 (343)
T PRK09880 239 SFEVSG 244 (343)
T ss_pred EEECCC
Confidence 999998
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.051 Score=48.22 Aligned_cols=85 Identities=16% Similarity=0.293 Sum_probs=57.0
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC---chh---------------HHHHHHHHHhhc-CCeE
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS---GKK---------------LEEAKQSIQLAT-GIEV 89 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~---~~~---------------~~~~~~~l~~~~-~~~v 89 (366)
....+|+.++++|.|+ ||+|..+|..|++.|. +++++|++ .+. .+.+.+.+.+.. ..++
T Consensus 14 ~~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i 92 (200)
T TIGR02354 14 KIVQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEI 92 (200)
T ss_pred HHHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEE
Confidence 3345689999999996 8999999999999998 69999988 222 222233333322 2456
Q ss_pred EEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 90 ATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 90 ~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
..+..+++. +.+.++++ ..|+||-+.
T Consensus 93 ~~~~~~i~~-~~~~~~~~---~~DlVi~a~ 118 (200)
T TIGR02354 93 EAYDEKITE-ENIDKFFK---DADIVCEAF 118 (200)
T ss_pred EEeeeeCCH-hHHHHHhc---CCCEEEECC
Confidence 666666653 44555544 678888773
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.043 Score=52.39 Aligned_cols=117 Identities=15% Similarity=0.198 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
.+.+++.|+|| |.+|..++..++..| ++|+++|++++.++....++.... +.... +.. -+| .+ .+ .
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d---~~-~l---~ 72 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNN---YE-DI---K 72 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCC---HH-Hh---C
Confidence 46778999997 889999999999999 789999998876543322222110 11111 111 112 22 22 3
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
..|+||.++|..... ..+. .+.+..|. -+.+.+.+.+.+... .+.++++|.
T Consensus 73 ~ADiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p--~a~vivvsN 123 (319)
T PTZ00117 73 DSDVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCP--NAFVICVTN 123 (319)
T ss_pred CCCEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCC--CeEEEEecC
Confidence 679999999964321 1222 34555665 456677777666542 455777665
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.027 Score=48.95 Aligned_cols=77 Identities=25% Similarity=0.270 Sum_probs=52.4
Q ss_pred cCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Q 017757 27 RPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 27 ~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~ 106 (366)
........+.|+++.|.| .|.||+++|+.+..-|++|+..+|+........+ . .+ . ..++++++
T Consensus 26 ~~~~~~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~------~~---~-----~~~l~ell 89 (178)
T PF02826_consen 26 RERFPGRELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-F------GV---E-----YVSLDELL 89 (178)
T ss_dssp HTTTTBS-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-T------TE---E-----ESSHHHHH
T ss_pred CcCCCccccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc-c------cc---e-----eeehhhhc
Confidence 355666789999999998 5999999999999999999999998875441111 0 11 1 11355666
Q ss_pred HhcCCCcEEEEcCCCC
Q 017757 107 DEAGPVDVLVVNQGVF 122 (366)
Q Consensus 107 ~~~~~id~vi~nAG~~ 122 (366)
+ ..|+|+++....
T Consensus 90 ~---~aDiv~~~~plt 102 (178)
T PF02826_consen 90 A---QADIVSLHLPLT 102 (178)
T ss_dssp H---H-SEEEE-SSSS
T ss_pred c---hhhhhhhhhccc
Confidence 6 468888887643
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.083 Score=63.01 Aligned_cols=182 Identities=13% Similarity=0.079 Sum_probs=103.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH----hc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD----EA 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~----~~ 109 (366)
.+.++.++|++.+++++.+++.+|.++|+.|+++..... ...... ..+..+-.+.+.--|..++..+++ ..
T Consensus 1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1826 (2582)
T TIGR02813 1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSAS----PLASAIASVTLGTIDDTSIEAVIKDIEEKT 1826 (2582)
T ss_pred cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cccccc----ccccccccccccccchHHHHHHHHhhhccc
Confidence 355888999988999999999999999999887742211 000000 001122233444445555555543 34
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+.++.+||..+...... ...+...+...-...+...|.+.|.+.+.+...+ ++.++.++...|-.
T Consensus 1827 ~~~~g~i~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~---~~~~~~vsr~~G~~----------- 1891 (2582)
T TIGR02813 1827 AQIDGFIHLQPQHKSVA-DKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA---RASFVTVSRIDGGF----------- 1891 (2582)
T ss_pred cccceEEEecccccccc-ccccccccchhhHHHHHHHHHHHHhhchhhccCC---CeEEEEEEecCCcc-----------
Confidence 78999999877542200 0000001111222445556777887766655432 57899999877654
Q ss_pred cccccccccCCCCCCccc-cccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC
Q 017757 190 NENKLCESSGKGHGGYHV-TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP 256 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG 256 (366)
+...... .++. . ..-....+++.+|+|+++.|+-....|...+.|.
T Consensus 1892 -----------g~~~~~~~~~~~---------~-~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1892 -----------GYSNGDADSGTQ---------Q-VKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred -----------ccCCcccccccc---------c-cccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence 2211110 0000 0 0012347899999999999996555666666664
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.04 Score=51.56 Aligned_cols=77 Identities=32% Similarity=0.436 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
+|++++|+|+++++|.++++.+...|++|+++.+++++.+.+ .++ +.+. ..+..+.+..+++.+.. +++|
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~---~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL----GADI---AINYREEDFVEVVKAETGGKGVD 210 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CCcE---EEecCchhHHHHHHHHcCCCCeE
Confidence 678999999999999999999999999999999987765433 222 3221 12333344334443332 3699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++++++|
T Consensus 211 ~~i~~~~ 217 (325)
T TIGR02824 211 VILDIVG 217 (325)
T ss_pred EEEECCc
Confidence 9999987
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.17 Score=48.42 Aligned_cols=124 Identities=15% Similarity=0.209 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
++.+++.|+|+ |.+|..+|..++.+|. +|+++|++++.++....++... .+....... .+|.+ .+.
T Consensus 4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~-------~l~ 73 (321)
T PTZ00082 4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE-------DIA 73 (321)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH-------HhC
Confidence 34578999995 8899999999999994 8999999987643222222111 111121111 12221 234
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
..|+||.++|........+.+.+. .+.+..|+ .+.+.+.+.+.+... .+.++++|.-.
T Consensus 74 ~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p--~a~~iv~sNP~ 131 (321)
T PTZ00082 74 GSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCP--NAFVIVITNPL 131 (321)
T ss_pred CCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCC--CeEEEEecCcH
Confidence 689999999975432211212122 33455554 466777777766542 45677777544
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.032 Score=52.10 Aligned_cols=55 Identities=20% Similarity=0.349 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 14 LPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
++|.-.-++.++.+ ...+++||+++|+|.+.-+|+.++..|.++|++|+++.+..
T Consensus 138 ~PcTp~ai~~ll~~---~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t 192 (286)
T PRK14175 138 VPCTPLGIMEILKH---ADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS 192 (286)
T ss_pred CCCcHHHHHHHHHH---cCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 34444444444432 23479999999999999999999999999999999998754
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.043 Score=43.68 Aligned_cols=71 Identities=25% Similarity=0.342 Sum_probs=54.7
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
++|.|. +.+|+.+++.|.+.+.+|++++++++..+++.++ .+.++.+|.++++.++++-- .+.+.++...
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~-------~~~~i~gd~~~~~~l~~a~i--~~a~~vv~~~ 70 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE-------GVEVIYGDATDPEVLERAGI--EKADAVVILT 70 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT-------TSEEEES-TTSHHHHHHTTG--GCESEEEEES
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc-------ccccccccchhhhHHhhcCc--cccCEEEEcc
Confidence 577886 6899999999999777999999998876655432 26688899999998887732 3678888777
Q ss_pred C
Q 017757 120 G 120 (366)
Q Consensus 120 G 120 (366)
.
T Consensus 71 ~ 71 (116)
T PF02254_consen 71 D 71 (116)
T ss_dssp S
T ss_pred C
Confidence 5
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.072 Score=51.64 Aligned_cols=84 Identities=18% Similarity=0.264 Sum_probs=61.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEE
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVA 90 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~ 90 (366)
..++++++|+|.|+ ||+|..+++.|+..|. +++++|.+. .+.+.+++.+.+.. ..++.
T Consensus 23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~ 101 (355)
T PRK05597 23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVT 101 (355)
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEE
Confidence 45688999999996 8999999999999997 588888764 34556666666543 34666
Q ss_pred EEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 91 TYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 91 ~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
.+..+++. +...++++ ..|+||.+..
T Consensus 102 ~~~~~i~~-~~~~~~~~---~~DvVvd~~d 127 (355)
T PRK05597 102 VSVRRLTW-SNALDELR---DADVILDGSD 127 (355)
T ss_pred EEEeecCH-HHHHHHHh---CCCEEEECCC
Confidence 66666664 34445555 6788888874
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.025 Score=50.28 Aligned_cols=41 Identities=24% Similarity=0.389 Sum_probs=36.4
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
|...+++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus 3 Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 3 PLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred ceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3456899999999997 8999999999999999999998754
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.18 Score=48.13 Aligned_cols=75 Identities=24% Similarity=0.298 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|++++|+|+ |++|..++..+...|++ |+++++++++.+.+ +++ +.+. ..|..+.+ .+++.+.. .++
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~----ga~~---~i~~~~~~-~~~~~~~~~~~~~ 232 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL----GADF---VINSGQDD-VQEIRELTSGAGA 232 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh----CCCE---EEcCCcch-HHHHHHHhCCCCC
Confidence 4899999986 89999999988889999 99998887765543 333 3221 22434433 33433322 369
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|++|.+.|
T Consensus 233 d~vid~~g 240 (339)
T cd08239 233 DVAIECSG 240 (339)
T ss_pred CEEEECCC
Confidence 99999988
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.072 Score=51.90 Aligned_cols=85 Identities=16% Similarity=0.320 Sum_probs=62.1
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC-------------------chhHHHHHHHHHhhc-CCeE
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS-------------------GKKLEEAKQSIQLAT-GIEV 89 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~-~~~v 89 (366)
....+++.+|+|.|+ ||+|..+++.|+..|. +++++|.+ ..+.+.+++.+.+.. ..++
T Consensus 35 ~q~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i 113 (370)
T PRK05600 35 QQERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRV 113 (370)
T ss_pred HHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCee
Confidence 345688999999995 8999999999999996 79999886 234455555565543 3466
Q ss_pred EEEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 90 ATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 90 ~~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
..+...++ ++.+.++++ ..|+||.|..
T Consensus 114 ~~~~~~i~-~~~~~~~~~---~~DlVid~~D 140 (370)
T PRK05600 114 NALRERLT-AENAVELLN---GVDLVLDGSD 140 (370)
T ss_pred EEeeeecC-HHHHHHHHh---CCCEEEECCC
Confidence 67666665 445556665 6799988875
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.31 Score=46.34 Aligned_cols=70 Identities=26% Similarity=0.321 Sum_probs=48.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
...|+||++.|.|- |-||+++|+.|...|.+|++..|.....+.+ +. .+..+ . ++.++++ .
T Consensus 11 ~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A-~~----~G~~v-------~---sl~Eaak---~ 71 (335)
T PRK13403 11 VELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVA-KA----DGFEV-------M---SVSEAVR---T 71 (335)
T ss_pred hhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHH-HH----cCCEE-------C---CHHHHHh---c
Confidence 34589999999994 8899999999999999999887753332221 11 12211 1 4566666 5
Q ss_pred CcEEEEcCC
Q 017757 112 VDVLVVNQG 120 (366)
Q Consensus 112 id~vi~nAG 120 (366)
-|+|+.+..
T Consensus 72 ADVV~llLP 80 (335)
T PRK13403 72 AQVVQMLLP 80 (335)
T ss_pred CCEEEEeCC
Confidence 799988864
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.082 Score=53.43 Aligned_cols=111 Identities=16% Similarity=0.190 Sum_probs=72.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-------------HH
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-------------FD 100 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-------------~~ 100 (366)
.+.+.+++|.|+ |.+|+..+..+...|++|++++++.++++.+.+ + +. .++..|..+ .+
T Consensus 161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l----Ga--~~v~v~~~e~g~~~~gYa~~~s~~ 232 (511)
T TIGR00561 161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M----GA--EFLELDFKEEGGSGDGYAKVMSEE 232 (511)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CC--eEEeccccccccccccceeecCHH
Confidence 455789999995 999999999999999999999999887554432 2 22 233334311 11
Q ss_pred H---HHH-HHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 101 A---VKT-ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 101 ~---v~~-~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
. ..+ +.++....|++|+++-+.... .+..+.+..+..|++ .+.||-+++..|
T Consensus 233 ~~~~~~~~~~e~~~~~DIVI~TalipG~~-------------------aP~Lit~emv~~MKp-----GsvIVDlA~d~G 288 (511)
T TIGR00561 233 FIAAEMELFAAQAKEVDIIITTALIPGKP-------------------APKLITEEMVDSMKA-----GSVIVDLAAEQG 288 (511)
T ss_pred HHHHHHHHHHHHhCCCCEEEECcccCCCC-------------------CCeeehHHHHhhCCC-----CCEEEEeeeCCC
Confidence 1 122 233357899999999443211 223445566677766 568888888654
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.13 Score=48.53 Aligned_cols=77 Identities=23% Similarity=0.247 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-cCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-AGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~~~id~ 114 (366)
+|.+++|.|+++++|.+++......|++|+.+.+++++.+.+ .++ +.+. . .|..+.+..+.+.+. -+.+|.
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~-v--~~~~~~~~~~~~~~~~~~~vd~ 210 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL----GCDR-P--INYKTEDLGEVLKKEYPKGVDV 210 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc----CCce-E--EeCCCccHHHHHHHhcCCCCeE
Confidence 588999999999999999998888999999998887665444 222 2211 1 222222211222111 146899
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
++++.|
T Consensus 211 v~~~~g 216 (329)
T cd08250 211 VYESVG 216 (329)
T ss_pred EEECCc
Confidence 999876
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.09 Score=45.55 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=52.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCc------------------hhHHHHHHHHHhhc-CCeEEEEEecCCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGAR-VSILARSG------------------KKLEEAKQSIQLAT-GIEVATYSADVRD 98 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~------------------~~~~~~~~~l~~~~-~~~v~~~~~Dls~ 98 (366)
+++|.|+ ||+|..+++.|++.|.. ++++|.+. .+.+.+.+.+++.. ..++..+...++.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 3678885 99999999999999985 99999875 23344444554442 3456666666544
Q ss_pred HHHHHHHHHhcCCCcEEEEcCC
Q 017757 99 FDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 99 ~~~v~~~~~~~~~id~vi~nAG 120 (366)
+.+.++++ ..|++|.+..
T Consensus 80 -~~~~~~l~---~~DlVi~~~d 97 (174)
T cd01487 80 -NNLEGLFG---DCDIVVEAFD 97 (174)
T ss_pred -hhHHHHhc---CCCEEEECCC
Confidence 44555555 6788888853
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.12 Score=42.99 Aligned_cols=77 Identities=19% Similarity=0.358 Sum_probs=53.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEEEEEecCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVATYSADVR 97 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~~~~~Dls 97 (366)
+++|.|+ ||+|.++++.|+..|. ++.++|.+. .+.+.+++.+++.. ..++..+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 3788886 9999999999999998 588887651 33445555555554 356666666665
Q ss_pred CHHHHHHHHHhcCCCcEEEEcCC
Q 017757 98 DFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 98 ~~~~v~~~~~~~~~id~vi~nAG 120 (366)
+... .+++ .+.|++|.+..
T Consensus 80 ~~~~-~~~~---~~~diVi~~~d 98 (143)
T cd01483 80 EDNL-DDFL---DGVDLVIDAID 98 (143)
T ss_pred hhhH-HHHh---cCCCEEEECCC
Confidence 4432 3333 47899998875
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.14 Score=49.29 Aligned_cols=73 Identities=22% Similarity=0.351 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC---chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARS---GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~---~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.|++++|+|+ |++|...+..+...|++|++++|+ +++.+ .++++ +... .|..+. ++.+ .+..+.+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~----Ga~~----v~~~~~-~~~~-~~~~~~~ 239 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL----GATY----VNSSKT-PVAE-VKLVGEF 239 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc----CCEE----ecCCcc-chhh-hhhcCCC
Confidence 6889999985 999999998888889999999984 44433 22222 3332 233222 2222 2223579
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|++|.++|
T Consensus 240 d~vid~~g 247 (355)
T cd08230 240 DLIIEATG 247 (355)
T ss_pred CEEEECcC
Confidence 99999998
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.064 Score=50.21 Aligned_cols=77 Identities=29% Similarity=0.319 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
++++++|+|+++++|++++..+...|++|+.++++.++.+.+ .+. +.. ..+ |....+..+.+.+.. ..+|
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g~~-~~~--~~~~~~~~~~~~~~~~~~~~d 215 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL----GAA-HVI--VTDEEDLVAEVLRITGGKGVD 215 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----CCC-EEE--ecCCccHHHHHHHHhCCCCce
Confidence 578999999999999999999999999999999887665544 222 221 112 222222222333222 3699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++++++|
T Consensus 216 ~vi~~~~ 222 (328)
T cd08268 216 VVFDPVG 222 (328)
T ss_pred EEEECCc
Confidence 9999987
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.073 Score=49.73 Aligned_cols=85 Identities=20% Similarity=0.247 Sum_probs=55.8
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCch-------------------hHHHHHHHHHhhc-CCe
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGK-------------------KLEEAKQSIQLAT-GIE 88 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~-------------------~~~~~~~~l~~~~-~~~ 88 (366)
....+|++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.- +.+.+++.+.+.. ..+
T Consensus 20 e~Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~ 98 (287)
T PRK08223 20 TEQQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELE 98 (287)
T ss_pred HHHHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCE
Confidence 3355789999999995 8999999999999997 5888877632 2333444444332 245
Q ss_pred EEEEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 89 VATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 89 v~~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
+..+...++. +.+.++++ ..|+||.+.
T Consensus 99 V~~~~~~l~~-~n~~~ll~---~~DlVvD~~ 125 (287)
T PRK08223 99 IRAFPEGIGK-ENADAFLD---GVDVYVDGL 125 (287)
T ss_pred EEEEecccCc-cCHHHHHh---CCCEEEECC
Confidence 5556555553 33455555 567777544
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.052 Score=54.13 Aligned_cols=42 Identities=21% Similarity=0.218 Sum_probs=37.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~ 74 (366)
...+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+.
T Consensus 249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 468999999999964 699999999999999999999887654
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.06 Score=53.60 Aligned_cols=42 Identities=21% Similarity=0.185 Sum_probs=36.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+.||+++|.|. |.||+.+|+.+...|++|+++++++.+..
T Consensus 250 i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~ 291 (477)
T PLN02494 250 VMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICAL 291 (477)
T ss_pred CccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhH
Confidence 3478999999996 69999999999999999999999876543
|
|
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.24 Score=47.30 Aligned_cols=76 Identities=24% Similarity=0.349 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
..|.+++|+|+++++|.++++.....|++|+.+.++ ++. +..+++ +.+ ...|..+.+..+.+.+ .+.+|+
T Consensus 161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~-~~~~~~----g~~---~~~~~~~~~~~~~l~~-~~~vd~ 230 (350)
T cd08248 161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAI-PLVKSL----GAD---DVIDYNNEDFEEELTE-RGKFDV 230 (350)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chH-HHHHHh----CCc---eEEECCChhHHHHHHh-cCCCCE
Confidence 358999999999999999999999999998887764 222 222222 221 1234444343444333 357999
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
++++.|
T Consensus 231 vi~~~g 236 (350)
T cd08248 231 ILDTVG 236 (350)
T ss_pred EEECCC
Confidence 999987
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.12 Score=46.84 Aligned_cols=40 Identities=23% Similarity=0.350 Sum_probs=33.8
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG 71 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~ 71 (366)
...++++++++|.|+ ||+|.++++.|+..|. +++++|.+.
T Consensus 21 ~q~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 21 GQEKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred HHHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 355788999999995 8999999999999997 588887653
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.031 Score=46.09 Aligned_cols=56 Identities=18% Similarity=0.284 Sum_probs=45.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~ 100 (366)
+++.+++.|.+ .|.++|..|++.|++|+++|.++...+.+.+. .+.++..|+.+++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~ 71 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN 71 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC
Confidence 56789999976 78889999999999999999999876655432 3567888888754
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.073 Score=53.10 Aligned_cols=78 Identities=23% Similarity=0.331 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
...+.++|.|+ |.+|+.+++.|.++|.+|++++++++..++..++. ..+..+..|.++++.++++- ....|.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~L~~~~--~~~a~~ 300 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-----PNTLVLHGDGTDQELLEEEG--IDEADA 300 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-----CCCeEEECCCCCHHHHHhcC--CccCCE
Confidence 46788999997 99999999999999999999999988776655432 24567889999998776543 236788
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
+|.+..
T Consensus 301 vi~~~~ 306 (453)
T PRK09496 301 FIALTN 306 (453)
T ss_pred EEECCC
Confidence 876654
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.36 Score=45.89 Aligned_cols=115 Identities=17% Similarity=0.237 Sum_probs=72.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcC--CeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.++.|+|+ |.+|.++|..|+..|. ++++++.+.+.++....+++.... ....... -.|.+ . +...|
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~---~----~~~ad 73 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYS---V----TANSK 73 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHH---H----hCCCC
Confidence 47899996 9999999999999874 699999998877766666654321 1111111 01222 1 33689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
++|.+||..... ..+.. +.++.| .-+++.+.+.+++... .+.++++|.-
T Consensus 74 ivvitaG~~~k~---g~~R~---dll~~N----~~i~~~~~~~i~~~~p--~~~vivvsNP 122 (312)
T cd05293 74 VVIVTAGARQNE---GESRL---DLVQRN----VDIFKGIIPKLVKYSP--NAILLVVSNP 122 (312)
T ss_pred EEEECCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHHHhCC--CcEEEEccCh
Confidence 999999975431 22333 344444 4456666666666542 4677777753
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.12 Score=46.00 Aligned_cols=42 Identities=29% Similarity=0.487 Sum_probs=36.4
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
|...+++||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus 2 P~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~ 43 (205)
T TIGR01470 2 PVFANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE 43 (205)
T ss_pred CeEEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 3446799999999995 88999999999999999999987654
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.057 Score=52.16 Aligned_cols=83 Identities=19% Similarity=0.186 Sum_probs=53.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
...+.||++.|.|- |.||+++|+.|...|++|+..+|+..........+.. ..+..+........++++++. .
T Consensus 154 ~~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~ell~---~ 226 (347)
T PLN02928 154 GDTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPN---GDVDDLVDEKGGHEDIYEFAG---E 226 (347)
T ss_pred ccCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhcccc---ccccccccccCcccCHHHHHh---h
Confidence 35799999999995 9999999999999999999999874321111000000 000000001113445667776 5
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
-|+|+.+...
T Consensus 227 aDiVvl~lPl 236 (347)
T PLN02928 227 ADIVVLCCTL 236 (347)
T ss_pred CCEEEECCCC
Confidence 6999988864
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.16 Score=46.37 Aligned_cols=84 Identities=21% Similarity=0.313 Sum_probs=56.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEE
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVA 90 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~ 90 (366)
...+++.+|+|.|+ ||+|..+++.|+..|. +++++|.+. .+.+.+++.+.+.. ..++.
T Consensus 19 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~ 97 (240)
T TIGR02355 19 QEALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAIN 97 (240)
T ss_pred HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEE
Confidence 34688999999995 8999999999999996 588877653 22334444554442 23455
Q ss_pred EEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 91 TYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 91 ~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
.+...++ .+.+.++++ ..|++|.+..
T Consensus 98 ~~~~~i~-~~~~~~~~~---~~DlVvd~~D 123 (240)
T TIGR02355 98 PINAKLD-DAELAALIA---EHDIVVDCTD 123 (240)
T ss_pred EEeccCC-HHHHHHHhh---cCCEEEEcCC
Confidence 5544443 344555555 5788888775
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.082 Score=52.74 Aligned_cols=40 Identities=30% Similarity=0.431 Sum_probs=34.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHH
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAK 78 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~ 78 (366)
++.|+||.|++|.++++.|.+.|.+|++.+|+++..++..
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a 41 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA 41 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence 5889999999999999999999999999999876654443
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.053 Score=50.99 Aligned_cols=42 Identities=14% Similarity=0.236 Sum_probs=38.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
..+++||++.|.|.++-+|+.+|..|.++|++|+++.+....
T Consensus 154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~ 195 (301)
T PRK14194 154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD 195 (301)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC
Confidence 468999999999999999999999999999999999776543
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.29 Score=47.00 Aligned_cols=41 Identities=29% Similarity=0.385 Sum_probs=36.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA 77 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~ 77 (366)
.|++++|.|+ |++|..++..+...|++|+++++++++++.+
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 5899999999 9999999999989999999999988876644
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.15 Score=47.66 Aligned_cols=104 Identities=21% Similarity=0.287 Sum_probs=72.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-c-CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-A-GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~-~~id 113 (366)
.|.+++|++|+|..|.....----+|++|+.+.-..++.+-+.+++. .+. ..|-..+ ++.+.+++ . ..||
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG----fD~---~idyk~~-d~~~~L~~a~P~GID 221 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG----FDA---GIDYKAE-DFAQALKEACPKGID 221 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC----Cce---eeecCcc-cHHHHHHHHCCCCeE
Confidence 49999999999999976555444579999999888888776666553 221 1233333 44444443 2 6899
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
+.+-|.|.. +..++++.|.. .+||+.++-++.+.
T Consensus 222 vyfeNVGg~--------------------------v~DAv~~~ln~-----~aRi~~CG~IS~YN 255 (340)
T COG2130 222 VYFENVGGE--------------------------VLDAVLPLLNL-----FARIPVCGAISQYN 255 (340)
T ss_pred EEEEcCCch--------------------------HHHHHHHhhcc-----ccceeeeeehhhcC
Confidence 999999842 23467777776 57999998887765
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.067 Score=49.93 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=38.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~ 74 (366)
..+++||.++|.|-|.-+|+-++..|.++|+.|+++.+....+
T Consensus 154 ~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l 196 (285)
T PRK10792 154 GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNL 196 (285)
T ss_pred CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCH
Confidence 3589999999999999999999999999999999998765443
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.049 Score=46.40 Aligned_cols=39 Identities=26% Similarity=0.438 Sum_probs=34.6
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR 69 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r 69 (366)
|...+++||.++|.|| |.+|...++.|.+.|++|++++.
T Consensus 6 P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 6 PLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred ceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence 4567899999999996 88999999999999999998853
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.11 Score=42.24 Aligned_cols=74 Identities=27% Similarity=0.325 Sum_probs=50.8
Q ss_pred EEEEEcCCChhHHHHHHHHHH-CCCeEE-EEecCc----------------------hhHHHHHHHHHhhcCCeEEEEEe
Q 017757 39 HVFITGGSSGIGLALAHQAAK-EGARVS-ILARSG----------------------KKLEEAKQSIQLATGIEVATYSA 94 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~-~G~~V~-l~~r~~----------------------~~~~~~~~~l~~~~~~~v~~~~~ 94 (366)
++.|.|++|-+|+.+++.+.+ .|.+++ .++|+. +.+++..++ .+ +..
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~------~D---VvI 72 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE------AD---VVI 72 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-------S---EEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc------CC---EEE
Confidence 588999999999999999999 677854 566665 223332222 12 567
Q ss_pred cCCCHHHHHHHHHhc--CCCcEEEEcCCC
Q 017757 95 DVRDFDAVKTALDEA--GPVDVLVVNQGV 121 (366)
Q Consensus 95 Dls~~~~v~~~~~~~--~~id~vi~nAG~ 121 (366)
|.|.++.+.+.++.. .++.+|+-..|.
T Consensus 73 DfT~p~~~~~~~~~~~~~g~~~ViGTTG~ 101 (124)
T PF01113_consen 73 DFTNPDAVYDNLEYALKHGVPLVIGTTGF 101 (124)
T ss_dssp EES-HHHHHHHHHHHHHHT-EEEEE-SSS
T ss_pred EcCChHHhHHHHHHHHhCCCCEEEECCCC
Confidence 999999887776653 378899989886
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.11 Score=49.28 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=68.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
++.|+|++|.+|.++|..|+.++. +++++|+++. +-.+.++.... ......... +.++ ..+.+...|++|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a--~g~a~DL~~~~-~~~~i~~~~--~~~~---~~~~~~daDivv 72 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGA--AGVAADLSHIP-TAASVKGFS--GEEG---LENALKGADVVV 72 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCC--cEEEchhhcCC-cCceEEEec--CCCc---hHHHcCCCCEEE
Confidence 368999999999999999999874 6999999762 21111222111 011111100 0011 123345789999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
.+||..... ..+ -.+.++.|+. +++.+.+.+.+... .+.++.+|.-.
T Consensus 73 itaG~~~~~---g~~---R~dll~~N~~----I~~~i~~~i~~~~p--~~iiivvsNPv 119 (312)
T TIGR01772 73 IPAGVPRKP---GMT---RDDLFNVNAG----IVKDLVAAVAESCP--KAMILVITNPV 119 (312)
T ss_pred EeCCCCCCC---Ccc---HHHHHHHhHH----HHHHHHHHHHHhCC--CeEEEEecCch
Confidence 999975321 112 3445666666 66666666666542 45677777644
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.14 Score=48.89 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=68.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA-------RVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
++.|+|++|.+|.++|..|...|. ++++.|.++ +.++..+.++....... .. +..-.. .-.+.+
T Consensus 5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~---~~-~~~i~~---~~~~~~ 77 (323)
T TIGR01759 5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPL---LA-GVVATT---DPEEAF 77 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccc---cC-CcEEec---ChHHHh
Confidence 588999999999999999999884 799999965 33454444444321000 00 100000 112233
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
...|++|.+||..... ..+ -.+.++.|.. +++.+.+.+.+... ..+.++.+|.
T Consensus 78 ~daDvVVitAG~~~k~---g~t---R~dll~~Na~----i~~~i~~~i~~~~~-~~~iiivvsN 130 (323)
T TIGR01759 78 KDVDAALLVGAFPRKP---GME---RADLLSKNGK----IFKEQGKALNKVAK-KDVKVLVVGN 130 (323)
T ss_pred CCCCEEEEeCCCCCCC---CCc---HHHHHHHHHH----HHHHHHHHHHhhCC-CCeEEEEeCC
Confidence 4689999999975321 123 3445666654 45555555555431 1356666664
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.11 Score=52.42 Aligned_cols=78 Identities=17% Similarity=0.173 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++++++|.|+ |++|.++|+.|.++|++|++++++.. ......+.++.. + +.++..+-.. .....
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~-g--v~~~~~~~~~---------~~~~~ 79 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL-G--ATVRLGPGPT---------LPEDT 79 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc-C--CEEEECCCcc---------ccCCC
Confidence 467899999996 88999999999999999999986543 223333444432 3 3333222111 12358
Q ss_pred cEEEEcCCCCCC
Q 017757 113 DVLVVNQGVFVP 124 (366)
Q Consensus 113 d~vi~nAG~~~~ 124 (366)
|.||...|+...
T Consensus 80 D~Vv~s~Gi~~~ 91 (480)
T PRK01438 80 DLVVTSPGWRPD 91 (480)
T ss_pred CEEEECCCcCCC
Confidence 999999998644
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.19 Score=50.01 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=73.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHC-------CC--eEEEEecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHHH
Q 017757 39 HVFITGGSSGIGLALAHQAAKE-------GA--RVSILARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~-------G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~~ 106 (366)
++.|+|++|.+|.++|..|+.. |. ++++++++.+.++-.+-+++... ..++.. .. .+ .
T Consensus 102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~-------y 171 (444)
T PLN00112 102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DP-------Y 171 (444)
T ss_pred EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CC-------H
Confidence 5899999999999999999998 64 79999999999887777776532 112211 11 11 2
Q ss_pred HhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCCCcEEEEecC
Q 017757 107 DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKK-RQNGGPASIALMSS 173 (366)
Q Consensus 107 ~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~-~~~~~~g~iv~vsS 173 (366)
+.+...|++|..||..... ..+ -.+.++.|.. +++...+.+.+ ... .+.||.+|.
T Consensus 172 e~~kdaDiVVitAG~prkp---G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p--~~ivIVVsN 227 (444)
T PLN00112 172 EVFQDAEWALLIGAKPRGP---GME---RADLLDINGQ----IFAEQGKALNEVASR--NVKVIVVGN 227 (444)
T ss_pred HHhCcCCEEEECCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHHhcCC--CeEEEEcCC
Confidence 2334689999999974321 123 3445666654 45555555555 221 466777664
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.21 Score=47.08 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC--HHHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD--FDAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~--~~~v~~~~~~~~~id 113 (366)
.+++++|.|+++++|.+++......|++|+.+.+++++.+.+ +++ +.... .|..+ .+.+.++ . -+.+|
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~v---~~~~~~~~~~~~~~-~-~~~~d 215 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKL----GAKEV---IPREELQEESIKPL-E-KQRWA 215 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHc----CCCEE---EcchhHHHHHHHhh-c-cCCcC
Confidence 468999999999999999999999999999999988765544 222 22111 22222 2223222 1 24689
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++.+.|
T Consensus 216 ~vld~~g 222 (326)
T cd08289 216 GAVDPVG 222 (326)
T ss_pred EEEECCc
Confidence 9998876
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.12 Score=48.65 Aligned_cols=77 Identities=25% Similarity=0.297 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+ +++ +.+. ..|..+.+..+++.+.. ..+|
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~----g~~~---~~~~~~~~~~~~~~~~~~~~~~d 213 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL----GADV---AVDYTRPDWPDQVREALGGGGVT 213 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----CCCE---EEecCCccHHHHHHHHcCCCCce
Confidence 478999999999999999999999999999999887765543 322 2221 12334444444443332 3699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++++.|
T Consensus 214 ~vl~~~g 220 (324)
T cd08244 214 VVLDGVG 220 (324)
T ss_pred EEEECCC
Confidence 9999987
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.098 Score=47.34 Aligned_cols=37 Identities=22% Similarity=0.453 Sum_probs=34.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCe---EEEEecC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGAR---VSILARS 70 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~---V~l~~r~ 70 (366)
.++++++++|.|| |+.|+++++.|.+.|.+ +.+++|+
T Consensus 21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 4689999999997 99999999999999974 9999998
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.2 Score=48.48 Aligned_cols=74 Identities=22% Similarity=0.363 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|++++|.|+ |++|..++..+...|++|++++.+.++..+..+++ +.+.. .|..+.+.+.+.. +.+|++
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~----Ga~~v---i~~~~~~~~~~~~---~~~D~v 251 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL----GADSF---LVSTDPEKMKAAI---GTMDYI 251 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC----CCcEE---EcCCCHHHHHhhc---CCCCEE
Confidence 5889999775 89999999988889999988887766544443333 32211 2333444444432 368999
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
|.+.|
T Consensus 252 id~~g 256 (360)
T PLN02586 252 IDTVS 256 (360)
T ss_pred EECCC
Confidence 99988
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.78 Score=43.02 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=35.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA 77 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~ 77 (366)
++.+++|.|+++++|.+++......|++|++++++.++.+.+
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (325)
T cd05280 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL 187 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 356899999999999999988888899999999988765544
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.56 Score=45.33 Aligned_cols=114 Identities=17% Similarity=0.236 Sum_probs=71.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcC--CeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+++.|+|+ |.+|.++|..|+.+|. +++++|.+++.++..+.++..... .... +..+ .+. +....-|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy-------~~~~daD 107 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDY-------AVTAGSD 107 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCH-------HHhCCCC
Confidence 68999996 9999999999998874 699999998877766666654321 1121 1111 121 2234689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
++|.+||..... ..+.. +.+..| .-+++.+.+.+.+... .+.++++|-
T Consensus 108 iVVitAG~~~k~---g~tR~---dll~~N----~~I~~~i~~~I~~~~p--~~ivivvtN 155 (350)
T PLN02602 108 LCIVTAGARQIP---GESRL---NLLQRN----VALFRKIIPELAKYSP--DTILLIVSN 155 (350)
T ss_pred EEEECCCCCCCc---CCCHH---HHHHHH----HHHHHHHHHHHHHHCC--CeEEEEecC
Confidence 999999975332 12332 334444 4455666666665432 467777775
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.14 Score=43.58 Aligned_cols=71 Identities=24% Similarity=0.389 Sum_probs=44.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+..+.||+++|.|- |.+|+.+|+.|...|++|+++..++-++-++. +. |.++. + +++++. .
T Consensus 18 ~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~--~d---Gf~v~-------~---~~~a~~---~ 78 (162)
T PF00670_consen 18 NLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA--MD---GFEVM-------T---LEEALR---D 78 (162)
T ss_dssp -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH--HT---T-EEE-----------HHHHTT---T
T ss_pred ceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh--hc---CcEec-------C---HHHHHh---h
Confidence 56789999999995 89999999999999999999999885543322 21 33322 1 333333 6
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
.|++|.+.|-
T Consensus 79 adi~vtaTG~ 88 (162)
T PF00670_consen 79 ADIFVTATGN 88 (162)
T ss_dssp -SEEEE-SSS
T ss_pred CCEEEECCCC
Confidence 7999998884
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.98 Score=43.22 Aligned_cols=70 Identities=29% Similarity=0.259 Sum_probs=48.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
..+++|++.|.|. |-+|.++|+.|.+.|.+|++..|+..+..+..++. +.. .. ++.++++ .-
T Consensus 13 ~~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~----G~~-------~~---s~~eaa~---~A 74 (330)
T PRK05479 13 SLIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEAD----GFE-------VL---TVAEAAK---WA 74 (330)
T ss_pred hhhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHC----CCe-------eC---CHHHHHh---cC
Confidence 4578999999995 68999999999999999988877655433322211 221 11 3445555 56
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|+|+.+.-
T Consensus 75 DVVvLaVP 82 (330)
T PRK05479 75 DVIMILLP 82 (330)
T ss_pred CEEEEcCC
Confidence 99988874
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.0089 Score=47.05 Aligned_cols=38 Identities=21% Similarity=0.442 Sum_probs=33.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
.+++||.+||+|| |.+|..=++.|.+.|++|++++...
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 5789999999997 9999999999999999999999986
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.22 Score=49.10 Aligned_cols=83 Identities=19% Similarity=0.226 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHHHHhc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~---~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
.|.+++|.||+|++|..++..+...|+ +|+++++++++++.+.+.+.... +... ...|..+.+++.+.+.+.
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~--~~i~~~~~~~~~~~v~~~ 252 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIEL--LYVNPATIDDLHATLMEL 252 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceE--EEECCCccccHHHHHHHH
Confidence 478999999999999998876666554 79999999888776544221100 1111 122433323333333332
Q ss_pred ---CCCcEEEEcCC
Q 017757 110 ---GPVDVLVVNQG 120 (366)
Q Consensus 110 ---~~id~vi~nAG 120 (366)
..+|++|.+.|
T Consensus 253 t~g~g~D~vid~~g 266 (410)
T cd08238 253 TGGQGFDDVFVFVP 266 (410)
T ss_pred hCCCCCCEEEEcCC
Confidence 36899999887
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.21 Score=47.17 Aligned_cols=114 Identities=18% Similarity=0.257 Sum_probs=71.5
Q ss_pred EEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcCC--eEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 40 VFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATGI--EVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~--~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+.|.|+ |++|.++|..|+.+| .+++++|++.++++....++...... ......+ .+ .+.+...|++
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~-------~~~l~~aDiV 70 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD-------YADAADADIV 70 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC-------HHHhCCCCEE
Confidence 357886 679999999999998 67999999998888777777653221 1111111 11 1233468999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
|.+||..... ..+. ...+..| .-+++.+.+.+++... .+.++++|.-.
T Consensus 71 Iitag~p~~~---~~~R---~~l~~~n----~~i~~~~~~~i~~~~p--~~~viv~sNP~ 118 (300)
T cd00300 71 VITAGAPRKP---GETR---LDLINRN----APILRSVITNLKKYGP--DAIILVVSNPV 118 (300)
T ss_pred EEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHHHhCC--CeEEEEccChH
Confidence 9999975331 1232 2333344 4455666666666542 56777777533
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.19 Score=49.45 Aligned_cols=42 Identities=24% Similarity=0.267 Sum_probs=37.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+.||+++|.| .|.||+.+|+.+...|++|+++++++.+..
T Consensus 191 ~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~ 232 (406)
T TIGR00936 191 LLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRAL 232 (406)
T ss_pred CCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHH
Confidence 458999999999 488999999999999999999999886543
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.053 Score=45.57 Aligned_cols=43 Identities=30% Similarity=0.459 Sum_probs=36.3
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA 84 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~ 84 (366)
|+++|+++-+|+++|..|+++|.+|+.. +.+..+.+..++...
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~~ 43 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPEE 43 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCHH
Confidence 5789999999999999999999999988 566677777666543
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.1 Score=48.69 Aligned_cols=40 Identities=35% Similarity=0.393 Sum_probs=35.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
..+++||+++|.|.+.-+|+-+|..|.++|+.|+++....
T Consensus 152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t 191 (285)
T PRK14191 152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT 191 (285)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence 3589999999999999999999999999999999886544
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.072 Score=46.40 Aligned_cols=44 Identities=30% Similarity=0.454 Sum_probs=37.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHh
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL 83 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~ 83 (366)
++.|.|+ |-+|+.+|..++..|++|++.+++++.+++..+.++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~ 44 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER 44 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence 4678887 9999999999999999999999999988887777654
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.34 Score=46.25 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=36.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHH
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI 81 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l 81 (366)
+++.|.|+ |-+|..+|..|+..|++|++.+++++.++...+.+
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i 50 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANV 50 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence 56888885 88999999999999999999999988776655544
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.15 Score=50.84 Aligned_cols=79 Identities=16% Similarity=0.233 Sum_probs=52.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.+.+|+++|+|.+ ++|.++|+.|+++|++|++.+.+.... ..++++.. ...+.+...+.. .. .. ...|
T Consensus 2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~-~~gi~~~~g~~~-~~----~~---~~~d 69 (445)
T PRK04308 2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKM-FDGLVFYTGRLK-DA----LD---NGFD 69 (445)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhc-cCCcEEEeCCCC-HH----HH---hCCC
Confidence 4678999999975 999999999999999999998765431 12223221 112333332211 11 12 2579
Q ss_pred EEEEcCCCCCC
Q 017757 114 VLVVNQGVFVP 124 (366)
Q Consensus 114 ~vi~nAG~~~~ 124 (366)
.||...|+...
T Consensus 70 ~vv~spgi~~~ 80 (445)
T PRK04308 70 ILALSPGISER 80 (445)
T ss_pred EEEECCCCCCC
Confidence 99999998643
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.23 Score=43.90 Aligned_cols=85 Identities=12% Similarity=0.245 Sum_probs=55.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCch---------------------hHHHHHHHHHhhc-CCe
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGK---------------------KLEEAKQSIQLAT-GIE 88 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~---------------------~~~~~~~~l~~~~-~~~ 88 (366)
...+++.+++|.|+ ||+|.++++.|+..|.. ++++|.+.- +.+.+.+.+++.. ..+
T Consensus 14 q~~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~ 92 (198)
T cd01485 14 QNKLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVK 92 (198)
T ss_pred HHHHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCE
Confidence 34678899999986 56999999999999976 888876521 2233344444432 345
Q ss_pred EEEEEecCCC-HHHHHHHHHhcCCCcEEEEcCC
Q 017757 89 VATYSADVRD-FDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 89 v~~~~~Dls~-~~~v~~~~~~~~~id~vi~nAG 120 (366)
+..+..++.+ .+...++++ ..|++|.+..
T Consensus 93 i~~~~~~~~~~~~~~~~~~~---~~dvVi~~~d 122 (198)
T cd01485 93 LSIVEEDSLSNDSNIEEYLQ---KFTLVIATEE 122 (198)
T ss_pred EEEEecccccchhhHHHHHh---CCCEEEECCC
Confidence 6666655543 344555555 5788887643
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.15 Score=49.39 Aligned_cols=77 Identities=25% Similarity=0.297 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~--~~ 111 (366)
.|.+++|+|+ |++|..++..+...|+ +|+.+++++++++.+ +++ +.+. ..|..+ .+++.+.+.+. +.
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~----Ga~~---~i~~~~~~~~~~~~v~~~~~~g 255 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL----GATD---CVNPNDYDKPIQEVIVEITDGG 255 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh----CCCe---EEcccccchhHHHHHHHHhCCC
Confidence 4889999985 8999999988888898 799999988776654 223 3221 123332 22233322221 36
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 256 ~d~vid~~G~ 265 (368)
T TIGR02818 256 VDYSFECIGN 265 (368)
T ss_pred CCEEEECCCC
Confidence 9999999983
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.21 Score=48.42 Aligned_cols=76 Identities=26% Similarity=0.350 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id 113 (366)
.|++++|+|+ |++|..++..+...|+ +|+++++++++++.+ +++ +.+. ..|..+++..+++.+.. +.+|
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~----Ga~~---~i~~~~~~~~~~i~~~~~~g~d 261 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL----GATA---TVNAGDPNAVEQVRELTGGGVD 261 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc----CCce---EeCCCchhHHHHHHHHhCCCCC
Confidence 5889999985 8999998888888899 599999888776544 322 3221 22333333333333221 3699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++|.+.|
T Consensus 262 ~vid~~G 268 (371)
T cd08281 262 YAFEMAG 268 (371)
T ss_pred EEEECCC
Confidence 9999988
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.98 Score=42.85 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=72.0
Q ss_pred EEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcC----CeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 40 VFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATG----IEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~----~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+.|.|+ |.+|..+|..|+.+|. +++++|.+++.++....++..... .++.....| .+.....|
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~----------y~~~~~aD 70 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD----------YDDCADAD 70 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC----------HHHhCCCC
Confidence 678897 9999999999999875 699999998877766666654321 133333322 23334689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
++|..||..... ..+.+ -.+.++.| ..+++.+.+.+.+... .+.++.+|-
T Consensus 71 ivvitaG~~~kp---g~tr~-R~dll~~N----~~I~~~i~~~i~~~~p--~~i~ivvsN 120 (307)
T cd05290 71 IIVITAGPSIDP---GNTDD-RLDLAQTN----AKIIREIMGNITKVTK--EAVIILITN 120 (307)
T ss_pred EEEECCCCCCCC---CCCch-HHHHHHHH----HHHHHHHHHHHHHhCC--CeEEEEecC
Confidence 999999975321 12211 12344444 4566777777776652 455555554
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.14 Score=48.12 Aligned_cols=77 Identities=19% Similarity=0.268 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
+|.+++|.|+++++|.+++......|++++.+.++.++.+.+.+ + +.+. . .|-.+.+..+++.+.. .++|
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~----g~~~-~--~~~~~~~~~~~i~~~~~~~~~d 210 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L----GIGP-V--VSTEQPGWQDKVREAAGGAPIS 210 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c----CCCE-E--EcCCCchHHHHHHHHhCCCCCc
Confidence 58899999999999999999999999999999887776554432 2 3221 1 1223322223332222 3699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++.+.|
T Consensus 211 ~v~d~~g 217 (324)
T cd08292 211 VALDSVG 217 (324)
T ss_pred EEEECCC
Confidence 9999987
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.19 Score=47.01 Aligned_cols=76 Identities=25% Similarity=0.341 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+|.+++|.|+++++|.++++.....|++|+.+.+++++.+.+ .++ +.+... ..+-...+.+.+. -+++|.+
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~~~-~~~~~~~~~i~~~---~~~~d~v 212 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL----GADEVV-IDDGAIAEQLRAA---PGGFDKV 212 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc----CCcEEE-ecCccHHHHHHHh---CCCceEE
Confidence 578999999999999999999999999999998887665443 222 322111 1111112233333 2469999
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
+++.|
T Consensus 213 l~~~~ 217 (320)
T cd08243 213 LELVG 217 (320)
T ss_pred EECCC
Confidence 99887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.13 Score=45.12 Aligned_cols=41 Identities=27% Similarity=0.300 Sum_probs=37.1
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
...+++||.++|.|-|.-+|+-++..|.++|+.|++++.+.
T Consensus 56 ~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~ 96 (197)
T cd01079 56 YGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDING 96 (197)
T ss_pred cCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCc
Confidence 34589999999999999999999999999999999997554
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.11 Score=48.43 Aligned_cols=43 Identities=23% Similarity=0.296 Sum_probs=37.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~ 74 (366)
..+++||+++|.|.|.-+|+-++..|.++|+.|++++.....+
T Consensus 159 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l 201 (287)
T PRK14176 159 GVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDL 201 (287)
T ss_pred CCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCH
Confidence 3589999999999999999999999999999999988655443
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.1 Score=48.79 Aligned_cols=42 Identities=26% Similarity=0.439 Sum_probs=36.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
..+++||+++|.|.|.-+|+-++..|.++|+.|+++.+....
T Consensus 153 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~ 194 (285)
T PRK14189 153 GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRD 194 (285)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCC
Confidence 358999999999999999999999999999999987665433
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.3 Score=47.68 Aligned_cols=74 Identities=23% Similarity=0.359 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|++++|.|+ |++|..++......|++|++++++.++..+..+++ +.+.. .|..+.+.+.+.. +.+|++
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l----Ga~~~---i~~~~~~~v~~~~---~~~D~v 246 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL----GADSF---LVTTDSQKMKEAV---GTMDFI 246 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC----CCcEE---EcCcCHHHHHHhh---CCCcEE
Confidence 5899999986 89999999988889999999888765433333332 32211 2333334444432 468999
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
+.+.|
T Consensus 247 id~~G 251 (375)
T PLN02178 247 IDTVS 251 (375)
T ss_pred EECCC
Confidence 99987
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.078 Score=47.65 Aligned_cols=43 Identities=33% Similarity=0.429 Sum_probs=37.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHH
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI 81 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l 81 (366)
++.|+||+|.+|.++++.|++.|++|++.+|++++.++..+..
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~ 44 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA 44 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence 4889999999999999999999999999999988877765543
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.2 Score=44.35 Aligned_cols=85 Identities=15% Similarity=0.320 Sum_probs=56.7
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCc-------------------hhHHHHHHHHHhhcC-Ce
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG-------------------KKLEEAKQSIQLATG-IE 88 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~ 88 (366)
.....+++++++|.|+ ||+|.++++.|+..|.. +.++|.+. .+.+.+++.+++..+ .+
T Consensus 14 e~Q~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~ 92 (197)
T cd01492 14 EAQKRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVK 92 (197)
T ss_pred HHHHHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCE
Confidence 3456788999999985 67999999999999975 88887552 234444555555432 35
Q ss_pred EEEEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 89 VATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 89 v~~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
+..+...+++ ...++++ ..|++|.+..
T Consensus 93 i~~~~~~~~~--~~~~~~~---~~dvVi~~~~ 119 (197)
T cd01492 93 VSVDTDDISE--KPEEFFS---QFDVVVATEL 119 (197)
T ss_pred EEEEecCccc--cHHHHHh---CCCEEEECCC
Confidence 5555555542 2344444 6799887753
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.088 Score=51.48 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=64.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+-+.+++.|.||||.+|+++.+.|.++ +.+|..+.++....+...+... .....|+.+.++++.. .+...
T Consensus 35 ~~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~-------~l~~~~~~~~~~~~~~--~~~~~ 105 (381)
T PLN02968 35 SEEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFP-------HLITQDLPNLVAVKDA--DFSDV 105 (381)
T ss_pred cccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCc-------cccCccccceecCCHH--HhcCC
Confidence 345668999999999999999999999 7788888876544322221111 1112233333333322 12368
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
|+++.+.+.. ..+.+.+.+.+ ..+||-.|+..-
T Consensus 106 DvVf~Alp~~--------------------------~s~~i~~~~~~-----g~~VIDlSs~fR 138 (381)
T PLN02968 106 DAVFCCLPHG--------------------------TTQEIIKALPK-----DLKIVDLSADFR 138 (381)
T ss_pred CEEEEcCCHH--------------------------HHHHHHHHHhC-----CCEEEEcCchhc
Confidence 9999988621 45566666632 357888887553
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.16 Score=48.50 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=37.3
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
....+++||++-|.| .|.||+++|+.+..-|++|+..+|++.
T Consensus 139 ~~~~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~ 180 (324)
T COG1052 139 LLGFDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN 180 (324)
T ss_pred ccccCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 344579999999999 699999999999988999999999875
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.28 Score=47.35 Aligned_cols=76 Identities=25% Similarity=0.286 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|++++|.|+ |++|..++..+...|++ |+.++++.++.+.+ +++ +.+. ..|..+.+..+++.+.. ..+
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~----Ga~~---~i~~~~~~~~~~i~~~~~~~g~ 246 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF----GATH---TVNSSGTDPVEAIRALTGGFGA 246 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc----CCce---EEcCCCcCHHHHHHHHhCCCCC
Confidence 5889999985 99999999888888985 88998888776554 222 3221 12333333333333322 258
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|+++.+.|
T Consensus 247 d~vid~~g 254 (358)
T TIGR03451 247 DVVIDAVG 254 (358)
T ss_pred CEEEECCC
Confidence 99999998
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.21 Score=47.36 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=67.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++.|+|++|.+|.++|..|+.+| .+++++|.+ +++-..-++..... .++.... ..++ ..+.+...|++
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~----~~~~---~y~~~~daDiv 72 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL----GPEE---LKKALKGADVV 72 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec----CCCc---hHHhcCCCCEE
Confidence 57899999999999999999988 479999998 33332333332211 1121110 0011 22334478999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
|.+||..... ..+ -.+.++.|..-.- .+.+.+.+... .+.++++|.-.
T Consensus 73 vitaG~~~k~---g~t---R~dll~~N~~i~~----~i~~~i~~~~p--~a~vivvtNPv 120 (310)
T cd01337 73 VIPAGVPRKP---GMT---RDDLFNINAGIVR----DLATAVAKACP--KALILIISNPV 120 (310)
T ss_pred EEeCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHHhCC--CeEEEEccCch
Confidence 9999975321 122 3445666665444 44444444331 46777777643
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.4 Score=45.97 Aligned_cols=76 Identities=24% Similarity=0.311 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|++++|+|+ +++|..+++.+...|+ +|++++++.++.+.+ .++ +.+. ..|..+.+..+++.+.. +.+
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~----ga~~---~i~~~~~~~~~~l~~~~~~~~~ 242 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL----GATI---VLDPTEVDVVAEVRKLTGGGGV 242 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh----CCCE---EECCCccCHHHHHHHHhCCCCC
Confidence 5889999985 8999999999999999 788888887765544 222 3222 12333333333333322 359
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|+++.+.|
T Consensus 243 d~vid~~g 250 (351)
T cd08233 243 DVSFDCAG 250 (351)
T ss_pred CEEEECCC
Confidence 99999997
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.18 Score=48.94 Aligned_cols=76 Identities=26% Similarity=0.336 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH-HHHHHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF-DAVKTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~-~~v~~~~~~~--~~ 111 (366)
.|.+++|.|+ |++|..++..+...|+ +|+.++++.++++.+ +++ +.+. ..|..+. +++.+.+.+. +.
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l----Ga~~---~i~~~~~~~~~~~~v~~~~~~g 256 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF----GATD---CVNPKDHDKPIQQVLVEMTDGG 256 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc----CCCE---EEcccccchHHHHHHHHHhCCC
Confidence 5899999985 8999999999989999 699999998876644 232 3222 1233332 2343433332 46
Q ss_pred CcEEEEcCC
Q 017757 112 VDVLVVNQG 120 (366)
Q Consensus 112 id~vi~nAG 120 (366)
+|+++.+.|
T Consensus 257 ~d~vid~~g 265 (368)
T cd08300 257 VDYTFECIG 265 (368)
T ss_pred CcEEEECCC
Confidence 999999988
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.18 Score=47.01 Aligned_cols=77 Identities=32% Similarity=0.394 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
+|.+++|+|+++++|.+++..+...|++|+.++++.++.+.+. ++ +... .+ +..+.+..+++.+.. +.+|
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~~-~~--~~~~~~~~~~i~~~~~~~~~d 210 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-AL----GADH-VI--DYRDPDLRERVKALTGGRGVD 210 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-Hc----CCce-ee--ecCCccHHHHHHHHcCCCCcE
Confidence 6889999999999999999999999999999998876655432 22 2211 11 222222222222221 3699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
.++++.|
T Consensus 211 ~v~~~~g 217 (323)
T cd08241 211 VVYDPVG 217 (323)
T ss_pred EEEECcc
Confidence 9999987
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.22 Score=47.29 Aligned_cols=78 Identities=21% Similarity=0.348 Sum_probs=52.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCc-------------------hhHHHHHHHHHhhc-CCeEEEEEecCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGAR-VSILARSG-------------------KKLEEAKQSIQLAT-GIEVATYSADVR 97 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~~~~~Dls 97 (366)
+++|.|+ ||+|.++++.|+..|.. +.++|.+. .+.+.+++.+++.. ..++..+..+++
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 3788885 99999999999999974 88887542 23444444554432 356777777777
Q ss_pred CHHHHHHHHHhcCCCcEEEEcCC
Q 017757 98 DFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 98 ~~~~v~~~~~~~~~id~vi~nAG 120 (366)
+.+...++++ ..|+||.+..
T Consensus 80 ~~~~~~~f~~---~~DvVv~a~D 99 (312)
T cd01489 80 DPDFNVEFFK---QFDLVFNALD 99 (312)
T ss_pred CccchHHHHh---cCCEEEECCC
Confidence 6433344554 6788887763
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.95 Score=41.97 Aligned_cols=75 Identities=29% Similarity=0.316 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH-HHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF-DAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~-~~v~~~~~~~~~id 113 (366)
.|++++|.|+ |++|..++..+...|++ |+++++++++.+.+ +++ +.+.. .|..+. +.+.++.. -..+|
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a-~~~----Ga~~~---i~~~~~~~~~~~~~~-~~g~d 189 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA-LSF----GATAL---AEPEVLAERQGGLQN-GRGVD 189 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc----CCcEe---cCchhhHHHHHHHhC-CCCCC
Confidence 6899999986 89999999888888997 88888877665433 222 32211 122221 11222111 13689
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++.+.|
T Consensus 190 ~vid~~G 196 (280)
T TIGR03366 190 VALEFSG 196 (280)
T ss_pred EEEECCC
Confidence 9999988
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.12 Score=48.11 Aligned_cols=42 Identities=26% Similarity=0.313 Sum_probs=36.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
..+++||+++|.|.|.-+|+-++..|.++|+.|+++......
T Consensus 152 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~ 193 (281)
T PRK14183 152 EIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKD 193 (281)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcC
Confidence 358999999999999999999999999999999987654433
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.13 Score=48.13 Aligned_cols=44 Identities=27% Similarity=0.419 Sum_probs=38.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+++||+++|.|.|.-+|+-++..|.++|+.|+++.+....++
T Consensus 150 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~ 193 (287)
T PRK14173 150 GIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP 193 (287)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 45899999999999999999999999999999998876554433
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.15 Score=48.79 Aligned_cols=115 Identities=15% Similarity=0.094 Sum_probs=67.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCch--hHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHH
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-------RVSILARSGK--KLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~~--~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~ 105 (366)
+++.|+|++|.+|..+|..|+..|. +++++|.++. +++..+.++.... ..++.. +. .-
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~~-----~~ 74 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----TD-----DP 74 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----ec-----Ch
Confidence 4789999999999999999998764 7999999643 2333333333211 011111 10 11
Q ss_pred HHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 106 LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 106 ~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
.+.+..-|++|.+||..... -++-.+.++.|. -+++.+.+.+.+... ..+.++.+|.
T Consensus 75 y~~~~daDiVVitaG~~~k~------g~tR~dll~~Na----~i~~~i~~~i~~~~~-~~~iiivvsN 131 (326)
T PRK05442 75 NVAFKDADVALLVGARPRGP------GMERKDLLEANG----AIFTAQGKALNEVAA-RDVKVLVVGN 131 (326)
T ss_pred HHHhCCCCEEEEeCCCCCCC------CCcHHHHHHHHH----HHHHHHHHHHHHhCC-CCeEEEEeCC
Confidence 23344789999999974321 122344555555 455666666666321 1467777764
|
|
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.19 Score=37.99 Aligned_cols=36 Identities=28% Similarity=0.495 Sum_probs=32.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEec
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILAR 69 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r 69 (366)
.++++|+++|.|+ |+.|+.++..|.+. +.+|.+.+|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 6689999999998 99999999999998 567888777
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.15 Score=48.00 Aligned_cols=79 Identities=19% Similarity=0.176 Sum_probs=54.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.+++||+++|.|-++-+|+.+|..|.++|+.|+++. |+.+ +++..+ +...+.+-+.+++.++..+- +
T Consensus 154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~--------~ADIVIsavg~~~~v~~~~l---k 221 (296)
T PRK14188 154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCR--------RADILVAAVGRPEMVKGDWI---K 221 (296)
T ss_pred CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHh--------cCCEEEEecCChhhcchhee---c
Confidence 479999999999999999999999999999999995 6643 333221 12234444566665555432 3
Q ss_pred CcEEEEcCCCCC
Q 017757 112 VDVLVVNQGVFV 123 (366)
Q Consensus 112 id~vi~nAG~~~ 123 (366)
...+|-..|+..
T Consensus 222 ~GavVIDvGin~ 233 (296)
T PRK14188 222 PGATVIDVGINR 233 (296)
T ss_pred CCCEEEEcCCcc
Confidence 455566666643
|
|
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.14 Score=50.10 Aligned_cols=39 Identities=18% Similarity=0.086 Sum_probs=34.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHH-HCCCeEEEEecCch
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAA-KEGARVSILARSGK 72 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~-~~G~~V~l~~r~~~ 72 (366)
..+.||++.|.| .|.||+++|+.+. .-|++|+..++...
T Consensus 161 ~~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~~ 200 (386)
T PLN02306 161 NLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQS 200 (386)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence 468999999999 6999999999986 77999999998754
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.74 Score=43.67 Aligned_cols=112 Identities=19% Similarity=0.247 Sum_probs=68.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcC--CeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++.|.|+ |.+|..+|..|+.+| .+|++++++.++.+.....+..... ....... .+.+ .+...|+
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~l~~aDi 70 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------DCKGADV 70 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------HhCCCCE
Confidence 4788997 899999999999999 5899999998776644444432111 1111111 2221 2447899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
+|.++|..... ..+. .+.+.. ..-+.+.+.+.+++... .+.++.++.
T Consensus 71 Viita~~~~~~---~~~r---~dl~~~----n~~i~~~~~~~l~~~~~--~giiiv~tN 117 (308)
T cd05292 71 VVITAGANQKP---GETR---LDLLKR----NVAIFKEIIPQILKYAP--DAILLVVTN 117 (308)
T ss_pred EEEccCCCCCC---CCCH---HHHHHH----HHHHHHHHHHHHHHHCC--CeEEEEecC
Confidence 99999975321 1122 223333 34455566666555442 467777764
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.47 Score=44.86 Aligned_cols=115 Identities=21% Similarity=0.274 Sum_probs=67.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+++.|+|+ |-+|..+|..++..|. +|++++++++.++....++.... +.... +.. -+|. + .+...|
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~---~----~~~~aD 72 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDY---E----DIAGSD 72 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCH---H----HHCCCC
Confidence 57899998 8899999999999875 89999998877654443333221 11111 111 1222 1 223689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
++|.++|..... ..+. .+.+.-| .-+.+.+.+.+.+... .+.+++++.-
T Consensus 73 iVii~~~~p~~~---~~~r---~~~~~~n----~~i~~~i~~~i~~~~~--~~~viv~tNP 121 (307)
T PRK06223 73 VVVITAGVPRKP---GMSR---DDLLGIN----AKIMKDVAEGIKKYAP--DAIVIVVTNP 121 (307)
T ss_pred EEEECCCCCCCc---CCCH---HHHHHHH----HHHHHHHHHHHHHHCC--CeEEEEecCc
Confidence 999999965321 1122 2233333 3555566666655432 4566666543
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.21 Score=40.32 Aligned_cols=90 Identities=30% Similarity=0.370 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcEEEEcCCCCCCC
Q 017757 48 GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVLVVNQGVFVPG 125 (366)
Q Consensus 48 gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~vi~nAG~~~~~ 125 (366)
|||...+.-+...|++|+++++++++.+.+. ++ +... ..|-++.+-.+++.+-. .++|++|.|+|.
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~----Ga~~---~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~---- 68 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-EL----GADH---VIDYSDDDFVEQIRELTGGRGVDVVIDCVGS---- 68 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HT----TESE---EEETTTSSHHHHHHHHTTTSSEEEEEESSSS----
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hh----cccc---cccccccccccccccccccccceEEEEecCc----
Confidence 6899999999999999999999988765543 22 3222 23444444333333333 369999999982
Q ss_pred CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 126 ELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 126 ~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
.+ ..+.....+++ .|+++.++...
T Consensus 69 ------~~---------------~~~~~~~~l~~-----~G~~v~vg~~~ 92 (130)
T PF00107_consen 69 ------GD---------------TLQEAIKLLRP-----GGRIVVVGVYG 92 (130)
T ss_dssp ------HH---------------HHHHHHHHEEE-----EEEEEEESSTS
T ss_pred ------HH---------------HHHHHHHHhcc-----CCEEEEEEccC
Confidence 22 22344455555 57999998865
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.26 Score=46.77 Aligned_cols=73 Identities=22% Similarity=0.348 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.+.+++|.|+++.+|.++++.+...|++|+.++++.++.+.+ +++ .. .+ +..+ +..+-+.+.+.+|++
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~-~~~-~~---~~--~~~~-----~~~~~v~~~~~~d~~ 229 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV-SKY-AD---YV--IVGS-----KFSEEVKKIGGADIV 229 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHH-HH---Hh--cCch-----hHHHHHHhcCCCcEE
Confidence 578999999999999999999999999999999987776554 333 10 11 1111 112222223468999
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
+.+.|
T Consensus 230 ld~~g 234 (334)
T PRK13771 230 IETVG 234 (334)
T ss_pred EEcCC
Confidence 99877
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.14 Score=47.67 Aligned_cols=44 Identities=30% Similarity=0.403 Sum_probs=38.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+++||.++|.|-|.-+|+-++..|.++|+.|+++++....++
T Consensus 153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~ 196 (278)
T PRK14172 153 NIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLK 196 (278)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 35899999999999999999999999999999999876554443
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.14 Score=47.71 Aligned_cols=44 Identities=18% Similarity=0.286 Sum_probs=38.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+++||+++|.|-|.-+|+-++..|.++|+.|++++.....++
T Consensus 154 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~ 197 (284)
T PRK14177 154 GIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP 197 (284)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 45899999999999999999999999999999999876555443
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.21 Score=48.66 Aligned_cols=77 Identities=29% Similarity=0.349 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH-HHHHHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF-DAVKTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~-~~v~~~~~~~--~~ 111 (366)
.|++++|.|+ |++|..++..+...|+ +|+++++++++++.+. ++ +.+. ..|..+. +++.+.+.+. +.
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~----Ga~~---~i~~~~~~~~~~~~v~~~~~~g 268 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM----GITD---FINPKDSDKPVHERIREMTGGG 268 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc----CCcE---EEecccccchHHHHHHHHhCCC
Confidence 5899999985 9999999998888999 5999999887766553 22 3222 1233332 1233333322 26
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|+++.++|.
T Consensus 269 ~dvvid~~G~ 278 (381)
T PLN02740 269 VDYSFECAGN 278 (381)
T ss_pred CCEEEECCCC
Confidence 9999999983
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.2 Score=46.44 Aligned_cols=77 Identities=29% Similarity=0.325 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
+|++++|.|+++++|.++++.....|++|+.++++.++.+.+ .++ +.+-. + +..+.+..+.+.+.. ..+|
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~~-~--~~~~~~~~~~~~~~~~~~~~d 207 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAA----GADHV-I--NYRDEDFVERVREITGGRGVD 207 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHC----CCCEE-E--eCCchhHHHHHHHHcCCCCee
Confidence 589999999999999999999999999999998887765544 222 32211 1 222223223333322 3699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
.++++.|
T Consensus 208 ~vl~~~~ 214 (320)
T cd05286 208 VVYDGVG 214 (320)
T ss_pred EEEECCC
Confidence 9999876
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.15 Score=47.52 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=38.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+++||.++|.|.|.-+|+-++..|.++|+.|+++.+....+.
T Consensus 153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~ 196 (282)
T PRK14180 153 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK 196 (282)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHH
Confidence 45799999999999999999999999999999999877654443
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.17 Score=47.25 Aligned_cols=40 Identities=28% Similarity=0.379 Sum_probs=36.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
.+++||+++|.|.|.-+|+-++..|.++|+.|+++.....
T Consensus 154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~ 193 (284)
T PRK14190 154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK 193 (284)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch
Confidence 5799999999999999999999999999999998865443
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.22 Score=47.33 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH--HHHHHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF--DAVKTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~--~~v~~~~~~~--~~ 111 (366)
+|++++|.|+++++|.++++.+...|++|+.+.++.+..++..+.+... +....+ +-.+. .+..+.+.+. +.
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~-g~~~~~---~~~~~~~~~~~~~i~~~~~~~ 221 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKAL-GADHVL---TEEELRSLLATELLKSAPGGR 221 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhc-CCCEEE---eCcccccccHHHHHHHHcCCC
Confidence 5899999999999999999999999999988887654222222223222 322211 11111 0222333322 26
Q ss_pred CcEEEEcCC
Q 017757 112 VDVLVVNQG 120 (366)
Q Consensus 112 id~vi~nAG 120 (366)
+|.++.+.|
T Consensus 222 ~d~vld~~g 230 (341)
T cd08290 222 PKLALNCVG 230 (341)
T ss_pred ceEEEECcC
Confidence 899999987
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.14 Score=52.72 Aligned_cols=73 Identities=12% Similarity=0.235 Sum_probs=56.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
..++|.| .|.+|++++++|.++|.+++++++|+++.++..+ .....+..|.+|++.++++- ..+.|.++-
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-------~g~~~i~GD~~~~~~L~~a~--i~~a~~viv 487 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-------RGIRAVLGNAANEEIMQLAH--LDCARWLLL 487 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-------CCCeEEEcCCCCHHHHHhcC--ccccCEEEE
Confidence 4567777 4889999999999999999999999887666542 14667899999988877642 236787766
Q ss_pred cCC
Q 017757 118 NQG 120 (366)
Q Consensus 118 nAG 120 (366)
..+
T Consensus 488 ~~~ 490 (558)
T PRK10669 488 TIP 490 (558)
T ss_pred EcC
Confidence 654
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.32 E-value=1 Score=40.39 Aligned_cols=76 Identities=30% Similarity=0.354 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++..+|-.|++.|. ++..+++.|. +|+.++.++..++.+.+.+... +.++.++..|+.+. +. -+.+|.
T Consensus 36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~-~~~~~~~~~d~~~~------~~-~~~fD~ 104 (223)
T PRK14967 36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLA-GVDVDVRRGDWARA------VE-FRPFDV 104 (223)
T ss_pred CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHh-CCeeEEEECchhhh------cc-CCCeeE
Confidence 46789999976654 3444555565 8999999998777666555433 44677777776542 11 247899
Q ss_pred EEEcCCCC
Q 017757 115 LVVNQGVF 122 (366)
Q Consensus 115 vi~nAG~~ 122 (366)
++.|..+.
T Consensus 105 Vi~npPy~ 112 (223)
T PRK14967 105 VVSNPPYV 112 (223)
T ss_pred EEECCCCC
Confidence 99998654
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.59 Score=41.87 Aligned_cols=78 Identities=19% Similarity=0.192 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh------------cCCeEEEEEecCCCHHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA------------TGIEVATYSADVRDFDAVK 103 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~------------~~~~v~~~~~Dls~~~~v~ 103 (366)
.+.++|+.|++.| .=|..|+++|++|+.++.++..++.+.++-... .+.++.++.+|+.+.+.
T Consensus 34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-- 108 (213)
T TIGR03840 34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA-- 108 (213)
T ss_pred CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence 5679999998766 456778999999999999998888654322110 13468888999877542
Q ss_pred HHHHhcCCCcEEEEcCCC
Q 017757 104 TALDEAGPVDVLVVNQGV 121 (366)
Q Consensus 104 ~~~~~~~~id~vi~nAG~ 121 (366)
+..++.|.++-.+-.
T Consensus 109 ---~~~~~fD~i~D~~~~ 123 (213)
T TIGR03840 109 ---ADLGPVDAVYDRAAL 123 (213)
T ss_pred ---ccCCCcCEEEechhh
Confidence 112356877776544
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.56 Score=45.86 Aligned_cols=115 Identities=12% Similarity=0.071 Sum_probs=69.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-e----EEE----EecCchhHHHHHHHHHhhc-C--CeEEEEEecCCCHHHHHHH
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-R----VSI----LARSGKKLEEAKQSIQLAT-G--IEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~----V~l----~~r~~~~~~~~~~~l~~~~-~--~~v~~~~~Dls~~~~v~~~ 105 (366)
-++.|+|++|.+|.++|..|+..|. . |.+ ++++.+.++..+-++.... . .++.. .. .+
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~------- 114 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DP------- 114 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CC-------
Confidence 4689999999999999999999874 2 344 4888888877766665432 1 12211 11 11
Q ss_pred HHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 106 LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 106 ~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
.+.+...|++|..||..... ..+ -.+.++.|.. +++.+.+.+.+... ..+.|+.+|.
T Consensus 115 y~~~kdaDIVVitAG~prkp---g~t---R~dll~~N~~----I~k~i~~~I~~~a~-~~~iviVVsN 171 (387)
T TIGR01757 115 YEVFEDADWALLIGAKPRGP---GME---RADLLDINGQ----IFADQGKALNAVAS-KNCKVLVVGN 171 (387)
T ss_pred HHHhCCCCEEEECCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHHhCC-CCeEEEEcCC
Confidence 22334689999999975321 122 3345566654 45555555555221 1466777764
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.3 Score=46.28 Aligned_cols=76 Identities=20% Similarity=0.264 Sum_probs=48.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDV 114 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~ 114 (366)
+++++++||++++|..++......|++|+.+++++++.+.+.+ + +.+.. .|..+.+..+++.+.. ..+|+
T Consensus 144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~----g~~~~---i~~~~~~~~~~v~~~~~~~~~d~ 215 (324)
T cd08291 144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I----GAEYV---LNSSDPDFLEDLKELIAKLNATI 215 (324)
T ss_pred CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c----CCcEE---EECCCccHHHHHHHHhCCCCCcE
Confidence 3455556999999999988777789999999998876555432 2 32221 1222322223332222 36999
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
++.+.|
T Consensus 216 vid~~g 221 (324)
T cd08291 216 FFDAVG 221 (324)
T ss_pred EEECCC
Confidence 999887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.26 Score=52.08 Aligned_cols=82 Identities=24% Similarity=0.274 Sum_probs=58.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCc------------------hhHHHHHHHHHhhc-CCeEE
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSG------------------KKLEEAKQSIQLAT-GIEVA 90 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~------------------~~~~~~~~~l~~~~-~~~v~ 90 (366)
...|++.+|+|.|. | +|..++..|+..|. +++++|.+. .|.+.+++.+.+.. ..++.
T Consensus 102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~ 179 (722)
T PRK07877 102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE 179 (722)
T ss_pred HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence 44688999999999 4 99999999999994 799987753 23444555555443 35778
Q ss_pred EEEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 91 TYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 91 ~~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
.+...++ ++.++++++ .+|+||.|.
T Consensus 180 ~~~~~i~-~~n~~~~l~---~~DlVvD~~ 204 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLD---GLDVVVEEC 204 (722)
T ss_pred EEeccCC-HHHHHHHhc---CCCEEEECC
Confidence 8887777 567777765 355555554
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.16 Score=47.75 Aligned_cols=44 Identities=25% Similarity=0.299 Sum_probs=38.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+++||.++|.|-|.-+|+-++..|.++|+.|+++......++
T Consensus 153 ~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~ 196 (297)
T PRK14186 153 QIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLA 196 (297)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 35899999999999999999999999999999998866554443
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.97 Score=42.52 Aligned_cols=102 Identities=19% Similarity=0.177 Sum_probs=70.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
.+.|.|| |-+|...|+-...-|++|++.++|.++++..-.. ++.++..+. +++..+++.+. +-|.+|..
T Consensus 170 kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~----f~~rv~~~~---st~~~iee~v~---~aDlvIga 238 (371)
T COG0686 170 KVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDL----FGGRVHTLY---STPSNIEEAVK---KADLVIGA 238 (371)
T ss_pred cEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHh----hCceeEEEE---cCHHHHHHHhh---hccEEEEE
Confidence 3445553 6789999999999999999999999988765443 355665554 77888888887 56888876
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
.=+.... .+-.+.+..+..|++ ...||=+.--.
T Consensus 239 VLIpgak-------------------aPkLvt~e~vk~Mkp-----GsVivDVAiDq 271 (371)
T COG0686 239 VLIPGAK-------------------APKLVTREMVKQMKP-----GSVIVDVAIDQ 271 (371)
T ss_pred EEecCCC-------------------CceehhHHHHHhcCC-----CcEEEEEEEcC
Confidence 5443221 344566777888876 34566565433
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.11 Score=48.39 Aligned_cols=44 Identities=25% Similarity=0.275 Sum_probs=37.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSI 81 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l 81 (366)
+++++|.|+ ||-+++++..|++.|+. |.++.|+.++.+++++.+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 578999995 99999999999999975 999999998887766543
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.53 Score=45.51 Aligned_cols=103 Identities=26% Similarity=0.350 Sum_probs=66.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-C-CCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-G-PVD 113 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~-~id 113 (366)
+.+++|+|+ |-||+..+..+...|+. |+++++++++++.+.+.. +..... +...++......+.. + ..|
T Consensus 169 ~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~----g~~~~~---~~~~~~~~~~~~~~t~g~g~D 240 (350)
T COG1063 169 GGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG----GADVVV---NPSEDDAGAEILELTGGRGAD 240 (350)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhC----CCeEee---cCccccHHHHHHHHhCCCCCC
Confidence 338999995 89999998888888865 778899999888765533 222211 111213333333332 2 699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~ 177 (366)
++|=++|... .++.++...++ .|++++++-....
T Consensus 241 ~vie~~G~~~-------------------------~~~~ai~~~r~-----gG~v~~vGv~~~~ 274 (350)
T COG1063 241 VVIEAVGSPP-------------------------ALDQALEALRP-----GGTVVVVGVYGGE 274 (350)
T ss_pred EEEECCCCHH-------------------------HHHHHHHHhcC-----CCEEEEEeccCCc
Confidence 9999999211 44455556655 6789888875443
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.52 Score=43.64 Aligned_cols=107 Identities=17% Similarity=0.190 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|+++|..|+++|.-...+.+......+|+.++.++..++.+.+......-.++.++..|+.+.. + .-+.+|++
T Consensus 77 ~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~-----~-~~~~fD~V 150 (272)
T PRK11873 77 PGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALP-----V-ADNSVDVI 150 (272)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCC-----C-CCCceeEE
Confidence 58899999988775443333333334579999999988887766554432246777777764321 1 12468999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEec
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMS 172 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vs 172 (366)
+.|....... +. -.+++.+.+.+++ .|++++..
T Consensus 151 i~~~v~~~~~-----d~--------------~~~l~~~~r~Lkp-----GG~l~i~~ 183 (272)
T PRK11873 151 ISNCVINLSP-----DK--------------ERVFKEAFRVLKP-----GGRFAISD 183 (272)
T ss_pred EEcCcccCCC-----CH--------------HHHHHHHHHHcCC-----CcEEEEEE
Confidence 8776442211 11 2345666777766 56777643
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.18 Score=47.07 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=37.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~ 74 (366)
..+++||+++|.|-|.-+|+-++..|.++|+.|+++......+
T Consensus 152 ~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l 194 (284)
T PRK14170 152 GTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDL 194 (284)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence 4689999999999999999999999999999999886655443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 366 | ||||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 7e-17 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 5e-12 | ||
| 1a27_A | 289 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C | 6e-12 | ||
| 3sx2_A | 278 | Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca | 6e-12 | ||
| 1fds_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C | 7e-12 | ||
| 1fdu_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M | 8e-12 | ||
| 1fdw_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M | 8e-12 | ||
| 3p19_A | 266 | Improved Nadph-Dependent Blue Fluorescent Protein L | 8e-12 | ||
| 1equ_A | 327 | Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin | 8e-12 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 2e-11 | ||
| 1iol_A | 327 | Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com | 3e-11 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 4e-11 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 4e-11 | ||
| 2yz7_A | 260 | X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F | 5e-11 | ||
| 3uwr_A | 286 | Crystal Structure Of Carveol Dehydrogenase From Myc | 1e-10 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 1e-10 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 2e-10 | ||
| 3tsc_A | 277 | Crystal Structure Of Short Chain Dehydrogenase Map_ | 3e-10 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 3e-10 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 3e-10 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 4e-10 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 4e-10 | ||
| 2zk7_A | 257 | Structure Of A C-Terminal Deletion Mutant Of Thermo | 4e-10 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 5e-10 | ||
| 2dtd_A | 264 | Structure Of Thermoplasma Acidophilum Aldohexose De | 5e-10 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 5e-10 | ||
| 1nxq_A | 251 | Crystal Structure Of R-Alcohol Dehydrogenase (Radh) | 5e-10 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 7e-10 | ||
| 1zjy_A | 251 | Structure Of R-Specific Alcohol Dehydrogenase (Muta | 8e-10 | ||
| 3sc4_A | 285 | Crystal Structure Of A Short Chain Dehydrogenase (A | 9e-10 | ||
| 1edo_A | 244 | The X-Ray Structure Of Beta-Keto Acyl Carrier Prote | 1e-09 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 1e-09 | ||
| 3l77_A | 235 | X-Ray Structure Alcohol Dehydrogenase From Archaeon | 1e-09 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 1e-09 | ||
| 3tn7_A | 257 | Crystal Structure Of Short-Chain Alcohol Dehydrogen | 2e-09 | ||
| 1bdb_A | 277 | Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From | 2e-09 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 2e-09 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 2e-09 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 3e-09 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 3e-09 | ||
| 2y93_A | 281 | Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2 | 4e-09 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 4e-09 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 4e-09 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 4e-09 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 4e-09 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 4e-09 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 4e-09 | ||
| 3t7c_A | 299 | Crystal Structure Of Carveol Dehydrogenase From Myc | 4e-09 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 5e-09 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 5e-09 | ||
| 3kvo_A | 346 | Crystal Structure Of The Catalytic Domain Of Human | 5e-09 | ||
| 1h5q_A | 265 | Mannitol Dehydrogenase From Agaricus Bisporus Lengt | 6e-09 | ||
| 3uve_A | 286 | Crystal Structure Of Carveol Dehydrogenase ((+)-Tra | 8e-09 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 9e-09 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 1e-08 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 1e-08 | ||
| 3tox_A | 280 | Crystal Structure Of A Short Chain Dehydrogenase In | 2e-08 | ||
| 3ctm_A | 279 | Crystal Structure Of A Carbonyl Reductase From Cand | 2e-08 | ||
| 3rkr_A | 262 | Crystal Structure Of A Metagenomic Short-Chain Oxid | 2e-08 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 2e-08 | ||
| 3ezl_A | 256 | Crystal Structure Of Acetyacetyl-Coa Reductase From | 3e-08 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 3e-08 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 3e-08 | ||
| 3i3o_A | 291 | 2.06 Angstrom Resolution Crystal Structure Of A Sho | 4e-08 | ||
| 3ijr_A | 291 | 2.05 Angstrom Resolution Crystal Structure Of A Sho | 5e-08 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 5e-08 | ||
| 2ztu_A | 260 | T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C | 5e-08 | ||
| 1wmb_A | 260 | Crystal Structure Of Nad Dependent D-3-Hydroxybutyl | 6e-08 | ||
| 2ztm_A | 260 | T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L | 6e-08 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 7e-08 | ||
| 2hsd_A | 253 | The Refined Three-Dimensional Structure Of 3alpha,2 | 7e-08 | ||
| 4fc6_A | 277 | Studies On Dcr Shed New Light On Peroxisomal Beta-O | 7e-08 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 7e-08 | ||
| 3e03_A | 274 | Crystal Structure Of A Putative Dehydrogenase From | 9e-08 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 9e-08 | ||
| 1zbq_A | 327 | Crystal Structure Of Human 17-beta-hydroxysteroid D | 1e-07 | ||
| 3oml_A | 613 | Structure Of Full-Length Peroxisomal Multifunctiona | 1e-07 | ||
| 3dwf_A | 276 | Crystal Structure Of The Guinea Pig 11beta-Hydroxys | 1e-07 | ||
| 3g49_A | 277 | N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b- | 1e-07 | ||
| 1xse_A | 295 | Crystal Structure Of Guinea Pig 11beta-Hydroxystero | 2e-07 | ||
| 3lz6_A | 263 | Guinea Pig 11beta Hydroxysteroid Dehydrogenase With | 2e-07 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 2e-07 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 2e-07 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 2e-07 | ||
| 3gmd_A | 264 | Structure-Based Design Of 7-Azaindole-Pyrrolidines | 2e-07 | ||
| 4bb6_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 2e-07 | ||
| 3v2g_A | 271 | Crystal Structure Of A DehydrogenaseREDUCTASE FROM | 2e-07 | ||
| 1y5m_A | 276 | The Crystal Structure Of Murine 11b-Hydroxysteroid | 2e-07 | ||
| 2z1n_A | 260 | Crystal Structure Of Ape0912 From Aeropyrum Pernix | 2e-07 | ||
| 2bel_A | 283 | Structure Of Human 11-Beta-Hydroxysteroid Dehydroge | 2e-07 | ||
| 3tl3_A | 257 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 3e-07 | ||
| 4bb5_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 3e-07 | ||
| 3nyw_A | 250 | Crystal Structure Of A Betaketoacyl-[acp] Reductase | 3e-07 | ||
| 4hfr_A | 272 | Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In | 3e-07 | ||
| 3d5q_A | 272 | Crystal Structure Of 11b-Hsd1 In Complex With Triaz | 3e-07 | ||
| 2ilt_A | 275 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 3e-07 | ||
| 3ch6_A | 286 | Crystal Structure Of 11beta-Hsd1 Double Mutant (L26 | 3e-07 | ||
| 2rbe_A | 275 | The Discovery Of 2-Anilinothiazolones As 11beta-Hsd | 3e-07 | ||
| 3pdj_A | 273 | Crystal Structure Of Human 11-Beta-Hydroxysteroid D | 3e-07 | ||
| 2irw_A | 264 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 3e-07 | ||
| 1xu7_A | 286 | Crystal Structure Of The Interface Open Conformatio | 3e-07 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 4e-07 | ||
| 3v8b_A | 283 | Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro | 5e-07 | ||
| 3imf_A | 257 | 1.99 Angstrom Resolution Crystal Structure Of A Sho | 5e-07 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 5e-07 | ||
| 3rd5_A | 291 | Crystal Structure Of A Putative Uncharacterized Pro | 7e-07 | ||
| 3vtz_A | 269 | Structure Of Thermoplasma Volcanium Aldohexose Dehy | 7e-07 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 9e-07 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 9e-07 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 1e-06 | ||
| 3pxx_A | 287 | Crystal Structure Of Carveol Dehydrogenase From Myc | 1e-06 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 1e-06 | ||
| 3i4f_A | 264 | Structure Of Putative 3-oxoacyl-reductase From Baci | 1e-06 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 1e-06 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 2e-06 | ||
| 1gz6_A | 319 | (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat | 2e-06 | ||
| 3gdf_A | 267 | Crystal Structure Of The Nadp-Dependent Mannitol De | 2e-06 | ||
| 1nfr_A | 260 | Rv2002 Gene Product From Mycobacterium Tuberculosis | 2e-06 | ||
| 3s55_A | 281 | Crystal Structure Of A Putative Short-Chain Dehydro | 2e-06 | ||
| 2ew8_A | 249 | Crystal Structure Of The (s)-specific 1-phenylethan | 2e-06 | ||
| 2zat_A | 260 | Crystal Structure Of A Mammalian Reductase Length = | 2e-06 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 3e-06 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 3e-06 | ||
| 1yb1_A | 272 | Crystal Structure Of Human 17-Beta-Hydroxysteroid D | 3e-06 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 3e-06 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 3e-06 | ||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 3e-06 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 3e-06 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 4e-06 | ||
| 1geg_A | 256 | Cryatal Structure Analysis Of Meso-2,3-Butanediol D | 4e-06 | ||
| 3u9l_A | 324 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 5e-06 | ||
| 3awd_A | 260 | Crystal Structure Of Gox2181 Length = 260 | 5e-06 | ||
| 3sju_A | 279 | Hedamycin Polyketide Ketoreductase Bound To Nadph L | 7e-06 | ||
| 3rku_A | 287 | Substrate Fingerprint And The Structure Of Nadp+ De | 8e-06 | ||
| 4imr_A | 275 | Crystal Structure Of 3-oxoacyl (acyl-carrier-protei | 1e-05 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 1e-05 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 1e-05 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 1e-05 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 1e-05 | ||
| 4dml_A | 269 | 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn | 1e-05 | ||
| 2nwq_A | 272 | Short Chain Dehydrogenase From Pseudomonas Aerugino | 1e-05 | ||
| 1uls_A | 245 | Crystal Structure Of Tt0140 From Thermus Thermophil | 1e-05 | ||
| 2jah_A | 247 | Biochemical And Structural Analysis Of The Clavulan | 2e-05 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-05 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 3e-05 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-05 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-05 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 4e-05 | ||
| 3uf0_A | 273 | Crystal Structure Of A Putative Nad(P) Dependent Gl | 5e-05 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 5e-05 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 5e-05 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 5e-05 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 6e-05 | ||
| 2b4q_A | 276 | Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex | 7e-05 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 8e-05 | ||
| 1x1e_A | 239 | Crystal Structure Of Tt0495 Protein From Thermus Th | 8e-05 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 1e-04 | ||
| 3ucx_A | 264 | The Structure Of A Short Chain Dehydrogenase From M | 1e-04 | ||
| 3gvc_A | 277 | Crystal Structure Of Probable Short-Chain Dehydroge | 1e-04 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 1e-04 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 1e-04 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 1e-04 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-04 | ||
| 1so8_A | 261 | Abeta-bound Human Abad Structure [also Known As 3-h | 2e-04 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 2e-04 | ||
| 2o23_A | 265 | The Structure Of Wild-Type Human Hadh2 (17beta-Hydr | 2e-04 | ||
| 3itd_A | 270 | Crystal Structure Of An Inactive 17beta-Hydroxyster | 2e-04 | ||
| 3is3_A | 270 | Crystal Structure Of 17beta-Hydroxysteroid Dehydrog | 2e-04 | ||
| 1pr9_A | 244 | Human L-Xylulose Reductase Holoenzyme Length = 244 | 2e-04 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-04 | ||
| 1u7t_A | 261 | Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT | 2e-04 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 2e-04 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 2e-04 | ||
| 3t4x_A | 267 | Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU | 2e-04 | ||
| 3d3w_B | 245 | Structure Of L-Xylulose Reductase With Bound Coenzy | 3e-04 | ||
| 3d3w_A | 244 | Structure Of L-Xylulose Reductase With Bound Coenzy | 3e-04 | ||
| 1wma_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Hyd | 3e-04 | ||
| 3qlj_A | 322 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 3e-04 | ||
| 4iqg_C | 271 | Crystal Structure Of Bpro0239 Oxidoreductase From P | 3e-04 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-04 | ||
| 2pfg_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Big | 4e-04 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-04 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 4e-04 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 4e-04 | ||
| 2bd0_A | 244 | Chlorobium Tepidum Sepiapterin Reductase Complexed | 5e-04 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 6e-04 | ||
| 1hxh_A | 253 | Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D | 6e-04 | ||
| 4hp8_A | 247 | Crystal Structure Of A Putative 2-Deoxy-D-Gluconate | 6e-04 | ||
| 1o5i_A | 249 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 7e-04 | ||
| 3lf1_A | 265 | Apo Structure Of The Short Chain Oxidoreductase Q9h | 7e-04 | ||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 8e-04 | ||
| 2hrb_A | 274 | Crystal Structure Of Human Carbonyl Reductase 3, Co | 8e-04 | ||
| 3a28_C | 258 | Crystal Structure Of L-2,3-Butanediol Dehydrogenase | 9e-04 |
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289 | Back alignment and structure |
|
| >pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278 | Back alignment and structure |
|
| >pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327 | Back alignment and structure |
|
| >pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266 | Back alignment and structure |
|
| >pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260 | Back alignment and structure |
|
| >pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251 | Back alignment and structure |
|
| >pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285 | Back alignment and structure |
|
| >pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257 | Back alignment and structure |
|
| >pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346 | Back alignment and structure |
|
| >pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265 | Back alignment and structure |
|
| >pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291 | Back alignment and structure |
|
| >pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260 | Back alignment and structure |
|
| >pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253 | Back alignment and structure |
|
| >pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
| >pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327 | Back alignment and structure |
|
| >pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613 | Back alignment and structure |
|
| >pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276 | Back alignment and structure |
|
| >pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277 | Back alignment and structure |
|
| >pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295 | Back alignment and structure |
|
| >pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264 | Back alignment and structure |
|
| >pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271 | Back alignment and structure |
|
| >pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276 | Back alignment and structure |
|
| >pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260 | Back alignment and structure |
|
| >pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283 | Back alignment and structure |
|
| >pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257 | Back alignment and structure |
|
| >pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250 | Back alignment and structure |
|
| >pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272 | Back alignment and structure |
|
| >pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286 | Back alignment and structure |
|
| >pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275 | Back alignment and structure |
|
| >pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264 | Back alignment and structure |
|
| >pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283 | Back alignment and structure |
|
| >pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291 | Back alignment and structure |
|
| >pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319 | Back alignment and structure |
|
| >pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267 | Back alignment and structure |
|
| >pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281 | Back alignment and structure |
|
| >pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249 | Back alignment and structure |
|
| >pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
| >pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256 | Back alignment and structure |
|
| >pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324 | Back alignment and structure |
|
| >pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260 | Back alignment and structure |
|
| >pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279 | Back alignment and structure |
|
| >pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287 | Back alignment and structure |
|
| >pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269 | Back alignment and structure |
|
| >pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272 | Back alignment and structure |
|
| >pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245 | Back alignment and structure |
|
| >pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264 | Back alignment and structure |
|
| >pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265 | Back alignment and structure |
|
| >pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267 | Back alignment and structure |
|
| >pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 245 | Back alignment and structure |
|
| >pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244 | Back alignment and structure |
|
| >pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276 | Back alignment and structure |
|
| >pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322 | Back alignment and structure |
|
| >pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253 | Back alignment and structure |
|
| >pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247 | Back alignment and structure |
|
| >pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249 | Back alignment and structure |
|
| >pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265 | Back alignment and structure |
|
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
| >pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274 | Back alignment and structure |
|
| >pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 4e-51
Identities = 52/269 (19%), Positives = 105/269 (39%), Gaps = 60/269 (22%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ H+ +TG SG+G AL + G +VS++ R ++L++ + + G V A
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL----GNAVIGIVA 56
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+ + V A A G ++++ G G + V + +++R +++ N+ + +
Sbjct: 57 DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+ + LI +R GG +A + S A Q Y
Sbjct: 117 QQTVRLIGER--GG--VLANVLSSAAQ-------------------VGKANESLYC---- 149
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
ASK+G+RG E+L+ E+ + + ++P + + +
Sbjct: 150 ----------------ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVD 193
Query: 271 PRLTSIIAASSGAMKADEVAKKALDGIKS 299
P G M ++ A LD +++
Sbjct: 194 PS---------GFMTPEDAAAYMLDALEA 213
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 161 bits (408), Expect = 6e-47
Identities = 56/291 (19%), Positives = 110/291 (37%), Gaps = 59/291 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYS 93
R F+TGG++G+G+ L Q +G +V+I +++A ++ +G EV
Sbjct: 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV + K A DE GPV +L N GV + +E S D+ ++ VN+ G +
Sbjct: 66 LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNG 125
Query: 150 IKAALPLIKKR---QNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYH 206
+ +P + +R + +S A + G Y+
Sbjct: 126 VTTFVPRMVERVKAGEQKGGHVVNTASMAAF-------------------LAAGSPGIYN 166
Query: 207 VTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP----- 261
+KF +RGL+E+L ++ +I VS++ P ++
Sbjct: 167 --------------------TTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD 206
Query: 262 -------GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVP 305
E + + + + M+ D + + ++ +K+ +
Sbjct: 207 DIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKANRLHIF 257
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 2e-46
Identities = 53/272 (19%), Positives = 97/272 (35%), Gaps = 57/272 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ + V +TG S GIG +A+ AK GA V + ARS + L++ +
Sbjct: 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
+ D + + +A G +D+L++N L + VR ++VN +
Sbjct: 86 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 145
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
AALP++K+ SI ++SS AG+ + Y
Sbjct: 146 VAALPMLKQSN----GSIVVVSSLAGKV-------------------AYPMVAAYS---- 178
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD--DIHVSLIFPPDTETPGLEEENK 268
ASKF L G ++++E ++ ++L +T +
Sbjct: 179 ----------------ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS 222
Query: 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSG 300
+ A +E A + + G
Sbjct: 223 GIVHMQ--------AAPKEECALEIIKGGALR 246
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 3e-45
Identities = 62/312 (19%), Positives = 109/312 (34%), Gaps = 62/312 (19%)
Query: 21 LLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQS 80
L + PK R + V ITG GIG A++ AK +++ + + LEE
Sbjct: 16 LYFQGHMPKR-RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAK 74
Query: 81 IQLATGIEVATYSADVRDFDAVKTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVR 136
+ G +V T+ D + + + ++ E G V +LV N GV +L ++
Sbjct: 75 CK-GLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIE 133
Query: 137 LMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196
+VN+ F KA LP + K +G I ++S AG
Sbjct: 134 KTFEVNVLAHFWTTKAFLPAMTKNNHG---HIVTVASAAGHV------------------ 172
Query: 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA---DDIHVSLI 253
S Y +SKF G + L E+ A + + +
Sbjct: 173 -SVPFLLAYC--------------------SSKFAAVGFHKTLTDELAALQITGVKTTCL 211
Query: 254 FPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLL 313
P T ++ + ++ +EV + + GI + ++ S L
Sbjct: 212 CPNFVNTGFIKNPSTSLGPT----------LEPEEVVNRLMHGILTEQKMIFIPSSIAFL 261
Query: 314 SIATAGLSPQRS 325
+ + P+ S
Sbjct: 262 TTL-ERILPEGS 272
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-44
Identities = 81/296 (27%), Positives = 123/296 (41%), Gaps = 59/296 (19%)
Query: 27 RPKPVRIPIKD---RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL 83
P + + R +TGG+SGIGLA A + A+ GAR+ + LE+A ++
Sbjct: 18 GPGSMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLR- 76
Query: 84 ATGIEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMI 139
G + DVR D + DEA G VDV+ N G+ V G L + D+ R +I
Sbjct: 77 GQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVI 136
Query: 140 DVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSG 199
D+++ GS H ++A LP + ++ GG IA +S AG
Sbjct: 137 DIDLWGSIHAVEAFLPRLLEQGTGG--HIAFTASFAGL-------------------VPN 175
Query: 200 KGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259
G G Y +K+G+ GLAE L +EV + I VS++ P E
Sbjct: 176 AGLGTYG--------------------VAKYGVVGLAETLAREVKPNGIGVSVLCPMVVE 215
Query: 260 TPGLEEENKRRPRLTSIIAASSGA----------MKADEVAKKALDGIKSGSFIVP 305
T + + R + A GA + AD+VA+ D I + +
Sbjct: 216 TKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANRLYIL 271
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 2e-43
Identities = 49/258 (18%), Positives = 81/258 (31%), Gaps = 64/258 (24%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V ITG + G+G A A G + + R L E LA + AD+ D
Sbjct: 3 VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAE------LAREVGARALPADLADE 54
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKK 159
K L+EAGP+D+LV G + D V M+ ++ + L +
Sbjct: 55 LEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA----FVLKHARF 110
Query: 160 RQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCL 219
++ + G Y
Sbjct: 111 QKGA---RAVFFGAYPRY-------------------VQVPGFAAYA------------- 135
Query: 220 LGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAA 279
A+K L EA ++E++ + +H+ L+ P T
Sbjct: 136 -------AAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGPPKG------- 181
Query: 280 SSGAMKADEVAKKALDGI 297
A+ +E A+K L+G+
Sbjct: 182 ---ALSPEEAARKVLEGL 196
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 3e-42
Identities = 54/261 (20%), Positives = 96/261 (36%), Gaps = 48/261 (18%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ V + G IG +A + A EG V R+G+KL I+ A G + S
Sbjct: 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIE-AAGGRIVARSL 63
Query: 95 DVRDFDAVKTALDEA---GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
D R+ D V L+ A P++V + N G V + + R + ++ F +
Sbjct: 64 DARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGR 123
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+ L+ G I + A +G G+
Sbjct: 124 ESARLMLAHGQG---KIFFTGATASL----------------------RGGSGFAA---- 154
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVS-LIFPPDTETPGLEEENKRR 270
F ++KFGLR +A+++ +E++ +IHV+ LI +T + E ++
Sbjct: 155 -----FA--------SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM 201
Query: 271 PRLTSIIAASSGAMKADEVAK 291
++ M VA
Sbjct: 202 FGKDALANP-DLLMPPAAVAG 221
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 4e-42
Identities = 56/262 (21%), Positives = 101/262 (38%), Gaps = 57/262 (21%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG--IEVATY 92
+ ITG S GIG +A A +G RV ++ARS + LE+ I + E
Sbjct: 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
D+ D T + + G VD+LV +F+ G L + +D R ++++N+ +
Sbjct: 65 PLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLS-EPVDNFRKIMEINVIAQYG 123
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVT 208
++K ++K ++NG I ++S+A + G Y
Sbjct: 124 ILKTVTEIMKVQKNG---YIFNVASRAAK-------------------YGFADGGIYG-- 159
Query: 209 SWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268
++KF L GLAE+L +E+ I V+ + P T ++
Sbjct: 160 ------------------STKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT 201
Query: 269 RRPRLTSIIAASSGAMKADEVA 290
++ D++
Sbjct: 202 PFKDEE--------MIQPDDLL 215
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 9e-41
Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 57/255 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
ITG S GIG A+A A++G +++ ARS +LE+ + G+EV + DV
Sbjct: 5 AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA 64
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
++V+ + G VDV+V N G+ LE S +E MI+VN+ G + +KA L
Sbjct: 65 ESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLD 124
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+K+ ++ S + + GGY
Sbjct: 125 SLKRTGGL---ALVTTSDVSARLI--------------------PYGGGY---------- 151
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275
++K+ R L Q E D+ + P +T + +
Sbjct: 152 --V--------STKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGK------ 193
Query: 276 IIAASSGAMKADEVA 290
G +K DE+A
Sbjct: 194 --PKEKGYLKPDEIA 206
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 4e-40
Identities = 65/260 (25%), Positives = 101/260 (38%), Gaps = 62/260 (23%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
V ITG S GIG A A +G RV ++AR K+L+ ++
Sbjct: 3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-----GALPLPG 57
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DVR+ A+ G + LV N GV V + +L+E RL++D N+TG+F I
Sbjct: 58 DVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGI 117
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+ A+P + +R G +I + S AG+ + KG Y+
Sbjct: 118 RHAVPALLRRGGG---TIVNVGSLAGK-------------------NPFKGGAAYN---- 151
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
ASKFGL GLA A ++ ++ V + P +T
Sbjct: 152 ----------------ASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTG--------- 186
Query: 271 PRLTSIIAASSGAMKADEVA 290
+ +K ++VA
Sbjct: 187 --FAGNTPGQAWKLKPEDVA 204
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 8e-40
Identities = 43/253 (16%), Positives = 87/253 (34%), Gaps = 56/253 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ ITG SSG+G LA EG + RS KL + V + D+
Sbjct: 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SNNVGYRARDLASH 59
Query: 100 DAVKTALDEA-GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIK 158
V+ ++ +V + G G L+ Q ++++ +I+ N++ + ++++ + K
Sbjct: 60 QEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYK 119
Query: 159 KRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFC 218
+ + ++ S A Q Y
Sbjct: 120 DQ-PVN---VVMIMSTAAQ-------------------QPKAQESTYC------------ 144
Query: 219 LLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIA 278
A K+ ++GL E+++ E+ + + ++P T E K +
Sbjct: 145 --------AVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSS---- 192
Query: 279 ASSGAMKADEVAK 291
M A++ A
Sbjct: 193 ----FMSAEDAAL 201
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 3e-36
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
++ + ITG SSGIG A A A EGA V+I AR +KL + A G +V
Sbjct: 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELT-AAGAKVHVLE 62
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV D V A+ G +D+LV N G+ + G +E + MID N+ G +M
Sbjct: 63 LDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYM 122
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
+AALP + + + ++ MSS AG+ + + Y
Sbjct: 123 TRAALPHLLRSK----GTVVQMSSIAGR-------------------VNVRNAAVY---- 155
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
A+KFG+ +E L+QEV + V +I P T+T
Sbjct: 156 --------Q--------ATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDT 190
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 4e-36
Identities = 51/262 (19%), Positives = 88/262 (33%), Gaps = 63/262 (24%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K + +TG + G+G+ + +++ L R+ + L LA V +
Sbjct: 3 LKKKIAVVTGATGGMGIEIVKDLSRDHIVY-ALGRNPEHLAA------LAEIEGVEPIES 55
Query: 95 DVRDFDAVKT---ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
D+ + L VD LV V +E S+ E +D+N+ + +
Sbjct: 56 DIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSR 115
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
LP ++ + ++S AG G+ Y
Sbjct: 116 QLLPALRAAS----GCVIYINSGAGN-------------------GPHPGNTIYA----- 147
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLEEENK 268
ASK LRGLA+A ++E + I VS + P T TP GL +
Sbjct: 148 ---------------ASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG 192
Query: 269 RRPRLTSIIAASSGAMKADEVA 290
++ E+A
Sbjct: 193 TN-------FRPEIYIEPKEIA 207
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 5e-36
Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 49/230 (21%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ D+ + ITG S GIG +A + GA++ + AR ++E I+ G
Sbjct: 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIR-DAGGTALAQVL 60
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D +V A G +DVLV N GV L +DE MIDVNI G I
Sbjct: 61 DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
A LP+++ +++G I + S S Y
Sbjct: 121 GAVLPIMEAQRSG---QIINIGSIGAL-------------------SVVPTAAVY----- 153
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
C A+KF +R +++ L+QE + +I V+ + P E+
Sbjct: 154 -------C--------ATKFAVRAISDGLRQE--STNIRVTCVNPGVVES 186
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 2e-35
Identities = 52/266 (19%), Positives = 97/266 (36%), Gaps = 69/266 (25%)
Query: 40 VFITGGSSGIGLALAHQAAKEGAR-------VSILARSGKKLEEAKQSIQLATGIEVATY 92
+ ITG GIG A+A + A+ + + +R+ LE+ + A G T
Sbjct: 5 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR-AEGALTDTI 63
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
+AD+ D V+ G +D LV N GV G L + ++ ++ N+ G+F
Sbjct: 64 TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVT 208
+ +A L++++ +G I ++S A K +
Sbjct: 124 LTQALFALMERQHSG---HIFFITSVAAT----------------------KAFRHSSIY 158
Query: 209 SWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLEE 265
SKFG RGL E ++ ++ ++ + P TP +++
Sbjct: 159 C-----------------MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD 201
Query: 266 ENKRRPRLTSIIAASSGAMKADEVAK 291
E + M +++A
Sbjct: 202 EMQAL------------MMMPEDIAA 215
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-35
Identities = 67/266 (25%), Positives = 109/266 (40%), Gaps = 61/266 (22%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
+ V ITG SSGIG A+A + ++EG + +LAR ++L+ L
Sbjct: 13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA------LNLP-NTLCAQ 65
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV D TA+ A GP D +V N G+ + G+++ Q +E + M DVN+ G +
Sbjct: 66 VDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNG 125
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
++A L +K R G +I +SS AG+ + H Y
Sbjct: 126 MQAVLAPMKARNCG---TIINISSIAGK-------------------KTFPDHAAY---- 159
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269
C +KF + ++E +++EV A ++ V I P +T E +
Sbjct: 160 --------C--------GTKFAVHAISENVREEVAASNVRVMTIAPSAVKT---ELLSHT 200
Query: 270 R-----PRLTSIIAASSGAMKADEVA 290
+ G + AD+VA
Sbjct: 201 TSQQIKDGYDAWRVDMGGVLAADDVA 226
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 4e-35
Identities = 59/253 (23%), Positives = 89/253 (35%), Gaps = 50/253 (19%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+ +TG SSG G A+A A G V AR + L++ A S DV
Sbjct: 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA----AYPDRAEAISLDVT 61
Query: 98 DFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D + + + G VDVLV N G G E + E+R + ++++ G + +A
Sbjct: 62 DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL 121
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
LP +++R +G S+ +SS GQ S G Y
Sbjct: 122 LPQMRERGSG---SVVNISSFGGQ-------------------LSFAGFSAYS------- 152
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
A+K L L+E L EV I V ++ P T +
Sbjct: 153 -------------ATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEE 199
Query: 274 TSIIAASSGAMKA 286
A G +
Sbjct: 200 NPAYAEKVGPTRQ 212
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-34
Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 48/232 (20%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
+FITG +SG G A A + A+ G + + R ++L+ +L+ V +
Sbjct: 18 SHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG--ELSAKTRVLPLT 75
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFH 148
DVRD A+ A+D + L+ N G+ + + + LD+ M+D NI G +
Sbjct: 76 LDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLY 135
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVT 208
+ LP + G SI + S AG+ G Y
Sbjct: 136 STRLLLPRLIAHGAGA--SIVNLGSVAGK-------------------WPYPGSHVYG-- 172
Query: 209 SWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
+K + + L+ ++ + V+ + P E+
Sbjct: 173 ------------------GTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCES 206
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-34
Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ + +TG S GIG A+A + GARV + AR +KL ++ I A G E +++
Sbjct: 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV-AAGGEAESHAC 85
Query: 95 DVRDFDAV----KTALDEAGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHM 149
D+ DA+ L G DVLV N GV G L E +I VN+ + +
Sbjct: 86 DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLL 145
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
++A P + + G I +SS AG+ + Y
Sbjct: 146 LRAFAPAMIAAKRG---HIINISSLAGK-------------------NPVADGAAY---- 179
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269
ASK+GL GL + +E+ + VSL+ P T + +
Sbjct: 180 ----------------TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK 223
Query: 270 RPRLTSIIAASSGAMKADEVA 290
+ L GA++ D++A
Sbjct: 224 KSAL--------GAIEPDDIA 236
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 5e-34
Identities = 70/270 (25%), Positives = 98/270 (36%), Gaps = 59/270 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITG +SGIGLA A + EGARV I R L+ A I G AD
Sbjct: 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GGGAVGIQAD 83
Query: 96 VRDFDAVK----TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ + EAG +DVL VN G L + ++ D N+ G ++
Sbjct: 84 SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQ 143
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
ALPL+ + G S+ L S AG G + V +
Sbjct: 144 KALPLLAR---GS--SVVLTGSTAGS----------------------TGTPAFSVYA-- 174
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
ASK LR A ++ I ++ + P TET GL E + P
Sbjct: 175 ---------------ASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDP 219
Query: 272 RLTSIIAASSGAM-------KADEVAKKAL 294
+ + A +A+EVA AL
Sbjct: 220 VQQQGLLNALAAQVPMGRVGRAEEVAAAAL 249
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-33
Identities = 57/269 (21%), Positives = 88/269 (32%), Gaps = 58/269 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + + GG+ G+GLA + + GA V + R+ + ++ G V +D
Sbjct: 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GPRVHALRSD 62
Query: 96 VRDFDA----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ D + A G +D+L +N GV + S VN G+F ++
Sbjct: 63 IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
PLI++ SI SS A + GH G V S
Sbjct: 123 RLTPLIRE-----GGSIVFTSSVADE----------------------GGHPGMSVYS-- 153
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
ASK L A L E++ I V+ + P +TP
Sbjct: 154 ---------------ASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEA 198
Query: 272 RLTSIIAASSGAM------KADEVAKKAL 294
ADEVA+ L
Sbjct: 199 ERAEFKTLGDNITPMKRNGTADEVARAVL 227
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-33
Identities = 55/265 (20%), Positives = 91/265 (34%), Gaps = 50/265 (18%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ +TG SG+G A+A A G V++ R L+E I G +
Sbjct: 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----GDDALCVPT 81
Query: 95 DVRDFDAV----KTALDEAGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHM 149
DV D D+V +++ G VDVL N G P +E + + + ++D N+TG F
Sbjct: 82 DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLC 141
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
+ A ++K ++ G I S + S Y
Sbjct: 142 TQEAFRVMKAQEPRG-GRIINNGSISAT-------------------SPRPYSAPYT--- 178
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269
A+K + GL ++ + DI I + +TP ++
Sbjct: 179 -----------------ATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG 221
Query: 270 RPRLTSIIAASSGAMKADEVAKKAL 294
P+ I M VA +
Sbjct: 222 VPQADLSIKVEP-VMDVAHVASAVV 245
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 2e-33
Identities = 56/275 (20%), Positives = 99/275 (36%), Gaps = 53/275 (19%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
I + ITG SSGIGLA+A AKEGA + ++AR +L EA +S++ G+ V +
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV + V ++ G D+LV N G + + ++ + ++ + + +
Sbjct: 65 DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+ +P ++ R G +I +S +
Sbjct: 125 RGLVPGMRARGGG---AIIHNASICA----------VQPLWYEP---------------- 155
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
+ +K L ++ L EVI D+I V+ I P TP +
Sbjct: 156 --IYN-----------VTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIK----- 197
Query: 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVP 305
+ +G + A + F P
Sbjct: 198 --TAKELTKDNGGDWKGYLQSVADEHAPIKRFASP 230
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 3e-33
Identities = 54/264 (20%), Positives = 90/264 (34%), Gaps = 46/264 (17%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ R +TGG +G+G +A + EG V I R L+ A I TG V D
Sbjct: 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCD 91
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPG-ELEVQSLDEVRLMIDVNITGSFHMI 150
V D D V +D+LV N G VP LE + ++ ++ N+TG+F
Sbjct: 92 VGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCT 151
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+ A ++K + G I S + Q + Y
Sbjct: 152 QHAFRMMKAQTPRG-GRIINNGSISAQ-------------------TPRPNSAPYT---- 187
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
A+K + GL ++ + DI I + T +
Sbjct: 188 ----------------ATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV 231
Query: 271 PRLTSIIAASSGAMKADEVAKKAL 294
+ +AA + + +A+ +
Sbjct: 232 LQANGEVAAEP-TIPIEHIAEAVV 254
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 3e-33
Identities = 63/243 (25%), Positives = 97/243 (39%), Gaps = 59/243 (24%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL-------------ARSGKKLEEAKQSIQ 82
+ R FITG + G G A A + A EGA + + S L E + ++
Sbjct: 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE 69
Query: 83 LATGIEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLM 138
A + D RDFD ++ +D+ G +D++V N GV P + + ++ R +
Sbjct: 70 -AANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV 128
Query: 139 IDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198
+D+N+TG+++ + A P I + GG SI L+SS AG MK
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGGRGG--SIILISSAAG---------MKM---------- 167
Query: 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258
Y ASK + GLA A E+ I V+ + P
Sbjct: 168 QPFMIHYT--------------------ASKHAVTGLARAFAAELGKHSIRVNSVHPGPV 207
Query: 259 ETP 261
TP
Sbjct: 208 NTP 210
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 4e-33
Identities = 54/260 (20%), Positives = 97/260 (37%), Gaps = 57/260 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ------LATGIEV 89
+ + +FI+GGS GIGLA+A + A +GA V+++A+S + + +I G +
Sbjct: 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA 67
Query: 90 ATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITG 145
D+RD DAV A+ + G +D+ V N G +E L LM + + G
Sbjct: 68 LPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRG 127
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY 205
++ + ++ +P +K R N I +S E Y
Sbjct: 128 TYAVSQSCIPHMKGRDNPH---ILTLSPPIRL------------------EPKWLRPTPY 166
Query: 206 HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP------PDTE 259
+K+G+ A + +E+ I + ++P +
Sbjct: 167 M--------------------MAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQ 206
Query: 260 TPGLEEENKRRPRLTSIIAA 279
+E R R + A
Sbjct: 207 NLLGGDEAMARSRKPEVYAD 226
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 4e-33
Identities = 54/265 (20%), Positives = 95/265 (35%), Gaps = 53/265 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +T + GIG A A A+EGA+V + KL+E L + T D
Sbjct: 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE------LEKYPGIQTRVLD 58
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
V + +E +DVL G G + + +++N+ + MIKA LP
Sbjct: 59 VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLP 118
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+ +++G +I MSS A ++KG+ Y
Sbjct: 119 KMLAQKSG---NIINMSSVAS--------SVKGV----------VNRCVYS--------- 148
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275
+K + GL +++ + I I + + P +TP L+E + R
Sbjct: 149 -----------TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEE 197
Query: 276 IIAASSGAM------KADEVAKKAL 294
A+E+A +
Sbjct: 198 ARNDFLKRQKTGRFATAEEIAMLCV 222
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 124 bits (312), Expect = 8e-33
Identities = 50/256 (19%), Positives = 87/256 (33%), Gaps = 49/256 (19%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE----EAKQSIQLATGIEVATYSAD 95
+ ITG SSG G A A G RV R EA +++ T D
Sbjct: 8 ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELD 67
Query: 96 VRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V+ A+ + E G +DVL+ N G V G E + ++ + D+N+ + + +
Sbjct: 68 VQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNR 127
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
AALP ++++++G + +SS + + Y
Sbjct: 128 AALPHMRRQKHG---LLIWISSSSSAG------------------GTPPYLAPYF----- 161
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
A+K + +A +E+ I S+I P + + P
Sbjct: 162 ---------------AAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVP 206
Query: 272 RLTSIIAASSGAMKAD 287
+ A A
Sbjct: 207 DDHARQAEYEAGPNAG 222
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 8e-33
Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 51/221 (23%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TG ++G G + + ++G +V R ++L+E K + G + DVR+
Sbjct: 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNR 58
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMIKAAL 154
A++ L +D+LV N G+ + E S+++ MID N G +M +A L
Sbjct: 59 AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
P + +R +G I + S AG G Y
Sbjct: 119 PGMVERNHG---HIINIGSTAGS-------------------WPYAGGNVYG-------- 148
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255
A+K +R + L+ ++ + V+ I P
Sbjct: 149 ------------ATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 1e-32
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 51/235 (21%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEG---ARVSILARSGKKLEEAKQSIQLA-TGIEVA 90
+ + V ITG S+GIG A A + + ++ + AR +KLEE K++I +V
Sbjct: 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90
Query: 91 TYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITG 145
D+ + +K ++ +D+LV N G + + + + ++++ + D N+T
Sbjct: 91 VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTA 150
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY 205
++ +A LP+ + + +G I + S AG+ + Y
Sbjct: 151 LINITQAVLPIFQAKNSG---DIVNLGSIAGR-------------------DAYPTGSIY 188
Query: 206 HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
C ASKF + ++L++E+I I V LI P ET
Sbjct: 189 ------------C--------ASKFAVGAFTDSLRKELINTKIRVILIAPGLVET 223
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 2e-32
Identities = 50/233 (21%), Positives = 83/233 (35%), Gaps = 45/233 (19%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYS 93
+DR +TG S GIG A+A ++G +V AR+ +EE + A + Y
Sbjct: 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 89
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
D+ + + + + VD+ + N G+ P L S + M +VN+
Sbjct: 90 CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 149
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
+ A +K+R N I ++S +G H S
Sbjct: 150 TREAYQSMKER-NVDDGHIININSMSGH--------------------RVLPLSVTHFYS 188
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADD--IHVSLIFPPDTET 260
A+K+ + L E L+QE+ I + I P ET
Sbjct: 189 -----------------ATKYAVTALTEGLRQELREAQTHIRATCISPGVVET 224
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 2e-32
Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 58/260 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-------LEEAKQSIQLATGIE 88
VFITG S GIG A+A +AAK+GA + I A++ + + A + I+ A G +
Sbjct: 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGK 102
Query: 89 VATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIT 144
DVRD + A+++A G +D+LV N + LM++VN
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162
Query: 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGG 204
G++ KA +P +KK + I +S +
Sbjct: 163 GTYLASKACIPYLKKSKVA---HILNISPPLNL--------------------NPVWFKQ 199
Query: 205 YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT-ETPGL 263
+ + +K+G+ + +E +I V+ ++P T +
Sbjct: 200 HCA-----------------YTIAKYGMSMYVLGMAEEF-KGEIAVNALWPKTAIHTAAM 241
Query: 264 E----EENKRRPRLTSIIAA 279
+ + + R IIA
Sbjct: 242 DMLGGPGIESQCRKVDIIAD 261
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-32
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + FITGG +G+G + + GA+ I +R L+ + I TG +V D
Sbjct: 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCD 84
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
VRD D V+ + E G ++++ N E S + + + D+ + G+ +
Sbjct: 85 VRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTL 144
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
+ K Q G + +++ +
Sbjct: 145 EIGKQLIKAQKGA--AFLSITTIYAE 168
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 9e-32
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+D+ FITGG SGIG +A + G I +RS ++ A + + ATG S D
Sbjct: 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMD 85
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
VR AV A+D+A G +D+L+ S + + ++D++ +G+F++ +
Sbjct: 86 VRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSR 145
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
+ G I +++ G
Sbjct: 146 VLYEKFFRDHGG---VIVNITATLGN 168
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 9e-32
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITG S+GIG +A A+ GA+V++ AR L+ I G + D
Sbjct: 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA-GVGGKALPIRCD 89
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D V+ LD+ G +D+ V N G+ + L+E + + D N+TG F +
Sbjct: 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQ 149
Query: 152 AALPLIKKRQNGGPASIALMSSQAG 176
AA + + GG +I +S +G
Sbjct: 150 AAARAMVDQGLGG--TIITTASMSG 172
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-31
Identities = 43/281 (15%), Positives = 86/281 (30%), Gaps = 59/281 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ +++V GIGL + + K + ++ + + + + + ++
Sbjct: 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62
Query: 95 DV-RDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV K L + VD+L+ G+ ++ I +N TG +
Sbjct: 63 DVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNT 114
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
A L KR+ G IA + S G + Y
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV-------------------YS--- 152
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLEEE 266
ASK + +L + + I P T TP
Sbjct: 153 -----------------ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW 195
Query: 267 NKRRPRLTSIIAASSGAMKADEVAK---KALDGIKSGSFIV 304
PR+ ++ + +++ + KA++ K+G+
Sbjct: 196 LDVEPRVAELLLSHPT-QTSEQCGQNFVKAIEANKNGAIWK 235
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-31
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
++ + +TGG+ GIGLA A GA V+++ RS E + + G++ Y D
Sbjct: 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCD 72
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + D V + + GP+ L+ N GV V + ++ + DVN+ G F+ +
Sbjct: 73 VSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCR 132
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
A L ++Q G SI + SS + Q
Sbjct: 133 AVAKLWLQKQQKG--SIVVTSSMSSQ 156
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-31
Identities = 66/248 (26%), Positives = 102/248 (41%), Gaps = 59/248 (23%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSIL-------------ARSGKKLEEAKQSIQLATG 86
FITG + G G + A + A EGA + S + L+E + ++ G
Sbjct: 18 AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE-DQG 76
Query: 87 IEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVN 142
+ T DVRD A++ + + G +DV+V N GV G + + ++ +I VN
Sbjct: 77 RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVN 136
Query: 143 ITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGH 202
+TG++ ++A +P + + NGG SI ++SS AG +K G+
Sbjct: 137 LTGTWRTLRATVPAMIEAGNGG--SIVVVSSSAG---------LKA----------TPGN 175
Query: 203 GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262
G Y ASK GL L L E+ I V+ I P ETP
Sbjct: 176 GHYS--------------------ASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM 215
Query: 263 LEEENKRR 270
+E E
Sbjct: 216 IEPEAMME 223
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-31
Identities = 55/290 (18%), Positives = 91/290 (31%), Gaps = 66/290 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAK---EGARVSILARSGKKLEEAKQSIQ-LATGIEVAT 91
+TG S G G ALA Q A+ G+ + + ARS L + K+ + ++V
Sbjct: 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64
Query: 92 YSADVRDFDAVKTALDEA--------GPVDVLVVNQGVFVP---GELEVQSLDEVRLMID 140
+AD+ V+ L +L+ N G L V L EV
Sbjct: 65 AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124
Query: 141 VNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGK 200
+N+T + L + G ++ +SS K
Sbjct: 125 LNLTSMLCLTSGTLNAFQDS-PGLSKTVVNISSLCAL-------------------QPYK 164
Query: 201 GHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
G G Y C A K L + L E + V P +
Sbjct: 165 GWGLY------------C--------AGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDN 202
Query: 261 P------GLEEENKRRPRLTSIIAASSGAM-KADEVAKKALDGIKSGSFI 303
++ + R +L + + GA+ A+K L ++ +F
Sbjct: 203 DMQQLARETSKDPELRSKLQKLKS--DGALVDCGTSAQKLLGLLQKDTFQ 250
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-31
Identities = 61/272 (22%), Positives = 93/272 (34%), Gaps = 54/272 (19%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSIL------------ARSGKKLEEAKQSIQLATGI 87
V +TGG+ G G + A + A+EGA + + + + LEEA ++ TG
Sbjct: 13 VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE-KTGR 71
Query: 88 EVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNI 143
+ T DVRD AV L A G +DV+V N G+ G + DV+
Sbjct: 72 KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHL--PVQAFADAFDVDF 129
Query: 144 TGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGK-GH 202
G + + AALP + G SI S AG + + G
Sbjct: 130 VGVINTVHAALPYLTS---GA--SIITTGSVAG---------LIAAAQPPGAGGPQGPGG 175
Query: 203 GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262
GY +K + L ++ I ++I P + T
Sbjct: 176 AGYS--------------------YAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDM 215
Query: 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKAL 294
L R + A S A +A+
Sbjct: 216 LNSAPMYRQFRPDLEAPSRADALLAFPAMQAM 247
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-31
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K + +TG S GIG A+A A+ GA V+I S E+A+ + G+ Y +
Sbjct: 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQK-TYGVHSKAYKCN 91
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGV--FVPGELEVQSLDEVRLMIDVNITGSFHM 149
+ D +V+ + + G +DV V N GV E++V + D +I V++ G ++
Sbjct: 92 ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAG 176
+ KK G S+ + SS +G
Sbjct: 152 SHNIGKIFKKNGKG---SLIITSSISG 175
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-31
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITG + GIG +A A GAR+ + R +L+ A++++ G +V T + D
Sbjct: 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAID 78
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ + DA A G +DVLV N G+ P + I VN+ +
Sbjct: 79 LAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLAS 138
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
A + GG +I ++S A
Sbjct: 139 AVGKAMVAAGEGG--AIITVASAAAL 162
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-31
Identities = 58/259 (22%), Positives = 93/259 (35%), Gaps = 56/259 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-------KLEEAKQSIQLATGIE 88
+ +FITG S GIGLA+A +AA++GA V+I A+S + A ++ A G +
Sbjct: 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQ 63
Query: 89 VATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIT 144
D+R+ D V+ A+ G +D+LV N + LM VN
Sbjct: 64 GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNAR 123
Query: 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGG 204
GSF +A LP + + N I ++ L + H G
Sbjct: 124 GSFVCAQACLPHLLQAPNP---HILTLAPPPS-----------------LNPAWWGAHTG 163
Query: 205 YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP-PDTETPG- 262
Y +K G+ + L E + ++ ++P T
Sbjct: 164 YT--------------------LAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI 203
Query: 263 --LEEENKRRPRLTSIIAA 279
L + R I+A
Sbjct: 204 NMLPGVDAAACRRPEIMAD 222
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 3e-31
Identities = 66/276 (23%), Positives = 105/276 (38%), Gaps = 59/276 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL------------ARSGKKLEEAKQSIQL 83
+ + FITG + G G + A A+EGA + + + L E + ++
Sbjct: 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE- 85
Query: 84 ATGIEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPG-ELEVQSLDEVRLM 138
A G + DVRDFDA++ A+D+ G +D+++ N + G L R M
Sbjct: 86 ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145
Query: 139 IDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198
IDVN+ G++ + A+P I + GG SI SS G ++G
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRGG--SIVFTSSIGG---------LRG---------- 184
Query: 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258
+ G Y ASK GL GL + E+ +I V+++ P
Sbjct: 185 AENIGNYI--------------------ASKHGLHGLMRTMALELGPRNIRVNIVCPSSV 224
Query: 259 ETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKAL 294
TP L E R + + + L
Sbjct: 225 ATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVL 260
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 4e-31
Identities = 52/276 (18%), Positives = 90/276 (32%), Gaps = 59/276 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSA 94
+ +TGGSSGIGLA + GA V+ AR G++L A+ ++ Q G +
Sbjct: 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVC 66
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV D V+ + G +LV N G + + + + H +
Sbjct: 67 DVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPV 126
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+A LP ++ R + +I ++S + TS
Sbjct: 127 RAFLPQLESRADA---AIVCVNSLLAS----------------------QPEPHMVATS- 160
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLEEEN 267
A++ G++ L ++ E + V+ I E+ E
Sbjct: 161 ----------------AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAR 204
Query: 268 KRRPRLTSIIAASSGAMK---------ADEVAKKAL 294
+ R + A K E A+ L
Sbjct: 205 EERELDWAQWTAQLARNKQIPLGRLGKPIEAARAIL 240
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 4e-31
Identities = 50/266 (18%), Positives = 91/266 (34%), Gaps = 57/266 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + ITG + GIG A A +EGA V+I ++ +A I G D
Sbjct: 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GPAAYAVQMD 62
Query: 96 VRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D A+ ++ AG +D+LV N +F + + + + +N+ G+ ++
Sbjct: 63 VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ 122
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
AA + + GG I M+SQAG+ Y
Sbjct: 123 AAARQMIAQGRGG--KIINMASQAGR-------------------RGEALVAIYC----- 156
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
A+K + L ++ ++I I+V+ I P + + +
Sbjct: 157 ---------------ATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDAL-- 199
Query: 272 RLTSIIAASSGAMKADEVAKKALDGI 297
A E + + +
Sbjct: 200 ------FARYENRPRGEKKRLVGEAV 219
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 5e-31
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K++ V ITGGSSG+G +A + AKEGARV I R+ +KLEEAK I+ ++ T D
Sbjct: 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIE-QFPGQILTVQMD 63
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
VR+ D ++ +++ G +D+L+ N E S++ +I++ + G+F+ +
Sbjct: 64 VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQ 123
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
A ++ G +I M +
Sbjct: 124 AIGKYWIEKGIKG--NIINMVATYAW 147
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 5e-31
Identities = 66/294 (22%), Positives = 109/294 (37%), Gaps = 84/294 (28%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSIL----------------ARSGKKLEEAKQSIQL 83
F+TG + G G + A + A+EGA + + A + + L E ++
Sbjct: 14 AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK- 72
Query: 84 ATGIEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGE-LEVQSLDEVRLM 138
+ T DVRD+DA+K A+D G +D++V N G+ G+ L+ S ++ M
Sbjct: 73 GHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEM 132
Query: 139 IDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198
ID+N+ G + +KA +P + GG SI L SS G +K
Sbjct: 133 IDINLAGVWKTVKAGVPHMIAGGRGG--SIILTSSVGG---------LKA---------- 171
Query: 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHV-------- 250
G Y A+K G+ GL A E+ I V
Sbjct: 172 YPHTGHYV--------------------AAKHGVVGLMRAFGVELGQHMIRVNSVHPTHV 211
Query: 251 ----------SLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKAL 294
+F PD E PG ++ ++ ++ +++ L
Sbjct: 212 KTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL---PIPWVEPIDISNAVL 262
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 9e-31
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ-LATGIEVATYS 93
I+ + +T GSSG+G A A + A+ GAR+ + +R+ +KLE A I L +G +V +
Sbjct: 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 94 ADVRDFDAVKTALDEA---GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+R+ + ++A G D+LV + G PG +++ + + +
Sbjct: 65 GDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVG 124
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
+ A + ++ G + + S
Sbjct: 125 RRAAEQMVEKGWG---RMVYIGSVTLL 148
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 9e-31
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K +TGGS GIG A+ + A GARV +R+ K+L+E + + G+ V D
Sbjct: 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR-EKGLNVEGSVCD 78
Query: 96 VRDFDAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
+ + G +++LV N GV + E + + + +++ N ++H+
Sbjct: 79 LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 138
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
+ A PL+K QNG ++ +SS AG
Sbjct: 139 QIAYPLLKASQNG---NVIFLSSIAG 161
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-30
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+R +TGG+ IGLA A+ GARV I +A + ++ G +V++ D
Sbjct: 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLR-MEGHDVSSVVMD 70
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMI 150
V + ++V+ A+ G VD+LV G+ + + E + + +D+N+ G F
Sbjct: 71 VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSC 130
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
+A ++ +++ G I + S +G
Sbjct: 131 QAVGRIMLEQKQG---VIVAIGSMSG 153
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-30
Identities = 44/235 (18%), Positives = 89/235 (37%), Gaps = 49/235 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
D+ V I+G +G LA + A++GA + + AR+ ++LE+ + + TG + D
Sbjct: 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT-DTGRRALSVGTD 68
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMI 150
+ D V +DE G VDV++ N + + +R I++ + G+ +I
Sbjct: 69 ITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLI 128
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+ P +++ G ++ ++S + S +G Y
Sbjct: 129 QGFTPALEES--KG--AVVNVNSMVVR-------------------HSQAKYGAYK---- 161
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
+K L +++ L E+ I V+ + P L+
Sbjct: 162 ----------------MAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKS 200
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-30
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 7/142 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R V +TG GIG GARV ++R+ L+ + D
Sbjct: 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV-----RECPGIEPVCVD 60
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+ D++A + AL GPVD+LV N V + + + +VN+ + +
Sbjct: 61 LGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR 120
Query: 156 LIKKRQNGGPASIALMSSQAGQ 177
+ R G +I +SSQ Q
Sbjct: 121 GLIARGVPG--AIVNVSSQCSQ 140
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 3e-30
Identities = 59/273 (21%), Positives = 98/273 (35%), Gaps = 55/273 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
ITG SGIG A A A +G V L R+ ++EE I G + AD
Sbjct: 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIV-GAGGQAIALEAD 85
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMI 150
V D ++ A+ + G +D++V N G+ V ++ E I VN+ G+F +
Sbjct: 86 VSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTL 145
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+P +K+ + GG +I ++SS G + G Y
Sbjct: 146 HLTVPYLKQ-RGGG--AIVVVSSING-----------------TRTFTTPGATAYT---- 181
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
A+K + + L E+ I V+ + P ET + R
Sbjct: 182 ----------------ATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH 225
Query: 271 PRLTSIIAASSGAM---------KADEVAKKAL 294
T+I ++++VA+
Sbjct: 226 EEETAIPVEWPKGQVPITDGQPGRSEDVAELIR 258
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 6e-30
Identities = 32/142 (22%), Positives = 50/142 (35%), Gaps = 7/142 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+TG GIG GA+V + R+ L + D
Sbjct: 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA-----KECPGIEPVCVD 60
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+ D+DA + AL GPVD+LV N + + + + VN+ F + +
Sbjct: 61 LGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 120
Query: 156 LIKKRQNGGPASIALMSSQAGQ 177
+ R G SI +SS
Sbjct: 121 DMINRGVPG--SIVNVSSMVAH 140
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 6e-30
Identities = 64/242 (26%), Positives = 98/242 (40%), Gaps = 58/242 (23%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL------------ARSGKKLEEAKQSIQL 83
+ FITG + G G A A + A +GA + + + ++L + ++
Sbjct: 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE- 70
Query: 84 ATGIEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMI 139
G + ADVRD +++ AL G +D++V N G+ D +I
Sbjct: 71 DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMS----AGDDGWHDVI 126
Query: 140 DVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSG 199
DVN+TG +H IK A+P + K+ GG SI L+SS AG + G+ S+
Sbjct: 127 DVNLTGVYHTIKVAIPTLVKQGTGG--SIVLISSSAG---------LAGV------GSAD 169
Query: 200 KGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259
G GY A+K G+ GL + I V+ I P E
Sbjct: 170 PGSVGYV--------------------AAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVE 209
Query: 260 TP 261
TP
Sbjct: 210 TP 211
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 6e-30
Identities = 33/140 (23%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+TGGS GIG + + A GA V +R+ K+L + + + G +V D+
Sbjct: 14 VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR-SKGFKVEASVCDLSSRSE 72
Query: 102 VKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
+ ++ G +++LV N G+ + E + ++++ L++ +N ++H+ A P
Sbjct: 73 RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 132
Query: 157 IKKRQNGGPASIALMSSQAG 176
+K + G ++ +SS +G
Sbjct: 133 LKASERG---NVVFISSVSG 149
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 8e-30
Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+ +TG GIG A+A + K+G V+I + + I G DV
Sbjct: 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN-QAGGHAVAVKVDVS 61
Query: 98 DFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D D AV+ A G DV+V N GV +E + + V + ++N+ G I+AA
Sbjct: 62 DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 121
Query: 154 LPLIKKRQNGGPASIALMSSQAGQ 177
+ KK +GG I SQAG
Sbjct: 122 VEAFKKEGHGG--KIINACSQAGH 143
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-29
Identities = 64/229 (27%), Positives = 89/229 (38%), Gaps = 49/229 (21%)
Query: 40 VFITGGSSGIGLALAHQAAKE---GARVSILARSGKKLE--EAKQSIQLATGIEVATYSA 94
V ITG SSGIGL LA + A + +V R K + T
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 95 DVRDFDAVKTALDEA--GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
DVRD +V A + G VDVLV N G+ + G LE D V ++DVN+ G+ M++A
Sbjct: 65 DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124
Query: 153 ALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRE 212
LP +K+R +G + + S G + Y
Sbjct: 125 FLPDMKRRGSG---RVLVTGSVGGL-------------------MGLPFNDVYC------ 156
Query: 213 LSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
ASKF L GL E+L ++ +H+SLI T
Sbjct: 157 --------------ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-29
Identities = 63/275 (22%), Positives = 104/275 (37%), Gaps = 54/275 (19%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSA 94
+ ITG +SGIGLA+A AK GA + + ++ + + V + A
Sbjct: 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPA 83
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+ + + G D+LV N GV ++E +++ +I VN++ SFH I
Sbjct: 84 DMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTI 143
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+ A+P +KK+ G I ++S G L S K Y
Sbjct: 144 RGAIPPMKKKGWG---RIINIASAHG-----------------LVASPFKSA--YV---- 177
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
A+K G+ GL + + EV + V+ I P TP +E
Sbjct: 178 ----------------AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVE------ 215
Query: 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVP 305
+ A + G + + + L G + FI
Sbjct: 216 -KQIPDQARTRGITEEQVINEVMLKGQPTKKFITV 249
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-29
Identities = 38/268 (14%), Positives = 76/268 (28%), Gaps = 67/268 (25%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TGGS GIG A+ + I + + AD+
Sbjct: 7 YLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE----------NLKFIKADLTKQ 56
Query: 100 DAVKTALDEA--GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLI 157
+ LD D + +N G+ + G + ++ ++ ++D+N+ S + IK +
Sbjct: 57 QDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL 116
Query: 158 KKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQF 217
K G SI S Y
Sbjct: 117 KV---GA--SIVFNGSDQC---------FIAK----------PNSFAYT----------- 141
Query: 218 CLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSII 277
SK + + ++L ++ I V+ + P +T ++ I
Sbjct: 142 ---------LSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGIS 192
Query: 278 AASSGAM-----------KADEVAKKAL 294
+ + E+A+ +
Sbjct: 193 FDEAQKQEEKEFPLNRIAQPQEIAELVI 220
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-29
Identities = 54/235 (22%), Positives = 85/235 (36%), Gaps = 52/235 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIE--VATYS 93
K R + +TG + GIG A A A GA V +L R+ L E I+ A + + +
Sbjct: 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN 72
Query: 94 ADVRDFDA----VKTALDEAGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFH 148
+ E G +D L+ N + LE ++ ++ VN+ +F
Sbjct: 73 LENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFM 132
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGK-GHGGYHV 207
+ +A LPL+K+ ++ SIA SS G+ G+ G Y
Sbjct: 133 LTRALLPLLKRSEDA---SIAFTSSSVGR--------------------KGRANWGAYG- 168
Query: 208 TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADD-IHVSLIFPPDTETP 261
SKF GL + L E+ + + I P T T
Sbjct: 169 -------------------VSKFATEGLMQTLADELEGVTAVRANSINPGATRTG 204
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-29
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSI--LARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG S GIG ++ + +ARS L++ K+ G D
Sbjct: 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGD 58
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMI 150
+ + +K ++ A G +D LV N GV P + ++ + + D+N ++
Sbjct: 59 ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
ALP +KK G ++ +SS A
Sbjct: 119 GIALPELKKT--NG--NVVFVSSDACN 141
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-29
Identities = 52/263 (19%), Positives = 92/263 (34%), Gaps = 48/263 (18%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ +TG IGLA A + A+EG +++L + + LE+A+ S++ G+E +Y D
Sbjct: 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVR-EKGVEARSYVCD 64
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMI 150
V +AV +D G +D L N G ++ D+ ++ +N+TG+FH++
Sbjct: 65 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 124
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
KA + + G I +S AG Y
Sbjct: 125 KAVSRQMITQNYG---RIVNTASMAGV-------------------KGPPNMAAYG---- 158
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
SK + L E ++ +I V+ I P + E
Sbjct: 159 ----------------TSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVEL 202
Query: 271 PRLTSIIAASSGAMKADEVAKKA 293
S+ + +
Sbjct: 203 QAKVGSQYFSTDPKVVAQQMIGS 225
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-29
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 58/238 (24%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSIL------------ARSGKKLEEAKQSIQLATGI 87
FITG + G G A + A++GA + + S ++L+E + ++ G
Sbjct: 49 AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE-EQGR 107
Query: 88 EVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNI 143
+ ADVRD +++ +DEA G +D+LV N G+ GE+ + + ++ N+
Sbjct: 108 RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNL 167
Query: 144 TGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHG 203
G++H +A LP + +R GG S+ +SS G ++G G
Sbjct: 168 IGAWHACRAVLPSMIERGQGG--SVIFVSSTVG---------LRG----------APGQS 206
Query: 204 GYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
Y ASK G++GL +L EV +I V+ + P T
Sbjct: 207 HY--------------------AASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTE 244
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 5e-29
Identities = 55/278 (19%), Positives = 91/278 (32%), Gaps = 67/278 (24%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
ITGG+SG+G AL + EGARV++L +S ++L E + + G D
Sbjct: 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GGNAVGVVGD 59
Query: 96 VRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRL-----MIDVNITGS 146
VR A + L G +D L+ N G++ ++ + VN+ G
Sbjct: 60 VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYH 206
H +KA LP + G S+ S AG G Y
Sbjct: 120 IHAVKACLPALVSS--RG--SVVFTISNAGF-------------------YPNGGGPLYT 156
Query: 207 VTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266
A+K + GL + E+ A + V+ + P T
Sbjct: 157 --------------------ATKHAVVGLVRQMAFEL-APHVRVNGVAPGGMNTDLRGPS 195
Query: 267 NKRRPRLTSIIAASSGAMKA----------DEVAKKAL 294
+ + + +K+ +E +
Sbjct: 196 SLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYV 233
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 5e-29
Identities = 53/234 (22%), Positives = 86/234 (36%), Gaps = 52/234 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
DR + +TG S GIG A A+ GA V +L R+ +KL + I TG + + D
Sbjct: 11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILD 70
Query: 96 VRDFDA------VKTALDEAGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFH 148
+ + + +D ++ N G+ + Q+ + ++ VN+ +F
Sbjct: 71 LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGK-GHGGYHV 207
+ +A LPL+ K G S+ SS G+ G+ G Y
Sbjct: 131 LTQALLPLLLKSDAG---SLVFTSSSVGR--------------------QGRANWGAYA- 166
Query: 208 TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
ASKF G+ + L E + V+ I P T T
Sbjct: 167 -------------------ASKFATEGMMQVLADEY-QQRLRVNCINPGGTRTA 200
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 6e-29
Identities = 65/269 (24%), Positives = 101/269 (37%), Gaps = 59/269 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ V +TGG+ GIG A+A A+EGA V++ E K+ +A I A + D
Sbjct: 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR----PEGKE---VAEAIGGAFFQVD 57
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ D ++EA G VDVLV N + PG L E R +++VN+T H+
Sbjct: 58 LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA 117
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A ++K GG +I ++S G + + + Y+
Sbjct: 118 LAAREMRK-VGGG--AIVNVASVQGL-------------------FAEQENAAYN----- 150
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
ASK GL L +L ++ I V+ + P T + E P
Sbjct: 151 ---------------ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP 195
Query: 272 RLTSIIAASSGAM------KADEVAKKAL 294
K +EVA+ L
Sbjct: 196 DPERTRRDWEDLHALRRLGKPEEVAEAVL 224
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 6e-29
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K + V +TGG+ GIG A+ + A GA + AR+ +L E Q G +V D
Sbjct: 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ-KKGFQVTGSVCD 71
Query: 96 VRDFDAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
+ + G +D+L+ N G + ++ I N+ ++H+
Sbjct: 72 ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 131
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
+ A PL+K G +I MSS AG
Sbjct: 132 QLAHPLLKASGCG---NIIFMSSIAG 154
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 6e-29
Identities = 55/277 (19%), Positives = 98/277 (35%), Gaps = 53/277 (19%)
Query: 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--T 85
P +++ +DR +TGG SGIG +A GA V I+ R+ KL A Q ++
Sbjct: 2 PGSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN 61
Query: 86 GIEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVF-VPGELEVQSLDEVRLMID 140
G + D+ + D A+D G + +V G G + + R +D
Sbjct: 62 GGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVD 121
Query: 141 VNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGK 200
+N+ G+ +++K A + + GG S +SS A ++ +
Sbjct: 122 LNVNGTMYVLKHAAREMVR-GGGG--SFVGISSIAAS-------------------NTHR 159
Query: 201 GHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
G Y +K + L + E+ A + V+ I P T
Sbjct: 160 WFGAYG--------------------VTKSAVDHLMQLAADELGASWVRVNSIRPGLIRT 199
Query: 261 P---GLEEENKRRPRLTSIIAASSGAMKADEVAKKAL 294
+ E + + ++VA A+
Sbjct: 200 DLVAAITESAELSSDYAMCTPLPRQG-EVEDVANMAM 235
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 6e-29
Identities = 48/230 (20%), Positives = 84/230 (36%), Gaps = 48/230 (20%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSI--LARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ +TGG+ GIG ++ + A +G +++ L + ++ E + I+ A + D
Sbjct: 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIE-AADQKAVFVGLD 61
Query: 96 VRDFD----AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D A+ A ++ G DVLV N G+ L + ++++ + VN+ F I+
Sbjct: 62 VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
AA + G I +S A +G S
Sbjct: 122 AASRKFDELGVKG--KIINAASIAAI----------------------QGFPILSAYS-- 155
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
+KF +RGL +A QE+ V+ P T
Sbjct: 156 ---------------TTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG 190
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 7e-29
Identities = 50/268 (18%), Positives = 89/268 (33%), Gaps = 52/268 (19%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K++ V +TG SGIG A+A + A + V + +L + Q ++ G EV AD
Sbjct: 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR-GMGKEVLGVKAD 64
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMI 150
V V+ + +DVL N G+ + S + ++ VN+ +F+
Sbjct: 65 VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSS 124
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+A +P++ K+ G I +S AG G Y
Sbjct: 125 RAVIPIMLKQGKG---VIVNTASIAGI-------------------RGGFAGAPYT---- 158
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
+K GL GL ++ I + P +T +K
Sbjct: 159 ----------------VAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPS 202
Query: 271 PRLTSIIAASSGAMK----ADEVAKKAL 294
+ +++A +
Sbjct: 203 ELGMRTLTKLMSLSSRLAEPEDIANVIV 230
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 7e-29
Identities = 50/270 (18%), Positives = 101/270 (37%), Gaps = 51/270 (18%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-IEVATYS 93
+K + +TG ++GIG A+A EGA V I R + + E + I+ +
Sbjct: 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 94 ADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
AD+ + +++ VD+L+ N G+F P E ++ + +VNI + ++
Sbjct: 68 ADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSY 127
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
L + +R+ G + ++S+A + H
Sbjct: 128 LKKMIERKEG---RVIFIASEAA-----IMPS------------QEMAHYS--------- 158
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273
A+K L+ +L + ++ V+ I P T T G+E +
Sbjct: 159 -------------ATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVET-------M 198
Query: 274 TSIIAASSGAMKADEVAKKALDGIKSGSFI 303
+ + + + +E K+ + + S I
Sbjct: 199 LNSLYPNEQ-LTIEEAEKRFMKENRPTSII 227
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 8e-29
Identities = 57/266 (21%), Positives = 83/266 (31%), Gaps = 57/266 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R +TGGS GIG A+A K GA V+I + ++ G V D
Sbjct: 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-NGGFAVE---VD 66
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V +V A+ +A G D+L N GV + +E DVN G F +
Sbjct: 67 VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQ 126
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A G I +S A + Y
Sbjct: 127 IACRHFLASNTKG--VIVNTASLAAK-------------------VGAPLLAHYS----- 160
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
ASKF + G +AL +E+ +I V+ + P +T E E
Sbjct: 161 ---------------ASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEA 205
Query: 272 RLTSIIAASSGAMKADEVAKKALDGI 297
L M + V + +
Sbjct: 206 ELR--------GMTPEAVRAEYVSLT 223
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 9e-29
Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 50/266 (18%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITGG+ GIGLA+A + +EGA+V I R E+A +S+ T ++ + D
Sbjct: 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV--GTPDQIQFFQHD 62
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
D D D GPV LV N G+ V +E + E R ++ VN+ G F +
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+ +K + G SI MSS G G G Y+
Sbjct: 123 LGIQRMKNKGLGA--SIINMSSIEG---------FVGDP----------SLGAYN----- 156
Query: 212 ELSGQFCLLGTLLWIASKFGLRGL--AEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269
ASK +R + + AL + D+ V+ + P +TP +++
Sbjct: 157 ---------------ASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA 201
Query: 270 RPRLTSIIAASSGAM-KADEVAKKAL 294
++ G + + +++A +
Sbjct: 202 EEAMSQRTKTPMGHIGEPNDIAYICV 227
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-28
Identities = 63/264 (23%), Positives = 101/264 (38%), Gaps = 51/264 (19%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ V ITGG+ G+G A QA GARV + ++ + + G D
Sbjct: 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLD 59
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + + + A G VD LV N G+ LE +S++ R ++++N+TG F +K
Sbjct: 60 VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+P +K G SI +SS AG + G+ Y
Sbjct: 120 TVIPAMKDAGGG---SIVNISSAAG---------LMGLA----------LTSSYG----- 152
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN-KRR 270
ASK+G+RGL++ E+ D I V+ + P T TP E ++
Sbjct: 153 ---------------ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG 197
Query: 271 PRLTSIIAASSGAMKADEVAKKAL 294
+ E+A +
Sbjct: 198 EGNYPNTPMGRVGNEPGEIAGAVV 221
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-28
Identities = 60/270 (22%), Positives = 93/270 (34%), Gaps = 57/270 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ +TG +GIGLA+A + A EG V G + A I G A D
Sbjct: 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVD 83
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D + +D G VD LV N GV L ++++ +I +N+ G++ K
Sbjct: 84 VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTK 143
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A P + +R G +I +SS AGQ + G G Y
Sbjct: 144 HAAPRMIERGGG---AIVNLSSLAGQ-------------------VAVGGTGAYG----- 176
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
SK G+ L+ E+ + I + + P +TP +
Sbjct: 177 ---------------MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFD 221
Query: 272 RLTSIIAASSGAM-------KADEVAKKAL 294
A S +E+A +
Sbjct: 222 GALGAGGARSMIARLQGRMAAPEEMAGIVV 251
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-28
Identities = 75/268 (27%), Positives = 104/268 (38%), Gaps = 51/268 (19%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG SSGIG A A A+EGA+V + AR+G L E I G E A + D
Sbjct: 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIA-GGGGEAAALAGD 65
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMI 150
V D + ++ A G +D N G GE+ S++ R +D N+T +F
Sbjct: 66 VGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAA 125
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
K +P I GG S+ SS G G G Y
Sbjct: 126 KYQVPAIAA-LGGG--SLTFTSSFVGH--------TAGF----------AGVAPYA---- 160
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
ASK GL GL +AL E+ A I V+ + P T+TP
Sbjct: 161 ----------------ASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGA 204
Query: 271 PRLTSIIAASSGAMK----ADEVAKKAL 294
T A+K +E+A+ AL
Sbjct: 205 APETRGFVEGLHALKRIARPEEIAEAAL 232
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-28
Identities = 54/269 (20%), Positives = 89/269 (33%), Gaps = 56/269 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R +TGG SGIG A A AK GA V + + I G + D
Sbjct: 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GSKAFGVRVD 81
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V ++ +++ G VDVLV N G G + + ++ VN+ G F K
Sbjct: 82 VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSK 141
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+P++++ GG SI +S I Y
Sbjct: 142 YVIPVMRR-NGGG--SIINTTSYTA---------TSAI----------ADRTAYV----- 174
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
ASK + L A+ + + I V+ + P ++P +
Sbjct: 175 ---------------ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAK 219
Query: 272 RLTSIIAASSGAM------KADEVAKKAL 294
+ + + A+E+A+ L
Sbjct: 220 DPAKLRSDFNARAVMDRMGTAEEIAEAML 248
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-28
Identities = 62/275 (22%), Positives = 109/275 (39%), Gaps = 54/275 (19%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSA 94
K + +TG +SGIGL +A A +GA + + ++E+ + + G++V A
Sbjct: 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+ +AV+ +D A G +D+LV N G+ +E ++ ++ +N++ FH
Sbjct: 63 DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
AALP +KK+ G I ++S G L S+ K Y
Sbjct: 123 AAALPHMKKQGFG---RIINIASAHG-----------------LVASANK--SAY----- 155
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
+A+K G+ G + E I + I P TP +E
Sbjct: 156 ---------------VAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE------ 194
Query: 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVP 305
+ S +A +G + + + S F+ P
Sbjct: 195 -KQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 4e-28
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 9/146 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITG +GIG +A A GA V + + IQ G + D
Sbjct: 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ-QLGGQAFACRCD 68
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ + D A G VD+LV N G P ++ + + R ++N+ FH+ +
Sbjct: 69 ITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDM-PMADFRRAYELNVFSFFHLSQ 127
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
P ++K G I ++S A +
Sbjct: 128 LVAPEMEKNGGG---VILTITSMAAE 150
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 5e-28
Identities = 32/237 (13%), Positives = 66/237 (27%), Gaps = 64/237 (27%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+++ + GGS +G + + + + +++
Sbjct: 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-------------HSFTIK 67
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMI 150
+ +K+ +++ VD V G + G + L V+ MID+N+ +F
Sbjct: 68 DSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASA 127
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
L+ + GG L + A + G Y
Sbjct: 128 HIGAKLLNQ---GG--LFVLTGASAAL-------------------NRTSGMIAY----- 158
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIFPPDTETPGLEE 265
A+K + + L E + I P +TP +
Sbjct: 159 ---------------GATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRK 200
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 9e-28
Identities = 49/270 (18%), Positives = 88/270 (32%), Gaps = 65/270 (24%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG + GIG A+ GARV++ R+ + D
Sbjct: 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------------LHLPGD 74
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+R+ G +D++V N GV G + + + L + VN+ F + +
Sbjct: 75 LREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICR 134
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
AA+PL+ G +I ++S G G GH Y
Sbjct: 135 AAIPLMAAAGGG---AIVNVASCWGL-------------------RPGPGHALYC----- 167
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
+K L L + + + I ++ + P + TP L +R
Sbjct: 168 ---------------LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRG 212
Query: 272 RLTSIIAASSGAM-------KADEVAKKAL 294
A G + +++A L
Sbjct: 213 FDPDRAVAELGRTVPLGRIAEPEDIADVVL 242
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 1e-27
Identities = 61/270 (22%), Positives = 96/270 (35%), Gaps = 59/270 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ V +TGG GIG + GARV I + +Q + A I D
Sbjct: 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL-----CD 62
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMI 150
V D VKT + E G +D +V N G P + E S R ++++N+ G++ +
Sbjct: 63 VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
K ALP + R++ G ++ +SS G G Y
Sbjct: 123 KLALPYL--RKSQG--NVINISSLVG---------AIGQ----------AQAVPYV---- 155
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
A+K + + +AL + + V+ I P + TP EE
Sbjct: 156 ----------------ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM 199
Query: 271 PRLTSIIAASSGAM------KADEVAKKAL 294
P + I A + EV A+
Sbjct: 200 PDPRASIREGMLAQPLGRMGQPAEVGAAAV 229
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 107 bits (271), Expect = 1e-27
Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 55/266 (20%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG SSG GLA+A + G RV+ L S + LEE ++ A +V ADV D
Sbjct: 5 AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE 64
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVP---GELEVQSLDEVRLMIDVNITGSFHMIKA 152
V A+ G +DVLV N G+ G L +++ ++ VN+ G F +A
Sbjct: 65 GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRA 124
Query: 153 ALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRE 212
LP + + G I ++S A + G Y
Sbjct: 125 VLPHMLLQGAG---VIVNIASVASL-------------------VAFPGRSAYT------ 156
Query: 213 LSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLEEENKR 269
SK + L +++ + I + + P ETP ++ +
Sbjct: 157 --------------TSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPEL 202
Query: 270 RPRLTSIIAASSGAM-KADEVAKKAL 294
R ++ + I + A +VA +
Sbjct: 203 RDQVLARIPQ--KEIGTAAQVADAVM 226
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-27
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+++ +T + GIGLA+A + A++GA V + +R + ++ ++Q G+ V
Sbjct: 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ-GEGLSVTGTVCH 71
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMI 150
V + + + A G VD+LV N V G + + + ++ VN+ + M
Sbjct: 72 VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMT 131
Query: 151 KAALPLIKKRQNGGPASIALMSSQAG 176
KA +P ++KR G S+ ++SS
Sbjct: 132 KAVVPEMEKRGGG---SVLIVSSVGA 154
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-27
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 36 KDRHVFITG--GSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATY 92
K + V +TG G G+G+ A A+ GA V+I A + EE + ++ GI+ Y
Sbjct: 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAY 78
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
V +++ + + + G +D + N G + S++ ++ V++ G+FH
Sbjct: 79 KCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFH 138
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAG 176
KA K+R G S+ + +S +G
Sbjct: 139 CAKAVGHHFKERGTG---SLVITASMSG 163
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-27
Identities = 60/274 (21%), Positives = 95/274 (34%), Gaps = 61/274 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIE--VATYSADVR 97
ITG S+GIG A A A+EGA+V+I R ++LEE +Q I A E V + ADV
Sbjct: 9 AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 98 DFDAVKTALDEA----GPVDVLVVNQGVFVPGE----LEVQSLDEVRLMIDVNITGSFHM 149
L G +D+LV N G +P QS++ +++N+ +
Sbjct: 69 TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIAL 128
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
K A+P + G I +SS A G+ + Y
Sbjct: 129 TKKAVPHLSST--KG--EIVNISSIAS-----------GL-------HATPDFPYYS--- 163
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP-----GLE 264
+K + ++I I V+ I P T G+
Sbjct: 164 -----------------IAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMP 206
Query: 265 EENKRRPRLTSIIAASSGAM----KADEVAKKAL 294
EE ++ T + ++A+
Sbjct: 207 EETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA 240
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-27
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ----LATGIEVAT 91
+ + +TGG++GIG A+ + + G+ V I +R ++L+ A +Q V
Sbjct: 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 76
Query: 92 YSADVRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF 147
++R+ + V K+ LD G ++ LV N G E S +++ N+TG+F
Sbjct: 77 IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 136
Query: 148 HMIKAALPLIKKRQNGGPASIALMSS 173
+M KA K G SI +
Sbjct: 137 YMCKAVYSSWMKEHGG---SIVNIIV 159
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 4e-27
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--TGIEVATYS 93
++ V ITG S+GIG A A+EGA V+I RS ++LEE +Q I + + +V +
Sbjct: 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRL----MIDVNITG 145
ADV D ++ G +DVLV N G +P D+ + +N+
Sbjct: 65 ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSS 173
M K P + G I +SS
Sbjct: 125 VIEMTKKVKPHLVAS--KG--EIVNVSS 148
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 4e-27
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K + +TG +SGIGL +A A+ GA + + A I G++ + AD
Sbjct: 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIA-RHGVKAVHHPAD 59
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ D ++ A G VD+LV N G+ +E L+ +I +N++ FH +
Sbjct: 60 LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTR 119
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
ALP ++ R G I ++S G
Sbjct: 120 LALPGMRARNWG---RIINIASVHGL 142
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 4e-27
Identities = 57/274 (20%), Positives = 95/274 (34%), Gaps = 69/274 (25%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
D+ +TGGSSGIGLA+ + GA+V ++ K + D
Sbjct: 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK-----------ID 61
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + + VK A+++ G +D+LV N G+ L + + R +IDVN+ GS+ M K
Sbjct: 62 VTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAK 121
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+P++ G SI ++S ++ K Y
Sbjct: 122 YTIPVMLA-IGHG--SIINIASVQSY-------------------AATKNAAAYV----- 154
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
SK L GL ++ + A I + + P TP + + K
Sbjct: 155 ---------------TSKHALLGLTRSVAIDY-APKIRCNAVCPGTIMTPMVIKAAKMEV 198
Query: 272 RLTSIIAASSGAM-----------KADEVAKKAL 294
+ +EVA+
Sbjct: 199 GEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVA 232
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 5e-27
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+++ +TG GIG A A A+EGA V + + + E + I A G + + D
Sbjct: 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV-ADGGTAISVAVD 66
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVP---GELEVQSLDEVRLMIDVNITGSFH 148
V D ++ K D G +D LV N +F L + + + VN+ G+
Sbjct: 67 VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALW 126
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+A + KR G +I SS A
Sbjct: 127 CTRAVYKKMTKRGGG---AIVNQSSTAAW 152
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 6e-27
Identities = 54/238 (22%), Positives = 91/238 (38%), Gaps = 59/238 (24%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGK------------KLEEAKQSIQLATGI 87
ITGG+ G+G + A A+ GA ++I R L E ++ TG
Sbjct: 13 ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE-KTGR 71
Query: 88 EVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNI 143
+ DV+D A+++ + EA G +D+ + N G+ L + +I N+
Sbjct: 72 RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNL 131
Query: 144 TGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHG 203
TG+F+ I A P + K +N G I +SS G
Sbjct: 132 TGTFNTIAAVAPGMIK-RNYG--RIVTVSSMLG---------HSA----------NFAQA 169
Query: 204 GYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
Y ++SK+G+ GL + +++ I V+ + P + ETP
Sbjct: 170 SY--------------------VSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETP 207
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 8e-27
Identities = 45/275 (16%), Positives = 85/275 (30%), Gaps = 62/275 (22%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYS 93
+ + +TG + GIG A A +GA+V+++ + + + K ++ + +
Sbjct: 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV D ++ + G +D+LV N G V + + +N+
Sbjct: 65 CDVADQQQLRDTFRKVVDHFGRLDILVNNAG--------VNNEKNWEKTLQINLVSVISG 116
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
L + K+ G I MSS AG Y
Sbjct: 117 TYLGLDYMSKQNGGEGGIIINMSSLAGL-------------------MPVAQQPVYC--- 154
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGL--AEALQQEVIADDIHVSLIFPPDTETPGLEE-- 265
ASK G+ G + AL ++ + ++ I P T LE
Sbjct: 155 -----------------ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIE 197
Query: 266 ENKRRPRLTSIIAASSGAM------KADEVAKKAL 294
+ + + + +A +
Sbjct: 198 KEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI 232
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-26
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + F+TG SSGIGLA+A A G V AR K + A ++ A G +V S D
Sbjct: 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR-AAGHDVDGSSCD 81
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D V A++ GP+ +LV + G GE ++D N+TG F + +
Sbjct: 82 VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTR 141
Query: 152 AALPLIK-KRQNGGPASIALMSSQAGQ 177
L + G I ++S G+
Sbjct: 142 EVLRAGGMREAGWG--RIVNIASTGGK 166
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-26
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--TGIEVATYS 93
+ V ITG S+GIG + A AKEGA+V+I R+ +LEE KQ I A ++
Sbjct: 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEV--QSLDEVRLMIDVNITGSF 147
ADV + ++ G +D+LV N G + Q ++ + +N
Sbjct: 85 ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144
Query: 148 HMIKAALPLIKKRQNGGPASIALMSS 173
M + + K G I +SS
Sbjct: 145 EMTQKTKEHLIKT--KG--EIVNVSS 166
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-26
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ +TG + G+G A A A GARV + L E+ ++ G + + D
Sbjct: 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT-RKGYDAHGVAFD 66
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D A++ A + VD+L+ N G+ + L+ + +ID N+T +F + +
Sbjct: 67 VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSR 126
Query: 152 AALPLIKKRQNGGP----ASIALMSSQAG 176
+A + R +GG S+ S A
Sbjct: 127 SAAKRMIARNSGGKIINIGSL--TSQAAR 153
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-26
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 36 KDRHVFITGGS-SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
K + V +T + +GIG A +A EGA V I ++L E + + V
Sbjct: 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVC 80
Query: 95 DVRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV +AV +++AG +DVLV N G+ + + +E +++V +T
Sbjct: 81 DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRAT 140
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
+AAL + +GG I +S G
Sbjct: 141 RAALRYFRGVDHGG--VIVNNASVLGW 165
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 2e-26
Identities = 59/268 (22%), Positives = 98/268 (36%), Gaps = 65/268 (24%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ++GG+ G+G + EGA+V ++ + + D
Sbjct: 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL----ADAARYVHLD 61
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V K A+D A G + VLV N G+ G +E +L E + ++DVN+TG F I+
Sbjct: 62 VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 121
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A + +K+ G SI +SS G + G GY
Sbjct: 122 AVVKPMKEAGRG---SIINISSIEG---------LAG----------TVACHGYT----- 154
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLEEENK 268
A+KF +RGL ++ E+ I V+ I P +TP + E+
Sbjct: 155 ---------------ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF 199
Query: 269 RRP--RLTSIIAASSGAMKADEVAKKAL 294
+ R + EV+ +
Sbjct: 200 QTALGRA--------A--EPVEVSNLVV 217
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-26
Identities = 35/229 (15%), Positives = 60/229 (26%), Gaps = 52/229 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ R V + GG +G V+ + EEA S+ + +
Sbjct: 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN--EEASASVIVKMTDSFTEQADQ 63
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMIKAAL 154
V L VD ++ G + G LM +I S A
Sbjct: 64 VTAEVG---KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLAT 120
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
+K+ GG + L ++A G GY
Sbjct: 121 KHLKE---GG--LLTLAGAKAAL-------------------DGTPGMIGY--------- 147
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIFPPDTETP 261
+K + L ++L + + + P +TP
Sbjct: 148 -----------GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 185
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 2e-26
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSA 94
DR V ITGG SG+G A A + A EGA++S++ S + LE +K ++ + A EV T A
Sbjct: 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 71
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHM 149
DV D V+ + G +D N G+ E + E ++ +N+ G F
Sbjct: 72 DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 131
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAG 176
++ L +++++ +G + +S G
Sbjct: 132 LEKVLKIMREQGSG---MVVNTASVGG 155
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-26
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TGG+SG+GL + EGA+V+ + ++ + G D
Sbjct: 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHD 60
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + G ++VLV N G+ +PG++E L++ ++ +N F +
Sbjct: 61 VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120
Query: 152 AALPLIKKRQNGGPASIALMSSQAG 176
+ +K+ GG SI M+S +
Sbjct: 121 QGIAAMKE--TGG--SIINMASVSS 141
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-26
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSA 94
K + V ITG S GIGLA A A+ GA+V + ++ ++E S++ A G + A ++A
Sbjct: 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMR-ADGGDAAFFAA 64
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHM 149
D+ +A + +DE G +DVL+ N G V L ++D NI
Sbjct: 65 DLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMT 124
Query: 150 IKAALPLIKKRQNGGPA--SIALMSSQAGQ 177
K ALP + ++ S AG
Sbjct: 125 TKFALPHLAAAAKASGQTSAVISTGSIAGH 154
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-26
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ R V +TGG+ GIG +A A+ GA V++ RS ++ + +V D
Sbjct: 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTD 68
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D A++E G +DV+ N GVF L + +++ + VN+ G+F+ ++
Sbjct: 69 VSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQ 128
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
A L + +G + L SS G
Sbjct: 129 ACLDALIASGSG---RVVLTSSITGP 151
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 4e-26
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+TG SGIGL + A GAR+ ++ R L+ A Q + A AD
Sbjct: 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVAD 66
Query: 96 VRDFDAVKTALDEA---GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
V D +A+ A EA PV +LV + G+ + R ++ VN+ G F +A
Sbjct: 67 VTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRA 126
Query: 153 ALPLIKKRQNGGPASIALMSSQAG 176
+ R G ++ MS
Sbjct: 127 FGRAMVARGAGAIVNLGSMSGTIV 150
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 4e-26
Identities = 57/274 (20%), Positives = 96/274 (35%), Gaps = 70/274 (25%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+D+ V +TG S GIG A+A + EG++V L+ + D
Sbjct: 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY------------DHIECD 54
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + D VK ++D G + VLV N G+ G++E S+ E R +IDVN+ G ++ K
Sbjct: 55 VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 114
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A+P + + SI +SS K Y
Sbjct: 115 FAIPYMIR-SRDP--SIVNISSVQA---------SIIT----------KNASAYV----- 147
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
SK + GL +++ + A + + + P +TP + + +
Sbjct: 148 ---------------TSKHAVIGLTKSIALDY-APLLRCNAVCPATIDTPLVRKAAELEV 191
Query: 272 RLTSIIAASSGAM-----------KADEVAKKAL 294
+ + K EVA
Sbjct: 192 GSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVA 225
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 5e-26
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
D +TG ++GIG A+A AK GA V + + E +I+ G + +
Sbjct: 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR-QAGGKAIGLECN 69
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D K ALD+ G + VLV N G P ++ + + +N+ F + +
Sbjct: 70 VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDM-PMSDFEWAFKLNLFSLFRLSQ 128
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
A P ++K G +I +SS AG+
Sbjct: 129 LAAPHMQKAGGG---AILNISSMAGE 151
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 6e-26
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
KD+ ITGG++GIG A+A + A EGA ++I EA+ +I+ G V T D
Sbjct: 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIR-NLGRRVLTVKCD 62
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V V K + G D+LV N G++ + + ++ + ++N+ F M K
Sbjct: 63 VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 122
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
A +P +K+ G I ++S
Sbjct: 123 AFVPGMKRNGWG---RIINLTSTTYW 145
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 7e-26
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSA 94
+ + V ITG S+G+G ++A + A E A+V + RS + + + I+ G E
Sbjct: 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK-KVGGEAIAVKG 64
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV V + A G +DV++ N G+ P SL + +ID N+TG+F
Sbjct: 65 DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
+ A+ + G ++ MSS +
Sbjct: 125 REAIKYFVENDIKG--TVINMSSVHEK 149
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 8e-26
Identities = 54/236 (22%), Positives = 83/236 (35%), Gaps = 49/236 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + ITG SG G +A + AK GA+V I+ R E I G +AD
Sbjct: 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GDAALAVAAD 63
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGV-FVPGELEVQSLDEVRLMIDVNITGSFHMI 150
+ V A++ A G VD+LV N G+ P E+ +E ++ VN+ G + M
Sbjct: 64 ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 151 KAALPLIKKRQNGG-PASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
+P K+ G I ++S Y+
Sbjct: 124 SKLIPHFKENGAKGQECVILNVASTGAG-------------------RPRPNLAWYN--- 161
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
A+K + + +AL E+ I V + P ETP L
Sbjct: 162 -----------------ATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTT 200
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 2e-25
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R V +TGG+ GIG +A A+ GA V++ ARS ++L + V D
Sbjct: 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLD 99
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D + +T +D G +DV+ N G+F L+ + +++ ++DVN+ G+ + ++
Sbjct: 100 VSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQ 159
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
A L + G + L SS G
Sbjct: 160 ACLAPLTASGRG---RVILTSSITGP 182
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 3e-25
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ R +TGGS G+G +A A+ G V + +R+ ++ EA Q + G+E + D
Sbjct: 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCD 79
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V +++ VK L+ G +D +V G+ E LDE R +I+VN+ G++++ +
Sbjct: 80 VSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCR 139
Query: 152 AALPLIKKRQNG 163
A L+++ N
Sbjct: 140 EAFSLLRESDNP 151
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 4e-25
Identities = 50/268 (18%), Positives = 88/268 (32%), Gaps = 57/268 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+++ ITG GIGL + A+ GARV + L A S+ G + D
Sbjct: 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVVD 65
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEV--QSLDEVRLMIDVNITGSFHM 149
+ + +V+ +D G +D++ N P ++ V ++D VN G+ M
Sbjct: 66 LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLM 125
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
K A+P + G +I +SS ++ Y
Sbjct: 126 CKYAIPRLISAGGG---AIVNISSATAH-------------------AAYDMSTAYA--- 160
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE---E 266
+K + L + + + + I P TP LE +
Sbjct: 161 -----------------CTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQ 203
Query: 267 NKRRPRLTSIIAASSGAMKADEVAKKAL 294
T +A G + E+A+
Sbjct: 204 PIVDIFATHHLAGRIG--EPHEIAELVC 229
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 4e-25
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSA 94
+R + + G IG A A + A+EGA V + + + A I+ G A
Sbjct: 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE-KLGRSALAIKA 65
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHM 149
D+ + V+ A+ A G + LV G + + ++DVN+T F
Sbjct: 66 DLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLT 125
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQ 177
K ALP + K GG +I SSQAG+
Sbjct: 126 AKTALPKMAK---GG--AIVTFSSQAGR 148
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 4e-25
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+TG +SGIGL +A + KEG RV + AR + L + ++ G+E + D
Sbjct: 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCD 79
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
VR + ++ GPVDVLV N G G + + +++ N+TG F + K
Sbjct: 80 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 139
Query: 152 AALPLIK--KRQNGGPASIALMSSQAGQ 177
L +R G I ++S G+
Sbjct: 140 QVLKAGGMLERGTG---RIVNIASTGGK 164
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-25
Identities = 46/160 (28%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K R +TG SSG+G A+ A+EGA V L EE + G V +A
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNA 60
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGEL----EVQSLDEVRLMIDVNITGS 146
DV + AL A G V LV G ++ +LD + VN+ G+
Sbjct: 61 DVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120
Query: 147 FHMIKAALPLIKKRQNGGP---------ASIALMSSQAGQ 177
F+MI+ A ++ + + ASIA Q GQ
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQ 160
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 1e-24
Identities = 38/229 (16%), Positives = 65/229 (28%), Gaps = 52/229 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
V + GG +G A+ K G V + S ++A +I +
Sbjct: 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN--DQADSNILVDGNKNWTEQEQS 59
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMIKAAL 154
+ + A + + VD + G + G + LMI ++ S K A
Sbjct: 60 ILEQTA---SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLAT 116
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
+K GG + L + A GY
Sbjct: 117 THLKP---GG--LLQLTGAAAA-------------------MGPTPSMIGY--------- 143
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIFPPDTETP 261
+K + L +L + + D+ V I P +TP
Sbjct: 144 -----------GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 181
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 2e-24
Identities = 37/260 (14%), Positives = 66/260 (25%), Gaps = 56/260 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITG S +GL A + + G RV I R+ D
Sbjct: 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE------LRQAGAVALYGD 79
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ +D + +V N ++ + D M V++ + +
Sbjct: 80 FSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPG-EEADNFTRMFSVHMLAPYLINL 138
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
PL+ + I +S + H Y
Sbjct: 139 HCEPLLTASEVA---DIVHISDDVTR-------------------KGSSKHIAYC----- 171
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
A+K GL L + A + V+ I P ++ R
Sbjct: 172 ---------------ATKAGLESLTLSFAARF-APLVKVNGIAPALLMFQPKDDAAYRAN 215
Query: 272 RLTSIIAASSGAMKADEVAK 291
L A+ + +
Sbjct: 216 ALAKSALGIEP--GAEVIYQ 233
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 2e-24
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 24/138 (17%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ + G S +G A+ + ++ A V R + D+ +
Sbjct: 6 ILLIGASGTLGSAVK-ERLEKKAEVITAGRHS------------------GDVTVDITNI 46
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKK 159
D++K ++ G VD +V G L + ++ + I + G +++ + +
Sbjct: 47 DSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND 106
Query: 160 RQNGGPASIALMSSQAGQ 177
+ S L + +
Sbjct: 107 K-----GSFTLTTGIMME 119
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 99.5 bits (249), Expect = 2e-24
Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 13/151 (8%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSI---LARSGKKLEEAKQSIQLATGIEVA 90
+K++ + I GG +G A A E + + A+ + K ++ G +VA
Sbjct: 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE-DQGAKVA 66
Query: 91 TYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGS 146
Y +D+ + + V D A G VD+ + G + + S E M +N +
Sbjct: 67 LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVA 126
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+ IK A + G I +++
Sbjct: 127 YFFIKQAAKHMNP---NG--HIITIATSLLA 152
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 99.5 bits (249), Expect = 2e-24
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSA 94
+++ +TG S G+G A A + A+ G + I ARS K E + I+ G++V A
Sbjct: 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE-KLGVKVLVVKA 61
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
+V +K + G +DV V N V + +++N
Sbjct: 62 NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCA 121
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
+ A L++K G I +SS
Sbjct: 122 QEAAKLMEKNGGG---HIVSISSLGSI 145
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 2e-24
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 23/162 (14%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K ITGG+SG+GLA A + +GA +L E + + G A
Sbjct: 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPA 65
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGEL------EVQSLDEVRLMIDVNIT 144
DV V+TAL A G VDV V G+ V + + +L++ + ++DVN+
Sbjct: 66 DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 125
Query: 145 GSFHMIKAALPLIKKRQNGGP---------ASIALMSSQAGQ 177
G+F++I+ + + + AS+A Q GQ
Sbjct: 126 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ 167
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 3e-24
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + V ITG S GIG L RV +RS K + ++ T + D
Sbjct: 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP----------SADPDIHTVAGD 76
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ + + E G +D LV N GVF+ + ++ + VN+ G FH+ +
Sbjct: 77 ISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQ 136
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
A + K+ +G I +++
Sbjct: 137 RAAAEMLKQGSG---HIVSITTSLVD 159
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 5e-24
Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 22/161 (13%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ ++GG+ G+G A + +G V I + +K + + G S
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVST 83
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGEL-----EVQSLDEVRLMIDVNITG 145
+V D+V A++ A +V + G V + + ID+ + G
Sbjct: 84 NVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143
Query: 146 SFHMIKAALPLIKKRQNGGP---------ASIALMSSQAGQ 177
++++ + I + ASIA Q GQ
Sbjct: 144 TYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ 184
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 8e-24
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
I+D +TGG+SG+GLA + GA+V +L G+ + G +A
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA-------DLGDRARFAAA 59
Query: 95 DVRDFDAVKTALDEA---GPVDVLVVNQGVFVPGEL----EVQSLDEVRLMIDVNITGSF 147
DV D AV +ALD A G + ++V G + V SL R ++D+N+ GSF
Sbjct: 60 DVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119
Query: 148 HMIKAALPLIKKRQNGGP-----------ASIALMSSQAGQ 177
++++ A I K + GP AS+A Q GQ
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQ 160
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 97.2 bits (243), Expect = 1e-23
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 18/146 (12%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
++V++TG GIG A A + GA+V+ ++ AT D
Sbjct: 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-----------QEQYPFATEVMD 54
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D V + L E +D LV G+ G + S ++ + VN+ G+F++ +
Sbjct: 55 VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQ 114
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
+ ++++ G +I ++S A
Sbjct: 115 QTMNQFRRQRGG---AIVTVASDAAH 137
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 1e-23
Identities = 32/149 (21%), Positives = 56/149 (37%), Gaps = 8/149 (5%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSA 94
+TGG GIGL +A A G ++I + + + G V A
Sbjct: 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS-GLGARVIFLRA 86
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGV--FVPGELEVQSLDEVRLMIDVNITGSFH 148
D+ D + + +D G +D LV N G+ V + + ++ VN+ G+
Sbjct: 87 DLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVF 146
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+A L + SI ++S +
Sbjct: 147 FTQAVLKAMLASDARASRSIINITSVSAV 175
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 1e-23
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
V +TGGS GIG A+ AA++G RV + A + + + +I +G E DV +
Sbjct: 29 VLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT-ESGGEAVAIPGDVGN 87
Query: 99 FDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAA 153
+ G +D LV N G+ ++ S++ + M+ VN+TGS A
Sbjct: 88 AADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEA 147
Query: 154 LPLIKKRQNGGPASIALMSSQAGQ 177
+ + + +G +I +SS A
Sbjct: 148 VRRMSRLYSGQGGAIVNVSSMAAI 171
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 1e-23
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R +TG SGIG A+AH A+ GA V R+ ++E I G AD
Sbjct: 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIA-DGGGSAEAVVAD 87
Query: 96 VRDFDAVKT---ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
+ D + L VDVLV N G+ E SL R ++ VN+ ++ + ++
Sbjct: 88 LADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRS 147
Query: 153 ALPLIKKRQNGGPASIA-LMSSQAG 176
+ +G +IA ++S Q G
Sbjct: 148 FGTAMLAHGSGRIVTIASMLSFQGG 172
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 96.4 bits (241), Expect = 2e-23
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG +SGIG A A+EGA + + R + L EA ++ E AD
Sbjct: 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVAD 60
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D AV AL+E G + + GV L+ ++ VN+TGSF + +
Sbjct: 61 VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 120
Query: 152 AALPLIKKRQNGGPASIALMSSQAG 176
A ++++ GG S+ L S AG
Sbjct: 121 KAGEVLEE---GG--SLVLTGSVAG 140
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 2e-23
Identities = 36/158 (22%), Positives = 54/158 (34%), Gaps = 16/158 (10%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
P+ + +TG S GIG +A Q K GA V I R L Q Q + G +
Sbjct: 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ-SLGGQCVPVV 60
Query: 94 ADVRDFDAVK-----TALDEAGPVDVLVVNQGVFVPGELEV-------QSLDEVRLMIDV 141
D V+ ++ G +DVLV N V L + +V
Sbjct: 61 CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNV 120
Query: 142 NITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179
+ G + L+ G I ++SS +
Sbjct: 121 GLRGHYFCSVYGARLMVPAGQG---LIVVISSPGSLQY 155
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 96.4 bits (241), Expect = 3e-23
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ +TG + GIG A+A + A +GA V + + + + A SI G + +AD
Sbjct: 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAIAAD 60
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ D +V G +D+LV N + + LD R +IDVN+TG+F + +
Sbjct: 61 ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTR 120
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQ 177
A ++ G + ++S
Sbjct: 121 AGTDQMRAAGKAG--RVISIASNTFF 144
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 7e-23
Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATY 92
++ +TG S GIG A+A + A +G V I A EE I+ A G + T
Sbjct: 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE-AAGGKALTA 82
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
ADV D AV+ A G VDVLV N G+ + +I VN+ G+F+
Sbjct: 83 QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFN 142
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQ 177
++ A + + GG I MS+
Sbjct: 143 TLREAAQRL---RVGG--RIINMSTSQVG 166
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 8e-23
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 11/151 (7%)
Query: 40 VFITGGSSGIGLALAHQ-AAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
+TGG+ GIGLA+ V + AR + + A Q +Q A G+ + D+ D
Sbjct: 7 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQ-AEGLSPRFHQLDIDD 65
Query: 99 FDAVKTA----LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
+++ E G +DVLV N G+ + + + N G+ + L
Sbjct: 66 LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 125
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185
PLIK + +SS +
Sbjct: 126 PLIKP-----QGRVVNVSSIMSVRALKSCSP 151
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 1e-22
Identities = 53/266 (19%), Positives = 97/266 (36%), Gaps = 54/266 (20%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
ITGG+ GIG A + GA+V I + ++ +I + ++ DV
Sbjct: 19 AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI--GSPDVISFVHCDVTKD 76
Query: 100 DAVKTALDEA----GPVDVLVVNQGVF--VPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
+ V+ +D G +D++ N GV P + ++ + ++D+N+ G+F + K A
Sbjct: 77 EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHA 136
Query: 154 LPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWREL 213
++ + G SI +S + G H Y
Sbjct: 137 ARVMIPAKKG---SIVFTASISS-----------------FTAGEGVSH-VYT------- 168
Query: 214 SGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP----GLEEENKR 269
A+K + GL +L E+ I V+ + P +P ++ R
Sbjct: 169 -------------ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSR 215
Query: 270 RPRLTSIIAASSGAM-KADEVAKKAL 294
L A G + +A++VA
Sbjct: 216 VEELAHQAANLKGTLLRAEDVADAVA 241
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 94.9 bits (237), Expect = 1e-22
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATY 92
+ + F+TGGS GIG A+A + A EGA V++ + ++ + I+ G
Sbjct: 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE-QAGGRAVAI 86
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
AD RD +A++ A+ E G +D+LV + G++ LE ++ + ++ VN F
Sbjct: 87 RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFV 146
Query: 149 MIKAALPLIKKRQNGGPASIALMSS 173
I++A + +GG I + S
Sbjct: 147 AIRSASRHL---GDGG--RIITIGS 166
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 94.9 bits (237), Expect = 2e-22
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI--LARSGKKLEEAKQSIQLATGIEVATYS 93
KDR +TGG SGIG A A A+EGA V+I L + ++ K I+ G +
Sbjct: 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE-ECGRKAVLLP 106
Query: 94 ADVRDF----DAVKTALDEAGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFH 148
D+ D V A + G +D+L + G ++ + ++ + VN+ F
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166
Query: 149 MIKAALPLIKKRQNGGPASIALMSS 173
+ + A+PL+ K G SI SS
Sbjct: 167 ITQEAIPLLPK---GA--SIITTSS 186
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 2e-22
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 11/154 (7%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
RH IT G+ G+G + + +G V++ S E + + AD
Sbjct: 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQAD 65
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHM 149
V + + + A+ G +D L+ N G +V +L DE MI N+T FH+
Sbjct: 66 VTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHL 125
Query: 150 IKAALP-LIKKRQ----NGGPASIALMSSQAGQC 178
+K +P + K+ N G +
Sbjct: 126 LKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRS 159
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 2e-22
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 11/149 (7%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATY 92
P+ + TG GIG +A + + GA V + S K EE ++ G +
Sbjct: 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK-KLGAQGVAI 76
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
AD+ V D+A G +D ++ N G+ V + + + + ++N G F
Sbjct: 77 QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 136
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+ + L + GG I L SS A
Sbjct: 137 VAQQGLKHC---RRGG--RIILTSSIAAV 160
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 2e-22
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATY 92
++ + +TG GIG +A + + G +V + A S + EE +I+ G + A
Sbjct: 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACV 84
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
A+V + + +EA G +D++ N GV G ++ + +E + +N G F
Sbjct: 85 KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 144
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+ + A + + GG + LM S GQ
Sbjct: 145 VAREAYKHL---EIGG--RLILMGSITGQ 168
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 3e-22
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R +TGGS GIG +A + GARV I AR + + + A G + AD
Sbjct: 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS-AYG-DCQAIPAD 85
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ + +D+LV N G LE + ++ +N+T F I+
Sbjct: 86 LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQ 145
Query: 152 AALPLIKKR-QNGGPASIALMSSQAG 176
LPL+++ PA + + S AG
Sbjct: 146 QLLPLLRRSASAENPARVINIGSVAG 171
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 4e-22
Identities = 53/260 (20%), Positives = 96/260 (36%), Gaps = 59/260 (22%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
I+D+ V + S GIG A+A ++EGA V+I AR+ + L+ + +
Sbjct: 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV----------C 66
Query: 95 DVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
D+R + ++ VD+LV+N G G + + ++ + ID +++ L
Sbjct: 67 DLR--KDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 124
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
P +K++ G I ++S + I
Sbjct: 125 PAMKEKGWG---RIVAITSFSVI---------SPI------------------------E 148
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLEEENKRRP 271
+++ L G + L EV I V+ + P TET L E K++
Sbjct: 149 NL------YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQ 202
Query: 272 RLTSIIAASSGAMKADEVAK 291
+ I K +E+A
Sbjct: 203 VESQIPMRRMA--KPEEIAS 220
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 4e-22
Identities = 41/280 (14%), Positives = 76/280 (27%), Gaps = 66/280 (23%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSA 94
+ +TG + IG A+A + + G RV I S + + A
Sbjct: 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQA 81
Query: 95 DVRDFDA--------VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLM-------- 138
D+ + + + + G DVLV N F P L ++
Sbjct: 82 DLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVA 141
Query: 139 --IDVNITGSFHMIKAALPLIKK-----RQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191
I N F + + K + SI +
Sbjct: 142 ELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL--SIVNLCDAMVD-------------- 185
Query: 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVS 251
+ + + + K L GL ++ E+ I V+
Sbjct: 186 --------QPCMAFSLYN-----------------MGKHALVGLTQSAALELAPYGIRVN 220
Query: 252 LIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAK 291
+ P + P E ++ + A A+++A
Sbjct: 221 GVAPGVSLLPVAMGEEEKDKWRRKVPLGRREA-SAEQIAD 259
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 5e-22
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATY 92
+ + +TG GIG A+A + GA+V + A S K E+ I+ A G +
Sbjct: 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK-ALGSDAIAI 73
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
AD+R + D+A G +D+ V N GV G L+ + +E + +N G F
Sbjct: 74 KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFF 133
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+ + A + + GG I L SS +
Sbjct: 134 VAREAYRHLTE---GG--RIVLTSSNTSK 157
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 8e-22
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 29/157 (18%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96
+R +TGG+SG+G A A G RV +L G ++ DV
Sbjct: 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLR-------------REGEDLIYVEGDV 48
Query: 97 RDFDAVKTALDEA---GPVDVLVVNQGVFVPGEL----EVQSLDEVRLMIDVNITGSFHM 149
+ V+ A+ A P+ +V GV + ++ L+ R +++VN+ G+F++
Sbjct: 49 TREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108
Query: 150 IKAALPLIKKRQNGGP---------ASIALMSSQAGQ 177
++ A +++ AS+A Q GQ
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ 145
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 91.8 bits (229), Expect = 9e-22
Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 9/139 (6%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+T G A ++G V S E ++ G R
Sbjct: 6 VTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPER---L 62
Query: 102 VKTALDEAGPVDVLVVNQGVFVPGE---LEVQSLDEVRLMIDVNITGSFHMIKAALPLIK 158
V L +D +V N + P LE S ++R M + ++++A+ ++
Sbjct: 63 VDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLR 122
Query: 159 KRQNGGPASIALMSSQAGQ 177
S+ ++S G+
Sbjct: 123 AAGGA---SVIFITSSVGK 138
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 92.2 bits (230), Expect = 1e-21
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSA 94
K ++V ITGG SGIG A++ AKEGA ++I E KQ ++ G++
Sbjct: 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE-KEGVKCVLLPG 104
Query: 95 DVRDF----DAVKTALDEAGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHM 149
D+ D D V+ + + G +++LV N P + LE + +++ +NI FH+
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV 164
Query: 150 IKAALPLIKKRQNGGPASIALMSS 173
KAAL +K+ G I +S
Sbjct: 165 TKAALSHLKQ---GD--VIINTAS 183
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 9e-21
Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+++ +TG GIG +A AK + V ++R+ K + I+ + G E + Y+ D
Sbjct: 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK-SFGYESSGYAGD 101
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + + L E VD+LV N G+ DE ++ N+ F++ +
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 161
Query: 152 AALPLIKKRQNGGPASIALMSS------QAGQC 178
+ + G I +SS GQ
Sbjct: 162 PISKRMINNRYG---RIINISSIVGLTGNVGQA 191
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 89.1 bits (222), Expect = 1e-20
Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG + GIG A+A + A G+ V I SG++ + + I G++ +
Sbjct: 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMN 65
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ +++ + + +D+LV N G+ SL + ++ VN+TG+F + +
Sbjct: 66 LLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQ 125
Query: 152 AAL-PLIKKR 160
+L +IK+R
Sbjct: 126 NSLRKMIKQR 135
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 88.3 bits (220), Expect = 1e-20
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96
+R +TGGS GIG A+A G RV+I +R+ ++ + + D+
Sbjct: 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---------SLGAVPLPTDL 52
Query: 97 RDFDA---VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D VK AL+ G + VLV V V S +E R ++ +++ +F + +AA
Sbjct: 53 EKDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112
Query: 154 LPLIKKRQNGGPASIALMSSQAG 176
P + + G I +++
Sbjct: 113 APHMAEAGWGRVLFIGSVTTFTA 135
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 88.7 bits (221), Expect = 1e-20
Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
KD+ V ITG + GIG A AKEGAR+ L EA A + D
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA------AEAVGAHPVVMD 57
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D +V AL G +D +V G+ L++ L++ VN+TGSF + K
Sbjct: 58 VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117
Query: 152 AALPLIKKRQNGGPASIALMSSQAG 176
AA ++++ G SI L +S+
Sbjct: 118 AASEAMREKNPG---SIVLTASRVY 139
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 2e-20
Identities = 44/261 (16%), Positives = 82/261 (31%), Gaps = 47/261 (18%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+ I+G ++GIG A G ++ + A AD+
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD------------------AEVIADLS 43
Query: 98 DFDAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
+ K A+ + +D LV+ G+ + ++ VN G+ ++ A
Sbjct: 44 TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDA 96
Query: 153 ALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRE 212
LP +KK + ++SS A ++N L + G
Sbjct: 97 FLPALKKGHQP---AAVVISSVASAHLA--------FDKNPLALALEAGEEAKARAIVEH 145
Query: 213 LSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLEEENKR 269
Q G L + SK L + ++ I P TETP ++ +
Sbjct: 146 AGEQ---GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY 202
Query: 270 RPRLTSIIAASSGAMKADEVA 290
+ + + E+A
Sbjct: 203 GESIAKFVPPMGRRAEPSEMA 223
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 4e-20
Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 15/141 (10%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA 101
+T G+ A + ++ G V+ S K+ +E +
Sbjct: 6 VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-------AFAETYPQLKPMSEQE 58
Query: 102 V----KTALDEAGPVDVLVVNQGVFVPGELEVQ-SLDEVRLMIDVNITGSFHMIKAALPL 156
+ G VDVLV N + + ++++ R ++ F ++ A
Sbjct: 59 PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQ 118
Query: 157 IKKRQNGGPASIALMSSQAGQ 177
+KKR++G I ++S
Sbjct: 119 MKKRKSG---HIIFITSATPF 136
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 4e-20
Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 13/153 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R F+TGG G+G A++ + G V++ + G + Y+ D
Sbjct: 24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVD 83
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V DF++ + L + G VDVL+ N G+ + + ++ ++ F++ K
Sbjct: 84 VADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTK 143
Query: 152 AALPLIKKRQNGGPASIALMSS------QAGQC 178
+ + +R+ G I + S GQ
Sbjct: 144 QFIAGMVERRFG---RIVNIGSVNGSRGAFGQA 173
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 7e-20
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ +TG S GIG A+A + A+ GA V A + E + + G+E +
Sbjct: 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK-QAGLEGRGAVLN 85
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D AV ++ L E G ++VLV N G+ DE +ID N+ F + +
Sbjct: 86 VNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSR 145
Query: 152 AAL-PLIKKR 160
A L P++K R
Sbjct: 146 AVLRPMMKAR 155
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 87.7 bits (217), Expect = 8e-20
Identities = 39/183 (21%), Positives = 65/183 (35%), Gaps = 38/183 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K R +TGG+ GIG + Q + G V + R K EA + ++ + V + D
Sbjct: 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLD 70
Query: 96 VRDFDAVKTAL-----DEAGPVDVLVVNQGVFVPG------------------------- 125
V D A ++L G +D+LV N GV
Sbjct: 71 VTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYE 130
Query: 126 -----ELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180
EL ++ + + +N G + + +PL++ I +SS G
Sbjct: 131 KPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL---SDSPRIVNVSSSTGSLKY 187
Query: 181 IKN 183
+ N
Sbjct: 188 VSN 190
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 8e-20
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
++ +TG S GIG +AH A +GA V A S E+ + S++ G + +
Sbjct: 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK-EKGFKARGLVLN 62
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ D +++ E +D+LV N G+ + S DE + +I+ N++ F M K
Sbjct: 63 ISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSK 122
Query: 152 AAL-PLIKKR 160
+ ++KKR
Sbjct: 123 ECVRGMMKKR 132
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 9e-20
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITG SSGIG A+A K G++V I + +KL+ ++ +
Sbjct: 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----KDNYTIEVCN 68
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL- 154
+ + + + + +D+LV N G+ + +ID+N+ +F + + A+
Sbjct: 69 LANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIK 128
Query: 155 PLIKKR 160
+I+KR
Sbjct: 129 KMIQKR 134
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 1e-19
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 13/153 (8%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R ++TGG GIG ++ + K+G RV Q A G + +
Sbjct: 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGN 71
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D+D+ E G +DVLV N G+ + ++ + +ID N+T F++ K
Sbjct: 72 VGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTK 131
Query: 152 AALPLIKKRQNGGPASIALMSS------QAGQC 178
+ + +R G I +SS Q GQ
Sbjct: 132 QVIDGMVERGWG---RIINISSVNGQKGQFGQT 161
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 1e-19
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILA--RSGKKLEEAKQSIQLATGIEVATYSAD 95
V +TG + GIGL L Q K+ I+A R +K E K V
Sbjct: 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IKDSRVHVLPLT 59
Query: 96 VRDFDAVKTALDEAG------PVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFH 148
V ++ T + + G + +L+ N GV + G + + +DVN T
Sbjct: 60 VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119
Query: 149 MIKAALPLIKK--------RQNGGPASIALMSSQAG 176
+ + LPL+K + + A++ +SS G
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 2e-19
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 27/164 (16%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ------LATGIEV 89
+ +TG SGIG A++ + A EGA V+ +E + +
Sbjct: 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNH 65
Query: 90 ATYSADVRDFDAVKTALDEA-----GPVDVLVVNQGVFVPGEL---EVQSLDEVRLMIDV 141
A + ADV + A + L++ P V+V G+ L D+V I V
Sbjct: 66 AAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKV---IAV 122
Query: 142 NITGSFHMIKAAL-PLIKKRQNGGPASIALMSS------QAGQC 178
N+ G+F + +AA L+ G SI +SS GQ
Sbjct: 123 NLKGTFLVTQAAAQALVSNGCRG---SIINISSIVGKVGNVGQT 163
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 2e-19
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSA 94
DR +TG S GIG A+A + A GA+V++ A S +E +I A G E A
Sbjct: 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA-AAGGEAFAVKA 85
Query: 95 DVRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV V ++ G +DVLV N G+ L D+ + ++D+N+ G F
Sbjct: 86 DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCS 145
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
+AA ++ K+++G I ++S G+
Sbjct: 146 RAAAKIMLKQRSG---RIINIASVVGE 169
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 85.2 bits (212), Expect = 2e-19
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 33/144 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSA 94
+ +TG S GIG ++A Q A+EG V++ A S +K E + I+ A G++ A
Sbjct: 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK-AKGVDSFAIQA 61
Query: 95 DVRDFDAV----KTALDEAGPVDVLVVNQGV-------------FVPGELEVQSLDEVRL 137
+V D D V K + + G +DVLV N G+ + D+V
Sbjct: 62 NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEW----------DDV-- 109
Query: 138 MIDVNITGSFHMIKAAL-PLIKKR 160
ID N+ G F+ I+ A ++++R
Sbjct: 110 -IDTNLKGVFNCIQKATPQMLRQR 132
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 84.8 bits (211), Expect = 3e-19
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSA 94
K + +TG S G+G A+A + GA + + + + L+ + + A GI V
Sbjct: 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFK-AAGINVVVAKG 62
Query: 95 DVRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV++ + V KTA+D G +D+LV N G+ + S + +++ N+ ++
Sbjct: 63 DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCT 122
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQ 177
KA ++ K+++G I ++S AG
Sbjct: 123 KAVSKIMLKQKSG---KIINITSIAGI 146
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 84.8 bits (211), Expect = 3e-19
Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
V +TG S GIG A+A K G +V + ARS K EE + I+ A G + T+ DV
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIE-AYGGQAITFGGDVSK 62
Query: 99 FDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
V KTA+D G +DV+V N G+ L + +ID+N+TG F +AA
Sbjct: 63 EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122
Query: 155 PLIKKRQNGGPASIALMSSQAGQ 177
++ K++ G I ++S G
Sbjct: 123 KIMMKKRKG---RIINIASVVGL 142
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 84.8 bits (211), Expect = 3e-19
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 35/160 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSA 94
K + +TG S GIG A+A AK+GA V + A + +K E I+ G + A
Sbjct: 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK-KLGSDAIAVRA 61
Query: 95 DVRDFDAV----KTALDEAGPVDVLVVNQGV-------------FVPGELEVQSLDEVRL 137
DV + + V K +D G VD+LV N GV + D V
Sbjct: 62 DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEW----------DTV-- 109
Query: 138 MIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
I+ N+ G F KA + ++++G I ++S G
Sbjct: 110 -INTNLKGVFLCTKAVSRFMMRQRHG---RIVNIASVVGV 145
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 5e-19
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSI---------LARSGKKLEEAKQSIQL 83
+ KD+ V ITG G+G + + AK GA+V + + K + I
Sbjct: 4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK 63
Query: 84 ATGIEVATYSADVRDFDA-VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVN 142
G+ VA Y +V D D V+TA+ G V V++ N G+ ++ + + +L+IDV+
Sbjct: 64 NGGVAVADY-NNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVH 122
Query: 143 ITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176
+ G+F + KAA P +K Q G I SS AG
Sbjct: 123 LNGAFAVTKAAWPYFQK-QKYG--RIVNTSSPAG 153
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 2e-15
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 27 RPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG 86
+ +KD+ V ITG +G+G A AK GA+V + + I+ A G
Sbjct: 312 ASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGG 369
Query: 87 IEVATYSADVRDFDA--VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIT 144
DV +K +D+ G +D+LV N G+ S E + V++
Sbjct: 370 EAWPDQ-HDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLI 428
Query: 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176
G+F++ + A P + + G I ++S +G
Sbjct: 429 GTFNLSRLAWPYFVE-KQFG--RIINITSTSG 457
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 6e-19
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 17/155 (10%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATY 92
+K + +TG S GIG A+A + A +GA V+I ++ EE IQ + G +
Sbjct: 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ-SNGGSAFSI 62
Query: 93 SADVRDFDAVKTALDEA----------GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVN 142
A++ V+ D+L+ N G+ +E + M+ VN
Sbjct: 63 GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 122
Query: 143 ITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
F +I+ AL + ++ I +SS A +
Sbjct: 123 AKAPFFIIQQALSRL---RDNS--RIINISSAATR 152
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 6e-19
Identities = 42/274 (15%), Positives = 73/274 (26%), Gaps = 66/274 (24%)
Query: 42 ITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFD 100
ITGG+ IG ++A + ++G RV + S + + A D+
Sbjct: 16 ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSS 75
Query: 101 AV--------KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRL-----------MIDV 141
++ + G DVLV N + P L +
Sbjct: 76 SLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGS 135
Query: 142 NITGSFHMIKAALPLIKK----RQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197
N +I+A + R S+ + +
Sbjct: 136 NAVAPLFLIRAFARRQGEGGAWRSRNL--SVVNLCDAMT-------------------DL 174
Query: 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257
G Y +K L GL A E+ I V+ + P
Sbjct: 175 PLPGFCVY--------------------TMAKHALGGLTRAAALELAPRHIRVNAVAPGL 214
Query: 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAK 291
+ P + + + S A A ++A
Sbjct: 215 SLLPPAMPQETQEEYRRKVPLGQSEA-SAAQIAD 247
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 7e-19
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 32/142 (22%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADV 96
R ITG S GIG A+A + A++G ++I ++ +K EE + + VA A++
Sbjct: 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61
Query: 97 RDFDAV----KTALDEAGPVDVLVVNQGV-------------FVPGELEVQSLDEVRLMI 139
+ +A A + G +D LV N G+ + + V +
Sbjct: 62 LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDW----------EAV---L 108
Query: 140 DVNITGSFHMIKAAL-PLIKKR 160
+ N++ F + A+ ++K R
Sbjct: 109 EANLSAVFRTTREAVKLMMKAR 130
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 83.7 bits (208), Expect = 7e-19
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG S GIG A+A A+ GA+V A S + + G + +
Sbjct: 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDNGKGMALN 63
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + +++ K DE G VD+LV N G+ L +E +++ N+T F + K
Sbjct: 64 VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 123
Query: 152 AAL-PLIKKR 160
A L ++KKR
Sbjct: 124 AVLRGMMKKR 133
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 8e-19
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
R +TG + GIG A+A +GA V + KL+E + G +V +SA+
Sbjct: 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GKDVFVFSAN 81
Query: 96 VRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ D ++ + A E +D+LV N G+ G + ++ VN+T + + +
Sbjct: 82 LSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTR 141
Query: 152 AAL-PLIKKR 160
+ ++++R
Sbjct: 142 ELIHSMMRRR 151
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 3e-18
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSI---------LARSGKKLEEAKQSIQL 83
+ R V +TG G+G A A A+ GA V + + + ++ + I+
Sbjct: 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR 64
Query: 84 ATGIEVATYSADVRDFDA-VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVN 142
G VA Y V + VKTALD G +DV+V N G+ S ++ ++ V+
Sbjct: 65 RGGKAVANY-DSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVH 123
Query: 143 ITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176
+ GSF + +AA +KK+ G I + +S +G
Sbjct: 124 LRGSFQVTRAAWDHMKKQNYG---RIIMTASASG 154
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 3e-18
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 20/157 (12%)
Query: 38 RHVFITGGSSGIGLALAHQ---AAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ ITG + G+GL L + + R+ ++ +E + + + I +
Sbjct: 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHI--LEI 79
Query: 95 DVRDFDAVKTALDE------AGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSF 147
D+R+FDA + + ++VL N G+ + E+ + N
Sbjct: 80 DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139
Query: 148 HMIKAALPLIKK--------RQNGGPASIALMSSQAG 176
+ KA LPL+KK G A+I MSS G
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 81.0 bits (201), Expect = 7e-18
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 27/162 (16%)
Query: 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGI 87
+ + P R V +TGG+ GIGLA+A + A +G +V++ R +
Sbjct: 6 TEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--------- 56
Query: 88 EVATYSADVRDFDAV----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNI 143
DV D DAV + GPV+VLV N G+ L + ++ +I+ N+
Sbjct: 57 ---GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL 113
Query: 144 TGSFHMIKAAL-PLIKKRQNGGPASIALMSS------QAGQC 178
TG+F + + A + + + + + S Q
Sbjct: 114 TGAFRVAQRASRSMQRNKF----GRMIFIGSVSGLWGIGNQA 151
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 7e-18
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 27/151 (17%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
R V +TGG+ GIGLA+A A G +V+I RSG+ E D+
Sbjct: 22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL------------AVKCDIT 69
Query: 98 DFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D + V+ A E GPV+VL+ N GV L S ++ +++ N+TG+F ++K A
Sbjct: 70 DTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRA 129
Query: 154 L-PLIKKRQNGGPASIALMSS------QAGQ 177
+++ ++ + L+SS AGQ
Sbjct: 130 NRAMLRAKK----GRVVLISSVVGLLGSAGQ 156
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-17
Identities = 46/237 (19%), Positives = 72/237 (30%), Gaps = 58/237 (24%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ ITG +SGIG AL A+ G V + R +E + G E A +A +
Sbjct: 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEAD---LSTPGGRETA-VAAVLDRC 59
Query: 100 D---------AVKTALDEAGPVDVLVVNQGVF--VPGELEVQSLDEVRLMIDVNITGSFH 148
A + V V GV + G E S + + V +
Sbjct: 60 GGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQ 119
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVT 208
A LP+++ G A A Q G+ H Y
Sbjct: 120 PGAAELPMVEAMLAG---DEARAIELAEQ--------------------QGQTHLAYA-- 154
Query: 209 SWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
SK+ + LA + + ++++ P ETP L+
Sbjct: 155 ------------------GSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA 193
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 6e-17
Identities = 47/159 (29%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARV----------SILARSGKKLEEAKQSIQLAT 85
R V +TG GIG A A A EGARV A G + I A
Sbjct: 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG 85
Query: 86 GIEVATYSADVRDFDA----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDV 141
G VA ++V D+D ++TA++ G +DVLV N G+ + S +E +I V
Sbjct: 86 GEAVADG-SNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144
Query: 142 NITGSFHMIKAALPLIKKRQNGGP---ASIALMSSQAGQ 177
++ G F ++ A + G I SS AG
Sbjct: 145 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 81.0 bits (200), Expect = 6e-17
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 26 VRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSI------LARSGKKLEEAKQ 79
+ ++ R +TG +G+G A A+ GA+V + + G A
Sbjct: 8 MSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI 67
Query: 80 ---SIQLATGIEVATYSADVRDFDA-VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEV 135
I+ A G VA Y V D ++TA+ G VD+LV N G+ L S +
Sbjct: 68 VVDEIRKAGGEAVADY-NSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDW 126
Query: 136 RLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176
L+ DV++ GSF +AA P +KK QN G I + SS +G
Sbjct: 127 NLVNDVHLKGSFKCTQAAFPYMKK-QNYG--RIIMTSSNSG 164
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 6e-17
Identities = 32/179 (17%), Positives = 46/179 (25%), Gaps = 43/179 (24%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
+TG + +G ++A EG V + RS + ++ T AD+ +
Sbjct: 12 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 71
Query: 99 FDA---------------------VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDE--- 134
V G DVLV N F P L D
Sbjct: 72 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 131
Query: 135 -----------VRLMIDVNITGSFHMIKAALP-----LIKKRQNGGPASIALMSSQAGQ 177
+ N + +IKA K R SI M
Sbjct: 132 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNY--SIINMVDAMTN 188
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 1e-16
Identities = 31/179 (17%), Positives = 45/179 (25%), Gaps = 43/179 (24%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
+TG + +G ++A EG V + RS + ++ T AD+ +
Sbjct: 49 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 108
Query: 99 FDA---------------------VKTALDEAGPVDVLVVNQGVFVPGEL---------- 127
V G DVLV N F P L
Sbjct: 109 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 168
Query: 128 ----EVQSLDEVRLMIDVNITGSFHMIKAALP-----LIKKRQNGGPASIALMSSQAGQ 177
+ N + +IKA K R SI M
Sbjct: 169 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNY--SIINMVDAMTN 225
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 38/161 (23%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
P+ + +TG + GIG +A A++GA V + G A+ ++A + +
Sbjct: 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG----AAEDLKRVADKVGGTALT 265
Query: 94 ADVRDFDAVKTALDEA-----GPVDVLVVNQGV-------------FVPGELEVQSLDEV 135
DV DAV G VD+LV N G+ + D V
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRW----------DAV 315
Query: 136 RLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176
I VN+ + + + + G + +SS AG
Sbjct: 316 ---IAVNLLAPQRLTEGLVGNGTIGEGG---RVIGLSSMAG 350
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 3e-15
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Query: 24 LIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL 83
+ + K +K + + G+ +G+ A A EGA V + R K + A S+
Sbjct: 106 VALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK 165
Query: 84 ATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ--GVFVPGELEVQSLDEVRLMIDV 141
+ V +A+ D + A+ A + G+ + + Q+ + ++ D
Sbjct: 166 RFKVNVT--AAETADDASRAEAVKGA---HFVFTAGAIGLELLPQAAWQNESSIEIVADY 220
Query: 142 N 142
N
Sbjct: 221 N 221
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 2e-12
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Query: 30 PVRIP-IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIE 88
+P R V ITG +SG+G A + A+ GA V + R +K E A +++ +
Sbjct: 8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----AGQ 63
Query: 89 VATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
V D++D +V+ D DVL+ N G+ ++D I N G F
Sbjct: 64 VEVRELDLQDLSSVRRFADGVSGADVLINNAGIMAVPYAL--TVDGFESQIGTNHLGHFA 121
Query: 149 MIKAALPLIKKR 160
+ LP + R
Sbjct: 122 LTNLLLPRLTDR 133
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 8e-08
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 24 LIVRPKPVRIPIKDRHVFITGGSSGIGLALA-HQAAKEGAR-VSILARSGKKLEEAKQSI 81
L++ PV V +TGG+ +G +A H + G R + +++R G A + +
Sbjct: 519 LVLTMPPVWDA--AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELV 576
Query: 82 QL--ATGIEVATYSADVRDFDAVKTALDEA 109
A G EV+ + DV D + + L
Sbjct: 577 AQLTAYGAEVSLQACDVADRETLAKVLASI 606
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 8e-08
Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 16/115 (13%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ G + +G A G + ++ R +++ E A++ D
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-----YLEPECRV--AEMLDH 68
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
++ AL +D V+ + P + + + + A L
Sbjct: 69 AGLERALRG---LDG-VIFSAGYYP-----SRPRRWQEEVASALGQTNPFYAACL 114
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 2e-07
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 21/118 (17%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K + + + G S +G AL ++A G V+ + R +K++ + +++ D
Sbjct: 3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKA--------D 54
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
V D V D ++ + + D I +I
Sbjct: 55 VSSLDEVCEVCKG---ADAVISAFN-PGWNNPD---------IYDETIKVYLTIIDGV 99
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 3e-07
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSIL--ARSGKK--LEEAKQSIQLATGI 87
++ + ITG + IG L + K V L +G + L+E K +
Sbjct: 20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWS 79
Query: 88 EVATYSADVRDFDAVKTALDEAGPVDVLVVNQG--VFVPGELEVQSLDEVRLMIDVNITG 145
D+RD + + VD V++Q VP +S+ + NITG
Sbjct: 80 RFCFIEGDIRDLTTCEQVMKG---VDH-VLHQAALGSVP-----RSIVDPITTNATNITG 130
Query: 146 SFHMIKAA 153
+++ AA
Sbjct: 131 FLNILHAA 138
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 1e-06
Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 26/155 (16%)
Query: 1 MADLSFLGFLVLLLPLTLLLLLYLIVRPKPVRIPIK-----DRHVFITGGSSGIGLALAH 55
MA +G +V+ + + P + K + ITGG G GL LA
Sbjct: 1843 MAQGKHIGKVVIQVREEEQGPAPRGLPPIALTGLSKTFCPPHKSYVITGGLGGFGLQLAQ 1902
Query: 56 QAAKEGARVSILA-RSGKKLEEAKQSIQL--ATGIEVATYSADVRDFDAVKTALDEA--- 109
GA+ +L RSG + + ++ G++V +++ D ++ + EA
Sbjct: 1903 WLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962
Query: 110 GPVDVLVVNQGVF---------VPGELEVQSLDEV 135
GPV GVF V + +V
Sbjct: 1963 GPVG------GVFNLAMVLRDAVLENQTPEFFQDV 1991
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-06
Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ I G + GL QA + G V++L R +L + V DV
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----EGPRPAHVVV--GDVLQA 58
Query: 100 DAVKTALDEAGPVDVLVVNQG 120
V + AG D ++V G
Sbjct: 59 ADVDKTV--AG-QDAVIVLLG 76
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 15/128 (11%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSIL--ARSGKK--LEEAKQSIQLATGI 87
+P + + ITG + IG L K +V L +G + L+E + +
Sbjct: 22 ELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS 81
Query: 88 EVATYSADVRDFDAVKTALDEAGPVDVLVVNQG--VFVPGELEVQSLDEVRLMIDVNITG 145
D+R+ D A VD V++Q VP +S+++ NI G
Sbjct: 82 NFKFIQGDIRNLDDCNNACAG---VDY-VLHQAALGSVP-----RSINDPITSNATNIDG 132
Query: 146 SFHMIKAA 153
+M+ AA
Sbjct: 133 FLNMLIAA 140
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 21/116 (18%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+ + +TG + +G + + A + + S L+ A + + D+
Sbjct: 4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLS--PLDPAGPNEECVQC--------DLA 53
Query: 98 DFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D +AV + D +V+ G G + +++ + NI G +++ +AA
Sbjct: 54 DANAVNAMVAG---CDG-IVHLG----GISVEKPFEQI---LQGNIIGLYNLYEAA 98
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 7e-06
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQL--ATGIEVATYS 93
V +TGG+ G+G +A A+ GA +L RSG + A + + A G +
Sbjct: 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 285
Query: 94 ADVRDFDAVKTALDE---AGPVDVLVVNQGVFVPGELEVQSLDEVR 136
DV D ++V+ L P+ + G ++ + + +
Sbjct: 286 CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIE 331
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 7e-06
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQL--ATGIEVATYS 93
V ITGG IG LA + A EGA +L R G + A + + G EV +
Sbjct: 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAA 318
Query: 94 ADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVR 136
DV + DA+ + P + + G+ ++ S +
Sbjct: 319 CDVAERDALAALVTAY-PPNAVFHTAGILDDAVIDTLSPESFE 360
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 9e-06
Identities = 12/64 (18%), Positives = 26/64 (40%)
Query: 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
+ I G + G + +A G V+ + R+ K+ + + I + +D+ D
Sbjct: 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSD 61
Query: 99 FDAV 102
+ V
Sbjct: 62 QNVV 65
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 31/128 (24%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSIL--ARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ +TG + G+G A+ V + G + + D
Sbjct: 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEE------------IVACD 50
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+ D AV + + D +++ G G + +++ + NI G++++ +AA
Sbjct: 51 LADAQAVHDLVKD---CDG-IIHLG----GVSVERPWNDI---LQANIIGAYNLYEAA-- 97
Query: 156 LIKKRQNG 163
R G
Sbjct: 98 ----RNLG 101
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 6e-05
Identities = 20/123 (16%), Positives = 33/123 (26%), Gaps = 22/123 (17%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGA-----RVSILARSGKKLEEAKQSIQLATGIEVATY 92
I G + IG +LA +V +AR + I
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQC------ 55
Query: 93 SADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
D+ D D + L V + E E + N +++ A
Sbjct: 56 --DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQE---------NCEANSKMFRNVLDA 104
Query: 153 ALP 155
+P
Sbjct: 105 VIP 107
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 8e-05
Identities = 24/135 (17%), Positives = 57/135 (42%), Gaps = 27/135 (20%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ +TG S IG L A++ + +++A + + + + DV +
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGG----------IKFITLDVSNR 51
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKK 159
D + A+++ +D + + G L + + L VN+ G++++++AA
Sbjct: 52 DEIDRAVEKYS-IDA-IFHLA----GILSAKGEKDPALAYKVNMNGTYNILEAA------ 99
Query: 160 RQNGG-----PASIA 169
+Q+ P++I
Sbjct: 100 KQHRVEKVVIPSTIG 114
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 8e-05
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 12/78 (15%)
Query: 40 VFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVA-TYSADVR 97
+T G+S + AKE G R + R +++ K G A
Sbjct: 168 FVMTAGASQLCKL-IIGLAKEEGFRPIVTVRRDEQIALLK-----DIGAAHVLNEKAP-- 219
Query: 98 DF-DAVKTALDEAGPVDV 114
DF ++ + +
Sbjct: 220 DFEATLREVMKAEQ-PRI 236
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 9e-05
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 4/76 (5%)
Query: 40 VFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
V +SG+G A Q A G R + R +++ ++ V T
Sbjct: 171 VIQNASNSGVGQA-VIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL--R 227
Query: 99 FDAVKTALDEAGPVDV 114
+K + +
Sbjct: 228 RPEMKNFFKDMPQPRL 243
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 9e-05
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Query: 39 HVFITGGSSGIGLALAHQ-AAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+V I G I + +Q A K+ + ++ AR K+ + T ++ DV
Sbjct: 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-----YPTNSQIIM--GDVL 77
Query: 98 DFDAVKTALDEAGPVDVLVVNQG 120
+ A+K A+ D++ N
Sbjct: 78 NHAALKQAMQG---QDIVYANLT 97
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQL--A 84
P + P V +TGG+ GIG +A + A++GA +L R G A +
Sbjct: 230 PGSGKRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ 289
Query: 85 TGIEVATYSADVRDFDAVKTALDE 108
G+ V + D D +A+ L E
Sbjct: 290 LGVRVTIAACDAADREALAALLAE 313
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 16/81 (19%)
Query: 39 HVFITGGSSG-IGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
+ I G G +GL LA + +G V+ L RS + + G++ ADV
Sbjct: 5 KILIAG--CGDLGLELARRLTAQGHEVTGLRRSAQPMPA---------GVQT--LIADVT 51
Query: 98 DFDAVKTALDEAGPVDVLVVN 118
D + + + ++LV
Sbjct: 52 RPDTLASIVHLR--PEILVYC 70
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 9/65 (13%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAK--QSIQLATGIEVATYSADVR 97
+FI G + +G +L + ++ AR +++ + +++ + +
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLH 62
Query: 98 DFDAV 102
DA+
Sbjct: 63 GMDAI 67
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEE-AKQSIQLATGIEVATYSADVR 97
+ + G + G A+ +A + G V + R +K + ++ + AD+
Sbjct: 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLD 61
Query: 98 DFDAVKTAL 106
DAV AL
Sbjct: 62 SVDAVVDAL 70
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEE--AKQSIQLATGIEVATYSADVR 97
V + G + + L + +G + R+ ++ E + + + +S
Sbjct: 24 VLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFA 83
Query: 98 DFDAV 102
DAV
Sbjct: 84 SIDAV 88
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 4e-04
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V I G + IG +A + ILAR G + + + + +
Sbjct: 13 VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQ 72
Query: 100 DAVKTALDEAGPVDVLV 116
+A++ L E +D++V
Sbjct: 73 EAMEKILKEHE-IDIVV 88
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 5e-04
Identities = 17/132 (12%), Positives = 38/132 (28%), Gaps = 11/132 (8%)
Query: 39 HVFITGGSSGIGLALAHQA-AKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97
++ I G + I L +++ R K + + V +
Sbjct: 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE----IIDHERVTVIEGSFQ 62
Query: 98 DFDAVKTALDEAGPVDVLVVNQGVFVPGE---LEVQSLDEVRLMIDVNITGSFHMIKAAL 154
+ ++ A+ +V+ V ++ S +R +I V++ G AL
Sbjct: 63 NPGXLEQAVTN---AEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVAL 119
Query: 155 PLIKKRQNGGPA 166
Sbjct: 120 EKWTFDNLPISY 131
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 366 | |||
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.98 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.98 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.97 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.97 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.97 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.97 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.96 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.95 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.95 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.94 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.93 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.93 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.93 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.9 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.9 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.89 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.88 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.88 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.87 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.87 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.86 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.86 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.86 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.86 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.86 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.86 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.85 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.85 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.85 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.85 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.84 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.84 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.84 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.84 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.84 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.84 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.84 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.84 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.83 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.83 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.83 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.82 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.82 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.81 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.81 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.81 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.81 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.81 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.81 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.81 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.8 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.8 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.8 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.8 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.8 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.8 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.79 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.79 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.79 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.79 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.79 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.79 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.79 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.79 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.78 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.78 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.78 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.78 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.78 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.77 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.76 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.76 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.75 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.74 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.74 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.73 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.73 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.72 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.72 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.72 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.71 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.7 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.7 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.68 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.67 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.66 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.63 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.62 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.61 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.59 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.59 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.58 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.58 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.57 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.57 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.54 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.48 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.48 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.48 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.45 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.45 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.44 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.32 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.31 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.03 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.88 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.81 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.71 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.68 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.59 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.57 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.53 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.5 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.47 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.41 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.41 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.33 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.32 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.31 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.3 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.28 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.28 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.25 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.24 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.22 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.12 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.12 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.11 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.09 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 98.07 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.07 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.06 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.99 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.98 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.98 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 97.98 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.96 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.95 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.92 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.86 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.86 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.84 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.84 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.82 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.81 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.81 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.79 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 97.79 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.75 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.74 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.72 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.7 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.69 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.67 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.66 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.6 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.59 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.59 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.58 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.54 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.54 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.5 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.49 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.49 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.47 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.44 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.4 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.35 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.34 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.34 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.32 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.3 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.28 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.28 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.27 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.25 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.19 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.15 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.09 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.08 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.04 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.04 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.01 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.01 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.01 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.99 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.95 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.95 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 96.95 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.94 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 96.93 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.91 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.9 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.88 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.85 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.84 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.83 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.76 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.76 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.76 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.73 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 96.72 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.66 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.66 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.65 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 96.64 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.64 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.62 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.6 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.59 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.58 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.56 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.53 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.51 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.5 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.49 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 96.46 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.39 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.39 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.37 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.36 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.35 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.33 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.33 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.31 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.3 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.27 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.27 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.27 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 96.25 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 96.22 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.22 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.2 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.2 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.19 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.17 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.16 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.15 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.15 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.13 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 96.12 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.1 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.1 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 96.05 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 96.01 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 95.96 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 95.86 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 95.86 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 95.84 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 95.8 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 95.75 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 95.74 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 95.73 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 95.73 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 95.7 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 95.63 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 95.59 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 95.59 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 95.54 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 95.5 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 95.47 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 95.33 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 95.29 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 95.26 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 95.22 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 95.21 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 95.19 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 95.16 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 95.15 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 95.14 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 95.11 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 95.03 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 94.93 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 94.84 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 94.84 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 94.82 | |
| 1u8x_X | 472 | Maltose-6'-phosphate glucosidase; structural genom | 94.82 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 94.78 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 94.75 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 94.72 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 94.71 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 94.71 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 94.68 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 94.65 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 94.65 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 94.61 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 94.59 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 94.57 |
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-56 Score=411.68 Aligned_cols=247 Identities=20% Similarity=0.222 Sum_probs=228.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++... +.++.++++|++|++++++++++
T Consensus 4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK-GYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999998876 67899999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||+....++.+.++++|++++++|+.|+|+++|+++|+|.+++. .|+||++||.++..
T Consensus 83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--~G~IVnisS~~~~~--------- 151 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS--GGKIINIGSLTSQA--------- 151 (255)
T ss_dssp TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCGGGTS---------
T ss_pred HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC--CCEEEEEeehhhcC---------
Confidence 689999999999999999999999999999999999999999999999987543 68999999999987
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+|++.+...
T Consensus 152 -------------~~~~~~-----------------~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~ 201 (255)
T 4g81_D 152 -------------ARPTVA-----------------PYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI 201 (255)
T ss_dssp -------------BCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH
T ss_pred -------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhccc
Confidence 777778 99999999999999999999999999999999999999887643
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
+ .++..+.+.+.+|.||+++|+|++..++||+ ||+++|+|||+|.|||||++.
T Consensus 202 ~-----------------~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~----S~~a~~iTG~~i~VDGG~~Av 254 (255)
T 4g81_D 202 E-----------------DKQFDSWVKSSTPSQRWGRPEELIGTAIFLS----SKASDYINGQIIYVDGGWLAV 254 (255)
T ss_dssp T-----------------CHHHHHHHHHHSTTCSCBCGGGGHHHHHHHH----SGGGTTCCSCEEEESTTGGGB
T ss_pred C-----------------CHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh----CchhCCCcCCEEEECCCeEee
Confidence 2 3566677888999999999999999999999 999999999999999999753
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-56 Score=406.11 Aligned_cols=246 Identities=23% Similarity=0.240 Sum_probs=221.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++|+||++|||||++|||+++|++|+++|++|++++|++++++++.++++.. +.++.++++|++|++++++++++
T Consensus 2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999765 67899999999999999888765
Q ss_pred -cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+.. ..++.+.+.++|++++++|+.|+|+++|+++|+|++++ .|+||++||.++..
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~---~G~IVnisS~~g~~-------- 149 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG---KGVIVNTASIAGIR-------- 149 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTC--------
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEEechhhcC--------
Confidence 699999999999875 47799999999999999999999999999999999987 69999999999987
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+|++....
T Consensus 150 --------------~~~~~~-----------------~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~ 198 (254)
T 4fn4_A 150 --------------GGFAGA-----------------PYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS 198 (254)
T ss_dssp --------------SSSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC
T ss_pred --------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccc
Confidence 777778 9999999999999999999999999999999999999986543
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHh-hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALD-GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.. +.++..+.... ..+.||+++|+|+++.++||+ |++++|+|||+|.||||+|.
T Consensus 199 ~~----------------~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLa----Sd~a~~iTG~~i~VDGG~t~ 253 (254)
T 4fn4_A 199 SK----------------PSELGMRTLTKLMSLSSRLAEPEDIANVIVFLA----SDEASFVNGDAVVVDGGLTV 253 (254)
T ss_dssp SS----------------CCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred cC----------------CcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh----CchhcCCcCCEEEeCCCccc
Confidence 21 12333333333 357799999999999999999 99999999999999999974
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-56 Score=402.26 Aligned_cols=243 Identities=23% Similarity=0.260 Sum_probs=220.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+++|+||++|||||++|||+++|++|+++|++|++++|+.. ++..+++... +.++.++++|++|+++++++++ +++
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~-g~~~~~~~~Dv~d~~~v~~~~~-~g~ 79 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD-GGNASALLIDFADPLAAKDSFT-DAG 79 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT-TCCEEEEECCTTSTTTTTTSST-TTC
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHH-hCC
Confidence 47899999999999999999999999999999999999865 4555566554 6789999999999999988775 478
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||+....++.+.+.++|++++++|+.|+|+++|+++|+|+++++ .|+||++||.++..
T Consensus 80 iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~--~G~IVnisS~~~~~------------- 144 (247)
T 4hp8_A 80 FDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGR--SGKVVNIASLLSFQ------------- 144 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCGGGTS-------------
T ss_pred CCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC--CcEEEEEechhhCC-------------
Confidence 999999999999999999999999999999999999999999999987643 68999999999988
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|++||+|+.+|+|++|.||+++|||||+|+||+|+|++.+....
T Consensus 145 ---------g~~~~~-----------------~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~--- 195 (247)
T 4hp8_A 145 ---------GGIRVP-----------------SYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRA--- 195 (247)
T ss_dssp ---------CCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT---
T ss_pred ---------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhccc---
Confidence 888888 999999999999999999999999999999999999999876432
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.++..+.+.+.+|.||+++|+|+++.++||+ ||+++|+|||+|.|||||++
T Consensus 196 --------------~~~~~~~~~~~~PlgR~g~peeiA~~v~fLa----Sd~a~~iTG~~i~VDGG~~A 246 (247)
T 4hp8_A 196 --------------DAARNKAILERIPAGRWGHSEDIAGAAVFLS----SAAADYVHGAILNVDGGWLA 246 (247)
T ss_dssp --------------SHHHHHHHHTTCTTSSCBCTHHHHHHHHHHT----SGGGTTCCSCEEEESTTGGG
T ss_pred --------------CHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh----CchhcCCcCCeEEECccccc
Confidence 2445567888999999999999999999999 99999999999999999873
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-55 Score=403.91 Aligned_cols=247 Identities=27% Similarity=0.348 Sum_probs=217.1
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.+..+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++++|++|++++++++++
T Consensus 22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----g~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GGGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp ---CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeEEEEecCCCHHHHHHHHHHH
Confidence 4455699999999999999999999999999999999999999988887766 56788999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+|+++|+++|+|++ .|+||++||.++..
T Consensus 98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-----~G~IInisS~~~~~------- 165 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-----GSSVVLTGSTAGST------- 165 (273)
T ss_dssp HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-----EEEEEEECCGGGGS-------
T ss_pred HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-----CCeEEEEeehhhcc-------
Confidence 699999999999998899999999999999999999999999999999975 47999999999987
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+|+++.+
T Consensus 166 ---------------~~~~~~-----------------~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~ 213 (273)
T 4fgs_A 166 ---------------GTPAFS-----------------VYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVE 213 (273)
T ss_dssp ---------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-----
T ss_pred ---------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHH
Confidence 888888 999999999999999999999999999999999999998776
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.....+ ...++..+.+...+|.||+++|+|++..++||+ ||+++|+|||+|.||||+++
T Consensus 214 ~~~~~~------------~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLa----Sd~a~~iTG~~i~VDGG~s~ 272 (273)
T 4fgs_A 214 LAGKDP------------VQQQGLLNALAAQVPMGRVGRAEEVAAAALFLA----SDDSSFVTGAELFVDGGSAQ 272 (273)
T ss_dssp ----CH------------HHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTTT
T ss_pred hhccCc------------hhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCccCCeEeECcChhh
Confidence 432211 124566778888999999999999999999999 99999999999999999874
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-54 Score=393.18 Aligned_cols=233 Identities=24% Similarity=0.271 Sum_probs=209.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++||++|||||++|||+++|++|+++|++|++++|+.+.+++ ..+.++..+++|++|++++++++++++++|+
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi 81 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------PRHPRIRREELDITDSQRLQRLFEALPRLDV 81 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 589999999999999999999999999999999999876543 2255789999999999999999999999999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
+|||||+.. ++.+.+.++|++++++|+.|+|+++|+++|+|+++ .|+||++||.++..
T Consensus 82 LVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~----~G~IVnisS~~~~~---------------- 139 (242)
T 4b79_A 82 LVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR----GGSILNIASMYSTF---------------- 139 (242)
T ss_dssp EEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----CEEEEEECCGGGTS----------------
T ss_pred EEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc----CCeEEEEeeccccC----------------
Confidence 999999853 56788999999999999999999999999999864 48999999999988
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcch
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~ 274 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+||+.+...
T Consensus 140 ------~~~~~~-----------------~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~------- 189 (242)
T 4b79_A 140 ------GSADRP-----------------AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK------- 189 (242)
T ss_dssp ------CCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C-------
T ss_pred ------CCCCCH-----------------HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc-------
Confidence 788888 99999999999999999999999999999999999999876532
Q ss_pred hhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 275 SIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 275 ~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..++..+.+.+.+|.||+++|+|+++.++||+ ||+++|+|||+|.|||||++
T Consensus 190 ----------~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLa----Sd~a~~iTG~~l~VDGG~la 241 (242)
T 4b79_A 190 ----------ADVEATRRIMQRTPLARWGEAPEVASAAAFLC----GPGASFVTGAVLAVDGGYLC 241 (242)
T ss_dssp ----------CCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTGGG
T ss_pred ----------CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCccCceEEECccHhh
Confidence 22455677888999999999999999999999 99999999999999999864
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-53 Score=393.13 Aligned_cols=248 Identities=20% Similarity=0.229 Sum_probs=214.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
|+++|+||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++.+. +.++.++++|++|++++++++++
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR-QPRATYLPVELQDDAQCRDAVAQTI 78 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc-CCCEEEEEeecCCHHHHHHHHHHHH
Confidence 568999999999999999999999999999999999999988754 34445444 66889999999999998887765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+..... .+.+.++|++.+++|+.++++++|+++|+|+++ .|+||++||.++..
T Consensus 79 ~~~G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~----~G~IVnisS~~~~~-------- 145 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT----RGAIVNISSKTAVT-------- 145 (258)
T ss_dssp HHHSCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCTHHHH--------
T ss_pred HHhCCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCeEEEEeehhhcc--------
Confidence 799999999999865444 578999999999999999999999999999765 48999999999988
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+|++.+..
T Consensus 146 --------------~~~~~~-----------------~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~ 194 (258)
T 4gkb_A 146 --------------GQGNTS-----------------GYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNW 194 (258)
T ss_dssp --------------CCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC---
T ss_pred --------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhh
Confidence 888888 9999999999999999999999999999999999999998764
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCC-CeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG-SFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g-r~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
.... ..+++..+.+...+|.| |+++|+|+++.++||+ ||+++|+|||+|.||||||++
T Consensus 195 ~~~~-------------~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLa----S~~a~~iTG~~i~VDGG~T~l 253 (258)
T 4gkb_A 195 IATF-------------EDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLL----SPRASHTTGEWLFVDGGYTHL 253 (258)
T ss_dssp ---------------------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTTTS
T ss_pred hhcc-------------cChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh----CchhcCccCCeEEECCCcchh
Confidence 3321 13455667788889996 8999999999999999 999999999999999999864
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=380.07 Aligned_cols=244 Identities=16% Similarity=0.137 Sum_probs=221.8
Q ss_pred CcCCCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 32 RIPIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.++|+||++|||||+| |||+++|++|+++|++|++++|+++.++++.+++++..+.++.++++|++|++++++++++
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4789999999999875 9999999999999999999999999999998888877677899999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
++++|++|||||+... ..+.+.+.++|+..+++|+.+++.+++.+.+++++ .|+||++||.++..
T Consensus 81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-----~G~IVnisS~~~~~--- 152 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-----GGSIVATTYLGGEF--- 152 (256)
T ss_dssp HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT-----CEEEEEEECGGGTS---
T ss_pred HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCEEEEEecccccc---
Confidence 6999999999998643 45678899999999999999999999999887765 58999999999987
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.++.. .|++||+|+.+|+|+||.|++++|||||+|+||+|+|+
T Consensus 153 -------------------~~~~~~-----------------~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 196 (256)
T 4fs3_A 153 -------------------AVQNYN-----------------VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTL 196 (256)
T ss_dssp -------------------CCTTTH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred -------------------Ccccch-----------------hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCCh
Confidence 788888 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+.+.. ...++..+.+.+.+|.||+++|+|+++.++||+ ||+++|+|||+|+|||||+.
T Consensus 197 ~~~~~-----------------~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~----Sd~a~~iTG~~i~VDGG~~a 254 (256)
T 4fs3_A 197 SAKGV-----------------GGFNTILKEIKERAPLKRNVDQVEVGKTAAYLL----SDLSSGVTGENIHVDSGFHA 254 (256)
T ss_dssp GGTTC-----------------TTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred hhhhc-----------------cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCccCCEEEECcCHHh
Confidence 86542 234677788889999999999999999999999 99999999999999999874
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-52 Score=382.83 Aligned_cols=240 Identities=20% Similarity=0.281 Sum_probs=211.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
+|++|||||++|||+++|++|+++|++|++++|+++++++..++ +.++.++++|++|++++++++++ ++++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-----RPNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-----CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----cCCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 59999999999999999999999999999999998776655443 45788999999999999888765 6999
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||+....++.+.+.++|++++++|+.|+|+++|+++|+|+++ .|+||++||.++..
T Consensus 77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~----~G~IInisS~~~~~-------------- 138 (247)
T 3ged_A 77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN----KGRIINIASTRAFQ-------------- 138 (247)
T ss_dssp CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----TCEEEEECCGGGTS--------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc----CCcEEEEeeccccc--------------
Confidence 999999999999999999999999999999999999999999999875 48999999999987
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.++.. .|++||+|+.+|+|++|.|+++ |||||+|+||+|+|++.++.
T Consensus 139 --------~~~~~~-----------------~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~------ 186 (247)
T 3ged_A 139 --------SEPDSE-----------------AYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEF------ 186 (247)
T ss_dssp --------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---C------
T ss_pred --------CCCCCH-----------------HHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHH------
Confidence 778888 9999999999999999999998 99999999999999975432
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQWNWYG 352 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~~~~~~~~~~~ 352 (366)
.+.....+|.||+++|+|++..++||+ |+ +|+|||+|.||||+++-..+.-.|+|+.
T Consensus 187 -----------------~~~~~~~~Pl~R~g~pediA~~v~fL~----s~--~~iTG~~i~VDGG~s~r~~~~~~~~~~~ 243 (247)
T 3ged_A 187 -----------------TQEDCAAIPAGKVGTPKDISNMVLFLC----QQ--DFITGETIIVDGGMSKRMIYHGDWNWFY 243 (247)
T ss_dssp -----------------CHHHHHTSTTSSCBCHHHHHHHHHHHH----HC--SSCCSCEEEESTTGGGCCCCTTSTTCCC
T ss_pred -----------------HHHHHhcCCCCCCcCHHHHHHHHHHHH----hC--CCCCCCeEEECcCHHHhCcccCCCCCcC
Confidence 123456789999999999999999999 63 6999999999999997666666677765
Q ss_pred HH
Q 017757 353 SI 354 (366)
Q Consensus 353 ~~ 354 (366)
.|
T Consensus 244 ~~ 245 (247)
T 3ged_A 244 KI 245 (247)
T ss_dssp CC
T ss_pred CC
Confidence 44
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-51 Score=374.84 Aligned_cols=245 Identities=19% Similarity=0.207 Sum_probs=207.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++|+||++|||||++|||+++|++|+++|++|++++|+..+. ..+..++++|++|++++++++++
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------LPEELFVEADLTTKEGCAIVAEATRQR 75 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999986521 12334789999999998887765
Q ss_pred cCCCcEEEEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 AGPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+... .++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..
T Consensus 76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~---~G~Iv~isS~~~~~-------- 144 (261)
T 4h15_A 76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG---SGVVVHVTSIQRVL-------- 144 (261)
T ss_dssp TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS--------
T ss_pred cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC---CceEEEEEehhhcc--------
Confidence 7999999999997643 5789999999999999999999999999999999887 68999999999876
Q ss_pred cCccccccccccCCCCC-CccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 187 KGINENKLCESSGKGHG-GYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.+ +.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++...
T Consensus 145 --------------~~~~~~~-----------------~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~ 193 (261)
T 4h15_A 145 --------------PLPESTT-----------------AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVR 193 (261)
T ss_dssp --------------CCTTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred --------------CCCCccH-----------------HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhh
Confidence 554 456 899999999999999999999999999999999999998776
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
........ ........++..+.....+|.||+++|+|+++.++||+ ||+++|+|||+|+||||+.
T Consensus 194 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLa----S~~a~~itG~~i~VDGG~v 258 (261)
T 4h15_A 194 LAERLAKQ-----AGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLA----SDRAASITGAEYTIDGGTV 258 (261)
T ss_dssp HHHHHHHH-----TTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTCS
T ss_pred hhHHHHHh-----hccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh----CchhcCccCcEEEECCcCc
Confidence 43221000 00000122444556667789999999999999999999 9999999999999999973
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=354.93 Aligned_cols=254 Identities=21% Similarity=0.237 Sum_probs=223.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
+++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+ .++.++++|++|++++++++++
T Consensus 3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999888877444 4599999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~-------- 151 (265)
T 3lf2_A 83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA---DAAIVCVNSLLASQ-------- 151 (265)
T ss_dssp HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST---TEEEEEEEEGGGTS--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC---CeEEEEECCcccCC--------
Confidence 58999999999998888899999999999999999999999999999998865 68999999999887
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus 152 --------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 200 (265)
T 3lf2_A 152 --------------PEPHMV-----------------ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRR 200 (265)
T ss_dssp --------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred --------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhh
Confidence 777777 9999999999999999999999999999999999999987765
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhh--hhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDG--IKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
....... ..++++..+.+... +|.+|++.|+|++..++||+ |+.++|+||+++.+|||+++
T Consensus 201 ~~~~~~~---------~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~----s~~~~~itG~~i~vdGG~~~ 263 (265)
T 3lf2_A 201 FEAREER---------ELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLA----SPLSAYTTGSHIDVSGGLSR 263 (265)
T ss_dssp HTC---------------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSEEEEESSSCCC
T ss_pred hhhhhhh---------ccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHh----CchhcCcCCCEEEECCCCcC
Confidence 4321110 12345555444443 89999999999999999999 99999999999999999753
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-47 Score=351.64 Aligned_cols=244 Identities=24% Similarity=0.354 Sum_probs=222.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
+.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++++|++|++++++++++
T Consensus 4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999998888776557899999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc-cccccccC
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ-CWTIKNTN 185 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~-~~~~~~~~ 185 (366)
++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+. .
T Consensus 84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---~g~iv~isS~~~~~~------- 153 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG---SGRVVLTSSITGPIT------- 153 (262)
T ss_dssp HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS---SCEEEEECCSBTTTB-------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEechhhccC-------
Confidence 58999999999998888899999999999999999999999999999999876 6899999999875 4
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus 154 ---------------~~~~~~-----------------~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 201 (262)
T 3pk0_A 154 ---------------GYPGWS-----------------HYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE 201 (262)
T ss_dssp ---------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT
T ss_pred ---------------CCCCCh-----------------hhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc
Confidence 566666 999999999999999999999999999999999999997653
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. .++..+.+...++.+|++.|+|++..+.||+ |++++|+|||++.+|||++
T Consensus 202 ~-------------------~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~----s~~~~~itG~~i~vdGG~~ 252 (262)
T 3pk0_A 202 N-------------------GEEYIASMARSIPAGALGTPEDIGHLAAFLA----TKEAGYITGQAIAVDGGQV 252 (262)
T ss_dssp T-------------------CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred c-------------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCcCCEEEECCCee
Confidence 1 2455667788899999999999999999999 9999999999999999976
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=351.18 Aligned_cols=248 Identities=22% Similarity=0.235 Sum_probs=224.6
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++++|++|++++++++++
T Consensus 14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 345799999999999999999999999999999999999999999998888775678899999999999998888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+..+.++.+.+.++|++++++|+.++++++++++|+|++++. .++||++||.++..
T Consensus 94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~g~iv~isS~~~~~-------- 163 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE--GGAIITVASAAALA-------- 163 (266)
T ss_dssp HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--CEEEEEECCGGGTS--------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CeEEEEEcchhhcc--------
Confidence 589999999999988888999999999999999999999999999999988652 57999999999887
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus 164 --------------~~~~~~-----------------~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 212 (266)
T 4egf_A 164 --------------PLPDHY-----------------AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV 212 (266)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH
T ss_pred --------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh
Confidence 777777 9999999999999999999999999999999999999987653
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. ..++..+.+...++.+|++.|+|++..++||+ |+.++|+|||++.+|||++.
T Consensus 213 ~-----------------~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~----s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 213 W-----------------GDEAKSAPMIARIPLGRFAVPHEVSDAVVWLA----SDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp T-----------------CSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred c-----------------cChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCccCcEEEECCCccC
Confidence 2 12444566778899999999999999999999 99999999999999999863
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=348.90 Aligned_cols=257 Identities=21% Similarity=0.295 Sum_probs=226.8
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.+.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... +..+.++.+|+++++++++++++
T Consensus 3 ~m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 3 AMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp CCCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred ccccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh
Confidence 35678999999999999999999999999999999999999999999988887764 45788999999999999999999
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+..+.++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 149 (267)
T 3t4x_A 83 YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK---EGRVIFIASEAAIM---------- 149 (267)
T ss_dssp CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---EEEEEEECCGGGTS----------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCEEEEEcchhhcc----------
Confidence 99999999999998888899999999999999999999999999999998876 68999999999887
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||.++|++.+....
T Consensus 150 ------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~ 200 (267)
T 3t4x_A 150 ------------PSQEMA-----------------HYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLN 200 (267)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHH
T ss_pred ------------CCCcch-----------------HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHh
Confidence 777777 999999999999999999999999999999999999998776433
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhh----hhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDG----IKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~----i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.... ....++++..+..... .+.+|++.|+|++..++||+ |+.++|+|||++.+|||++.
T Consensus 201 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~----s~~~~~itG~~i~vdGG~~~ 264 (267)
T 3t4x_A 201 SLYP--------NEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLS----SPLSSAINGSALRIDGGLVR 264 (267)
T ss_dssp HSST--------TSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHH----SGGGTTCCSCEEEESTTCSC
T ss_pred hcCc--------ccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHc----CccccCccCCeEEECCCccc
Confidence 2110 1123455555544433 35799999999999999999 99999999999999999764
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=346.07 Aligned_cols=244 Identities=23% Similarity=0.257 Sum_probs=221.2
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.++++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++
T Consensus 5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-GGKAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp -CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999999999888888754 67899999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||.....++ +.+.++|++++++|+.|+++++++++|+|++++ .++||++||.++..
T Consensus 84 ~~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~------- 152 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG---GGAILNISSMAGEN------- 152 (256)
T ss_dssp HHHHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCGGGTC-------
T ss_pred HHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEEcCHHHcC-------
Confidence 5899999999999887777 889999999999999999999999999999876 68999999999887
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus 153 ---------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 200 (256)
T 3gaf_A 153 ---------------TNVRMA-----------------SYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT 200 (256)
T ss_dssp ---------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred ---------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh
Confidence 777777 999999999999999999999999999999999999998765
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. .++..+.+....+.+|++.|+|++..++||+ +++++|+|||++.+|||++
T Consensus 201 ~~------------------~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~----s~~~~~itG~~i~vdgG~~ 252 (256)
T 3gaf_A 201 VL------------------TPEIERAMLKHTPLGRLGEAQDIANAALFLC----SPAAAWISGQVLTVSGGGV 252 (256)
T ss_dssp HC------------------CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSC
T ss_pred cc------------------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CCcccCccCCEEEECCCcc
Confidence 31 2445567778889999999999999999999 9999999999999999975
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=349.47 Aligned_cols=245 Identities=19% Similarity=0.205 Sum_probs=222.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++++|++|++++++++++
T Consensus 21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-GHDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999988888654 66899999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iV~isS~~~~~--------- 167 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG---YGKIVNIGSLTSEL--------- 167 (271)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS---------
T ss_pred HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEEccHHhCC---------
Confidence 58999999999998888899999999999999999999999999999999876 68999999998877
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus 168 -------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 217 (271)
T 4ibo_A 168 -------------ARATVA-----------------PYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI 217 (271)
T ss_dssp -------------BCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred -------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc
Confidence 666777 99999999999999999999999999999999999999876542
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. .++..+.+....+.+|++.|+|++..++||+ ++.++|+|||++.+|||++.
T Consensus 218 ~-----------------~~~~~~~~~~~~p~~r~~~pedva~~v~~L~----s~~~~~itG~~i~vdGG~~~ 269 (271)
T 4ibo_A 218 D-----------------NPEFDAWVKARTPAKRWGKPQELVGTAVFLS----ASASDYVNGQIIYVDGGMLS 269 (271)
T ss_dssp H-----------------CHHHHHHHHHHSTTCSCBCGGGGHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred c-----------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCCCcEEEECCCeec
Confidence 2 1345566777889999999999999999999 99999999999999999763
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=348.12 Aligned_cols=248 Identities=21% Similarity=0.218 Sum_probs=223.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
...++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++++|++|++++++++++
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999999999999999999999888888776678999999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~--------- 169 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH---GGVIVNITATLGNR--------- 169 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH---CEEEEEECCSHHHH---------
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CCEEEEECchhhCC---------
Confidence 58999999999988888889999999999999999999999999999998776 68999999999887
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.....
T Consensus 170 -------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 219 (277)
T 4fc7_A 170 -------------GQALQV-----------------HAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRL 219 (277)
T ss_dssp -------------TCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHH
T ss_pred -------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhc
Confidence 777777 99999999999999999999999999999999999998654321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
. .+++..+......+.+|++.|+|++..++||+ |+.++|+||+++.+|||+...
T Consensus 220 ~----------------~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~----s~~~~~itG~~i~vdGG~~~~ 273 (277)
T 4fc7_A 220 G----------------GPQASLSTKVTASPLQRLGNKTEIAHSVLYLA----SPLASYVTGAVLVADGGAWLT 273 (277)
T ss_dssp S----------------CCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTHHHH
T ss_pred c----------------CCHHHHHHHhccCCCCCCcCHHHHHHHHHHHc----CCccCCcCCCEEEECCCcccC
Confidence 1 12445566777889999999999999999999 999999999999999998754
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=344.82 Aligned_cols=239 Identities=24% Similarity=0.309 Sum_probs=216.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. +..++++|++|++++++++++
T Consensus 4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----NGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cceEEEEeCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999888887776643 577899999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~---~g~iv~isS~~~~~--------- 147 (248)
T 3op4_A 80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR---QGRIINVGSVVGTM--------- 147 (248)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHH---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CCEEEEEcchhhcC---------
Confidence 58999999999998888899999999999999999999999999999998876 68999999999887
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++|+++++.|++++|||||+|+||+++|++.+..
T Consensus 148 -------------~~~~~~-----------------~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~- 196 (248)
T 3op4_A 148 -------------GNAGQA-----------------NYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL- 196 (248)
T ss_dssp -------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS-
T ss_pred -------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc-
Confidence 777777 9999999999999999999999999999999999999986542
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++..+......+.+|++.|+|++..+.||+ +++++|+||+++.+|||++
T Consensus 197 -----------------~-~~~~~~~~~~~p~~r~~~p~dva~~v~~L~----s~~~~~itG~~i~vdgG~~ 246 (248)
T 3op4_A 197 -----------------N-DEQRTATLAQVPAGRLGDPREIASAVAFLA----SPEAAYITGETLHVNGGMY 246 (248)
T ss_dssp -----------------C-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSS
T ss_pred -----------------C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CCccCCccCcEEEECCCee
Confidence 1 334455677889999999999999999999 9999999999999999975
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-46 Score=347.13 Aligned_cols=260 Identities=26% Similarity=0.373 Sum_probs=215.9
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC----------------chhHHHHHHHHHhhcCCeEEE
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS----------------GKKLEEAKQSIQLATGIEVAT 91 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~----------------~~~~~~~~~~l~~~~~~~v~~ 91 (366)
|.+++.+++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++... +.++.+
T Consensus 2 p~~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 80 (286)
T 3uve_A 2 PGSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-NRRIVT 80 (286)
T ss_dssp ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-TCCEEE
T ss_pred CCCCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-CCceEE
Confidence 4456678999999999999999999999999999999999987 56666666666543 668999
Q ss_pred EEecCCCHHHHHHHHHh----cCCCcEEEEcCCCCCCCC-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 017757 92 YSADVRDFDAVKTALDE----AGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPA 166 (366)
Q Consensus 92 ~~~Dls~~~~v~~~~~~----~~~id~vi~nAG~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g 166 (366)
+++|++|++++++++++ ++++|++|||||+..... +.+.+.++|++++++|+.|+++++++++|+|++++. .+
T Consensus 81 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--~g 158 (286)
T 3uve_A 81 AEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR--GG 158 (286)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--CE
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--Cc
Confidence 99999999999888765 589999999999877654 888999999999999999999999999999988642 58
Q ss_pred EEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccC
Q 017757 167 SIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD 246 (366)
Q Consensus 167 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~ 246 (366)
+||++||..+.. +.++.. .|++||+|+++|+++++.|++++
T Consensus 159 ~iv~isS~~~~~----------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~ 199 (286)
T 3uve_A 159 SIILTSSVGGLK----------------------AYPHTG-----------------HYVAAKHGVVGLMRAFGVELGQH 199 (286)
T ss_dssp EEEEECCGGGTS----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEEEECchhhcc----------------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999887 777777 99999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHH--HHhhhhCCCeEeeCCchhHHHHHHhcCCCCch
Q 017757 247 DIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKK--ALDGIKSGSFIVPCNSEGFLLSIATAGLSPQR 324 (366)
Q Consensus 247 gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~ 324 (366)
||+||+|+||+|+|++.+...... ..........+++..+. ....++ +|++.|+|++..++||+ |+++
T Consensus 200 gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~----s~~a 269 (286)
T 3uve_A 200 MIRVNSVHPTHVKTPMLHNEGTFK-----MFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFA----SDEA 269 (286)
T ss_dssp TEEEEEEEESSBSSTTTSSHHHHH-----HHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHH----SGGG
T ss_pred CeEEEEEecCcccCCcccccchhh-----hccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHc----Cccc
Confidence 999999999999999876422110 00000011234444432 344566 89999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHH
Q 017757 325 SVLMAFVEVVAAGLI 339 (366)
Q Consensus 325 ~~itG~~i~~dgG~~ 339 (366)
+|+|||+|.+|||++
T Consensus 270 ~~itG~~i~vdGG~~ 284 (286)
T 3uve_A 270 RYITGVTLPIDAGSC 284 (286)
T ss_dssp TTCCSCEEEESTTGG
T ss_pred cCCcCCEEeECCccc
Confidence 999999999999975
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-46 Score=350.30 Aligned_cols=246 Identities=25% Similarity=0.361 Sum_probs=222.5
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
+...++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++......++.++++|++|++++++++++
T Consensus 33 ~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 33 RKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART 112 (293)
T ss_dssp -CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999998888766446899999999999998888765
Q ss_pred ----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc-cccccc
Q 017757 109 ----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ-CWTIKN 183 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~-~~~~~~ 183 (366)
++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++ .++||++||..+. .
T Consensus 113 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~iV~isS~~~~~~----- 184 (293)
T 3rih_A 113 VVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG---RGRVILTSSITGPVT----- 184 (293)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS---SCEEEEECCSBTTTB-----
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEEeChhhccC-----
Confidence 58999999999998888899999999999999999999999999999999876 6899999999875 4
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.
T Consensus 185 -----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 230 (293)
T 3rih_A 185 -----------------GYPGWS-----------------HYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGL 230 (293)
T ss_dssp -----------------BCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred -----------------CCCCCH-----------------HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcch
Confidence 555666 9999999999999999999999999999999999999976
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... .++..+.+...++.+|++.|+|++..+.||+ |++++|+||+++.+|||++
T Consensus 231 ~~~-------------------~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~----s~~a~~itG~~i~vdGG~~ 283 (293)
T 3rih_A 231 VDM-------------------GEEYISGMARSIPMGMLGSPVDIGHLAAFLA----TDEAGYITGQAIVVDGGQV 283 (293)
T ss_dssp HHT-------------------CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred hhc-------------------cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CccccCCCCCEEEECCCcc
Confidence 542 1445567778899999999999999999999 9999999999999999975
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-46 Score=345.04 Aligned_cols=254 Identities=19% Similarity=0.251 Sum_probs=224.4
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.+...++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++
T Consensus 4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 4 SMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp ---CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CcCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3455689999999999999999999999999999999999999999988888765 67899999999999999888765
Q ss_pred ---cCCCcEEEEcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ---AGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ---~~~id~vi~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|++|||||.. ...++.+.+.++|++++++|+.++++++++++|+|+++ .++||++||..+..
T Consensus 83 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----~g~iv~isS~~~~~------ 152 (264)
T 3ucx_A 83 MKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES----KGAVVNVNSMVVRH------ 152 (264)
T ss_dssp HHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH----TCEEEEECCGGGGC------
T ss_pred HHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCEEEEECcchhcc------
Confidence 58999999999985 55788899999999999999999999999999999876 37999999999887
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+
T Consensus 153 ----------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 199 (264)
T 3ucx_A 153 ----------------SQAKYG-----------------AYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLK 199 (264)
T ss_dssp ----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHH
T ss_pred ----------------CCCccH-----------------HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHH
Confidence 777777 99999999999999999999999999999999999999877
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
........ .....+++..+.+....+.+|++.|+|++..++||+ |+.++|+|||++.+|||+.
T Consensus 200 ~~~~~~~~--------~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~----s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 200 SYFEHQAG--------KYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMA----SDLASGITGQALDVNCGEY 262 (264)
T ss_dssp HHHHHHHH--------HTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSS
T ss_pred HHHHhhhh--------hcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHc----CccccCCCCCEEEECCCcc
Confidence 64322100 012356778888889999999999999999999999 9999999999999999964
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=346.29 Aligned_cols=242 Identities=22% Similarity=0.286 Sum_probs=207.6
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
...++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|++++++++++
T Consensus 20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (266)
T 3grp_A 20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GKDVFVFSANLSDRKSIKQLAEVA 95 (266)
T ss_dssp -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEeecCCHHHHHHHHHHH
Confidence 4457899999999999999999999999999999999999998877766544 56899999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++ .++||++||..+..
T Consensus 96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~Iv~isS~~~~~------- 165 (266)
T 3grp_A 96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR---YGRIINITSIVGVV------- 165 (266)
T ss_dssp HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCC-----------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CcEEEEECCHHHcC-------
Confidence 58999999999998888888999999999999999999999999999998876 68999999999887
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+.+|+++++.|++++||+||+|+||+|+|++.+.
T Consensus 166 ---------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 213 (266)
T 3grp_A 166 ---------------GNPGQT-----------------NYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK 213 (266)
T ss_dssp ------------------CHH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT
T ss_pred ---------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc
Confidence 666677 999999999999999999999999999999999999997654
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. .++..+.+...++.+|++.|+|++..++||+ |+.++|+|||++.+|||+++
T Consensus 214 ~-------------------~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~----s~~~~~itG~~i~vdGG~~~ 265 (266)
T 3grp_A 214 L-------------------NEKQKEAIMAMIPMKRMGIGEEIAFATVYLA----SDEAAYLTGQTLHINGGMAM 265 (266)
T ss_dssp C-------------------CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTC--
T ss_pred c-------------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCccCCEEEECCCeee
Confidence 2 1344566778899999999999999999999 99999999999999999874
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=342.23 Aligned_cols=245 Identities=25% Similarity=0.311 Sum_probs=218.5
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
...++++||++|||||++|||+++|++|+++|++|++++|+ +.+++..+++... +.++.++++|++|.++++++.+.
T Consensus 24 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~ 101 (273)
T 3uf0_A 24 TGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-GGSAEAVVADLADLEGAANVAEEL 101 (273)
T ss_dssp -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT-TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999976 4566666666543 67899999999999999887543
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++ .++||++||..+..
T Consensus 102 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~IV~isS~~~~~-------- 170 (273)
T 3uf0_A 102 AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG---SGRIVTIASMLSFQ-------- 170 (273)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS--------
T ss_pred HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCEEEEEcchHhcC--------
Confidence 58999999999998888999999999999999999999999999999999876 68999999999887
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus 171 --------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 219 (273)
T 3uf0_A 171 --------------GGRNVA-----------------AYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL 219 (273)
T ss_dssp --------------CCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred --------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc
Confidence 777777 9999999999999999999999999999999999999987654
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. .++..+.+...++.+|++.|+|++..++||+ ++.++++|||++.+|||++
T Consensus 220 ~~-----------------~~~~~~~~~~~~p~~r~~~pedva~~v~~L~----s~~a~~itG~~i~vdGG~~ 271 (273)
T 3uf0_A 220 RA-----------------DDERAAEITARIPAGRWATPEDMVGPAVFLA----SDAASYVHGQVLAVDGGWL 271 (273)
T ss_dssp HT-----------------SHHHHHHHHHHSTTSSCBCGGGGHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred cc-----------------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CchhcCCcCCEEEECcCcc
Confidence 21 2455567778899999999999999999999 9999999999999999975
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-46 Score=345.92 Aligned_cols=257 Identities=26% Similarity=0.302 Sum_probs=221.7
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
++....-+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++++|++|+++++++++
T Consensus 15 ~~~~~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~ 93 (279)
T 3sju_A 15 VPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-GHDVDGSSCDVTSTDEVHAAVA 93 (279)
T ss_dssp ----------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCcccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHH
Confidence 334444568999999999999999999999999999999999999999988888755 6789999999999999988876
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhccCCCCcEEEEecCCccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP--LIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~--~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
+ ++++|+||||||.....++.+.+.++|++++++|+.|+++++++++| .|++++ .++||++||.++..
T Consensus 94 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~---~g~iV~isS~~~~~--- 167 (279)
T 3sju_A 94 AAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG---WGRIVNIASTGGKQ--- 167 (279)
T ss_dssp HHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT---CEEEEEECCGGGTS---
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC---CcEEEEECChhhcc---
Confidence 5 58999999999998888899999999999999999999999999999 577765 68999999999887
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus 168 -------------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 211 (279)
T 3sju_A 168 -------------------GVMYAA-----------------PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETP 211 (279)
T ss_dssp -------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSH
T ss_pred -------------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccch
Confidence 777777 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+.+......... ....+++..+.+...++.+|++.|+|++..++||+ ++.++|+|||++.+|||++
T Consensus 212 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~~a~~itG~~i~vdGG~~ 277 (279)
T 3sju_A 212 MAERVREGYARH--------WGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLV----TDAAASITAQALNVCGGLG 277 (279)
T ss_dssp HHHHHHHSCCSS--------SCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHT----SSGGGGCCSCEEEESTTCC
T ss_pred HHHHHHhhhhhc--------ccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CccccCcCCcEEEECCCcc
Confidence 877654321110 12256777888889999999999999999999999 9999999999999999975
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-46 Score=341.32 Aligned_cols=240 Identities=21% Similarity=0.221 Sum_probs=218.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
+||++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++... +.++.++++|++|++++++++++ ++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-GVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999999986 89988888888888654 66899999999999999988766 58
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||.....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~---~g~iv~isS~~~~~------------ 146 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG---GGHIVSISSLGSIR------------ 146 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT---CEEEEEEEEGGGTS------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEECchhhCC------------
Confidence 999999999998888899999999999999999999999999999999876 68999999998876
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus 147 ----------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--- 196 (258)
T 3oid_A 147 ----------YLENYT-----------------TVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP--- 196 (258)
T ss_dssp ----------BCTTCH-----------------HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT---
T ss_pred ----------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc---
Confidence 666777 99999999999999999999999999999999999999876431
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..++..+.+...++.+|++.|+|++..++||+ |+.++|+||+++.+|||++
T Consensus 197 --------------~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~----s~~~~~itG~~i~vdGG~~ 247 (258)
T 3oid_A 197 --------------NREDLLEDARQNTPAGRMVEIKDMVDTVEFLV----SSKADMIRGQTIIVDGGRS 247 (258)
T ss_dssp --------------THHHHHHHHHHHCTTSSCBCHHHHHHHHHHHT----SSTTTTCCSCEEEESTTGG
T ss_pred --------------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CcccCCccCCEEEECCCcc
Confidence 23556677778899999999999999999999 9999999999999999976
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=346.39 Aligned_cols=254 Identities=24% Similarity=0.331 Sum_probs=210.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.+++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++....+.++.++++|++|++++++++++
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999 667778888887766577899999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.++..
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~-------- 168 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG---WGRIINIASAHGLV-------- 168 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS--------
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEECCccccc--------
Confidence 58999999999998888899999999999999999999999999999999876 68999999999887
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+..
T Consensus 169 --------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~ 217 (281)
T 3v2h_A 169 --------------ASPFKS-----------------AYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ 217 (281)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------
T ss_pred --------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh
Confidence 777777 9999999999999999999999999999999999999987653
Q ss_pred hhcCCcchhhhhccCCCCCHHHH-HHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEV-AKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
....... ...++++. .+.+....+.+|++.|+|++..++||+ |+.++++||+++.+|||++
T Consensus 218 ~~~~~~~--------~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~----s~~a~~itG~~i~vdGG~~ 279 (281)
T 3v2h_A 218 IPDQART--------RGITEEQVINEVMLKGQPTKKFITVEQVASLALYLA----GDDAAQITGTHVSMDGGWT 279 (281)
T ss_dssp ------------------------------CCTTCSCBCHHHHHHHHHHHH----SSGGGGCCSCEEEESTTGG
T ss_pred cchhhhh--------cCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHc----CCCcCCCCCcEEEECCCcc
Confidence 3211100 01222333 334667789999999999999999999 9999999999999999976
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=344.31 Aligned_cols=250 Identities=21% Similarity=0.211 Sum_probs=220.3
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC--CeEEEEEecCCCHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~Dls~~~~v~~~ 105 (366)
|..+.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..... .++.++++|++|+++++++
T Consensus 2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~ 81 (281)
T 3svt_A 2 PGSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA 81 (281)
T ss_dssp ------CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred CCCCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence 45677889999999999999999999999999999999999999999998888876532 3889999999999999888
Q ss_pred HHh----cCCCcEEEEcCCC-CCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 106 LDE----AGPVDVLVVNQGV-FVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 106 ~~~----~~~id~vi~nAG~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
+++ ++++|++|||||. ....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..
T Consensus 82 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~-- 156 (281)
T 3svt_A 82 VDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG---GGSFVGISSIAASN-- 156 (281)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CEEEEEECCHHHHS--
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEeCHHHcC--
Confidence 765 5899999999998 4557888999999999999999999999999999999866 68999999999877
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|
T Consensus 157 --------------------~~~~~~-----------------~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t 199 (281)
T 3svt_A 157 --------------------THRWFG-----------------AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRT 199 (281)
T ss_dssp --------------------CCTTCT-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred --------------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcC
Confidence 667777 9999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++.+.... .++..+.+....+.+|++.|+|++..++||+ ++.++++||+++.+|||++.
T Consensus 200 ~~~~~~~~-----------------~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~----s~~~~~itG~~~~vdgG~~~ 258 (281)
T 3svt_A 200 DLVAAITE-----------------SAELSSDYAMCTPLPRQGEVEDVANMAMFLL----SDAASFVTGQVINVDGGQML 258 (281)
T ss_dssp GGGHHHHT-----------------CHHHHHHHHHHCSSSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred cchhhccc-----------------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CcccCCCCCCEEEeCCChhc
Confidence 98775421 2344566777889999999999999999999 99999999999999999874
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=345.26 Aligned_cols=246 Identities=26% Similarity=0.304 Sum_probs=220.4
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
|..++.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++... +.++.++.+|++|+++++++++
T Consensus 19 p~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~ 97 (270)
T 3ftp_A 19 PGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-GLEGRGAVLNVNDATAVDALVE 97 (270)
T ss_dssp ----CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHH
T ss_pred CcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEEeCCCHHHHHHHHH
Confidence 344566789999999999999999999999999999999999999998888888765 6678899999999999988876
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
+ ++++|+||||||+.....+.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..
T Consensus 98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~----- 169 (270)
T 3ftp_A 98 STLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR---GGRIVNITSVVGSA----- 169 (270)
T ss_dssp HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHH-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CCEEEEECchhhCC-----
Confidence 5 58999999999998888888999999999999999999999999999998876 68999999999887
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.
T Consensus 170 -----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 215 (270)
T 3ftp_A 170 -----------------GNPGQV-----------------NYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMT 215 (270)
T ss_dssp -----------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHH
T ss_pred -----------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcch
Confidence 777777 9999999999999999999999999999999999999976
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+.. +++..+.+...++.+|++.|+|++..++||+ ++.+.++||+++.+|||++
T Consensus 216 ~~~-------------------~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~~~~~itG~~i~vdGG~~ 268 (270)
T 3ftp_A 216 KGL-------------------PQEQQTALKTQIPLGRLGSPEDIAHAVAFLA----SPQAGYITGTTLHVNGGMF 268 (270)
T ss_dssp HHS-------------------CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSS
T ss_pred hhc-------------------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CCCcCCccCcEEEECCCcc
Confidence 542 1334456677889999999999999999999 9999999999999999964
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-46 Score=345.22 Aligned_cols=244 Identities=20% Similarity=0.267 Sum_probs=217.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-- 109 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-- 109 (366)
.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++++|++|.+++++++++.
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-GGTAQELAGDLSEAGAGTDLIERAEA 106 (275)
T ss_dssp HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-TCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999988888888664 678999999999999998887653
Q ss_pred -CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 -GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 -~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||.....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.++..
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~Iv~isS~~~~~---------- 173 (275)
T 4imr_A 107 IAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK---WGRVVSIGSINQLR---------- 173 (275)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS----------
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEECCHHhCC----------
Confidence 7999999999998888889999999999999999999999999999998876 68999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|++||+|+++|+++++.|++++||+||+|+||+|+|++......
T Consensus 174 ------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~ 224 (275)
T 4imr_A 174 ------------PKSVVT-----------------AYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRA 224 (275)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHH
T ss_pred ------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccc
Confidence 555556 899999999999999999999999999999999999998765432
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhh-hCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGI-KSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i-~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
. .+ +..+.+.... +.+|++.|+|++..++||+ |++++|+|||++.+|||+
T Consensus 225 ~---------------~~-~~~~~~~~~~~p~~r~~~pedvA~~v~fL~----s~~a~~itG~~i~vdGG~ 275 (275)
T 4imr_A 225 Q---------------DP-EGWDEYVRTLNWMGRAGRPEEMVGAALFLA----SEACSFMTGETIFLTGGY 275 (275)
T ss_dssp H---------------CH-HHHHHHHHHHSTTCSCBCGGGGHHHHHHHH----SGGGTTCCSCEEEESSCC
T ss_pred c---------------Ch-HHHHHHHhhcCccCCCcCHHHHHHHHHHHc----CcccCCCCCCEEEeCCCC
Confidence 1 12 3334555556 8999999999999999999 999999999999999995
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=347.88 Aligned_cols=264 Identities=26% Similarity=0.398 Sum_probs=215.7
Q ss_pred HHHcCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC------------chhHHHHHHHHHhhcCCeEEE
Q 017757 24 LIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS------------GKKLEEAKQSIQLATGIEVAT 91 (366)
Q Consensus 24 ~~~~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~ 91 (366)
....|..+..+++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++... +.++.+
T Consensus 15 ~~~~p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 93 (299)
T 3t7c_A 15 QTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-GRRIIA 93 (299)
T ss_dssp -------CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEE
T ss_pred cCCCCcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-CCceEE
Confidence 44556667778999999999999999999999999999999999987 56677777777654 678999
Q ss_pred EEecCCCHHHHHHHHHh----cCCCcEEEEcCCCCCCCC-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 017757 92 YSADVRDFDAVKTALDE----AGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPA 166 (366)
Q Consensus 92 ~~~Dls~~~~v~~~~~~----~~~id~vi~nAG~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g 166 (366)
+++|++|++++++++++ ++++|+||||||+..... +.+.+.++|++++++|+.|+++++++++|+|++++. .+
T Consensus 94 ~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--~g 171 (299)
T 3t7c_A 94 SQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR--GG 171 (299)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS--CE
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--Cc
Confidence 99999999999888765 589999999999887654 888999999999999999999999999999987542 58
Q ss_pred EEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccC
Q 017757 167 SIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD 246 (366)
Q Consensus 167 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~ 246 (366)
+||++||.++.. +.++.. .|++||+|+++|+++++.|++++
T Consensus 172 ~Iv~isS~~~~~----------------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~ 212 (299)
T 3t7c_A 172 SIVFTSSIGGLR----------------------GAENIG-----------------NYIASKHGLHGLMRTMALELGPR 212 (299)
T ss_dssp EEEEECCGGGTS----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEEEECChhhcc----------------------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999887 777777 99999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHH--HHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCch
Q 017757 247 DIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEV--AKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQR 324 (366)
Q Consensus 247 gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~ 324 (366)
||+||+|+||+|+|++........ ...........++. .......++ +|++.|+|++..++||+ |+.+
T Consensus 213 gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~----s~~a 282 (299)
T 3t7c_A 213 NIRVNIVCPSSVATPMLLNEPTYR-----MFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLV----SDDA 282 (299)
T ss_dssp TEEEEEEEESCBSSTTTSSHHHHH-----HHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHH----SGGG
T ss_pred CcEEEEEecCCccCccccccchhh-----hhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHh----Cccc
Confidence 999999999999999876422110 00000000112222 223445556 89999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHH
Q 017757 325 SVLMAFVEVVAAGLI 339 (366)
Q Consensus 325 ~~itG~~i~~dgG~~ 339 (366)
+|+||+++.+|||++
T Consensus 283 ~~itG~~i~vdGG~~ 297 (299)
T 3t7c_A 283 RYITGVSLPVDGGAL 297 (299)
T ss_dssp TTCCSCEEEESTTGG
T ss_pred ccCcCCEEeeCCCcc
Confidence 999999999999975
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=341.90 Aligned_cols=241 Identities=25% Similarity=0.297 Sum_probs=215.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++... +.++.++++|++|++++++++++
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-GGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999988888754 56889999999999999888875
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++. .++||++||..+..
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~--~g~iv~isS~~~~~---------- 174 (276)
T 3r1i_A 107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL--GGTIITTASMSGHI---------- 174 (276)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--CEEEEEECCGGGTS----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CcEEEEECchHhcc----------
Confidence 589999999999988888999999999999999999999999999999998752 48999999998865
Q ss_pred ccccccccccCCCC--CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 189 INENKLCESSGKGH--GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 189 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+. +... .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+..
T Consensus 175 ------------~~~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~ 225 (276)
T 3r1i_A 175 ------------INIPQQVS-----------------HYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL 225 (276)
T ss_dssp ------------CCCSSCCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG
T ss_pred ------------cCCCCCcc-----------------hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc
Confidence 22 2345 8999999999999999999999999999999999999987643
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. +..+.+...++.+|++.|+|++..++||+ |+.++|+|||++.+|||++
T Consensus 226 ~--------------------~~~~~~~~~~p~~r~~~pedvA~~v~fL~----s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 226 A--------------------DYHALWEPKIPLGRMGRPEELTGLYLYLA----SAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp G--------------------GGHHHHGGGSTTSSCBCGGGSHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred h--------------------HHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCccCcEEEECcCcc
Confidence 1 12234556789999999999999999999 9999999999999999975
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=341.84 Aligned_cols=239 Identities=24% Similarity=0.313 Sum_probs=212.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|++++++++++
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999998888777665 56789999999999999888775
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++. .++||++||..+..
T Consensus 78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~---------- 145 (247)
T 3rwb_A 78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK--AGRVISIASNTFFA---------- 145 (247)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCTHHHH----------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--CcEEEEECchhhcc----------
Confidence 589999999999988888999999999999999999999999999999988652 58999999999887
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|+++++.|++++||+||+|+||+|+|++......
T Consensus 146 ------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~ 196 (247)
T 3rwb_A 146 ------------GTPNMA-----------------AYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH 196 (247)
T ss_dssp ------------TCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG
T ss_pred ------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh
Confidence 777777 999999999999999999999999999999999999997654211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhh-hhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDG-IKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~-i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+. ....... .+.+|++.|+|++..+.||+ |++++|+|||++.+|||++
T Consensus 197 ------------------~~-~~~~~~~~~~~~r~~~pedva~~v~~L~----s~~~~~itG~~i~vdGG~~ 245 (247)
T 3rwb_A 197 ------------------NE-AFGFVEMLQAMKGKGQPEHIADVVSFLA----SDDARWITGQTLNVDAGMV 245 (247)
T ss_dssp ------------------GG-GHHHHHHHSSSCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSS
T ss_pred ------------------hH-HHHHHhcccccCCCcCHHHHHHHHHHHh----CccccCCCCCEEEECCCcc
Confidence 11 1122223 67899999999999999999 9999999999999999975
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-46 Score=341.34 Aligned_cols=245 Identities=26% Similarity=0.308 Sum_probs=216.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-TTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999888887653 56899999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|.+++. .++||++||..+..
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~---------- 148 (257)
T 3imf_A 81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI--KGNIINMVATYAWD---------- 148 (257)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CCEEEEECCGGGGS----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC--CcEEEEECchhhcc----------
Confidence 589999999999988888999999999999999999999999999999965432 68999999999887
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc-cCCcEEEEEcCCCCCCCChhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI-ADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++|+++++.|++ ++|||||+|+||+|+|++.....
T Consensus 149 ------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~ 199 (257)
T 3imf_A 149 ------------AGPGVI-----------------HSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKL 199 (257)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---
T ss_pred ------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhc
Confidence 677777 999999999999999999998 78999999999999999764321
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ..++..+.+...++.+|++.|+|++..++||+ ++.++|+||+++.+|||++
T Consensus 200 ~----------------~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~~~~~itG~~i~vdGG~~ 251 (257)
T 3imf_A 200 W----------------ISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLC----SDEAAYINGTCMTMDGGQH 251 (257)
T ss_dssp --------------------CCSHHHHTTSTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred c----------------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCccCCEEEECCCcc
Confidence 1 11233345677889999999999999999999 9999999999999999976
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=339.63 Aligned_cols=244 Identities=20% Similarity=0.235 Sum_probs=214.8
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
|..++++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|+++++++++
T Consensus 2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~ 77 (271)
T 3tzq_B 2 PGSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVVDLTNEVSVRALID 77 (271)
T ss_dssp -----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----CTTCEEEECCTTCHHHHHHHHH
T ss_pred CCCCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCCeEEEECCCCCHHHHHHHHH
Confidence 445677899999999999999999999999999999999999999888877766 5578899999999999988876
Q ss_pred h----cCCCcEEEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 108 E----AGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
+ ++++|++|||||... ...+.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 78 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~~~~--- 151 (271)
T 3tzq_B 78 FTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG---GGAIVNISSATAHA--- 151 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CEEEEEECCGGGTS---
T ss_pred HHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCEEEEECCHHHcC---
Confidence 5 589999999999873 45677899999999999999999999999999999876 68999999999877
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus 152 -------------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 195 (271)
T 3tzq_B 152 -------------------AYDMST-----------------AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTP 195 (271)
T ss_dssp -------------------BCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCT
T ss_pred -------------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCc
Confidence 666677 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+.+.. .+++..+.+....+.+|++.|+|++..+.||+ ++.++|+|||++.+|||+.
T Consensus 196 ~~~~~------------------~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~----s~~~~~itG~~i~vdGG~~ 251 (271)
T 3tzq_B 196 RLEVG------------------LPQPIVDIFATHHLAGRIGEPHEIAELVCFLA----SDRAAFITGQVIAADSGLL 251 (271)
T ss_dssp TTC---------------------CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred ccccc------------------CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CcccCCcCCCEEEECCCcc
Confidence 86531 12455667778889999999999999999999 9999999999999999943
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=341.72 Aligned_cols=248 Identities=21% Similarity=0.242 Sum_probs=220.1
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
...+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.++++|++|++++++++++
T Consensus 20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GSKAFGVRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999998887776654 56789999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~------- 165 (277)
T 4dqx_A 96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG---GGSIINTTSYTATS------- 165 (277)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT---CEEEEEECCGGGTS-------
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CcEEEEECchhhCc-------
Confidence 58999999999998888889999999999999999999999999999998865 68999999999887
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus 166 ---------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 213 (277)
T 4dqx_A 166 ---------------AIADRT-----------------AYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTK 213 (277)
T ss_dssp ---------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred ---------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhh
Confidence 777777 999999999999999999999999999999999999998554
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..... ..+.+..+.+....+.+|++.|+|++..++||+ ++.++|+||+++.+|||++.
T Consensus 214 ~~~~~-------------~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~----s~~~~~itG~~i~vdGG~~~ 271 (277)
T 4dqx_A 214 IFAEA-------------KDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA----SDRSRFATGSILTVDGGSSI 271 (277)
T ss_dssp HHHTC-------------SCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESSSSSS
T ss_pred hcccc-------------cchhHHHHHHHhcCcccCCcCHHHHHHHHHHHh----CCccCCCcCCEEEECCchhh
Confidence 32211 234555566778889999999999999999999 99999999999999999764
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-45 Score=338.86 Aligned_cols=254 Identities=20% Similarity=0.232 Sum_probs=219.6
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+.++.+++||++|||||++|||+++|++|+++|++|++++++ .+.+++..+++... +.++.++++|++|+++++++++
T Consensus 10 ~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 10 TYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp -CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHH
T ss_pred ccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHH
Confidence 345567999999999999999999999999999999998764 55667777777654 6789999999999999988876
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc-ccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA-GQCWTIK 182 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~-~~~~~~~ 182 (366)
+ ++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++ .|+||++||.. +..
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~---- 159 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-----GGRIVLTSSNTSKDF---- 159 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-----TCEEEEECCTTTTTC----
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCeEEEEeCchhccC----
Confidence 5 589999999999988888999999999999999999999999999999976 57999999987 333
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++
T Consensus 160 ------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 204 (270)
T 3is3_A 160 ------------------SVPKHS-----------------LYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204 (270)
T ss_dssp ------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred ------------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 556666 999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
........... .....+++..+.+....+.+|++.|+|++..++||+ |++++|+||+++.+|||+
T Consensus 205 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~----s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 205 FHEVSHHYIPN-------GTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLV----SKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp HHHHGGGGSTT-------GGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTC
T ss_pred hhhhhhhcccc-------ccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CCccCCccCcEEEeCCCC
Confidence 87543211100 012356777778888899999999999999999999 999999999999999996
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=342.87 Aligned_cols=249 Identities=18% Similarity=0.211 Sum_probs=197.7
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+.++.++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++... +.++.++++|++|+++++++++
T Consensus 21 ~~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~ 99 (280)
T 4da9_A 21 QSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-GARVIFLRADLADLSSHQATVD 99 (280)
T ss_dssp --CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECCTTSGGGHHHHHH
T ss_pred hhhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHH
Confidence 34556789999999999999999999999999999999995 777778877777654 6789999999999999888776
Q ss_pred h----cCCCcEEEEcCCC--CCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 108 E----AGPVDVLVVNQGV--FVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 108 ~----~~~id~vi~nAG~--~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
+ ++++|+||||||+ ....++.+.+.++|++++++|+.|+++++++++|+|++++.+..++||++||.++..
T Consensus 100 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--- 176 (280)
T 4da9_A 100 AVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM--- 176 (280)
T ss_dssp HHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------
T ss_pred HHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc---
Confidence 5 5899999999998 456788899999999999999999999999999999987644468999999999887
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus 177 -------------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 220 (280)
T 4da9_A 177 -------------------TSPERL-----------------DYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSD 220 (280)
T ss_dssp ----------------------CCH-----------------HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred -------------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCC
Confidence 667777 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHh-hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALD-GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+...... +..+.+.. .++.+|++.|+|++..++||+ |++++|+|||++.+|||++.
T Consensus 221 ~~~~~~~-------------------~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 221 MTAAVSG-------------------KYDGLIESGLVPMRRWGEPEDIGNIVAGLA----GGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp ----------------------------------------CCBCHHHHHHHHHHHH----TSTTGGGTTCEEEESTTCC-
T ss_pred chhhcch-------------------hHHHHHhhcCCCcCCcCCHHHHHHHHHHHh----CccccCCCCCEEEECCCccc
Confidence 8765321 11122223 578899999999999999999 99999999999999999764
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=341.26 Aligned_cols=247 Identities=29% Similarity=0.318 Sum_probs=218.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++
T Consensus 4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-TCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999888888653 66899999999999999888765
Q ss_pred cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc-cccccccCc
Q 017757 109 AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ-CWTIKNTNM 186 (366)
Q Consensus 109 ~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~ 186 (366)
++++|++|||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||..+. .
T Consensus 83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~~-------- 151 (280)
T 3tox_A 83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG---GGSLTFTSSFVGHTA-------- 151 (280)
T ss_dssp HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCSBTTTB--------
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEEcChhhCcC--------
Confidence 589999999999874 47888999999999999999999999999999999876 6899999999886 4
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus 152 --------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~ 200 (280)
T 3tox_A 152 --------------GFAGVA-----------------PYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFAN 200 (280)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGG
T ss_pred --------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhh
Confidence 556666 9999999999999999999999999999999999999986542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
... ..++..+.+....+.+|++.|+|++..++||+ ++.++|+|||++.+|||++..
T Consensus 201 ~~~---------------~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~~a~~itG~~i~vdGG~~~~ 256 (280)
T 3tox_A 201 LPG---------------AAPETRGFVEGLHALKRIARPEEIAEAALYLA----SDGASFVTGAALLADGGASVT 256 (280)
T ss_dssp STT---------------CCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGGC
T ss_pred ccc---------------cCHHHHHHHhccCccCCCcCHHHHHHHHHHHh----CccccCCcCcEEEECCCcccc
Confidence 110 12344556677789999999999999999999 999999999999999998754
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=342.76 Aligned_cols=257 Identities=25% Similarity=0.317 Sum_probs=211.2
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-------------CchhHHHHHHHHHhhcCCeEEEEEe
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-------------SGKKLEEAKQSIQLATGIEVATYSA 94 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-------------~~~~~~~~~~~l~~~~~~~v~~~~~ 94 (366)
|..+..+++||++|||||++|||+++|++|+++|++|++++| +.+.+++..+++... +.++.++.+
T Consensus 2 p~~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 80 (277)
T 3tsc_A 2 PGSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-NRRIVAAVV 80 (277)
T ss_dssp -----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CCccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEEC
Confidence 344566899999999999999999999999999999999998 566677766666544 678999999
Q ss_pred cCCCHHHHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEE
Q 017757 95 DVRDFDAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIAL 170 (366)
Q Consensus 95 Dls~~~~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~ 170 (366)
|++|++++++++++ ++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++. .++||+
T Consensus 81 D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--~g~iv~ 158 (277)
T 3tsc_A 81 DTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR--GGSIIL 158 (277)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--CEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC--CCEEEE
Confidence 99999999888765 589999999999988888999999999999999999999999999999988642 579999
Q ss_pred ecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEE
Q 017757 171 MSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHV 250 (366)
Q Consensus 171 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~V 250 (366)
+||.++.. +.++.. .|++||+|+++|+++++.|++++||+|
T Consensus 159 isS~~~~~----------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v 199 (277)
T 3tsc_A 159 ISSAAGMK----------------------MQPFMI-----------------HYTASKHAVTGLARAFAAELGKHSIRV 199 (277)
T ss_dssp ECCGGGTS----------------------CCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EccHhhCC----------------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHhCccCeEE
Confidence 99999887 777777 999999999999999999999999999
Q ss_pred EEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHH
Q 017757 251 SLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAF 330 (366)
Q Consensus 251 n~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~ 330 (366)
|+|+||+|+|++.......... ... ...++..+.+....+. |++.|+|++..++||+ |+.++|+||+
T Consensus 200 n~v~PG~v~T~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~p~-r~~~pedvA~~v~~L~----s~~~~~itG~ 266 (277)
T 3tsc_A 200 NSVHPGPVNTPMGSGDMVTAVG--QAM------ETNPQLSHVLTPFLPD-WVAEPEDIADTVCWLA----SDESRKVTAA 266 (277)
T ss_dssp EEEEESSBSSGGGSHHHHHHHH--HHH------HTCGGGTTTTCCSSSC-SCBCHHHHHHHHHHHH----SGGGTTCCSC
T ss_pred EEEEeCCCcCCcccchhhhhhh--hcc------cccHHHHHHhhhccCC-CCCCHHHHHHHHHHHh----CccccCCcCC
Confidence 9999999999987542110000 000 0000111112223343 7899999999999999 9999999999
Q ss_pred HHHHHHHHH
Q 017757 331 VEVVAAGLI 339 (366)
Q Consensus 331 ~i~~dgG~~ 339 (366)
++.+|||++
T Consensus 267 ~i~vdGG~~ 275 (277)
T 3tsc_A 267 QIPVDQGST 275 (277)
T ss_dssp EEEESTTGG
T ss_pred EEeeCCCcc
Confidence 999999976
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=341.60 Aligned_cols=249 Identities=23% Similarity=0.251 Sum_probs=210.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++
T Consensus 23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-GGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999988888654 56899999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+... .++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.++...
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~Iv~isS~~~~~~------- 171 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG---GGAIVVVSSINGTRT------- 171 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCSBTTTB-------
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CceEEEEcChhhccC-------
Confidence 5899999999998754 7888999999999999999999999999999999876 689999999887540
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
.+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+..
T Consensus 172 -------------~~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 221 (283)
T 3v8b_A 172 -------------FTTPGAT-----------------AYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT 221 (283)
T ss_dssp -------------CCSTTCH-----------------HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT
T ss_pred -------------CCCCCch-----------------HHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc
Confidence 0234455 8999999999999999999999999999999999999987643
Q ss_pred hhcCCcchhhhhccCCCCCHHHH---HHHHHhhhhC--CCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEV---AKKALDGIKS--GSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~---a~~~~~~i~~--gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.... .++. .+.....++. +|++.|+|++..++||+ |++++|+|||++.+|||++.
T Consensus 222 ~~~~---------------~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~----s~~a~~itG~~i~vdGG~~~ 281 (283)
T 3v8b_A 222 KLRH---------------EEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLV----SERARHVTGSPVWIDGGQGL 281 (283)
T ss_dssp TBCC---------------HHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTHHH
T ss_pred cccc---------------chhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHc----CccccCCcCCEEEECcCccc
Confidence 2110 0000 0112233455 99999999999999999 99999999999999999874
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=339.12 Aligned_cols=239 Identities=28% Similarity=0.368 Sum_probs=214.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.++++||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++... +.++.++++|++|++++++++++
T Consensus 23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-GGEAFAVKADVSQESEVEALFAAVI 101 (269)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999998 666777777777654 66899999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||+.....+.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.++..
T Consensus 102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~-------- 170 (269)
T 4dmm_A 102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR---SGRIINIASVVGEM-------- 170 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCHHHHH--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEECchhhcC--------
Confidence 58999999999998888889999999999999999999999999999999876 68999999999887
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus 171 --------------~~~~~~-----------------~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 219 (269)
T 4dmm_A 171 --------------GNPGQA-----------------NYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL 219 (269)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH
T ss_pred --------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc
Confidence 677777 9999999999999999999999999999999999999986542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCC-chhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSP-QRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~-~~~~itG~~i~~dgG~~ 339 (366)
. .+.+...++.+|++.|+|++..++||+ ++ .++|+|||++.+|||++
T Consensus 220 ~----------------------~~~~~~~~p~~r~~~~~dvA~~v~~l~----s~~~~~~itG~~i~vdGG~~ 267 (269)
T 4dmm_A 220 A----------------------AEKLLEVIPLGRYGEAAEVAGVVRFLA----ADPAAAYITGQVINIDGGLV 267 (269)
T ss_dssp H----------------------HHHHGGGCTTSSCBCHHHHHHHHHHHH----HCGGGGGCCSCEEEESTTSC
T ss_pred c----------------------HHHHHhcCCCCCCCCHHHHHHHHHHHh----CCcccCCCcCCEEEECCCee
Confidence 1 145567789999999999999999999 87 89999999999999975
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=333.63 Aligned_cols=250 Identities=26% Similarity=0.344 Sum_probs=216.3
Q ss_pred cCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Q 017757 27 RPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 27 ~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~ 106 (366)
.++++..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|++|++++++++
T Consensus 11 ~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~ 90 (267)
T 1vl8_A 11 HHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL 90 (267)
T ss_dssp ------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 45567788999999999999999999999999999999999999988888887774444678899999999999998887
Q ss_pred Hh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc-cccccc
Q 017757 107 DE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA-GQCWTI 181 (366)
Q Consensus 107 ~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~-~~~~~~ 181 (366)
++ ++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.. +..
T Consensus 91 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~~~~~--- 164 (267)
T 1vl8_A 91 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD---NPSIINIGSLTVEEV--- 164 (267)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS---SCEEEEECCGGGTCC---
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CcEEEEECCcchhcc---
Confidence 65 58999999999998878888999999999999999999999999999998765 68999999988 665
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|+
T Consensus 165 -------------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 208 (267)
T 1vl8_A 165 -------------------TMPNIS-----------------AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTK 208 (267)
T ss_dssp -------------------CSSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCST
T ss_pred -------------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccc
Confidence 556666 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+...... . ++..+.+....+.+|++.|+|++..++||+ ++.++++||+.+.+|||++
T Consensus 209 ~~~~~~~----------------~-~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~----s~~~~~itG~~i~vdGG~~ 265 (267)
T 1vl8_A 209 MTEAVFS----------------D-PEKLDYMLKRIPLGRTGVPEDLKGVAVFLA----SEEAKYVTGQIIFVDGGWT 265 (267)
T ss_dssp TTHHHHT----------------C-HHHHHHHHHTCTTSSCBCGGGGHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred ccccccc----------------C-hHHHHHHHhhCCCCCCcCHHHHHHHHHHHc----CccccCCcCCeEEECCCCC
Confidence 8764321 1 223344556678899999999999999999 9999999999999999975
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=341.56 Aligned_cols=243 Identities=25% Similarity=0.349 Sum_probs=211.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.++++|++|++++++++++
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999998888777665 56788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||..+..
T Consensus 101 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~Iv~isS~~~~~---------- 167 (277)
T 3gvc_A 101 FGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG---GGAIVNLSSLAGQV---------- 167 (277)
T ss_dssp HSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CEEEEEECCGGGTS----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEEcchhhcc----------
Confidence 58999999999998888889999999999999999999999999999999876 68999999999887
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+....
T Consensus 168 ------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~ 218 (277)
T 3gvc_A 168 ------------AVGGTG-----------------AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMA 218 (277)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHT
T ss_pred ------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhh
Confidence 777777 999999999999999999999999999999999999998765432
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHH---HhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKA---LDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~---~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.. +++..+.. ....+.+|++.|+|++..++||+ |++++++|||++.+|||++.
T Consensus 219 ~~---------------~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~----s~~a~~itG~~i~vdGG~~~ 274 (277)
T 3gvc_A 219 MF---------------DGALGAGGARSMIARLQGRMAAPEEMAGIVVFLL----SDDASMITGTTQIADGGTIA 274 (277)
T ss_dssp CC---------------------CCHHHHHHHHHSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred cc---------------hhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHc----CCccCCccCcEEEECCcchh
Confidence 11 11111111 12567799999999999999999 99999999999999999764
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=335.80 Aligned_cols=239 Identities=27% Similarity=0.359 Sum_probs=215.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+++|++|||||++|||+++|++|+++|++|++++| +.++++++.+++... +.++.++++|++|++++++++++ +
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999887 556777777777654 67899999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.++..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~----------- 146 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR---SGAIINLSSVVGAV----------- 146 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHH-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CCEEEEEcchhhcC-----------
Confidence 8999999999998888889999999999999999999999999999998876 68999999999887
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus 147 -----------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--- 195 (246)
T 3osu_A 147 -----------GNPGQA-----------------NYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--- 195 (246)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS---
T ss_pred -----------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc---
Confidence 677777 9999999999999999999999999999999999999976431
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++..+.+...++.+|++.|+|++..+.||+ ++.++++||+++.+|||++
T Consensus 196 ----------------~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~----s~~~~~itG~~i~vdgG~~ 245 (246)
T 3osu_A 196 ----------------SDELKEQMLTQIPLARFGQDTDIANTVAFLA----SDKAKYITGQTIHVNGGMY 245 (246)
T ss_dssp ----------------CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTSC
T ss_pred ----------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCCCCEEEeCCCcc
Confidence 2445567778899999999999999999999 9999999999999999964
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-45 Score=334.10 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=218.0
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
++.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|++++++++++
T Consensus 2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999998888777766 45688999999999998887765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++. .++||++||.++..
T Consensus 78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~-------- 147 (259)
T 4e6p_A 78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGR--GGKIINMASQAGRR-------- 147 (259)
T ss_dssp HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--CEEEEEECCGGGTS--------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CeEEEEECChhhcc--------
Confidence 689999999999988888899999999999999999999999999999988642 58999999999887
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+..
T Consensus 148 --------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 196 (259)
T 4e6p_A 148 --------------GEALVA-----------------IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV 196 (259)
T ss_dssp --------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH
T ss_pred --------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh
Confidence 777777 9999999999999999999999999999999999999987754
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...... .. ....++..+.+....+.+|++.|+|++..++||+ |++++|+|||++.+|||++
T Consensus 197 ~~~~~~---~~-----~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~----s~~~~~itG~~i~vdgG~~ 257 (259)
T 4e6p_A 197 DALFAR---YE-----NRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLA----SAESDYIVSQTYNVDGGNW 257 (259)
T ss_dssp HHHHHH---HH-----TCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTT----SGGGTTCCSCEEEESTTSS
T ss_pred hhhhhh---hc-----cCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHh----CCccCCCCCCEEEECcChh
Confidence 211000 00 0112344566677889999999999999999999 9999999999999999964
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=339.66 Aligned_cols=243 Identities=22% Similarity=0.284 Sum_probs=213.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++++|++|++++++++++
T Consensus 4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999998888777665 45789999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++ .++||++||.++..
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-----~g~iv~isS~~~~~---------- 144 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-----GGSIVFTSSVADEG---------- 144 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEECCGGGSS----------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-----CCEEEEECChhhcC----------
Confidence 589999999999988888999999999999999999999999999999866 47999999999887
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++......
T Consensus 145 ------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~ 195 (255)
T 4eso_A 145 ------------GHPGMS-----------------VYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGI 195 (255)
T ss_dssp ------------BCTTBH-----------------HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTS
T ss_pred ------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccC
Confidence 667777 999999999999999999999999999999999999998653210
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
.. ...++..+......+.+|++.|+|++..++||+ |+ ++|+||+++.+|||++..
T Consensus 196 ~~-------------~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~-~~~itG~~i~vdGG~~~~ 250 (255)
T 4eso_A 196 TE-------------AERAEFKTLGDNITPMKRNGTADEVARAVLFLA----FE-ATFTTGAKLAVDGGLGQK 250 (255)
T ss_dssp CH-------------HHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH----HT-CTTCCSCEEEESTTTTTT
T ss_pred Ch-------------hhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHc----Cc-CcCccCCEEEECCCcccc
Confidence 00 012344455667789999999999999999999 88 899999999999998754
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=337.72 Aligned_cols=257 Identities=23% Similarity=0.310 Sum_probs=212.2
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC------------chhHHHHHHHHHhhcCCeEEEEEecCCC
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS------------GKKLEEAKQSIQLATGIEVATYSADVRD 98 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~~~~Dls~ 98 (366)
.+.+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++... +.++.++++|++|
T Consensus 4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~ 82 (281)
T 3s55_A 4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-GRRCISAKVDVKD 82 (281)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-TCCEEEEECCTTC
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-CCeEEEEeCCCCC
Confidence 3467999999999999999999999999999999999997 45556666655543 6789999999999
Q ss_pred HHHHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 99 FDAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 99 ~~~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
++++++++++ ++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~ 159 (281)
T 3s55_A 83 RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN---YGRIVTVSSM 159 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCG
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEECCh
Confidence 9999888765 58999999999998888889999999999999999999999999999998876 6899999999
Q ss_pred ccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEc
Q 017757 175 AGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIF 254 (366)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~ 254 (366)
.+.. +.++.. .|++||+|+++|+++++.|++++||+||+|+
T Consensus 160 ~~~~----------------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~ 200 (281)
T 3s55_A 160 LGHS----------------------ANFAQA-----------------SYVSSKWGVIGLTKCAAHDLVGYGITVNAVA 200 (281)
T ss_dssp GGGS----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEE
T ss_pred hhcC----------------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEe
Confidence 9887 667777 9999999999999999999999999999999
Q ss_pred CCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHH--HHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHH
Q 017757 255 PPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKK--ALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVE 332 (366)
Q Consensus 255 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i 332 (366)
||+|+|++........... +.......++..+. .....+ ++++.|+|++..++||+ ++.++|+||+++
T Consensus 201 PG~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dvA~~v~~L~----s~~~~~itG~~i 270 (281)
T 3s55_A 201 PGNIETPMTHNDFVFGTMR-----PDLEKPTLKDVESVFASLHLQY-APFLKPEEVTRAVLFLV----DEASSHITGTVL 270 (281)
T ss_dssp ECSBCSTTTSSHHHHHC------------CCHHHHHHHHHHHCSSS-CSCBCHHHHHHHHHHHH----SGGGTTCCSCEE
T ss_pred cCcccCccccchhhhcccc-----ccccccchhHHHHHHHhhhccC-cCCCCHHHHHHHHHHHc----CCcccCCCCCEE
Confidence 9999999875421100000 00000112222221 222233 89999999999999999 999999999999
Q ss_pred HHHHHHHH
Q 017757 333 VVAAGLIR 340 (366)
Q Consensus 333 ~~dgG~~~ 340 (366)
.+|||++.
T Consensus 271 ~vdgG~~~ 278 (281)
T 3s55_A 271 PIDAGATA 278 (281)
T ss_dssp EESTTGGG
T ss_pred EECCCccc
Confidence 99999764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=338.97 Aligned_cols=240 Identities=27% Similarity=0.328 Sum_probs=204.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.|.++||++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++... +.++.++++|++|++++++++++
T Consensus 22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-GGKALTAQADVSDPAAVRRLFATAE 100 (267)
T ss_dssp -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999988 55666777777777654 66899999999999999988765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|.|++ .|+||++||..+..
T Consensus 101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-----~g~iv~isS~~~~~-------- 167 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-----GGRIINMSTSQVGL-------- 167 (267)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCTHHHH--------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CCeEEEEeChhhcc--------
Confidence 589999999999988888999999999999999999999999999999965 47999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus 168 --------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 216 (267)
T 3u5t_A 168 --------------LHPSYG-----------------IYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG 216 (267)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------
T ss_pred --------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc
Confidence 667777 9999999999999999999999999999999999999986542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
. .++..+.+....+.+|++.|+|++..++||+ |+.+.|+|||++.+|||+
T Consensus 217 ~------------------~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~~~~~itG~~i~vdGG~ 266 (267)
T 3u5t_A 217 K------------------SDEVRDRFAKLAPLERLGTPQDIAGAVAFLA----GPDGAWVNGQVLRANGGI 266 (267)
T ss_dssp ----------------------CHHHHHTSSTTCSCBCHHHHHHHHHHHH----STTTTTCCSEEEEESSSC
T ss_pred C------------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCccCCEEEeCCCc
Confidence 1 2334456677889999999999999999999 999999999999999995
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=337.22 Aligned_cols=240 Identities=27% Similarity=0.402 Sum_probs=210.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.++++||++|||||++|||+++|++|+++|++|++++++ .+.++++.+++... +.++.++++|++|++++++++++
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-GGRAVAIRADNRDAEAIEQAIRETV 104 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999998665 46677777777654 67899999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+....++.+.+.++|++++++|+.++++++++++|.|++ .++||++||..+...
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-----~g~iv~isS~~~~~~------- 172 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-----GGRIITIGSNLAELV------- 172 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-----TCEEEEECCGGGTCC-------
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCEEEEEeChhhccC-------
Confidence 589999999999988889999999999999999999999999999999965 579999999776540
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus 173 --------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~ 221 (271)
T 3v2g_A 173 --------------PWPGIS-----------------LYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD 221 (271)
T ss_dssp --------------CSTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS
T ss_pred --------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc
Confidence 245666 9999999999999999999999999999999999999986431
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+..+.....++.+|++.|+|++..++||+ |++++|+|||++.+|||++
T Consensus 222 --------------------~~~~~~~~~~~~~~r~~~pedvA~~v~fL~----s~~~~~itG~~i~vdGG~~ 270 (271)
T 3v2g_A 222 --------------------GDHAEAQRERIATGSYGEPQDIAGLVAWLA----GPQGKFVTGASLTIDGGAN 270 (271)
T ss_dssp --------------------CSSHHHHHHTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred --------------------chhHHHHHhcCCCCCCCCHHHHHHHHHHHh----CcccCCccCCEEEeCcCcc
Confidence 011234556789999999999999999999 9999999999999999975
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=332.18 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=212.8
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++++|++|++++++++++
T Consensus 15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 15 GRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp -CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999998888888777654 56789999999999999888765
Q ss_pred --c-CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 --A-GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 --~-~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
+ +++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||.++..
T Consensus 94 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---~g~iv~isS~~~~~------- 163 (273)
T 1ae1_A 94 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ---NGNVIFLSSIAGFS------- 163 (273)
T ss_dssp HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---SEEEEEECCGGGTS-------
T ss_pred HHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEcCHhhcC-------
Confidence 5 8999999999998778888999999999999999999999999999998865 68999999999876
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++...
T Consensus 164 ---------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 211 (273)
T 1ae1_A 164 ---------------ALPSVS-----------------LYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVET 211 (273)
T ss_dssp ---------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred ---------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhh
Confidence 666666 999999999999999999999999999999999999998654
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.....+ ..++..+.+....+.+|++.|+|++..+.||+ ++.++++||+++.+|||++
T Consensus 212 ~~~~~~-------------~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~----s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 212 AIKKNP-------------HQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC----FPAASYITGQIIWADGGFT 268 (273)
T ss_dssp --------------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred hhhccc-------------CcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCcCCCEEEECCCcc
Confidence 211000 01233445566788999999999999999999 9999999999999999975
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=334.62 Aligned_cols=251 Identities=27% Similarity=0.343 Sum_probs=210.4
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-------------CchhHHHHHHHHHhhcCCeEEEEEecCC
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-------------SGKKLEEAKQSIQLATGIEVATYSADVR 97 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-------------~~~~~~~~~~~l~~~~~~~v~~~~~Dls 97 (366)
.+.+++||++|||||++|||+++|++|+++|++|++++| +.++++++.+++... +.++.++++|++
T Consensus 9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~ 87 (280)
T 3pgx_A 9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-GRKALTRVLDVR 87 (280)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-TCCEEEEECCTT
T ss_pred cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEEcCCC
Confidence 345799999999999999999999999999999999998 667777777777654 678999999999
Q ss_pred CHHHHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 98 DFDAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 98 ~~~~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
|++++++++++ ++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++. .++||++||
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--~g~iv~isS 165 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN--GGSIVVVSS 165 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS--CEEEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CCEEEEEcc
Confidence 99999888765 589999999999988888999999999999999999999999999999988642 589999999
Q ss_pred CccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEE
Q 017757 174 QAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLI 253 (366)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V 253 (366)
.++.. +.++.. .|++||+|+++|+++++.|++++||+||+|
T Consensus 166 ~~~~~----------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~vn~v 206 (280)
T 3pgx_A 166 SAGLK----------------------ATPGNG-----------------HYSASKHGLTALTNTLAIELGEYGIRVNSI 206 (280)
T ss_dssp GGGTS----------------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred hhhcc----------------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence 99887 777777 999999999999999999999999999999
Q ss_pred cCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHH--HHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHH
Q 017757 254 FPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKK--ALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFV 331 (366)
Q Consensus 254 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~ 331 (366)
+||+|+|++.+...... .... .++ ..+. .....+. |++.|+|++..++||+ |+.++|+|||+
T Consensus 207 ~PG~v~t~~~~~~~~~~-----~~~~-----~~~-~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~----s~~~~~itG~~ 270 (280)
T 3pgx_A 207 HPYSVETPMIEPEAMME-----IFAR-----HPS-FVHSFPPMPVQPN-GFMTADEVADVVAWLA----GDGSGTLTGTQ 270 (280)
T ss_dssp EECSBCSTTCCHHHHHH-----HHHH-----CGG-GGGGSCCBTTBCS-SCBCHHHHHHHHHHHH----SGGGTTCSSCE
T ss_pred eeCcccCcccchhhhhh-----hhhc-----Cch-hhhhhhhcccCCC-CCCCHHHHHHHHHHHh----CccccCCCCCE
Confidence 99999999876421100 0000 000 0000 1112233 6889999999999999 99999999999
Q ss_pred HHHHHHHH
Q 017757 332 EVVAAGLI 339 (366)
Q Consensus 332 i~~dgG~~ 339 (366)
+.+|||++
T Consensus 271 i~vdGG~~ 278 (280)
T 3pgx_A 271 IPVDKGAL 278 (280)
T ss_dssp EEESTTGG
T ss_pred EEECCCcc
Confidence 99999975
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=332.06 Aligned_cols=250 Identities=26% Similarity=0.335 Sum_probs=202.9
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
|..|++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++.+|++|.+++++++++
T Consensus 2 p~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 77 (261)
T 3n74_A 2 PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GDAALAVAADISKEADVDAAVEAA 77 (261)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999998888777655 55789999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCcEEEEecCCccccccccc
Q 017757 109 ---AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQ-NGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~-~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||... ...+.+.+.++|++++++|+.++++++++++|+|++++ .+..++||++||..+..
T Consensus 78 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----- 152 (261)
T 3n74_A 78 LSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR----- 152 (261)
T ss_dssp HHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS-----
T ss_pred HHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC-----
Confidence 589999999999876 57778889999999999999999999999999998864 22357899999998877
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.+... .|++||+|+++|+++++.|++++||+||+|+||+++|++.
T Consensus 153 -----------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 198 (261)
T 3n74_A 153 -----------------PRPNLA-----------------WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLL 198 (261)
T ss_dssp -----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred -----------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhh
Confidence 777777 8999999999999999999999999999999999999987
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
+..... ..++..+.+....+.+|+..|+|++..++||+ ++++.++||+++.+|||++..
T Consensus 199 ~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~itG~~i~vdgG~~~~ 257 (261)
T 3n74_A 199 TTFMGE---------------DSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLC----SPQASMITGVALDVDGGRSIG 257 (261)
T ss_dssp ---------------------------------CTTSSCCCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTTTC-
T ss_pred hhhccc---------------CcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHc----CCcccCcCCcEEEecCCcccC
Confidence 654321 23455566777889999999999999999999 999999999999999998753
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=328.25 Aligned_cols=241 Identities=24% Similarity=0.332 Sum_probs=219.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++++|++|++++++++++
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-GFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999999999988888888665 66899999999999999988876
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+.....+.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 146 (247)
T 3lyl_A 80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR---WGRIISIGSVVGSA---------- 146 (247)
T ss_dssp TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCTHHHH----------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CeEEEEEcchhhcc----------
Confidence 57899999999998888888999999999999999999999999999998876 68999999999887
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus 147 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-- 195 (247)
T 3lyl_A 147 ------------GNPGQT-----------------NYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL-- 195 (247)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--
T ss_pred ------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--
Confidence 777777 9999999999999999999999999999999999999986542
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++..+.+....+.+++..|+|++..+.||+ ++.+.++||+++.+|||++
T Consensus 196 -----------------~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~----s~~~~~~tG~~i~vdgG~~ 245 (247)
T 3lyl_A 196 -----------------TDEQKSFIATKIPSGQIGEPKDIAAAVAFLA----SEEAKYITGQTLHVNGGMY 245 (247)
T ss_dssp -----------------CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSS
T ss_pred -----------------cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHh----CCCcCCccCCEEEECCCEe
Confidence 1334455667789999999999999999999 9999999999999999975
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=329.79 Aligned_cols=253 Identities=23% Similarity=0.290 Sum_probs=215.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999998888888777654 56789999999999999887765
Q ss_pred cCCCcEEEEcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 AGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 ~~~id~vi~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||.. ...++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--------- 149 (262)
T 1zem_A 82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN---YGRIVNTASMAGVK--------- 149 (262)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHS---------
T ss_pred hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEcchhhcc---------
Confidence 58999999999987 667788899999999999999999999999999998865 68999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+.+|+++++.|++++||+||+|+||+++|++.....
T Consensus 150 -------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 199 (262)
T 1zem_A 150 -------------GPPNMA-----------------AYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQ 199 (262)
T ss_dssp -------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHH
T ss_pred -------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhc
Confidence 666666 99999999999999999999999999999999999999865421
Q ss_pred hcCCcchhhhhccCCCC--CHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAM--KADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~--~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
... .... ..... .++...+.+...+|.+|++.|+|++..++||+ ++.++|+||+++.+|||
T Consensus 200 ~~~---~~~~--~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~----s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 200 VEL---QAKV--GSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLL----GDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp HHH---HHHH--TCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHH----SGGGTTCCSCEEEESCC
T ss_pred cch---hhhc--cccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCcCCcEEecCCC
Confidence 000 0000 00001 12324455666789999999999999999999 99999999999999997
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=330.69 Aligned_cols=252 Identities=25% Similarity=0.298 Sum_probs=216.2
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.+.+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++.++++|++|++++++++++
T Consensus 6 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 85 (267)
T 1iy8_A 6 SPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA 85 (267)
T ss_dssp ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999988888887776543 56789999999999999888765
Q ss_pred ----cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|.|++++ .++||++||..+..
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~----- 157 (267)
T 1iy8_A 86 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG---SGMVVNTASVGGIR----- 157 (267)
T ss_dssp HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCGGGTS-----
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CCEEEEEcchhhcc-----
Confidence 5899999999998766 7788899999999999999999999999999998875 68999999998876
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.
T Consensus 158 -----------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 203 (267)
T 1iy8_A 158 -----------------GIGNQS-----------------GYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMV 203 (267)
T ss_dssp -----------------BCSSBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred -----------------CCCCCc-----------------cHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcch
Confidence 566666 9999999999999999999999999999999999999986
Q ss_pred hhhhhc-CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKR-RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...... .+ ...++..+.+...++.+|++.|+|++..++||+ ++.++|+||+++.+|||++
T Consensus 204 ~~~~~~~~~------------~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~----s~~~~~~tG~~i~vdGG~~ 264 (267)
T 1iy8_A 204 ENSMKQLDP------------ENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL----SDDASYVNATVVPIDGGQS 264 (267)
T ss_dssp HHHHHHHCT------------TCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTTT
T ss_pred hccccccCh------------hhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHc----CccccCCCCCEEEECCCcc
Confidence 543100 00 012333345566678899999999999999999 9999999999999999975
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=330.83 Aligned_cols=244 Identities=22% Similarity=0.228 Sum_probs=210.7
Q ss_pred CcCCCCCEEEEEcCC-ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGS-SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas-~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
...++||++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++....+.++.++++|++|++++++++++
T Consensus 17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 345899999999997 59999999999999999999999999999999988776667899999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++. .++||++||..+..
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~iv~~sS~~~~~-------- 166 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH--GGVIVNNASVLGWR-------- 166 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC--CEEEEEECCGGGTC--------
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CeEEEEeCCHHHcC--------
Confidence 589999999999988888899999999999999999999999999999998632 68999999999877
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+..
T Consensus 167 --------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 215 (266)
T 3o38_A 167 --------------AQHSQS-----------------HYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT 215 (266)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred --------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc
Confidence 667777 9999999999999999999999999999999999999987653
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
. .++..+.+....+.+|+..|+|++..+.||+ ++.+.++||+++.+|||+
T Consensus 216 ~------------------~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~----s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 216 S------------------SSELLDRLASDEAFGRAAEPWEVAATIAFLA----SDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp -----------------------------CCTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESSCC
T ss_pred C------------------cHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc----CccccCccCCEEEEcCCc
Confidence 2 2344455667788999999999999999999 999999999999999996
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-45 Score=337.60 Aligned_cols=241 Identities=17% Similarity=0.185 Sum_probs=200.4
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc---hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG---KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
..++++||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++... +.++.++++|++|+++++++++
T Consensus 5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-TCEEEEEECCCCSHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHH
Confidence 45789999999999999999999999999999999987754 4566666666554 6789999999999999998887
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
+ ++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-----~g~iv~isS~~~~~----- 153 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-----NGHIITIATSLLAA----- 153 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-----EEEEEEECCCHHHH-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-----CCEEEEEechhhcc-----
Confidence 5 589999999999988888999999999999999999999999999999943 57999999998876
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+.+|+++++.|++++||+||+|+||+|+|++.
T Consensus 154 -----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~ 199 (262)
T 3ksu_A 154 -----------------YTGFYS-----------------TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF 199 (262)
T ss_dssp -----------------HHCCCC-----------------C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHH
T ss_pred -----------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc
Confidence 555666 8999999999999999999999999999999999999986
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.... .++..+......+.+|++.|+|++..++||+ ++ +.|+||+++.+|||++
T Consensus 200 ~~~~------------------~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~----s~-~~~itG~~i~vdGg~~ 252 (262)
T 3ksu_A 200 YGQE------------------TKESTAFHKSQAMGNQLTKIEDIAPIIKFLT----TD-GWWINGQTIFANGGYT 252 (262)
T ss_dssp HTCC------------------------------CCCCSCCGGGTHHHHHHHH----TT-TTTCCSCEEEESTTCC
T ss_pred cccC------------------chHHHHHHHhcCcccCCCCHHHHHHHHHHHc----CC-CCCccCCEEEECCCcc
Confidence 5421 1222344556678999999999999999999 98 9999999999999965
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=326.15 Aligned_cols=238 Identities=23% Similarity=0.296 Sum_probs=208.8
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecC--CCHHHHHHHHH
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV--RDFDAVKTALD 107 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dl--s~~~~v~~~~~ 107 (366)
+....++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|+ +|+++++++++
T Consensus 5 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 5 PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp CCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHH
Confidence 4456799999999999999999999999999999999999999999999888877666889999999 99999888776
Q ss_pred h----cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 108 E----AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
+ ++++|++|||||+.. ..++.+.++++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---~g~iv~isS~~~~~---- 157 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD---AGSLVFTSSSVGRQ---- 157 (252)
T ss_dssp HHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS---SCEEEEECCGGGTS----
T ss_pred HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC---CCEEEEECChhhcc----
Confidence 5 589999999999864 46788899999999999999999999999999999876 68999999999887
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+++|+++++.|++++ ||||+|+||+|+|++
T Consensus 158 ------------------~~~~~~-----------------~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~ 201 (252)
T 3f1l_A 158 ------------------GRANWG-----------------AYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAM 201 (252)
T ss_dssp ------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHH
T ss_pred ------------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCch
Confidence 777777 99999999999999999999987 999999999999997
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
........ +.+++..|+|++..++||+ +++++|+||+++.+|||....
T Consensus 202 ~~~~~~~~---------------------------~~~~~~~p~dva~~~~~L~----s~~~~~itG~~i~vdgG~~~~ 249 (252)
T 3f1l_A 202 RASAFPTE---------------------------DPQKLKTPADIMPLYLWLM----GDDSRRKTGMTFDAQPGRKPG 249 (252)
T ss_dssp HHHHCTTC---------------------------CGGGSBCTGGGHHHHHHHH----SGGGTTCCSCEEESSCC----
T ss_pred hhhhCCcc---------------------------chhccCCHHHHHHHHHHHc----CccccCCCCCEEEeCCCcCCC
Confidence 65432110 1235788999999999999 999999999999999998654
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=333.62 Aligned_cols=247 Identities=24% Similarity=0.315 Sum_probs=206.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|++++++++++
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999999999999988877665543 56889999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCC-Cc----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 AGPVDVLVVNQGVFVPG-EL----EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~-~~----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||+.... .+ .+.+.++|++++++|+.++++++++++|+|+++ .++||++||..+..
T Consensus 77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~----~g~iv~isS~~~~~----- 147 (281)
T 3zv4_A 77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS----RGSVVFTISNAGFY----- 147 (281)
T ss_dssp HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCGGGTS-----
T ss_pred cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCeEEEEecchhcc-----
Confidence 58999999999986542 22 245577899999999999999999999999875 37999999999887
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+++|+++++.|++++ ||||+|+||+|+|++.
T Consensus 148 -----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~ 192 (281)
T 3zv4_A 148 -----------------PNGGGP-----------------LYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLR 192 (281)
T ss_dssp -----------------SSSSCH-----------------HHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--C
T ss_pred -----------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcc
Confidence 677777 99999999999999999999987 9999999999999986
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCC-CchhHHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLS-PQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s-~~~~~itG~~i~~dgG~~~ 340 (366)
......... ......+..+.+...++.+|++.|+|++..++||+ | +.+.|+|||++.+|||++.
T Consensus 193 ~~~~~~~~~---------~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~----s~~~~~~itG~~i~vdGG~~~ 257 (281)
T 3zv4_A 193 GPSSLGLSE---------QSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFA----TRGDSLPATGALLNYDGGMGV 257 (281)
T ss_dssp CCTTCC-----------------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHH----STTTSTTCSSCEEEESSSGGG
T ss_pred ccccccccc---------ccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhh----cccccccccCcEEEECCCCcc
Confidence 532111000 00111224556777889999999999999999999 8 8999999999999999874
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-44 Score=335.46 Aligned_cols=243 Identities=16% Similarity=0.083 Sum_probs=212.9
Q ss_pred CcCCCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 32 RIPIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.++++||++|||||+| |||+++|++|+++|++|++++|+.+..+.+.+..... + .+.++++|++|++++++++++
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-G-VKLTVPCDVSDAESVDNMFKVL 102 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-T-CCEEEECCTTCHHHHHHHHHHH
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-C-CeEEEEcCCCCHHHHHHHHHHH
Confidence 4678999999999997 9999999999999999999999976655544443332 3 468899999999999988876
Q ss_pred ---cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
++++|+||||||+... .++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-----~g~IV~isS~~~~~--- 174 (296)
T 3k31_A 103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-----GGSILTLSYYGAEK--- 174 (296)
T ss_dssp HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-----CEEEEEEECGGGTS---
T ss_pred HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCEEEEEEehhhcc---
Confidence 5899999999998764 67888999999999999999999999999999976 58999999999877
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus 175 -------------------~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~ 218 (296)
T 3k31_A 175 -------------------VVPHYN-----------------VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTL 218 (296)
T ss_dssp -------------------CCTTTT-----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCS
T ss_pred -------------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCc
Confidence 777777 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
+..... ..++..+.....++.+|++.|+|++..++||+ |+.++|+||+++.+|||++..
T Consensus 219 ~~~~~~-----------------~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~----s~~a~~itG~~i~vdGG~~~~ 277 (296)
T 3k31_A 219 ASSGIS-----------------DFHYILTWNKYNSPLRRNTTLDDVGGAALYLL----SDLGRGTTGETVHVDCGYHVV 277 (296)
T ss_dssp SCCSCH-----------------HHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGGC
T ss_pred hhhccc-----------------chHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CCccCCccCCEEEECCCcccc
Confidence 865421 12455566777889999999999999999999 999999999999999998754
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=326.09 Aligned_cols=247 Identities=21% Similarity=0.305 Sum_probs=215.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++++|++|++++++++++
T Consensus 4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999998888888777654 56889999999999999888765
Q ss_pred -c-CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -A-GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~-~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
+ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~-------- 151 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE---RGNVVFISSVSGAL-------- 151 (260)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS---SEEEEEECCGGGTS--------
T ss_pred HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEcchhhcc--------
Confidence 5 7999999999998778888999999999999999999999999999998865 68999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||.++|++....
T Consensus 152 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 200 (260)
T 2ae2_A 152 --------------AVPYEA-----------------VYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMT 200 (260)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHH
T ss_pred --------------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhh
Confidence 666666 9999999999999999999999999999999999999976543
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.... ...+....+....+.+|++.|+|++..+.||+ ++.++++||+.+.+|||++
T Consensus 201 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~----s~~~~~~tG~~~~vdgG~~ 255 (260)
T 2ae2_A 201 IQDP--------------EQKENLNKLIDRCALRRMGEPKELAAMVAFLC----FPAASYVTGQIIYVDGGLM 255 (260)
T ss_dssp TTSH--------------HHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred ccCh--------------hhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CccccCCCCCEEEECCCcc
Confidence 1100 00111124556678899999999999999999 9999999999999999975
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=335.34 Aligned_cols=241 Identities=24% Similarity=0.279 Sum_probs=210.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||++|||||++|||+++|++|+++|++|++++|+.+...+...+.....+.++.++++|++|++++++++++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999887544444443334467899999999999998888765
Q ss_pred cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||...+ ..+.+.+.++|++++++|+.|+++++++++|+|++ .++||++||..+..
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~--------- 188 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-----GDVIINTASIVAYE--------- 188 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-----TCEEEEECCTHHHH---------
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-----CCEEEEEechHhcC---------
Confidence 5899999999998754 57888999999999999999999999999999865 47999999999887
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.....
T Consensus 189 -------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~ 238 (291)
T 3ijr_A 189 -------------GNETLI-----------------DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF 238 (291)
T ss_dssp -------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS
T ss_pred -------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC
Confidence 667777 99999999999999999999999999999999999999865431
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++..+.+...++.+|++.|+|++..++||+ ++.++|+||+++.+|||++
T Consensus 239 -----------------~-~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~----s~~~~~itG~~i~vdGG~~ 288 (291)
T 3ijr_A 239 -----------------D-EKKVSQFGSNVPMQRPGQPYELAPAYVYLA----SSDSSYVTGQMIHVNGGVI 288 (291)
T ss_dssp -----------------C-HHHHHHTTTTSTTSSCBCGGGTHHHHHHHH----SGGGTTCCSCEEEESSSCC
T ss_pred -----------------C-HHHHHHHHccCCCCCCcCHHHHHHHHHHHh----CCccCCCcCCEEEECCCcc
Confidence 1 333445667789999999999999999999 9999999999999999964
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=331.99 Aligned_cols=241 Identities=25% Similarity=0.255 Sum_probs=194.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.++++|++|++++++++++
T Consensus 2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999998887776665 45788999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCcc----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEEecCCcccccc
Q 017757 109 -AGPVDVLVVNQGVFVPGELE----VQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN---GGPASIALMSSQAGQCWT 180 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~---~~~g~iv~vsS~~~~~~~ 180 (366)
++++|++|||||+.....+. +.+.++|++++++|+.|+++++++++|+|+++.. +..++||++||..+..
T Consensus 78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-- 155 (257)
T 3tpc_A 78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-- 155 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH--
T ss_pred HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc--
Confidence 58999999999988665543 6789999999999999999999999999988521 1368999999999887
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|
T Consensus 156 --------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t 198 (257)
T 3tpc_A 156 --------------------GQIGQA-----------------AYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDT 198 (257)
T ss_dssp --------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSC
T ss_pred --------------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCC
Confidence 777777 9999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhC-CCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKS-GSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~-gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
++..... ++..+.+...++. +|++.|+|++..+.||+ ++ .|+|||++.+|||++
T Consensus 199 ~~~~~~~-------------------~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~----s~--~~itG~~i~vdGG~~ 253 (257)
T 3tpc_A 199 PMMAGMP-------------------QDVQDALAASVPFPPRLGRAEEYAALVKHIC----EN--TMLNGEVIRLDGALR 253 (257)
T ss_dssp C---------------------------------CCSSSSCSCBCHHHHHHHHHHHH----HC--TTCCSCEEEESTTCC
T ss_pred hhhccCC-------------------HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc----cc--CCcCCcEEEECCCcc
Confidence 9875431 2334455667777 99999999999999999 65 799999999999976
Q ss_pred H
Q 017757 340 R 340 (366)
Q Consensus 340 ~ 340 (366)
.
T Consensus 254 ~ 254 (257)
T 3tpc_A 254 M 254 (257)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-44 Score=328.40 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=207.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+++|++|||||++|||+++|++|+++|++|++++|+.++ ++++.+++....+.++.++.+|++|++++++++++ +
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999999999887 78877777654466789999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~----------- 147 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG---FGRIINIASAHGLV----------- 147 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEEECcHHhCc-----------
Confidence 8999999999988778888999999999999999999999999999998865 68999999998876
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++.......
T Consensus 148 -----------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~ 199 (260)
T 1x1t_A 148 -----------ASANKS-----------------AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISA 199 (260)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------
T ss_pred -----------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhh
Confidence 666666 9999999999999999999999999999999999999986542110
Q ss_pred CCcchhhhhccCCCCCHHHHHHHH-HhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKA-LDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~-~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... ....++++..+.+ ....+.+|++.|+|++..++||+ ++.++++||+++.+|||++
T Consensus 200 ~~~--------~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~----s~~~~~~tG~~~~vdgG~~ 258 (260)
T 1x1t_A 200 LAE--------KNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA----SDAAAQITGTTVSVDGGWT 258 (260)
T ss_dssp -----------------------CHHHHCTTCCCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred hcc--------ccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHh----ChhhcCCCCCEEEECCCcc
Confidence 000 0011223333333 45678899999999999999999 9999999999999999975
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=336.45 Aligned_cols=256 Identities=24% Similarity=0.338 Sum_probs=212.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC------------chhHHHHHHHHHhhcCCeEEEEEecCCCH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS------------GKKLEEAKQSIQLATGIEVATYSADVRDF 99 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~~~~Dls~~ 99 (366)
..+++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++... +.++.++++|++|+
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~ 119 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-GRRIIARQADVRDL 119 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCTTCH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCCCCH
Confidence 346899999999999999999999999999999999886 55666666666544 67899999999999
Q ss_pred HHHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 100 DAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 100 ~~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+++++++++ ++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++. .++||++||..
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--~g~Iv~isS~~ 197 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ--GGSVIFVSSTV 197 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS--CEEEEEECCGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--CCEEEEECcHH
Confidence 999888765 589999999999988888899999999999999999999999999999988642 58999999999
Q ss_pred cccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcC
Q 017757 176 GQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255 (366)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~P 255 (366)
+.. +.++.. .|++||+|+++|+++++.|++++||+||+|+|
T Consensus 198 ~~~----------------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P 238 (317)
T 3oec_A 198 GLR----------------------GAPGQS-----------------HYAASKHGVQGLMLSLANEVGRHNIRVNSVNP 238 (317)
T ss_dssp GSS----------------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred hcC----------------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHhhcCeEEEEEec
Confidence 887 777777 99999999999999999999999999999999
Q ss_pred CCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHH--hhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 256 PDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKAL--DGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 256 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
|+|+|++........ ...........++..+.+. ..++ ++++.|+|++..++||+ |++++|+|||+|.
T Consensus 239 G~v~T~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~pedvA~av~fL~----s~~a~~itG~~i~ 308 (317)
T 3oec_A 239 GAVNTEMALNEKLLK-----MFLPHLENPTREDAAELFSQLTLLP-IPWVEPEDVSNAVAWLA----SDEARYIHGAAIP 308 (317)
T ss_dssp CSBSSHHHHCHHHHH-----HHCTTCSSCCHHHHHHHHTTTCSSS-SSSBCHHHHHHHHHHHT----SGGGTTCCSCEEE
T ss_pred CcccCccccchhhhh-----hhhhhccccchhHHHHHHhhhccCC-CCCCCHHHHHHHHHHHc----CCcccCCCCCEEE
Confidence 999999865321100 0000001122333333221 2233 78899999999999999 9999999999999
Q ss_pred HHHHHH
Q 017757 334 VAAGLI 339 (366)
Q Consensus 334 ~dgG~~ 339 (366)
+|||++
T Consensus 309 vdGG~~ 314 (317)
T 3oec_A 309 VDGGQL 314 (317)
T ss_dssp ESTTGG
T ss_pred ECcchh
Confidence 999975
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=323.74 Aligned_cols=242 Identities=24% Similarity=0.314 Sum_probs=180.0
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
|..+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++.+|++|++++++++++
T Consensus 2 p~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 2 PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999999999988888754 66899999999999999988775
Q ss_pred ---cCCCcEEEEcCCCC---CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 ---AGPVDVLVVNQGVF---VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 ---~~~id~vi~nAG~~---~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++|||||+. ....+.+.+.++|++++++|+.++++++++++|.|++++ .++||++||..+..
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~---- 153 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG---GGAIVNQSSTAAWL---- 153 (253)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CEEEEEECC---------
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC---CCEEEEECCccccC----
Confidence 58999999999984 345677889999999999999999999999999999876 68999999987642
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
... .|++||+|+++|+++++.|++++||+||+|+||+++|++
T Consensus 154 ---------------------~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 195 (253)
T 3qiv_A 154 ---------------------YSN-----------------YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEA 195 (253)
T ss_dssp --------------------------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------
T ss_pred ---------------------CCc-----------------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccc
Confidence 233 799999999999999999999999999999999999997
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+.. .+++..+.+.+..+.++++.|+|++..+.||+ ++.+.++||+++.+|||.+
T Consensus 196 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~~tG~~~~vdgG~~ 250 (253)
T 3qiv_A 196 NRTT------------------TPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLL----SDEASWITGQIFNVDGGQI 250 (253)
T ss_dssp ------------------------------------------CCHHHHHHHHHH----SGGGTTCCSCEEEC-----
T ss_pred hhhc------------------CcHHHHHHHhccCCCCCCCCHHHHHHHHHHHc----CccccCCCCCEEEECCCee
Confidence 6542 23556667778889999999999999999999 9999999999999999976
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=330.88 Aligned_cols=243 Identities=14% Similarity=0.091 Sum_probs=207.9
Q ss_pred CcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 32 RIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
..+++||++|||||+ +|||+++|++|+++|++|++++|+.... +..+++....+ ++.++++|++|++++++++++
T Consensus 26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRVEPLAEELG-AFVAGHCDVADAASIDAVFETL 103 (293)
T ss_dssp -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHH
Confidence 446899999999999 5599999999999999999999996443 33444443333 688999999999999988775
Q ss_pred ---cCCCcEEEEcCCCCC----CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 109 ---AGPVDVLVVNQGVFV----PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-----~g~Iv~isS~~~~~--- 175 (293)
T 3grk_A 104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-----GGSILTLTYYGAEK--- 175 (293)
T ss_dssp HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-----CEEEEEEECGGGTS---
T ss_pred HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CCEEEEEeehhhcc---
Confidence 589999999999876 567888999999999999999999999999999976 58999999999877
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus 176 -------------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 219 (293)
T 3grk_A 176 -------------------VMPNYN-----------------VMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTL 219 (293)
T ss_dssp -------------------BCTTTT-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-
T ss_pred -------------------CCCchH-----------------HHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcch
Confidence 666777 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
+..... ..++..+.+...++.+|++.|+|++..++||+ ++.++|+||+++.+|||++..
T Consensus 220 ~~~~~~-----------------~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~~~~~itG~~i~vdGG~~~~ 278 (293)
T 3grk_A 220 AASGIG-----------------DFRYILKWNEYNAPLRRTVTIDEVGDVGLYFL----SDLSRSVTGEVHHADSGYHVI 278 (293)
T ss_dssp -----C-----------------CHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGGB
T ss_pred hhhccc-----------------chHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CccccCCcceEEEECCCcccC
Confidence 865421 23556667778899999999999999999999 999999999999999998743
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=332.37 Aligned_cols=239 Identities=23% Similarity=0.255 Sum_probs=197.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
++++||++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++... +.++.++++|++|++++++++++
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-GRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-TSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998 66677777777777654 66789999999999999888765
Q ss_pred -cCCCcEEEEcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc-cccccccC
Q 017757 109 -AGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ-CWTIKNTN 185 (366)
Q Consensus 109 -~~~id~vi~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~-~~~~~~~~ 185 (366)
++++|++|||||.. ...++.+.+.++|++++++|+.|+++++++++|+|++ .++||++||..+. .
T Consensus 83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------- 150 (259)
T 3edm_A 83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-----GGAIVTFSSQAGRDG------- 150 (259)
T ss_dssp HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEECCHHHHHC-------
T ss_pred HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCEEEEEcCHHhccC-------
Confidence 58999999999987 5678889999999999999999999999999999976 4799999999887 4
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+++|+++++.|+++. ||||+|+||+|+|++.+.
T Consensus 151 ---------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~ 197 (259)
T 3edm_A 151 ---------------GGPGAL-----------------AYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDT 197 (259)
T ss_dssp ---------------CSTTCH-----------------HHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----
T ss_pred ---------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccc
Confidence 556666 99999999999999999999987 999999999999998765
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. .++..+.+....+.+|++.|+|++..++||+ ++.++|+||+++.+|||++
T Consensus 198 ~~------------------~~~~~~~~~~~~p~~r~~~pedva~~v~~L~----s~~~~~itG~~i~vdGg~~ 249 (259)
T 3edm_A 198 FT------------------KPEVRERVAGATSLKREGSSEDVAGLVAFLA----SDDAAYVTGACYDINGGVL 249 (259)
T ss_dssp -----------------------------------CCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESBCSS
T ss_pred cc------------------ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCccCCEEEECCCcC
Confidence 32 1334455666788999999999999999999 9999999999999999965
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=330.22 Aligned_cols=248 Identities=23% Similarity=0.286 Sum_probs=211.0
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
++++..+++||++|||||++|||+++|++|+++|++|++++|+.+.. ...+..+++|++|+++++++++
T Consensus 5 ~~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~ 73 (269)
T 3vtz_A 5 HHHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------VNVSDHFKIDVTNEEEVKEAVE 73 (269)
T ss_dssp -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------TTSSEEEECCTTCHHHHHHHHH
T ss_pred ccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------cCceeEEEecCCCHHHHHHHHH
Confidence 45667889999999999999999999999999999999999987643 1256788999999999988876
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
+ ++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 74 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~----- 145 (269)
T 3vtz_A 74 KTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG---HGSIINIASVQSYA----- 145 (269)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS-----
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CCEEEEECchhhcc-----
Confidence 5 58999999999998888889999999999999999999999999999999876 68999999999887
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+++|+++++.|+++ ||+||+|+||+|+|++.
T Consensus 146 -----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~ 190 (269)
T 3vtz_A 146 -----------------ATKNAA-----------------AYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMV 190 (269)
T ss_dssp -----------------BCTTCH-----------------HHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHH
T ss_pred -----------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcch
Confidence 666677 9999999999999999999998 89999999999999987
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
......... ......++..+.+....+.+|++.|+|++..++||+ ++.++++||+++.+|||++..
T Consensus 191 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~~~~~itG~~i~vdGG~~~~ 256 (269)
T 3vtz_A 191 IKAAKMEVG--------EDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLA----SDRSSFITGACLTVDGGLLSK 256 (269)
T ss_dssp HHHHHHHHC--------CSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGGB
T ss_pred hhhhhcccc--------ccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CCccCCCcCcEEEECCCcccc
Confidence 654221000 001122556667778889999999999999999999 999999999999999998743
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=329.30 Aligned_cols=252 Identities=28% Similarity=0.403 Sum_probs=202.9
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC------------chhHHHHHHHHHhhcCCeEEEEEecC
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS------------GKKLEEAKQSIQLATGIEVATYSADV 96 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~~~~Dl 96 (366)
+....+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++... +.++.++++|+
T Consensus 5 ~~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~ 83 (278)
T 3sx2_A 5 RSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-GSRIVARQADV 83 (278)
T ss_dssp ----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-TCCEEEEECCT
T ss_pred CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-CCeEEEEeCCC
Confidence 445678999999999999999999999999999999999987 56666666666554 67899999999
Q ss_pred CCHHHHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEec
Q 017757 97 RDFDAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMS 172 (366)
Q Consensus 97 s~~~~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vs 172 (366)
+|++++++++++ ++++|+||||||+..... +.++|++++++|+.++++++++++|+|++++. .++||++|
T Consensus 84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~g~iv~is 157 (278)
T 3sx2_A 84 RDRESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT--GGSIVLIS 157 (278)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS--CEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CcEEEEEc
Confidence 999999888765 589999999999875543 68999999999999999999999999988642 58999999
Q ss_pred CCccccccccccCccCccccccccccCCCC----CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCc
Q 017757 173 SQAGQCWTIKNTNMKGINENKLCESSGKGH----GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDI 248 (366)
Q Consensus 173 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI 248 (366)
|.++.. +. ++.. .|++||+|+++|+++++.|++++||
T Consensus 158 S~~~~~----------------------~~~~~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi 198 (278)
T 3sx2_A 158 SSAGLA----------------------GVGSADPGSV-----------------GYVAAKHGVVGLMRVYANLLAGQMI 198 (278)
T ss_dssp CGGGTS----------------------CCCCSSHHHH-----------------HHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred cHHhcC----------------------CCccCCCCch-----------------HhHHHHHHHHHHHHHHHHHHhccCc
Confidence 998875 33 3444 8999999999999999999999999
Q ss_pred EEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHH
Q 017757 249 HVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLM 328 (366)
Q Consensus 249 ~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~it 328 (366)
+||+|+||+|+|++........ ....... ..+....+...++ +++..|+|++..++||+ ++.++|+|
T Consensus 199 ~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~----s~~~~~it 265 (278)
T 3sx2_A 199 RVNSIHPSGVETPMINNEFTRE-WLAKMAA-------ATDTPGAMGNAMP-VEVLAPEDVANAVAWLV----SDQARYIT 265 (278)
T ss_dssp EEEEEEESCBSSTTTSSHHHHH-HHHHHHH-------HCC--CTTSCSSS-CSSBCHHHHHHHHHHHT----SGGGTTCC
T ss_pred EEEEEecCCccCccchhhhHHH-HHhhccc-------hhhhhhhhhhhcC-cCcCCHHHHHHHHHHHh----Cccccccc
Confidence 9999999999999876421100 0000000 0000001123345 78999999999999999 99999999
Q ss_pred HHHHHHHHHHH
Q 017757 329 AFVEVVAAGLI 339 (366)
Q Consensus 329 G~~i~~dgG~~ 339 (366)
|+++.+|||++
T Consensus 266 G~~i~vdGG~~ 276 (278)
T 3sx2_A 266 GVTLPVDAGFL 276 (278)
T ss_dssp SCEEEESTTTT
T ss_pred CCEEeECCCcc
Confidence 99999999975
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=323.78 Aligned_cols=254 Identities=23% Similarity=0.294 Sum_probs=218.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
++++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++....+.++.++++|++|++++++++++
T Consensus 2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999998888888777655466789999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||..+..
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--------- 149 (263)
T 3ai3_A 82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG---GGAIIHNASICAVQ--------- 149 (263)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEECchhhcC---------
Confidence 58999999999998778888999999999999999999999999999998765 68999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.....
T Consensus 150 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~ 199 (263)
T 3ai3_A 150 -------------PLWYEP-----------------IYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTA 199 (263)
T ss_dssp -------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHH
T ss_pred -------------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhh
Confidence 666666 89999999999999999999999999999999999999865432
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhh-hhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDG-IKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... ....+.++..+.+... .+.++++.|+|++..+.||+ ++.++++||+.+.+|||++
T Consensus 200 ~~~~~--------~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~----s~~~~~~~G~~~~vdgG~~ 260 (263)
T 3ai3_A 200 KELTK--------DNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC----SERATYSVGSAYFVDGGML 260 (263)
T ss_dssp HHHTT--------TTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHT----STTCTTCCSCEEEESTTCC
T ss_pred Hhhhc--------ccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc----CccccCCCCcEEEECCCcc
Confidence 10000 0011234444445555 78899999999999999999 9999999999999999964
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=326.00 Aligned_cols=246 Identities=23% Similarity=0.304 Sum_probs=214.5
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~ 106 (366)
+++...+.++|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++... +.++.++.+|++|.+++++++
T Consensus 4 ~~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~ 82 (256)
T 3ezl_A 4 HHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-GFDFYASEGNVGDWDSTKQAF 82 (256)
T ss_dssp ---------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeeEEEecCCCCHHHHHHHH
Confidence 45667788999999999999999999999999999999988 7777777777777654 668899999999999998887
Q ss_pred Hh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 107 DE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 107 ~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++ ++++|++|||||+.....+.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 83 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~---- 155 (256)
T 3ezl_A 83 DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG---WGRIINISSVNGQK---- 155 (256)
T ss_dssp HHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCCCGGG----
T ss_pred HHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCEEEEEcchhhcc----
Confidence 65 58999999999998888889999999999999999999999999999999876 68999999999887
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++
T Consensus 156 ------------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 200 (256)
T 3ezl_A 156 ------------------GQFGQT-----------------NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 200 (256)
T ss_dssp ------------------SCSCCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred ------------------CCCCCc-----------------ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcc
Confidence 777777 999999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+.. .++..+.+....+.++++.|+|++..+.||+ +++++++||+++.+|||++
T Consensus 201 ~~~~-------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~~tG~~i~vdgG~~ 254 (256)
T 3ezl_A 201 VKAI-------------------RPDVLEKIVATIPVRRLGSPDEIGSIVAWLA----SEESGFSTGADFSLNGGLH 254 (256)
T ss_dssp HHTS-------------------CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSC
T ss_pred cccc-------------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CCcccCCcCcEEEECCCEe
Confidence 6542 1345566777889999999999999999999 9999999999999999975
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=330.15 Aligned_cols=244 Identities=23% Similarity=0.245 Sum_probs=209.6
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
...++++||++|||||++|||+++|++|+++|++|++++|+ .+..++..+++... +.++.++++|++|++++++++++
T Consensus 22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~ 100 (271)
T 4iin_A 22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-GYKAAVIKFDAASESDFIEAIQT 100 (271)
T ss_dssp --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHH
T ss_pred hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHH
Confidence 34678999999999999999999999999999999999995 44455555555543 67899999999999999888875
Q ss_pred ----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|++|||||+.....+.+.+.+++++++++|+.+++++++.++|+|++++ .++||++||..+..
T Consensus 101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~------ 171 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR---FGSVVNVASIIGER------ 171 (271)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHH------
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC---CCEEEEEechhhcC------
Confidence 48999999999998888888999999999999999999999999999999876 68999999999877
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+|+|++.+
T Consensus 172 ----------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 218 (271)
T 4iin_A 172 ----------------GNMGQT-----------------NYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA 218 (271)
T ss_dssp ----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---
T ss_pred ----------------CCCCch-----------------HhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh
Confidence 777777 99999999999999999999999999999999999999876
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... ++..+.+...++.+|+..|+|++..+.||+ ++.+.++||+++.+|||+.
T Consensus 219 ~~~-------------------~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~----s~~~~~itG~~i~vdGG~~ 270 (271)
T 4iin_A 219 NLK-------------------DELKADYVKNIPLNRLGSAKEVAEAVAFLL----SDHSSYITGETLKVNGGLY 270 (271)
T ss_dssp ----------------------------CGGGCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSC
T ss_pred hhc-------------------HHHHHHHHhcCCcCCCcCHHHHHHHHHHHh----CCCcCCCcCCEEEeCCCee
Confidence 532 223344566778999999999999999999 9999999999999999974
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=326.15 Aligned_cols=241 Identities=22% Similarity=0.278 Sum_probs=216.4
Q ss_pred cCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhH-HHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 33 IPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKL-EEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~-~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
++++||++|||||+ +|||+++|++|+++|++|++++|+.... ++..+++....+.++.++++|++|++++++++++
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 57899999999999 9999999999999999999999987665 6777777766688999999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~------- 165 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG---TGSLVITASMSGHI------- 165 (267)
T ss_dssp HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCGGGTS-------
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC---CceEEEEccccccc-------
Confidence 58999999999998888889999999999999999999999999999999876 68999999988865
Q ss_pred ccCccccccccccCCCC--CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 186 MKGINENKLCESSGKGH--GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+. ++.. .|++||+|+++|+++++.|+++. |+||+|+||+++|++.
T Consensus 166 ---------------~~~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~ 212 (267)
T 3gdg_A 166 ---------------ANFPQEQT-----------------SYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLS 212 (267)
T ss_dssp ---------------CCSSSCCH-----------------HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCG
T ss_pred ---------------cCCCCCCC-----------------cchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchh
Confidence 32 3455 89999999999999999999987 9999999999999987
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+.. +++..+.+....+.+|++.|+|++..++||+ ++.+.++||+++.+|||++
T Consensus 213 ~~~-------------------~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~----s~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 213 DFV-------------------PKETQQLWHSMIPMGRDGLAKELKGAYVYFA----SDASTYTTGADLLIDGGYT 265 (267)
T ss_dssp GGS-------------------CHHHHHHHHTTSTTSSCEETHHHHHHHHHHH----STTCTTCCSCEEEESTTGG
T ss_pred hhC-------------------CHHHHHHHHhcCCCCCCcCHHHHHhHhheee----cCccccccCCEEEECCcee
Confidence 542 2455567778889999999999999999999 9999999999999999986
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=324.88 Aligned_cols=240 Identities=26% Similarity=0.332 Sum_probs=211.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++||+++||||++|||+++|++|+++|++|++++| +.++++++.+++... +.++.++++|++|++++++++++
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-GSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999 888888877777654 56788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||.++..
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 146 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR---HGRIVNIASVVGVT---------- 146 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCTHHHH----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEECCHHhcC----------
Confidence 58999999999998777888999999999999999999999999999998865 68999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+++++++.|++++||+||+|+||+++|++.....
T Consensus 147 ------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~- 196 (246)
T 2uvd_A 147 ------------GNPGQA-----------------NYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD- 196 (246)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC-
T ss_pred ------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC-
Confidence 666666 99999999999999999999999999999999999999754310
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
++..+.+....+.++++.|+|++..+.||+ ++.++|+||+.+.+|||++
T Consensus 197 ------------------~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~----s~~~~~~tG~~~~vdgG~~ 245 (246)
T 2uvd_A 197 ------------------ENIKAEMLKLIPAAQFGEAQDIANAVTFFA----SDQSKYITGQTLNVDGGMV 245 (246)
T ss_dssp ------------------TTHHHHHHHTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSC
T ss_pred ------------------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCCCCCEEEECcCcc
Confidence 112233445678899999999999999999 9999999999999999964
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=328.26 Aligned_cols=238 Identities=22% Similarity=0.325 Sum_probs=208.1
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-------hHHHHHHHHHhhcCCeEEEEEecCCCHHHH
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-------KLEEAKQSIQLATGIEVATYSADVRDFDAV 102 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-------~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v 102 (366)
|+.|++++|++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++... +.++.++++|++|++++
T Consensus 2 p~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v 80 (285)
T 3sc4_A 2 PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GGQALPIVGDIRDGDAV 80 (285)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-TSEEEEEECCTTSHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-CCcEEEEECCCCCHHHH
Confidence 4568899999999999999999999999999999999999986 466677777654 67899999999999999
Q ss_pred HHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 103 KTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 103 ~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
++++++ ++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 81 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~~~~ 157 (285)
T 3sc4_A 81 AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD---NPHILTLSPPIRLE 157 (285)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS---SCEEEECCCCCCCS
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEECChhhcc
Confidence 888765 58999999999998888899999999999999999999999999999998866 68999999998865
Q ss_pred ccccccCccCccccccccccCCCC-CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC-
Q 017757 179 WTIKNTNMKGINENKLCESSGKGH-GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP- 256 (366)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG- 256 (366)
+. ++.. .|++||+|+++|+++++.|++++||+||+|+||
T Consensus 158 ----------------------~~~~~~~-----------------~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~ 198 (285)
T 3sc4_A 158 ----------------------PKWLRPT-----------------PYMMAKYGMTLCALGIAEELRDAGIASNTLWPRT 198 (285)
T ss_dssp ----------------------GGGSCSH-----------------HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSS
T ss_pred ----------------------CCCCCCc-----------------hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCC
Confidence 33 4445 899999999999999999999999999999999
Q ss_pred CCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHH
Q 017757 257 DTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAA 336 (366)
Q Consensus 257 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dg 336 (366)
.++|++.+..... ..+.+|++.|+|++..++||+ ++.+ ++||+.+.+||
T Consensus 199 ~v~t~~~~~~~~~--------------------------~~~~~r~~~pedvA~~~~~l~----s~~~-~~tG~~i~~dg 247 (285)
T 3sc4_A 199 TVATAAVQNLLGG--------------------------DEAMARSRKPEVYADAAYVVL----NKPS-SYTGNTLLCED 247 (285)
T ss_dssp CBCCHHHHHHHTS--------------------------CCCCTTCBCTHHHHHHHHHHH----TSCT-TCCSCEEEHHH
T ss_pred ccccHHHHhhccc--------------------------cccccCCCCHHHHHHHHHHHh----CCcc-cccceEEEEcC
Confidence 7899876653221 124678999999999999999 9988 99999999999
Q ss_pred HHHHH
Q 017757 337 GLIRF 341 (366)
Q Consensus 337 G~~~~ 341 (366)
|+...
T Consensus 248 g~~~~ 252 (285)
T 3sc4_A 248 VLLES 252 (285)
T ss_dssp HHHHH
T ss_pred chhcc
Confidence 98865
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=329.60 Aligned_cols=238 Identities=21% Similarity=0.309 Sum_probs=210.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||++|||||++|||+++|++|+++|++|++++|+.+.++ ....+.+|++|.+++++++++
T Consensus 23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~------------~~~~~~~Dv~~~~~~~~~~~~~~~ 90 (266)
T 3uxy_A 23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------------ADLHLPGDLREAAYADGLPGAVAA 90 (266)
T ss_dssp ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC------------CSEECCCCTTSHHHHHHHHHHHHH
T ss_pred hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------------hhhccCcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999876532 124458999999998887765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.++..
T Consensus 91 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~~~~--------- 158 (266)
T 3uxy_A 91 GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG---GGAIVNVASCWGLR--------- 158 (266)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCSBTTB---------
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEECCHHhCC---------
Confidence 58999999999998888889999999999999999999999999999999876 68999999999887
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus 159 -------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 208 (266)
T 3uxy_A 159 -------------PGPGHA-----------------LYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGF 208 (266)
T ss_dssp -------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHH
T ss_pred -------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhh
Confidence 777777 99999999999999999999999999999999999999876543
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... ...+++..+.+...++.+|++.|+|++..++||+ ++.++|+||+++.+|||++
T Consensus 209 ~~~------------~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~----s~~~~~itG~~i~vdGG~~ 264 (266)
T 3uxy_A 209 AKR------------GFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA----SDAARYLCGSLVEVNGGKA 264 (266)
T ss_dssp HHT------------TCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTCC
T ss_pred hcc------------cccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCcCCEEEECcCEe
Confidence 221 2356777788888999999999999999999999 9999999999999999964
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=320.96 Aligned_cols=235 Identities=30% Similarity=0.338 Sum_probs=206.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++ + +.++.+|++|++++++++++
T Consensus 1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~D~~~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----G--AHPVVMDVADPASVERGFAEALAH 74 (245)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----T--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CEEEEecCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999988777665443 2 67889999999999887765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||.. ..
T Consensus 75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~-~~---------- 140 (245)
T 1uls_A 75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN---PGSIVLTASRV-YL---------- 140 (245)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CEEEEEECCGG-GG----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CCEEEEEccch-hc----------
Confidence 58999999999998878888999999999999999999999999999998765 68999999988 55
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+++++++.|++++||+||+|+||+++|++....
T Consensus 141 ------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-- 189 (245)
T 1uls_A 141 ------------GNLGQA-----------------NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-- 189 (245)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--
T ss_pred ------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc--
Confidence 556666 9999999999999999999999999999999999999975421
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++..+.+...++.+|++.|+|++..++||+ ++.++++||+.+.+|||++
T Consensus 190 ----------------~-~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~----s~~~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 190 ----------------P-EKVREKAIAATPLGRAGKPLEVAYAALFLL----SDESSFITGQVLFVDGGRT 239 (245)
T ss_dssp ----------------C-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred ----------------C-HHHHHHHHhhCCCCCCcCHHHHHHHHHHHh----CchhcCCcCCEEEECCCcc
Confidence 1 223344556678899999999999999999 9999999999999999975
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=323.76 Aligned_cols=249 Identities=24% Similarity=0.297 Sum_probs=212.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh--HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK--LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~--~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++|++|||||++|||+++|++|+++|++|++++|+.++ +++..+++... +.++.++++|++|++++++++++ +
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 37999999999999999999999999999999999887 77777777643 56789999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-cEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGP-ASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ . ++||++||..+..
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~---------- 146 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG---VKGKIINAASIAAIQ---------- 146 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCCEEEEECCGGGTS----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC---CCcEEEEECcchhcc----------
Confidence 8999999999998778888999999999999999999999999999998865 4 8999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++......
T Consensus 147 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~ 197 (258)
T 3a28_C 147 ------------GFPILS-----------------AYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDA 197 (258)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHH
T ss_pred ------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhh
Confidence 666667 999999999999999999999999999999999999998654211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ... . . ...++..+.+...++.+|++.|+|++..+.||+ ++.++|+||+.+.+|||++
T Consensus 198 ~~---~~~---~-~-~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~----s~~~~~~tG~~i~vdGG~~ 256 (258)
T 3a28_C 198 EL---SKI---N-G-KPIGENFKEYSSSIALGRPSVPEDVAGLVSFLA----SENSNYVTGQVMLVDGGML 256 (258)
T ss_dssp HH---HHH---H-C-CCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESSSSC
T ss_pred hh---ccc---c-C-CchHHHHHHHHhcCCCCCccCHHHHHHHHHHHh----CcccCCCCCCEEEECCCEe
Confidence 00 000 0 0 000233345556678899999999999999999 9999999999999999964
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=322.24 Aligned_cols=243 Identities=22% Similarity=0.296 Sum_probs=200.8
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
++....++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++. .++.+..+|+++.++++++++
T Consensus 5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~ 80 (249)
T 3f9i_A 5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLIS 80 (249)
T ss_dssp ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHH
T ss_pred CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHH
Confidence 4556678899999999999999999999999999999999999988887776653 478899999999999999999
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
+.+++|++|||||......+.+.+.++|++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~--------- 148 (249)
T 3f9i_A 81 KTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR---YGRIINISSIVGIA--------- 148 (249)
T ss_dssp TCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCCCC-----------
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CcEEEEEccHHhcc---------
Confidence 999999999999998887788889999999999999999999999999998876 68999999999887
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+|+|++.+..
T Consensus 149 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~- 197 (249)
T 3f9i_A 149 -------------GNPGQA-----------------NYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL- 197 (249)
T ss_dssp -------------CCSCSH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C-
T ss_pred -------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc-
Confidence 667777 9999999999999999999999999999999999999986542
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++..+.+....+.+++..++|++..+.||+ ++.+.++||+++.+|||++
T Consensus 198 ------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 198 ------------------NEKQREAIVQKIPLGTYGIPEDVAYAVAFLA----SNNASYITGQTLHVNGGML 247 (249)
T ss_dssp ------------------CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSS
T ss_pred ------------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CCccCCccCcEEEECCCEe
Confidence 1344556677889999999999999999999 9999999999999999975
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=334.22 Aligned_cols=242 Identities=23% Similarity=0.248 Sum_probs=207.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.++++||++|||||++|||+++|++|+++|++|++++|+. +..+++.+.+.. .+.++.++++|++|++++++++++
T Consensus 44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-CGRKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-TTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999973 344555555543 367899999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ---AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|++|||||... ...+.+.+.++|++++++|+.|+++++++++|+|++ .++||++||..+..
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----~g~Iv~isS~~~~~------ 191 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-----GASIITTSSIQAYQ------ 191 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-----TCEEEEECCGGGTS------
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-----CCEEEEECChhhcc------
Confidence 589999999999865 467889999999999999999999999999999865 47999999999887
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus 192 ----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~ 238 (294)
T 3r3s_A 192 ----------------PSPHLL-----------------DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQI 238 (294)
T ss_dssp ----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHH
T ss_pred ----------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccc
Confidence 777777 99999999999999999999999999999999999998743
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... ++..+.+....+.+|++.|+|++..++||+ |++++|+||+++.+|||++
T Consensus 239 ~~~~~-----------------~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~----s~~~~~itG~~i~vdGG~~ 292 (294)
T 3r3s_A 239 SGGQT-----------------QDKIPQFGQQTPMKRAGQPAELAPVYVYLA----SQESSYVTAEVHGVCGGEH 292 (294)
T ss_dssp TTTSC-----------------GGGSTTTTTTSTTSSCBCGGGGHHHHHHHH----SGGGTTCCSCEEEESTTCC
T ss_pred ccCCC-----------------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCCCCEEEECCCcc
Confidence 21110 111223345678899999999999999999 9999999999999999964
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=321.53 Aligned_cols=241 Identities=22% Similarity=0.295 Sum_probs=210.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++++|++|||||++|||++++++|+++|++|++++|+.++++++. ++ .++.++.+|++|+++++++.++++++|
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id 76 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-----PGIQTRVLDVTKKKQIDQFANEVERLD 76 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-----TTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-----cCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 578999999999999999999999999999999999987655433 22 268889999999999999999999999
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||.++..
T Consensus 77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--------------- 138 (246)
T 2ag5_A 77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK---SGNIINMSSVASSV--------------- 138 (246)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCSBTTT---------------
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CceEEEEechHhCc---------------
Confidence 999999998878888899999999999999999999999999998875 68999999998865
Q ss_pred cccccCCCCC-CccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 194 LCESSGKGHG-GYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 194 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.+ +.. .|++||+|+++++++++.|++++||+||+|+||+++|++.......
T Consensus 139 -------~~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--- 191 (246)
T 2ag5_A 139 -------KGVVNRC-----------------VYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQA--- 191 (246)
T ss_dssp -------BCCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHH---
T ss_pred -------CCCCCCc-----------------cHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhc---
Confidence 444 555 8999999999999999999999999999999999999976542111
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...+++..+.+....+.++++.|+|++..+.||+ ++.+.++||+++.+|||++
T Consensus 192 ----------~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~----s~~~~~~tG~~i~vdgG~~ 244 (246)
T 2ag5_A 192 ----------RGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA----SDESAYVTGNPVIIDGGWS 244 (246)
T ss_dssp ----------SSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHH----SGGGTTCCSCEEEECTTGG
T ss_pred ----------ccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CccccCCCCCEEEECCCcc
Confidence 0123444555666778899999999999999999 9999999999999999975
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=324.99 Aligned_cols=253 Identities=21% Similarity=0.271 Sum_probs=209.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++.++.+|++|++++++++++
T Consensus 2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 2 DLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR 81 (260)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999988888887776432 33788999999999999888875
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++ +|+||||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 82 ~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~-------- 149 (260)
T 2z1n_A 82 DLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG---WGRMVYIGSVTLLR-------- 149 (260)
T ss_dssp HTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS--------
T ss_pred HhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEECchhhcC--------
Confidence 46 99999999988777888999999999999999999999999999998875 68999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+.+++++++.|++++||+||+|+||+++|++....
T Consensus 150 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 198 (260)
T 2z1n_A 150 --------------PWQDLA-----------------LSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSL 198 (260)
T ss_dssp --------------CCTTBH-----------------HHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--
T ss_pred --------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhh
Confidence 666666 9999999999999999999999999999999999999986521
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
....... ....++...+.+....+.+|++.|+|++..+.||+ ++.++++||+++.+|||++
T Consensus 199 ~~~~~~~--------~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~----s~~~~~~tG~~i~vdGG~~ 259 (260)
T 2z1n_A 199 AEERARR--------SGITVEEALKSMASRIPMGRVGKPEELASVVAFLA----SEKASFITGAVIPVDGGAH 259 (260)
T ss_dssp -----------------------------CCTTSSCCCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTTT
T ss_pred hhhhhcc--------cCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHh----CccccCCCCCEEEeCCCcc
Confidence 1100000 00011111233455678899999999999999999 9999999999999999964
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=323.69 Aligned_cols=245 Identities=14% Similarity=0.130 Sum_probs=214.5
Q ss_pred CCcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 31 VRIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
++++++||++|||||+ +|||+++|++|+++|++|++++|+....+...+......+.++.++++|++|++++++++++
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence 3578999999999999 67999999999999999999999976555544444433334799999999999999988876
Q ss_pred ----cCCCcEEEEcCCCCC----CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 109 ----AGPVDVLVVNQGVFV----PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
++++|++|||||... ...+.+.+.+++++++++|+.++++++++++|+|++ .++||++||.++..
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~g~iv~isS~~~~~-- 153 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-----GGSIVTLTYLGGEL-- 153 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-----CEEEEEEECGGGTS--
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-----CceEEEEecccccc--
Confidence 589999999999876 467788999999999999999999999999999975 58999999999887
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|
T Consensus 154 --------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T 196 (266)
T 3oig_A 154 --------------------VMPNYN-----------------VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRT 196 (266)
T ss_dssp --------------------CCTTTH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCS
T ss_pred --------------------cCCCcc-----------------hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccc
Confidence 777777 9999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++..... ..++..+.+....+.+|+..|+|++..++||+ ++.+.++||+++.+|||++.
T Consensus 197 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~----s~~~~~~tG~~i~vdGG~~~ 255 (266)
T 3oig_A 197 LSAKGIS-----------------DFNSILKDIEERAPLRRTTTPEEVGDTAAFLF----SDMSRGITGENLHVDSGFHI 255 (266)
T ss_dssp GGGTTCT-----------------THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred ccccccc-----------------chHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CCchhcCcCCEEEECCCeEE
Confidence 8765421 23556677778889999999999999999999 99999999999999999873
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=327.95 Aligned_cols=243 Identities=18% Similarity=0.160 Sum_probs=210.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCchhHHHHHHHHHhhcCCeEEEEEecCCCHH-----------
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSADVRDFD----------- 100 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~----------- 100 (366)
+++++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++....+.++.++++|++|++
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence 468999999999999999999999999999999999 99988888888886444678999999999999
Q ss_pred ------HHHHHHHh----cCCCcEEEEcCCCCCCCCccCCC--------------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 101 ------AVKTALDE----AGPVDVLVVNQGVFVPGELEVQS--------------LDEVRLMIDVNITGSFHMIKAALPL 156 (366)
Q Consensus 101 ------~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~--------------~~~~~~~~~vN~~~~~~l~~~~~~~ 156 (366)
++++++++ ++++|+||||||+....++.+.+ .++|++++++|+.++++++++++|+
T Consensus 85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 164 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 164 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 88888765 58999999999998777788888 9999999999999999999999999
Q ss_pred HHhccC---CCCcEEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHH
Q 017757 157 IKKRQN---GGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLR 233 (366)
Q Consensus 157 l~~~~~---~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~ 233 (366)
|++++. +..++||++||..+.. +.++.. .|++||+|+.
T Consensus 165 m~~~~~~~~~~~g~Iv~isS~~~~~----------------------~~~~~~-----------------~Y~asKaa~~ 205 (291)
T 1e7w_A 165 VAGTPAKHRGTNYSIINMVDAMTNQ----------------------PLLGYT-----------------IYTMAKGALE 205 (291)
T ss_dssp HHTSCGGGSCSCEEEEEECCTTTTS----------------------CCTTCH-----------------HHHHHHHHHH
T ss_pred HHhcCCCCCCCCcEEEEEechhhcC----------------------CCCCCc-----------------hhHHHHHHHH
Confidence 987531 1147999999999876 666777 9999999999
Q ss_pred HHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCC-CeEeeCCchhHH
Q 017757 234 GLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG-SFIVPCNSEGFL 312 (366)
Q Consensus 234 ~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g-r~~~~~~v~~~~ 312 (366)
+|+++++.|++++||+||+|+||+|+|++ + . . ++..+.+...++.+ |++.|+|++..+
T Consensus 206 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~------------------~-~~~~~~~~~~~p~~~r~~~pedvA~~v 264 (291)
T 1e7w_A 206 GLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M------------------P-PAVWEGHRSKVPLYQRDSSAAEVSDVV 264 (291)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S------------------C-HHHHHHHHTTCTTTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C------------------C-HHHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999997 3 1 1 22234455667888 999999999999
Q ss_pred HHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 313 LSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 313 ~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+||+ ++.+.|+||+++.+|||++
T Consensus 265 ~~l~----s~~~~~itG~~i~vdGG~~ 287 (291)
T 1e7w_A 265 IFLC----SSKAKYITGTCVKVDGGYS 287 (291)
T ss_dssp HHHH----SGGGTTCCSCEEEESTTGG
T ss_pred HHHh----CCcccCccCcEEEECCCcc
Confidence 9999 9999999999999999975
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=323.31 Aligned_cols=236 Identities=22% Similarity=0.318 Sum_probs=201.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-------HHHHHHHHHhhcCCeEEEEEecCCCHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-------LEEAKQSIQLATGIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~ 104 (366)
+++++||++|||||++|||+++|++|+++|++|++++|+.++ +++..+++... +.++.++++|++|++++++
T Consensus 1 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 1 SLTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-GGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-TSEEEEEECCTTCHHHHHH
T ss_pred CCCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-CCeEEEEeCCCCCHHHHHH
Confidence 368899999999999999999999999999999999998764 56666666544 6789999999999999988
Q ss_pred HHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 105 ALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 105 ~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
++++ ++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~~~~-- 154 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP---NPHILTLAPPPSLN-- 154 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS---SCEEEECCCCCCCC--
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC---CceEEEECChHhcC--
Confidence 8765 58999999999998888889999999999999999999999999999998876 68999999988765
Q ss_pred ccccCccCccccccccccCCC--CCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC-C
Q 017757 181 IKNTNMKGINENKLCESSGKG--HGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP-D 257 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG-~ 257 (366)
+ .++.. .|++||+|+.+|+++++.|++++||+||+|+|| .
T Consensus 155 --------------------~~~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~ 197 (274)
T 3e03_A 155 --------------------PAWWGAHT-----------------GYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTV 197 (274)
T ss_dssp --------------------HHHHHHCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBC
T ss_pred --------------------CCCCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcc
Confidence 3 33444 899999999999999999999999999999999 7
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
++|++..... ..+.++...|+|++..++||+ ++.++++|||.+ +|||
T Consensus 198 v~T~~~~~~~----------------------------~~~~~~~~~pedvA~~v~~l~----s~~~~~itG~~i-~~~g 244 (274)
T 3e03_A 198 IATDAINMLP----------------------------GVDAAACRRPEIMADAAHAVL----TREAAGFHGQFL-IDDE 244 (274)
T ss_dssp BCC-----------------------------------CCCGGGSBCTHHHHHHHHHHH----TSCCTTCCSCEE-EHHH
T ss_pred cccchhhhcc----------------------------cccccccCCHHHHHHHHHHHh----CccccccCCeEE-EcCc
Confidence 9999763211 012335678999999999999 999999999999 8888
Q ss_pred HHHHHH
Q 017757 338 LIRFVA 343 (366)
Q Consensus 338 ~~~~~~ 343 (366)
++.-..
T Consensus 245 ~~~~~~ 250 (274)
T 3e03_A 245 VLAQAG 250 (274)
T ss_dssp HHHHTT
T ss_pred chhhcc
Confidence 886543
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=317.03 Aligned_cols=244 Identities=23% Similarity=0.292 Sum_probs=212.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++.+|++|++++++++++
T Consensus 9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999998888887777654 56788999999999998887764
Q ss_pred -cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~-------- 156 (260)
T 2zat_A 88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG---GGSVLIVSSVGAYH-------- 156 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCGGGTS--------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEEechhhcC--------
Confidence 589999999999864 46778899999999999999999999999999998765 68999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++....
T Consensus 157 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 205 (260)
T 2zat_A 157 --------------PFPNLG-----------------PYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVL 205 (260)
T ss_dssp --------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHH
T ss_pred --------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhc
Confidence 666666 9999999999999999999999999999999999999986542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. . ++..+.+....+.+|++.|+|++..+.||+ ++.++|+||+++.+|||+.
T Consensus 206 ~~----------------~-~~~~~~~~~~~~~~~~~~~~dva~~v~~l~----s~~~~~~tG~~~~vdgG~~ 257 (260)
T 2zat_A 206 WM----------------D-KARKEYMKESLRIRRLGNPEDCAGIVSFLC----SEDASYITGETVVVGGGTA 257 (260)
T ss_dssp HS----------------S-HHHHHHHHHHHTCSSCBCGGGGHHHHHHHT----SGGGTTCCSCEEEESTTCC
T ss_pred cc----------------C-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----CcccCCccCCEEEECCCcc
Confidence 11 1 222234455678899999999999999999 9999999999999999963
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=327.57 Aligned_cols=240 Identities=26% Similarity=0.323 Sum_probs=194.5
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
|..|++++|++|||||++|||+++|++|+++|++|++++|+.++. .+++ +.++.++++|++|+++++++++.
T Consensus 2 p~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~----~~~~~~~~~D~~~~~~v~~~~~~~ 74 (257)
T 3tl3_A 2 PGSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL----GDRARFAAADVTDEAAVASALDLA 74 (257)
T ss_dssp --------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc----CCceEEEECCCCCHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999965432 2222 56789999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCc----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CCCcEEEEecCCccc
Q 017757 109 --AGPVDVLVVNQGVFVPGEL----EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN-----GGPASIALMSSQAGQ 177 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~-----~~~g~iv~vsS~~~~ 177 (366)
++++|++|||||+.....+ .+.+.++|++++++|+.++++++++++|+|+++.. +..++||++||..+.
T Consensus 75 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 154 (257)
T 3tl3_A 75 ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF 154 (257)
T ss_dssp HHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred HHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence 5899999999998654322 34799999999999999999999999999987311 226899999999987
Q ss_pred cccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 178 CWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
. +.++.. .|++||+|+++|+++++.|++++||+||+|+||+
T Consensus 155 ~----------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~ 195 (257)
T 3tl3_A 155 D----------------------GQIGQA-----------------AYSASKGGVVGMTLPIARDLASHRIRVMTIAPGL 195 (257)
T ss_dssp C----------------------CHHHHH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred C----------------------CCCCCc-----------------cHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecC
Confidence 6 555666 9999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhC-CCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHH
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKS-GSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAA 336 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~-gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dg 336 (366)
|+|++.... +++..+.+...++. +|++.|+|++..++||+ ++ .++|||++.+||
T Consensus 196 v~T~~~~~~-------------------~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~----s~--~~itG~~i~vdG 250 (257)
T 3tl3_A 196 FDTPLLASL-------------------PEEARASLGKQVPHPSRLGNPDEYGALAVHII----EN--PMLNGEVIRLDG 250 (257)
T ss_dssp BCCTTC----------------------CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHH----HC--TTCCSCEEEEST
T ss_pred ccChhhhhc-------------------cHHHHHHHHhcCCCCCCccCHHHHHHHHHHHh----cC--CCCCCCEEEECC
Confidence 999987642 23445566677787 99999999999999999 65 799999999999
Q ss_pred HHHH
Q 017757 337 GLIR 340 (366)
Q Consensus 337 G~~~ 340 (366)
|+++
T Consensus 251 G~~~ 254 (257)
T 3tl3_A 251 AIRM 254 (257)
T ss_dssp TC--
T ss_pred CccC
Confidence 9874
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-43 Score=320.72 Aligned_cols=240 Identities=26% Similarity=0.312 Sum_probs=199.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..++++|++|||||++|||+++|++|+++|++|++++|+. +++++ ++.. .+.++.++++|++|++++++++++
T Consensus 2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (249)
T 2ew8_A 2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRN-LGRRVLTVKCDVSQPGDVEAFGKQVI 77 (249)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHh-cCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999998 66554 3332 256789999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~-------- 146 (249)
T 2ew8_A 78 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG---WGRIINLTSTTYWL-------- 146 (249)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGGS--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CeEEEEEcchhhcc--------
Confidence 58999999999998778888999999999999999999999999999998875 68999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh-h
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE-E 265 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~-~ 265 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.. .
T Consensus 147 --------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 195 (249)
T 2ew8_A 147 --------------KIEAYT-----------------HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS 195 (249)
T ss_dssp --------------CCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------
T ss_pred --------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhc
Confidence 666667 99999999999999999999999999999999999999865 2
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... ++..+.+. .+.+|++.|+|++..+.||+ ++.++++||+++.+|||++
T Consensus 196 ~~~~~----------------~~~~~~~~--~~~~~~~~p~dva~~~~~l~----s~~~~~~tG~~~~vdGG~~ 247 (249)
T 2ew8_A 196 ALSAM----------------FDVLPNML--QAIPRLQVPLDLTGAAAFLA----SDDASFITGQTLAVDGGMV 247 (249)
T ss_dssp --------------------------CTT--SSSCSCCCTHHHHHHHHHHT----SGGGTTCCSCEEEESSSCC
T ss_pred cccch----------------hhHHHHhh--CccCCCCCHHHHHHHHHHHc----CcccCCCCCcEEEECCCcc
Confidence 11000 01111111 57789999999999999999 9999999999999999964
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=319.91 Aligned_cols=249 Identities=25% Similarity=0.335 Sum_probs=212.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++ ++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999999999999998888887777654 56788999999999999888765 5899
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++++. .++||++||..+..
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~-------------- 144 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH--GGKIINACSQAGHV-------------- 144 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--CEEEEEECCGGGTS--------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CCEEEEECchhhcC--------------
Confidence 99999999887778888999999999999999999999999999987641 47999999998876
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++........
T Consensus 145 --------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-- 197 (256)
T 1geg_A 145 --------GNPELA-----------------VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQV-- 197 (256)
T ss_dssp --------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHH--
T ss_pred --------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhc--
Confidence 666666 99999999999999999999999999999999999999865431100
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.... ..++++..+.+...++.+|++.|+|++..+.||+ ++.++|+||+++.+|||++
T Consensus 198 ----~~~~--~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~----s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 198 ----SEAA--GKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA----SPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp ----HHHH--TCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESSSSS
T ss_pred ----cccc--cCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCCCCEEEeCCCcc
Confidence 0000 0012233345556678899999999999999999 9999999999999999964
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=322.98 Aligned_cols=246 Identities=20% Similarity=0.234 Sum_probs=200.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++.+|+++||||++|||+++|++|+++|++|++++|+.....+...+.....+.++.++++|++|++++++++++
T Consensus 2 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMS 81 (264)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999988765544444444334466899999999999999988875
Q ss_pred -cCCCcEEEEcCC--CCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 -AGPVDVLVVNQG--VFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 -~~~id~vi~nAG--~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++||||| .....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||.....
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~------- 151 (264)
T 3i4f_A 82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN---FGRIINYGFQGADS------- 151 (264)
T ss_dssp HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCTTGGG-------
T ss_pred HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC---CCeEEEEeechhcc-------
Confidence 489999999999 55567788999999999999999999999999999999876 68999999974321
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
..+.+... .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.
T Consensus 152 -------------~~~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 201 (264)
T 3i4f_A 152 -------------APGWIYRS-----------------AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA 201 (264)
T ss_dssp -------------CCCCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC
T ss_pred -------------cCCCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh
Confidence 01444555 999999999999999999999999999999999999997654
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. .++..+......+.+|++.|+|++..+.||+ ++.+.++|||++.+|||++.
T Consensus 202 ~-------------------~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~----s~~~~~itG~~i~vdGG~~~ 253 (264)
T 3i4f_A 202 T-------------------IQEARQLKEHNTPIGRSGTGEDIARTISFLC----EDDSDMITGTIIEVTGAVDV 253 (264)
T ss_dssp C-------------------HHHHHHC--------CCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESCSCCC
T ss_pred c-------------------cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHc----CcccCCCCCcEEEEcCceee
Confidence 2 2344445556778899999999999999999 99999999999999999774
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=322.69 Aligned_cols=246 Identities=23% Similarity=0.340 Sum_probs=210.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... + ++.++.+|++|++++++++++
T Consensus 23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~Dv~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY-G-DCQAIPADLSSEAGARRLAQALG 100 (276)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS-S-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-ceEEEEeeCCCHHHHHHHHHHHH
Confidence 346799999999999999999999999999999999999998888887777543 3 788999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCcEEEEecCCccccccccccC
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN-GGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~-~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++. ...++||++||.++..
T Consensus 101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~------- 173 (276)
T 2b4q_A 101 ELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS------- 173 (276)
T ss_dssp HHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC-------
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC-------
Confidence 589999999999988788889999999999999999999999999999987652 1238999999988765
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.+... ..|++||+|+++++++++.|++++||+||+|+||+++|++...
T Consensus 174 ---------------~~~~~~----------------~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 222 (276)
T 2b4q_A 174 ---------------AMGEQA----------------YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH 222 (276)
T ss_dssp ---------------CCCCSC----------------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH
T ss_pred ---------------CCCCCc----------------cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh
Confidence 332221 1799999999999999999999999999999999999998765
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHh--hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALD--GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... +..+.+.. .++.+|++.|+|++..+.||+ ++.++++||+++.+|||++
T Consensus 223 ~~~-------------------~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~----s~~~~~~tG~~i~vdGG~~ 275 (276)
T 2b4q_A 223 IAN-------------------DPQALEADSASIPMGRWGRPEEMAALAISLA----GTAGAYMTGNVIPIDGGFH 275 (276)
T ss_dssp HHH-------------------CHHHHHHHHHTSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred cch-------------------hHHHHHHhhcCCCCCCcCCHHHHHHHHHHHh----CccccCCCCCEEEeCCCcc
Confidence 321 01122233 568899999999999999999 9999999999999999963
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-43 Score=322.50 Aligned_cols=234 Identities=17% Similarity=0.151 Sum_probs=190.6
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
....|+++||++|||||++|||+++|++|+++|++|++++|+.+++.+..++ . .+.++.+|++|++++++++++
T Consensus 19 ~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~---~~~~~~~Dv~~~~~v~~~~~~ 92 (260)
T 3gem_A 19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ---A---GAVALYGDFSCETGIMAFIDL 92 (260)
T ss_dssp --------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH---H---TCEEEECCTTSHHHHHHHHHH
T ss_pred cccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh---c---CCeEEECCCCCHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999998765443332 2 367899999999999888765
Q ss_pred ----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|+||||||+..... .+.++++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 93 ~~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~---~g~iv~isS~~~~~------ 162 (260)
T 3gem_A 93 LKTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE---VADIVHISDDVTRK------ 162 (260)
T ss_dssp HHHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS---SCEEEEECCGGGGT------
T ss_pred HHHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CcEEEEECChhhcC------
Confidence 589999999999876655 5678899999999999999999999999999875 68999999999887
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++|+++++.|+++ +|+||+|+||+++|++..
T Consensus 163 ----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~ 208 (260)
T 3gem_A 163 ----------------GSSKHI-----------------AYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD 208 (260)
T ss_dssp ----------------CCSSCH-----------------HHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----
T ss_pred ----------------CCCCcH-----------------hHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC
Confidence 777777 9999999999999999999998 699999999999998643
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++..+.+....+.+|++.|+|++..++||+ ++.++||+++.+|||++
T Consensus 209 ~---------------------~~~~~~~~~~~p~~r~~~~edva~~v~~L~------~~~~itG~~i~vdGG~~ 256 (260)
T 3gem_A 209 D---------------------AAYRANALAKSALGIEPGAEVIYQSLRYLL------DSTYVTGTTLTVNGGRH 256 (260)
T ss_dssp --------------------------------CCSCCCCCTHHHHHHHHHHH------HCSSCCSCEEEESTTTT
T ss_pred C---------------------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh------hCCCCCCCEEEECCCcc
Confidence 1 233345566778999999999999999998 47899999999999976
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=329.70 Aligned_cols=263 Identities=24% Similarity=0.285 Sum_probs=204.6
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC------------chhHHHHHHHHHhhcCCeEEEEEecCCC
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS------------GKKLEEAKQSIQLATGIEVATYSADVRD 98 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~~~~Dls~ 98 (366)
++.+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++... +.++.++++|++|
T Consensus 4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKAYTAEVDVRD 82 (287)
T ss_dssp SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TSCEEEEECCTTC
T ss_pred cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-CCceEEEEccCCC
Confidence 4567999999999999999999999999999999999998 66666666666544 6789999999999
Q ss_pred HHHHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 99 FDAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 99 ~~~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
++++++++++ ++++|+||||||+.... .+.+.++|++++++|+.|+++++++++|+|.+ .++||++||.
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~ 155 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLTS-----GASIITTGSV 155 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT-----TCEEEEECCH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc-----CcEEEEeccc
Confidence 9999888765 58999999999987655 33789999999999999999999999999943 5799999999
Q ss_pred ccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEc
Q 017757 175 AGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIF 254 (366)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~ 254 (366)
.+........ ..+..+.++...|++||+|+++|+++++.|++++||+||+|+
T Consensus 156 ~~~~~~~~~~----------------------------~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~ 207 (287)
T 3pxx_A 156 AGLIAAAQPP----------------------------GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIH 207 (287)
T ss_dssp HHHHHHHCCC---------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred hhcccccccc----------------------------cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEe
Confidence 8765211000 000011123338999999999999999999999999999999
Q ss_pred CCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHH--HHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHH
Q 017757 255 PPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKK--ALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVE 332 (366)
Q Consensus 255 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i 332 (366)
||+|+|++.+...... ... .........+.... ....++ ++++.|+|++..++||+ |++++|+||+++
T Consensus 208 PG~v~T~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~----s~~a~~itG~~i 277 (287)
T 3pxx_A 208 PTNVNTDMLNSAPMYR----QFR-PDLEAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLA----SDESRYVTGLQF 277 (287)
T ss_dssp ESSBSSTTTSSHHHHH----HHC-TTSSSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHH----SGGGTTCCSCEE
T ss_pred cCccccccccccchhh----hhc-cccccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheec----chhhcCCCCceE
Confidence 9999999876422110 000 00000111121111 223344 89999999999999999 999999999999
Q ss_pred HHHHHHH
Q 017757 333 VVAAGLI 339 (366)
Q Consensus 333 ~~dgG~~ 339 (366)
.+|||++
T Consensus 278 ~vdGG~~ 284 (287)
T 3pxx_A 278 KVDAGAM 284 (287)
T ss_dssp EESTTGG
T ss_pred eECchhh
Confidence 9999976
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=323.17 Aligned_cols=251 Identities=26% Similarity=0.364 Sum_probs=215.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++.+|++|++++++++++ +
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999999998888887777654 56789999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL--IKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
+++|+||||||.....++.+.+.++|++++++|+.++++++++++|. |++++ .++||++||..+..
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~---~g~iv~isS~~~~~--------- 165 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG---TGRIVNIASTGGKQ--------- 165 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT---EEEEEEECCGGGTS---------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC---CeEEEEECcccccc---------
Confidence 89999999999987788889999999999999999999999999999 88765 58999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.....
T Consensus 166 -------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 215 (277)
T 2rhc_B 166 -------------GVVHAA-----------------PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVR 215 (277)
T ss_dssp -------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHH
T ss_pred -------------CCCCCc-----------------cHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhh
Confidence 666666 99999999999999999999999999999999999999865431
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.... .. ...+.++..+.+....+.+|++.|+|++..++||+ ++.++++||+++.+|||++
T Consensus 216 ~~~~---~~-----~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~----s~~~~~~tG~~~~vdGG~~ 275 (277)
T 2rhc_B 216 EHYS---DI-----WEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI----GPGAAAVTAQALNVCGGLG 275 (277)
T ss_dssp HHHH---HH-----HTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTCC
T ss_pred hhcc---cc-----cccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCCCcEEEECCCcc
Confidence 1000 00 00122344445566678999999999999999999 9999999999999999964
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=324.25 Aligned_cols=247 Identities=19% Similarity=0.195 Sum_probs=205.9
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCC----HHHHH
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRD----FDAVK 103 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~----~~~v~ 103 (366)
.+..++++||++|||||++|||+++|++|+++|++|++++|+. ++++++.+++....+.++.++++|++| +++++
T Consensus 15 ~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~ 94 (288)
T 2x9g_A 15 VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCE 94 (288)
T ss_dssp -------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHH
T ss_pred CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHH
Confidence 4556678999999999999999999999999999999999998 888888888764456789999999999 99998
Q ss_pred HHHHh----cCCCcEEEEcCCCCCCCCc-----cC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCc
Q 017757 104 TALDE----AGPVDVLVVNQGVFVPGEL-----EV-----QSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN---GGPA 166 (366)
Q Consensus 104 ~~~~~----~~~id~vi~nAG~~~~~~~-----~~-----~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~---~~~g 166 (366)
+++++ ++++|+||||||+....++ .+ .+.++|++++++|+.++++++++++|.|++++. ...+
T Consensus 95 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g 174 (288)
T 2x9g_A 95 EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL 174 (288)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCE
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCe
Confidence 88765 5899999999998776666 56 789999999999999999999999999987531 1147
Q ss_pred EEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccC
Q 017757 167 SIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD 246 (366)
Q Consensus 167 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~ 246 (366)
+||++||.++.. +.++.. .|++||+|+.+|+++++.|++++
T Consensus 175 ~iv~isS~~~~~----------------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~ 215 (288)
T 2x9g_A 175 SIVNLCDAMVDQ----------------------PCMAFS-----------------LYNMGKHALVGLTQSAALELAPY 215 (288)
T ss_dssp EEEEECCTTTTS----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEEEEecccccC----------------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999998876 666667 99999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCe-EeeCCchhHHHHHHhcCCCCchh
Q 017757 247 DIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSF-IVPCNSEGFLLSIATAGLSPQRS 325 (366)
Q Consensus 247 gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~-~~~~~v~~~~~~L~~~~~s~~~~ 325 (366)
||+||+|+||+|+|++ . .. ++. .+.+...++.+|+ ..|+|++..++||+ ++.++
T Consensus 216 gI~vn~v~PG~v~t~~-~-~~------------------~~~-~~~~~~~~p~~r~~~~pedvA~~v~~l~----s~~~~ 270 (288)
T 2x9g_A 216 GIRVNGVAPGVSLLPV-A-MG------------------EEE-KDKWRRKVPLGRREASAEQIADAVIFLV----SGSAQ 270 (288)
T ss_dssp TEEEEEEEESSCSCCT-T-SC------------------HHH-HHHHHHTCTTTSSCCCHHHHHHHHHHHH----SGGGT
T ss_pred CeEEEEEEeccccCcc-c-cC------------------hHH-HHHHHhhCCCCCCCCCHHHHHHHHHHHh----Ccccc
Confidence 9999999999999997 3 10 122 2344556788999 99999999999999 99999
Q ss_pred HHHHHHHHHHHHHH
Q 017757 326 VLMAFVEVVAAGLI 339 (366)
Q Consensus 326 ~itG~~i~~dgG~~ 339 (366)
++||+.+.+|||++
T Consensus 271 ~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 271 YITGSIIKVDGGLS 284 (288)
T ss_dssp TCCSCEEEESTTGG
T ss_pred CccCCEEEECcchh
Confidence 99999999999975
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=324.43 Aligned_cols=241 Identities=20% Similarity=0.305 Sum_probs=208.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++.. .+.++.++.+|++|.+++++++++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD-AGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT-TTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999998 555555655555543 366899999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+....++.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 167 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR---FGRIVNIGSVNGSR---------- 167 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHH----------
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCEEEEeCChhhcc----------
Confidence 58999999999998888888999999999999999999999999999998876 68999999998887
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|+++++.|++++||+||+|+||+|+|++.+....
T Consensus 168 ------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~ 218 (269)
T 3gk3_A 168 ------------GAFGQA-----------------NYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ 218 (269)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---
T ss_pred ------------CCCCcc-----------------hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch
Confidence 677777 999999999999999999999999999999999999998765321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+.....+....+.+|++.|+|++..+.||+ ++.+.++|||++.+|||++
T Consensus 219 ------------------~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~----s~~~~~itG~~i~vdgG~~ 267 (269)
T 3gk3_A 219 ------------------DVLEAKILPQIPVGRLGRPDEVAALIAFLC----SDDAGFVTGADLAINGGMH 267 (269)
T ss_dssp ----------------------CCSGGGCTTSSCBCHHHHHHHHHHHT----STTCTTCCSCEEEESTTSC
T ss_pred ------------------hHHHHHhhhcCCcCCccCHHHHHHHHHHHh----CCCcCCeeCcEEEECCCEe
Confidence 111113445678899999999999999999 9999999999999999964
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-42 Score=313.60 Aligned_cols=233 Identities=23% Similarity=0.304 Sum_probs=187.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-- 109 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-- 109 (366)
.+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++.
T Consensus 2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-GGRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence 56789999999999999999999999999999999999999999999888765 678999999999999999888764
Q ss_pred -CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 -GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 -~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 147 (252)
T 3h7a_A 81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG---QGKIFFTGATASLR---------- 147 (252)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEEEEGGGTC----------
T ss_pred hCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEECCHHHcC----------
Confidence 7999999999998888899999999999999999999999999999999876 68999999999887
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEE-EEEcCCCCCCCChhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHV-SLIFPPDTETPGLEEEN 267 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~V-n~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+.+|+++++.|++++||+| |+|+||+|+|++.+...
T Consensus 148 ------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~ 198 (252)
T 3h7a_A 148 ------------GGSGFA-----------------AFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR 198 (252)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------
T ss_pred ------------CCCCCc-----------------cHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc
Confidence 777777 999999999999999999999999999 99999999999876532
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFV 331 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~ 331 (366)
. +..+......+.+ +..|+|++..++||+ ++..++++|+.
T Consensus 199 ~-------------------~~~~~~~~~~~~~-~~~pedvA~~~~~l~----s~~~~~~~~~i 238 (252)
T 3h7a_A 199 E-------------------QMFGKDALANPDL-LMPPAAVAGAYWQLY----QQPKSAWTFEM 238 (252)
T ss_dssp -----------------------------------CCHHHHHHHHHHHH----HCCGGGBCSEE
T ss_pred h-------------------hhhhhhhhcCCcc-CCCHHHHHHHHHHHH----hCchhcceeeE
Confidence 1 1122333445666 889999999999999 76666655543
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-42 Score=314.02 Aligned_cols=240 Identities=19% Similarity=0.205 Sum_probs=204.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
||++|||||++|||+++|++|+++| ++|++++|+.++++++.+++ +.++.++++|++|++++++++++ ++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDITEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 7999999999999999999999985 78999999998887776655 45789999999999999888765 58
Q ss_pred CCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 111 PVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 111 ~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
++|++|||||+..+ .++.+.+.++|++++++|+.|+++++++++|+|++++ ++||++||..+..
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~----g~iv~isS~~~~~----------- 142 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN----GNVVFVSSDACNM----------- 142 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCSCCCC-----------
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CeEEEEcCchhcc-----------
Confidence 99999999998654 7888999999999999999999999999999998753 7999999999887
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+++|+++++.|+ +|||||+|+||+++|++.+.....
T Consensus 143 -----------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~ 192 (254)
T 3kzv_A 143 -----------YFSSWG-----------------AYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIREN 192 (254)
T ss_dssp -----------SSCCSH-----------------HHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCC
T ss_pred -----------CCCCcc-----------------hHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcc
Confidence 677777 99999999999999999998 689999999999999987653221
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCc-hhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQ-RSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~-~~~itG~~i~~dgG~~ 339 (366)
... ... .++..+.+....+.+|++.|+|++..+.||+ ++. ++|+||+.+.+|||..
T Consensus 193 ~~~---------~~~-~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~----s~~~~~~itG~~i~vdg~~~ 249 (254)
T 3kzv_A 193 VGP---------SSM-SAEQLKMFRGLKENNQLLDSSVPATVYAKLA----LHGIPDGVNGQYLSYNDPAL 249 (254)
T ss_dssp CCT---------TTS-CHHHHHHHHHHHTTC----CHHHHHHHHHHH----HHCCCGGGTTCEEETTCGGG
T ss_pred cCc---------ccc-CHHHHHHHHHHHhcCCcCCcccHHHHHHHHH----hhcccCCCCccEEEecCccc
Confidence 100 011 2445567778889999999999999999999 998 5999999999999964
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=322.67 Aligned_cols=242 Identities=22% Similarity=0.320 Sum_probs=212.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~---~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.+++||++|||||++|||+++|++|+++|+ +|++++|+.++++++.+++.... +.++.++++|++|++++++++++
T Consensus 29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 458899999999999999999999999998 99999999999999998887654 56899999999999999999876
Q ss_pred ----cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.++..
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~IV~isS~~~~~----- 180 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN---SGDIVNLGSIAGRD----- 180 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCGGGTS-----
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEECChhhcC-----
Confidence 479999999999876 57788999999999999999999999999999999876 68999999999887
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.
T Consensus 181 -----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 226 (287)
T 3rku_A 181 -----------------AYPTGS-----------------IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFS 226 (287)
T ss_dssp -----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHH
T ss_pred -----------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccc
Confidence 777777 9999999999999999999999999999999999999986
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...... .+++.. ..........|+|++..++||+ ++.+.+++|+++.+|||..
T Consensus 227 ~~~~~~---------------~~~~~~----~~~~~~~p~~pedvA~~v~~l~----s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 227 LVRYRG---------------NEEQAK----NVYKDTTPLMADDVADLIVYAT----SRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp HHHTTT---------------CHHHHH----HHHTTSCCEEHHHHHHHHHHHH----TSCTTEEEEEEEEEETTEE
T ss_pred cccccC---------------cHHHHH----HhhcccCCCCHHHHHHHHHHHh----CCCCCeEecceEEeeCCCC
Confidence 542211 223222 2233445669999999999999 9999999999999999854
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=317.35 Aligned_cols=234 Identities=24% Similarity=0.380 Sum_probs=199.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHh-
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
++++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.... ..++.++++|++|.+++++++++
T Consensus 2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999988887653 26789999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||+.....+ +.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 82 ~~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~------- 150 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK---NGYIFNVASRAAKY------- 150 (250)
T ss_dssp HHHHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECC------------
T ss_pred HHhcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CeEEEEEccHHhcC-------
Confidence 5899999999999877777 789999999999999999999999999999876 68999999998876
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.+... .|++||+|+.+|+++++.|++++||+||+|+||+|+|++.+.
T Consensus 151 ---------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 198 (250)
T 3nyw_A 151 ---------------GFADGG-----------------IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKK 198 (250)
T ss_dssp -----------------CCTT-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH
T ss_pred ---------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhh
Confidence 455556 899999999999999999999999999999999999998664
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCC-CchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLS-PQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s-~~~~~itG~~i~~dgG~~ 339 (366)
... ..+.++++.|+|++..+.||+ + +.+.+++|.+|.+|||-.
T Consensus 199 ~~~---------------------------~~~~~~~~~p~dva~~v~~l~----s~~~~~~~~~~~i~vd~~~~ 242 (250)
T 3nyw_A 199 AGT---------------------------PFKDEEMIQPDDLLNTIRCLL----NLSENVCIKDIVFEMKKSII 242 (250)
T ss_dssp TTC---------------------------CSCGGGSBCHHHHHHHHHHHH----TSCTTEECCEEEEEEHHHHH
T ss_pred cCC---------------------------CcccccCCCHHHHHHHHHHHH----cCCCceEeeEEEEEeecccc
Confidence 321 123467888999999999999 6 667789999999999954
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=322.18 Aligned_cols=248 Identities=16% Similarity=0.120 Sum_probs=207.6
Q ss_pred cCCCCCcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHH
Q 017757 27 RPKPVRIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 27 ~~~~~~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~ 104 (366)
++++...++++|++|||||+ +|||+++|++|+++|++|++++|+.... +..+++....+ ++.++++|++|++++++
T Consensus 4 ~~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~ 81 (271)
T 3ek2_A 4 HHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFG-SELVFPCDVADDAQIDA 81 (271)
T ss_dssp -----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTT-CCCEEECCTTCHHHHHH
T ss_pred CCCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcC-CcEEEECCCCCHHHHHH
Confidence 34566788999999999999 9999999999999999999999996543 34444544433 58899999999999998
Q ss_pred HHHh----cCCCcEEEEcCCCCCC----CCccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 105 ALDE----AGPVDVLVVNQGVFVP----GELEV-QSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 105 ~~~~----~~~id~vi~nAG~~~~----~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++++ ++++|++|||||+... .++.+ .+.++|++++++|+.++++++++++|+|++ .++||++||..
T Consensus 82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~g~iv~isS~~ 156 (271)
T 3ek2_A 82 LFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-----DASLLTLSYLG 156 (271)
T ss_dssp HHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-----EEEEEEEECGG
T ss_pred HHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-----CceEEEEeccc
Confidence 8875 5899999999998765 55565 899999999999999999999999999975 47999999998
Q ss_pred cccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcC
Q 017757 176 GQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255 (366)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~P 255 (366)
+.. +.++.. .|++||+|+++|+++++.|++++||+||+|+|
T Consensus 157 ~~~----------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P 197 (271)
T 3ek2_A 157 AER----------------------AIPNYN-----------------TMGLAKAALEASVRYLAVSLGAKGVRVNAISA 197 (271)
T ss_dssp GTS----------------------BCTTTT-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred ccc----------------------CCCCcc-----------------chhHHHHHHHHHHHHHHHHHHhcCcEEEEEec
Confidence 877 667777 99999999999999999999999999999999
Q ss_pred CCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHH
Q 017757 256 PDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVA 335 (366)
Q Consensus 256 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~d 335 (366)
|+|+|++..... ..++..+.+....+.+|++.|+|++..++||+ ++.+.++||+++.+|
T Consensus 198 G~v~T~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~----s~~~~~~tG~~i~vd 256 (271)
T 3ek2_A 198 GPIKTLAASGIK-----------------SFGKILDFVESNSPLKRNVTIEQVGNAGAFLL----SDLASGVTAEVMHVD 256 (271)
T ss_dssp CCC-----CCCH-----------------HHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSEEEEES
T ss_pred Ccccchhhhccc-----------------chHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc----CcccCCeeeeEEEEC
Confidence 999999865432 12455667778889999999999999999999 999999999999999
Q ss_pred HHHHHH
Q 017757 336 AGLIRF 341 (366)
Q Consensus 336 gG~~~~ 341 (366)
||++..
T Consensus 257 gG~~~~ 262 (271)
T 3ek2_A 257 SGFNAV 262 (271)
T ss_dssp TTGGGB
T ss_pred CCeeee
Confidence 998743
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=327.63 Aligned_cols=247 Identities=17% Similarity=0.164 Sum_probs=209.9
Q ss_pred CCCCcC-CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCchhHHHHHHHHHhhcCCeEEEEEecCCCHH------
Q 017757 29 KPVRIP-IKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSADVRDFD------ 100 (366)
Q Consensus 29 ~~~~~~-l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~------ 100 (366)
+...|. +++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++....+.++.++++|++|++
T Consensus 37 ~~~~m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~ 116 (328)
T 2qhx_A 37 RGSHMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG 116 (328)
T ss_dssp --------CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC---
T ss_pred CCCcccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccc
Confidence 333343 8999999999999999999999999999999999 99998888888886444678999999999999
Q ss_pred -----------HHHHHHHh----cCCCcEEEEcCCCCCCCCccCCC--------------HHHHHHHHHHHHHHHHHHHH
Q 017757 101 -----------AVKTALDE----AGPVDVLVVNQGVFVPGELEVQS--------------LDEVRLMIDVNITGSFHMIK 151 (366)
Q Consensus 101 -----------~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~--------------~~~~~~~~~vN~~~~~~l~~ 151 (366)
++++++++ ++++|+||||||+....++.+.+ .++|++++++|+.+++++++
T Consensus 117 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 196 (328)
T 2qhx_A 117 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK 196 (328)
T ss_dssp ----CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 88888765 58999999999998777777888 99999999999999999999
Q ss_pred HHHHHHHhcc---CCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhh
Q 017757 152 AALPLIKKRQ---NGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIAS 228 (366)
Q Consensus 152 ~~~~~l~~~~---~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~as 228 (366)
+++|.|++++ .+..++||++||..+.. +.++.. .|++|
T Consensus 197 ~~~~~m~~~~~~~~~~~g~IV~isS~~~~~----------------------~~~~~~-----------------~Y~as 237 (328)
T 2qhx_A 197 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQ----------------------PLLGYT-----------------IYTMA 237 (328)
T ss_dssp HHHHHHHHSCGGGSCSCEEEEEECCTTTTS----------------------CCTTCH-----------------HHHHH
T ss_pred HHHHHHHhcCCcCCCCCcEEEEECchhhcc----------------------CCCCcH-----------------HHHHH
Confidence 9999998753 11147999999999876 666677 99999
Q ss_pred HHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCC-CeEeeCC
Q 017757 229 KFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG-SFIVPCN 307 (366)
Q Consensus 229 Kaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g-r~~~~~~ 307 (366)
|+|+++|+++++.|++++||+||+|+||+|+|++ ... ++..+.+...++.+ +++.|+|
T Consensus 238 Kaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~--------------------~~~~~~~~~~~p~~~r~~~ped 296 (328)
T 2qhx_A 238 KGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP--------------------PAVWEGHRSKVPLYQRDSSAAE 296 (328)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC--------------------HHHHHHHHTTCTTTTSCBCHHH
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc--------------------HHHHHHHHhhCCCCCCCCCHHH
Confidence 9999999999999999999999999999999997 321 12234455667888 9999999
Q ss_pred chhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 308 SEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 308 v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
++..++||+ ++.+.++||+++.+|||++
T Consensus 297 vA~~v~~l~----s~~~~~itG~~i~vdGG~~ 324 (328)
T 2qhx_A 297 VSDVVIFLC----SSKAKYITGTCVKVDGGYS 324 (328)
T ss_dssp HHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHh----CccccCccCcEEEECCCcc
Confidence 999999999 9999999999999999975
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=323.58 Aligned_cols=250 Identities=24% Similarity=0.289 Sum_probs=212.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCC---eEEEEEecCCCHHHHHHHHHh-
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGI---EVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~---~v~~~~~Dls~~~~v~~~~~~- 108 (366)
+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +. ++.++.+|++|++++++++++
T Consensus 22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA-GVPAEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 5689999999999999999999999999999999999999888888887654 33 789999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCC--ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVPGE--LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|+||||||+....+ +.+.+.++|++++++|+.++++++++++|.|++++ ++||++||.++..
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----g~IV~isS~~~~~----- 171 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK----GEIVNVSSIVAGP----- 171 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----CEEEEECCGGGSS-----
T ss_pred HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC----CEEEEEcCchhcc-----
Confidence 589999999999877666 88899999999999999999999999999998753 7999999998875
Q ss_pred cCccCccccccccccCCCC-CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 184 TNMKGINENKLCESSGKGH-GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+. ++.. .|++||+|+++++++++.|++++||+||+|+||+|+|++
T Consensus 172 -----------------~~~~~~~-----------------~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~ 217 (297)
T 1xhl_A 172 -----------------QAHSGYP-----------------YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF 217 (297)
T ss_dssp -----------------SCCTTSH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred -----------------CCCCCcc-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence 44 5566 899999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCc-hhHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQ-RSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~-~~~itG~~i~~dgG~~~ 340 (366)
...... ..... .+.++..+.+...++.+|++.|+|++..++||+ ++. ++++||+.+.+|||++.
T Consensus 218 ~~~~~~--~~~~~--------~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~----s~~~~~~itG~~i~vdGG~~~ 282 (297)
T 1xhl_A 218 MGAMGL--PETAS--------DKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA----DRNLSSYIIGQSIVADGGSTL 282 (297)
T ss_dssp HHHTTC--CHHHH--------HHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH----CHHHHTTCCSCEEEESTTGGG
T ss_pred cccccc--ccccc--------cchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CCcccCCccCcEEEECCCccc
Confidence 654310 00000 001223334445568899999999999999999 888 99999999999999763
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=320.67 Aligned_cols=252 Identities=18% Similarity=0.255 Sum_probs=210.1
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
..++++||++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++... +.++.++.+|++|.+++++++++
T Consensus 23 ~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-CCCeEEEEcCCCCHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999998754 45555556543 56789999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++ .++||++||..+..
T Consensus 102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~------- 169 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-----GGRLILMGSITGQA------- 169 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-----TCEEEEECCGGGTC-------
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-----CCeEEEEechhhcc-------
Confidence 589999999999987788889999999999999999999999999999932 58999999998865
Q ss_pred ccCccccccccccCCCCCC-ccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 186 MKGINENKLCESSGKGHGG-YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.+. .. .|++||+|+++|+++++.|++++||+||+|+||+++|++..
T Consensus 170 ---------------~~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 217 (283)
T 1g0o_A 170 ---------------KAVPKHA-----------------VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYH 217 (283)
T ss_dssp ---------------SSCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred ---------------CCCCCCc-----------------chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhh
Confidence 4332 55 89999999999999999999999999999999999999866
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHh--hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALD--GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...... . ......++ +..+.+.. ..+.+|++.|+|++..++||+ ++.++|+||+++.+|||++
T Consensus 218 ~~~~~~------~-~~~~~~~~-~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~----s~~~~~itG~~i~vdgG~~ 282 (283)
T 1g0o_A 218 AVCREY------I-PNGENLSN-EEVDEYAAVQWSPLRRVGLPIDIARVVCFLA----SNDGGWVTGKVIGIDGGAC 282 (283)
T ss_dssp HHGGGG------S-TTCTTCCH-HHHHHHHHHHSCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTCC
T ss_pred hhhhhc------c-ccccccCH-HHHHHHHhhcCCCCCCCcCHHHHHHHHHHHh----CccccCcCCCEEEeCCCcc
Confidence 532110 0 00001122 33344555 678899999999999999999 9999999999999999963
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=318.16 Aligned_cols=240 Identities=24% Similarity=0.285 Sum_probs=211.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++|++|||||++|||+++|++|+++|++|++ ..|+.+.+++..+++... +.++.++.+|++|++++++++++
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN-GGNGRLLSFDVANREQCREVLEHEIA 100 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999966 557777888888777665 66899999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||......+.+.+.+++++++++|+.+++++++.+++.|.+++. .++||++||..+..
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~g~iv~isS~~~~~--------- 169 (267)
T 4iiu_A 101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ--GGRIITLSSVSGVM--------- 169 (267)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--CEEEEEECCHHHHH---------
T ss_pred HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CcEEEEEcchHhcc---------
Confidence 589999999999988888889999999999999999999999999998874332 68999999999887
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+.+|+++++.|++++||+||+|+||+|+|++.+..
T Consensus 170 -------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~- 218 (267)
T 4iiu_A 170 -------------GNRGQV-----------------NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME- 218 (267)
T ss_dssp -------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-
T ss_pred -------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-
Confidence 667777 9999999999999999999999999999999999999986531
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
++..+.....++.++++.|+|++..+.||+ +++++++|||++.+|||+
T Consensus 219 -------------------~~~~~~~~~~~p~~~~~~~edva~~~~~L~----s~~~~~itG~~i~vdGG~ 266 (267)
T 4iiu_A 219 -------------------ESALKEAMSMIPMKRMGQAEEVAGLASYLM----SDIAGYVTRQVISINGGM 266 (267)
T ss_dssp -------------------HHHHHHHHHTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTC
T ss_pred -------------------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CCcccCccCCEEEeCCCc
Confidence 334456677889999999999999999999 999999999999999995
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=315.88 Aligned_cols=241 Identities=25% Similarity=0.288 Sum_probs=206.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++|++|||||++|||+++|++|+++|++|++++|+.++ ++..+++. + .++++|++|++++++++++
T Consensus 2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-----G-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-----C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-----C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999877 66555543 3 7889999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---~g~iv~isS~~~~~---------- 141 (256)
T 2d1y_A 75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG---GGAIVNVASVQGLF---------- 141 (256)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT---CEEEEEECCGGGTS----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEEccccccC----------
Confidence 58999999999998778888999999999999999999999999999998865 68999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++......
T Consensus 142 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~ 192 (256)
T 2d1y_A 142 ------------AEQENA-----------------AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIA 192 (256)
T ss_dssp ------------BCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC
T ss_pred ------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccc
Confidence 556666 999999999999999999999999999999999999997654211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ...++..+.+....+.++++.|+|++..++||+ ++.++++||+.+.+|||++
T Consensus 193 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~----s~~~~~~~G~~~~v~gG~~ 246 (256)
T 2d1y_A 193 LS-------------PDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA----SEKASFITGAILPVDGGMT 246 (256)
T ss_dssp ---------------------CHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred cc-------------cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCCCCEEEECCCcc
Confidence 00 001122233455678899999999999999999 9999999999999999975
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-43 Score=320.43 Aligned_cols=237 Identities=28% Similarity=0.334 Sum_probs=207.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|++++++++++ +
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999999988877766555 34688999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~----------- 143 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG---GGSIVNISSAAGLM----------- 143 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CCEEEEECchhhcc-----------
Confidence 8999999999988777888999999999999999999999999999998875 68999999998876
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.+.....
T Consensus 144 -----------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~ 195 (254)
T 1hdc_A 144 -----------GLALTS-----------------SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR 195 (254)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC
T ss_pred -----------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh
Confidence 666666 9999999999999999999999999999999999999986643110
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeE-eeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFI-VPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~-~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. +.+....+.+|++ .|+|++..++||+ ++.++++||+.+.+|||++
T Consensus 196 --~~-----------------~~~~~~~p~~~~~~~~~dvA~~v~~l~----s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 196 --QG-----------------EGNYPNTPMGRVGNEPGEIAGAVVKLL----SDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp --CS-----------------TTSCTTSTTSSCB-CHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred --HH-----------------HHHHhcCCCCCCCCCHHHHHHHHHHHh----CchhcCCCCCEEEECCCcc
Confidence 00 0112234678888 9999999999999 9999999999999999976
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=320.22 Aligned_cols=250 Identities=24% Similarity=0.284 Sum_probs=211.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCC---eEEEEEecCCCHHHHHHHHHh--
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGI---EVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~---~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +. ++.++.+|++|++++++++++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS-GVSEKQVNSVVADVTTEDGQDQIINSTL 81 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999888888777654 33 789999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCC----ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 --AGPVDVLVVNQGVFVPGE----LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|+||||||.....+ +.+.+.++|++++++|+.++++++++++|.|++++ ++||++||..+..
T Consensus 82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----g~iv~isS~~~~~---- 153 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK----GEIVNVSSIVAGP---- 153 (280)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCGGGSS----
T ss_pred HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC----CcEEEecCccccC----
Confidence 589999999999877666 78889999999999999999999999999998753 7999999998875
Q ss_pred ccCccCccccccccccCCCC-CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGH-GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+. ++.. .|++||+|+++|+++++.|++++||+||+|+||+++|+
T Consensus 154 ------------------~~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 198 (280)
T 1xkq_A 154 ------------------QAQPDFL-----------------YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG 198 (280)
T ss_dssp ------------------SCCCSSH-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred ------------------CCCCccc-----------------HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCC
Confidence 44 5556 89999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCc-hhHHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQ-RSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~-~~~itG~~i~~dgG~~~ 340 (366)
+...... .... ..+.++..+.+...++.+|++.|+|++..++||+ ++. ++++||+.+.+|||++.
T Consensus 199 ~~~~~~~--~~~~--------~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~----s~~~~~~~tG~~i~vdgG~~~ 264 (280)
T 1xkq_A 199 FTNAMGM--PDQA--------SQKFYNFMASHKECIPIGAAGKPEHIANIILFLA----DRNLSFYILGQSIVADGGTSL 264 (280)
T ss_dssp HHHHTTC--CHHH--------HHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH----CHHHHTTCCSCEEEESTTGGG
T ss_pred ccccccc--cccc--------ccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhc----CcccccCccCCeEEECCCccc
Confidence 8654210 0000 0011233334445568899999999999999999 888 89999999999999864
Q ss_pred H
Q 017757 341 F 341 (366)
Q Consensus 341 ~ 341 (366)
.
T Consensus 265 ~ 265 (280)
T 1xkq_A 265 V 265 (280)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=319.48 Aligned_cols=242 Identities=20% Similarity=0.219 Sum_probs=204.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCH----HHHHHHHH
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDF----DAVKTALD 107 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~----~~v~~~~~ 107 (366)
.++++|++|||||++|||+++|++|+++|++|++++| +.++++++.+++....+.++.++++|++|. ++++++++
T Consensus 7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence 4578999999999999999999999999999999999 888888888888765466899999999999 99888876
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEE
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSL-----------DEVRLMIDVNITGSFHMIKAALPLIKKRQN---GGPASIA 169 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~-----------~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~---~~~g~iv 169 (366)
+ ++++|+||||||+....++.+.+. ++|++++++|+.++++++++++|+|+ ++. +..++||
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv 165 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVV 165 (276)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEE
Confidence 5 589999999999987777788888 99999999999999999999999987 331 1128999
Q ss_pred EecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcE
Q 017757 170 LMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIH 249 (366)
Q Consensus 170 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~ 249 (366)
++||..+.. +.++.. .|++||+|+++|+++++.|++++||+
T Consensus 166 ~isS~~~~~----------------------~~~~~~-----------------~Y~asK~a~~~l~~~la~e~~~~gi~ 206 (276)
T 1mxh_A 166 NLCDAMTDL----------------------PLPGFC-----------------VYTMAKHALGGLTRAAALELAPRHIR 206 (276)
T ss_dssp EECCGGGGS----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EECchhhcC----------------------CCCCCe-----------------ehHHHHHHHHHHHHHHHHHHhhcCeE
Confidence 999999876 666667 99999999999999999999999999
Q ss_pred EEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCC-eEeeCCchhHHHHHHhcCCCCchhHHH
Q 017757 250 VSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGS-FIVPCNSEGFLLSIATAGLSPQRSVLM 328 (366)
Q Consensus 250 Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr-~~~~~~v~~~~~~L~~~~~s~~~~~it 328 (366)
||+|+||+++|+ .. .. ++..+.+....+.+| ++.|+|++..++||+ ++.+.++|
T Consensus 207 v~~v~PG~v~t~--~~------------------~~-~~~~~~~~~~~p~~r~~~~~~dva~~v~~l~----s~~~~~~t 261 (276)
T 1mxh_A 207 VNAVAPGLSLLP--PA------------------MP-QETQEEYRRKVPLGQSEASAAQIADAIAFLV----SKDAGYIT 261 (276)
T ss_dssp EEEEEESSBSCC--SS------------------SC-HHHHHHHHTTCTTTSCCBCHHHHHHHHHHHH----SGGGTTCC
T ss_pred EEEEecCcccCC--cc------------------CC-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh----CccccCcc
Confidence 999999999998 11 01 233344556678889 999999999999999 99999999
Q ss_pred HHHHHHHHHHH
Q 017757 329 AFVEVVAAGLI 339 (366)
Q Consensus 329 G~~i~~dgG~~ 339 (366)
|+.+.+|||++
T Consensus 262 G~~~~vdgG~~ 272 (276)
T 1mxh_A 262 GTTLKVDGGLI 272 (276)
T ss_dssp SCEEEESTTGG
T ss_pred CcEEEECCchh
Confidence 99999999975
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-42 Score=315.10 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=208.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|++|||||++|||+++|++|+++|++|++++|+.+ ++..+++... +.++.++.+|++|++++++++++ +
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH-GVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT-SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc-CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999999876 4455555443 56788999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~----------- 143 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN---WGRIINIASVHGLV----------- 143 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCGGGTS-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEEcCchhcc-----------
Confidence 8999999999998777888899999999999999999999999999998865 68999999998876
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.......
T Consensus 144 -----------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~ 195 (255)
T 2q2v_A 144 -----------GSTGKA-----------------AYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDD 195 (255)
T ss_dssp -----------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHH
T ss_pred -----------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhccc
Confidence 666666 9999999999999999999999999999999999999986542110
Q ss_pred CCcchhhhhccCCCCCHHHHHHHH-HhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKA-LDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~-~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+.. .....+..+.+ ....+.++++.|+|++..++||+ ++.++++||+.+.+|||++
T Consensus 196 ~~~~---------~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~----s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 196 RAAN---------GGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLC----SEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp HHHH---------TCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTGG
T ss_pred cccc---------ccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHh----CCccCCCCCCEEEECCCcc
Confidence 0000 00111122333 45568899999999999999999 9999999999999999975
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-42 Score=318.34 Aligned_cols=242 Identities=24% Similarity=0.302 Sum_probs=206.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++. ++.++++|++|++++++++++
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 45889999999999999999999999999999999999888777665543 378899999999999888765
Q ss_pred cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.... .++.+.+.++|++++++|+.++++++++++|+|+++ .++||++||..+..
T Consensus 80 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~g~iv~isS~~~~~--------- 146 (270)
T 1yde_A 80 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS----QGNVINISSLVGAI--------- 146 (270)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCHHHHH---------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC----CCEEEEEcCccccC---------
Confidence 5899999999998753 678889999999999999999999999999999865 47999999988876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.+...
T Consensus 147 -------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~ 196 (270)
T 1yde_A 147 -------------GQAQAV-----------------PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA 196 (270)
T ss_dssp -------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH
T ss_pred -------------CCCCCc-----------------ccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhh
Confidence 666666 89999999999999999999999999999999999999865432
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
... ..+.+.........+.+|++.|+|++..++||+ ++ ++|+|||++.+|||++.
T Consensus 197 ~~~-------------~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~----s~-~~~itG~~i~vdGG~~~ 251 (270)
T 1yde_A 197 ALM-------------PDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA----SE-ANFCTGIELLVTGGAEL 251 (270)
T ss_dssp TTS-------------SSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH----HH-CTTCCSCEEEESTTTTS
T ss_pred hcc-------------cchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHc----cc-CCCcCCCEEEECCCeec
Confidence 111 112222222334578899999999999999999 77 78999999999999763
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-42 Score=314.56 Aligned_cols=251 Identities=23% Similarity=0.240 Sum_probs=212.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++. .++.++++|++|++++++++++
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----NGGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999887776655543 2678899999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++. .++||++||..+..
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--------- 151 (263)
T 3ak4_A 83 ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNT--KGVIVNTASLAAKV--------- 151 (263)
T ss_dssp HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--CCEEEEECCGGGTS---------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CeEEEEeccccccc---------
Confidence 589999999999887788889999999999999999999999999999987542 47999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+... .|++||+|+++++++++.|++++||+||+|+||+++|++.....
T Consensus 152 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~ 201 (263)
T 3ak4_A 152 -------------GAPLLA-----------------HYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREI 201 (263)
T ss_dssp -------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHH
T ss_pred -------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhc
Confidence 666666 99999999999999999999999999999999999999865421
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... ... ...++++..+.+....+.+|++.|+|++..+.||+ ++.++++||+.+.+|||++
T Consensus 202 ~~~------~~~--~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~----s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 202 IWE------AEL--RGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLA----SDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp HHH------HHH--HTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESSSSS
T ss_pred ccc------ccc--cccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCCCCEEEECcCEe
Confidence 100 000 00122444455666778899999999999999999 9999999999999999964
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-42 Score=317.66 Aligned_cols=243 Identities=14% Similarity=0.086 Sum_probs=211.3
Q ss_pred CCcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 31 VRIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.+.++++|++|||||+ +|||+++|++|+++|++|++++|+. .++..+++....+ ++.++++|++|++++++++++
T Consensus 20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN-PAAVLPCDVISDQEIKDLFVE 96 (280)
T ss_dssp --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC-CSEEEECCTTCHHHHHHHHHH
T ss_pred cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHHH
Confidence 3456899999999988 7899999999999999999999987 3444555554433 588999999999999988876
Q ss_pred ----cCCCcEEEEcCCCCCC----CCccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccc
Q 017757 109 ----AGPVDVLVVNQGVFVP----GELEV-QSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~----~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~ 179 (366)
++++|++|||||+... .++.+ .+.++|++++++|+.++++++++++|+|+++ .++||++||.++..
T Consensus 97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~g~iv~isS~~~~~- 171 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR----NASMVALTYIGAEK- 171 (280)
T ss_dssp HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT----TCEEEEEECGGGTS-
T ss_pred HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCeEEEEecccccc-
Confidence 5899999999998764 45555 8999999999999999999999999999865 48999999999887
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+
T Consensus 172 ---------------------~~~~~~-----------------~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~ 213 (280)
T 3nrc_A 172 ---------------------AMPSYN-----------------TMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIK 213 (280)
T ss_dssp ---------------------CCTTTH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCC
T ss_pred ---------------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeecccc
Confidence 777777 999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 260 TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 260 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
|++..... ..++..+......+.+|+..|+|++..++||+ ++.+.++||+++.+|||++
T Consensus 214 T~~~~~~~-----------------~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~----s~~~~~~tG~~i~vdgG~~ 272 (280)
T 3nrc_A 214 TLAASGIS-----------------NFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLC----SDMATGITGEVVHVDAGYH 272 (280)
T ss_dssp CSGGGGCT-----------------THHHHHHHHHHHSTTCSCCCHHHHHHHHHHTT----SGGGTTCCSCEEEESTTGG
T ss_pred chhhhcCc-----------------chHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CcccCCcCCcEEEECCCcc
Confidence 99866532 23566677778889999999999999999999 9999999999999999986
Q ss_pred H
Q 017757 340 R 340 (366)
Q Consensus 340 ~ 340 (366)
.
T Consensus 273 ~ 273 (280)
T 3nrc_A 273 C 273 (280)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=314.91 Aligned_cols=240 Identities=22% Similarity=0.218 Sum_probs=213.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--- 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--- 109 (366)
.++||++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++... +.++.++.+|++|.+++++++++.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT-TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc-CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999885 77778888888777654 668999999999999998887652
Q ss_pred -------CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 110 -------GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 110 -------~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
+++|++|||||+.....+.+.+.++|++++++|+.++++++++++|+|++ .++||++||.++..
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~~~iv~isS~~~~~---- 153 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-----NSRIINISSAATRI---- 153 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-----EEEEEEECCGGGTS----
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-----CCEEEEeCChhhcc----
Confidence 35999999999988888889999999999999999999999999999854 47999999999887
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++
T Consensus 154 ------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (255)
T 3icc_A 154 ------------------SLPDFI-----------------AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDM 198 (255)
T ss_dssp ------------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSS
T ss_pred ------------------CCCCcc-----------------hhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccc
Confidence 777777 999999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+... ..++..+......+.+|++.|+|++..+.||+ ++.+.++||+++.+|||++
T Consensus 199 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----s~~~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 199 NAELL-----------------SDPMMKQYATTISAFNRLGEVEDIADTAAFLA----SPDSRWVTGQLIDVSGGSC 254 (255)
T ss_dssp STTTT-----------------TSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESSSTT
T ss_pred hhhhc-----------------ccHHHHHhhhccCCcCCCCCHHHHHHHHHHHh----CcccCCccCCEEEecCCee
Confidence 76532 22444556666778899999999999999999 9999999999999999974
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=316.55 Aligned_cols=238 Identities=17% Similarity=0.199 Sum_probs=207.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAK-EGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GP 111 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~ 111 (366)
.++|++|||||++|||+++|++|++ .|++|++++|+.+.. ..++.++++|++|+++++++++.. ++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 70 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------AENLKFIKADLTKQQDITNVLDIIKNVS 70 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------CTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------cccceEEecCcCCHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999 789999999986521 235789999999999999998653 68
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++ .++||++||..+..
T Consensus 71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~------------- 132 (244)
T 4e4y_A 71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV-----GASIVFNGSDQCFI------------- 132 (244)
T ss_dssp EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-----EEEEEEECCGGGTC-------------
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc-----CcEEEEECCHHHcc-------------
Confidence 999999999988888899999999999999999999999999999876 37999999999887
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+.......
T Consensus 133 ---------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~ 186 (244)
T 4e4y_A 133 ---------AKPNSF-----------------AYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYA 186 (244)
T ss_dssp ---------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHH
T ss_pred ---------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhh
Confidence 777777 999999999999999999999999999999999999998776432210
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ....+++..+......+.+|++.|+|++..++||+ ++.+.++||+++.+|||++
T Consensus 187 ~~--------~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~----s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 187 NN--------VGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLL----SDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp HH--------HTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred hh--------cCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHh----cCccccccCCeEeECCCcc
Confidence 00 01245667777888899999999999999999999 9999999999999999976
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=311.55 Aligned_cols=241 Identities=22% Similarity=0.276 Sum_probs=187.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++++|++|||||++|||++++++|+++|++|++++|+.+. . . ..+.++.+|++|++++++++++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~-~--~~~~~~~~D~~d~~~~~~~~~~~~~~ 71 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------E-Q--YPFATEVMDVADAAQVAQVCQRLLAE 71 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------S-C--CSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------h-c--CCceEEEcCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999998752 1 1 1277889999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---~g~iv~isS~~~~~---------- 138 (250)
T 2fwm_X 72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR---GGAIVTVASDAAHT---------- 138 (250)
T ss_dssp CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCGGGTS----------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC---CCEEEEECchhhCC----------
Confidence 58999999999998778888999999999999999999999999999998876 68999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++......
T Consensus 139 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~ 189 (250)
T 2fwm_X 139 ------------PRIGMS-----------------AYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV 189 (250)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------
T ss_pred ------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc
Confidence 666667 999999999999999999999999999999999999998654211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. .... ....+..+......+.+|++.|+|++..+.||+ ++.++++||+.+.+|||++
T Consensus 190 ~~-~~~~--------~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~----s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 190 SD-DAEE--------QRIRGFGEQFKLGIPLGKIARPQEIANTILFLA----SDLASHITLQDIVVDGGST 247 (250)
T ss_dssp -----------------------------------CHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred Ch-hHHH--------HHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh----CccccCCCCCEEEECCCcc
Confidence 00 0000 000000011112467889999999999999999 9999999999999999965
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=319.54 Aligned_cols=247 Identities=13% Similarity=0.105 Sum_probs=203.6
Q ss_pred cCCCCCEEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCchh-HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 33 IPIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSGKK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 33 ~~l~gk~vLITGa--s~gIG~aia~~L~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.++++|++||||| ++|||+++|++|+++|++|++++|+.++ ++++.++ .+.++.++++|++|++++++++++
T Consensus 3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR----LPAKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT----SSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh----cCCCceEEEccCCCHHHHHHHHHHH
Confidence 4588999999999 9999999999999999999999998765 2443332 245788899999999999888775
Q ss_pred ---cC---CCcEEEEcCCCCC-----CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc
Q 017757 109 ---AG---PVDVLVVNQGVFV-----PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (366)
Q Consensus 109 ---~~---~id~vi~nAG~~~-----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~ 177 (366)
++ ++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..+
T Consensus 79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~iss~~~- 152 (269)
T 2h7i_A 79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-----GGSIVGMDFDPS- 152 (269)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEEECCCS-
T ss_pred HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-----CCeEEEEcCccc-
Confidence 46 8999999999876 467788999999999999999999999999999965 379999999765
Q ss_pred cccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 178 CWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
. +.+.+. .|++||+|+++|+++++.|++++||+||+|+||+
T Consensus 153 ~----------------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~ 193 (269)
T 2h7i_A 153 R----------------------AMPAYN-----------------WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGP 193 (269)
T ss_dssp S----------------------CCTTTH-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred c----------------------ccCchH-----------------HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCc
Confidence 3 555666 8999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCC-CeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHH
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSG-SFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAA 336 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~g-r~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dg 336 (366)
|+|++........... ... ...++..+.+...+|.+ |++.|+|++..++||+ |+.++|+||+++.+||
T Consensus 194 v~T~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~----s~~~~~itG~~i~vdG 262 (269)
T 2h7i_A 194 IRTLAMSAIVGGALGE-EAG------AQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALL----SDWLPATTGDIIYADG 262 (269)
T ss_dssp CCCHHHHHHHTTTTCH-HHH------HHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHH----SSSCTTCCSEEEEEST
T ss_pred ccchhhhccccccchh-hHH------HHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHh----CchhccCcceEEEecC
Confidence 9999865432110000 000 00012334455667889 7999999999999999 9999999999999999
Q ss_pred HHH
Q 017757 337 GLI 339 (366)
Q Consensus 337 G~~ 339 (366)
|++
T Consensus 263 G~~ 265 (269)
T 2h7i_A 263 GAH 265 (269)
T ss_dssp TGG
T ss_pred Cee
Confidence 975
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=316.18 Aligned_cols=239 Identities=22% Similarity=0.298 Sum_probs=207.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|++++++++++
T Consensus 2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (253)
T 1hxh_A 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999988877776655 45788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|+||||||.....++.+.+.++|++++++|+.++++++++++|.|++++ ++||++||..+..
T Consensus 78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~----g~iv~isS~~~~~---------- 143 (253)
T 1hxh_A 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG----GSIINMASVSSWL---------- 143 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC----EEEEEECCGGGTS----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC----CEEEEEcchhhcC----------
Confidence 58999999999998777888999999999999999999999999999998752 7999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccC--CcEEEEEcCCCCCCCChhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD--DIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~--gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++++++++.|++++ ||+||+|+||+++|++....
T Consensus 144 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~ 194 (253)
T 1hxh_A 144 ------------PIEQYA-----------------GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS 194 (253)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH
T ss_pred ------------CCCCCc-----------------cHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhc
Confidence 666666 99999999999999999999988 99999999999999986542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHh---hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALD---GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~---~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. +.. .++ .+.. ..+.+|++.|+|++..+.||+ ++.++++||+.+.+|||++
T Consensus 195 ~~--~~~------------~~~---~~~~~~~~~p~~~~~~~~dvA~~~~~l~----s~~~~~~tG~~~~vdgG~~ 249 (253)
T 1hxh_A 195 LP--KGV------------SKE---MVLHDPKLNRAGRAYMPERIAQLVLFLA----SDESSVMSGSELHADNSIL 249 (253)
T ss_dssp SC--TTC------------CHH---HHBCBTTTBTTCCEECHHHHHHHHHHHH----SGGGTTCCSCEEEESSSCT
T ss_pred cc--hhh------------hHH---HHhhhhccCccCCCCCHHHHHHHHHHHc----CccccCCCCcEEEECCCcc
Confidence 11 000 011 1223 457789999999999999999 9999999999999999965
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=317.21 Aligned_cols=240 Identities=29% Similarity=0.383 Sum_probs=193.4
Q ss_pred HHHHcCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHH
Q 017757 23 YLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAV 102 (366)
Q Consensus 23 ~~~~~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v 102 (366)
|.+...+...+++++|+++||||++|||+++|++|+++|++|++++|+.++++ ++.++++|++|++++
T Consensus 7 ~~~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~Dl~d~~~v 74 (253)
T 2nm0_A 7 HHHHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------------GFLAVKCDITDTEQV 74 (253)
T ss_dssp -------------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTSHHHH
T ss_pred ccccCCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------------cceEEEecCCCHHHH
Confidence 44555566678899999999999999999999999999999999999876532 267899999999999
Q ss_pred HHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 103 KTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 103 ~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
++++++ ++++|+||||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 75 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~~~~ 151 (253)
T 2nm0_A 75 EQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK---KGRVVLISSVVGLL 151 (253)
T ss_dssp HHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT---CEEEEEECCCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEEECchhhCC
Confidence 888765 58999999999998777888889999999999999999999999999998865 68999999998875
Q ss_pred ccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||++
T Consensus 152 ----------------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v 192 (253)
T 2nm0_A 152 ----------------------GSAGQA-----------------NYAASKAGLVGFARSLARELGSRNITFNVVAPGFV 192 (253)
T ss_dssp ----------------------CHHHHH-----------------HHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSB
T ss_pred ----------------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcC
Confidence 545555 89999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 259 ETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 259 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
+|++..... ++..+.+....+.++++.|+|++..++||+ ++.+.++||+.+.+|||+
T Consensus 193 ~T~~~~~~~-------------------~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~----s~~~~~~tG~~i~vdGG~ 249 (253)
T 2nm0_A 193 DTDMTKVLT-------------------DEQRANIVSQVPLGRYARPEEIAATVRFLA----SDDASYITGAVIPVDGGL 249 (253)
T ss_dssp CC----------------------------CHHHHHTTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTT
T ss_pred cCcchhhcC-------------------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCcCcEEEECCcc
Confidence 999865321 111233445668899999999999999999 999999999999999997
Q ss_pred H
Q 017757 339 I 339 (366)
Q Consensus 339 ~ 339 (366)
+
T Consensus 250 ~ 250 (253)
T 2nm0_A 250 G 250 (253)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=314.50 Aligned_cols=250 Identities=23% Similarity=0.279 Sum_probs=199.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh--cCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--TGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++... .+.++.++.+|++|++++++++++
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999998888887777321 245788999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc-cccccc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQ----SLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG-QCWTIK 182 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~----~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~-~~~~~~ 182 (366)
++++|+||||||.....++.+. +.++|++++++|+.|+++++++++|.|++++ ++||++||..+ ..
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----g~iv~isS~~~~~~---- 154 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK----GEIVNISSIASGLH---- 154 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCTTSSSS----
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC----CeEEEEeccccccc----
Confidence 5899999999998777777777 9999999999999999999999999998753 79999999987 65
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++
T Consensus 155 ------------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 199 (278)
T 1spx_A 155 ------------------ATPDFP-----------------YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 199 (278)
T ss_dssp ------------------CCTTSH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred ------------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcc
Confidence 556666 899999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhH-HHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSV-LMAFVEVVAAGLIR 340 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~-itG~~i~~dgG~~~ 340 (366)
........+.. ....+..+.+....+.++++.|+|++..+.||+ ++.+.+ +||+.+.+|||++.
T Consensus 200 ~~~~~~~~~~~----------~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~----s~~~~~~~tG~~~~vdgG~~~ 264 (278)
T 1spx_A 200 GSAMGMPEETS----------KKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA----DRKTSSYIIGHQLVVDGGSSL 264 (278)
T ss_dssp ------------------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHH----CHHHHTTCCSCEEEESTTGGG
T ss_pred ccccccCchhh----------hhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHc----CccccCcccCcEEEECCCccc
Confidence 65421100000 001111334445668899999999999999999 888887 99999999999763
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=320.72 Aligned_cols=236 Identities=23% Similarity=0.290 Sum_probs=206.3
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-------HHHHHHHHHhhcCCeEEEEEecCCCHHHH
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-------LEEAKQSIQLATGIEVATYSADVRDFDAV 102 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~v~~~~~Dls~~~~v 102 (366)
+...+++||++|||||++|||+++|++|+++|++|++++|+.++ +++..+++... +.++.++++|++|++++
T Consensus 38 ~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g~~~~~~~~Dv~d~~~v 116 (346)
T 3kvo_A 38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GGKALPCIVDVRDEQQI 116 (346)
T ss_dssp CCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-TCEEEEEECCTTCHHHH
T ss_pred ccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHH
Confidence 34567899999999999999999999999999999999999874 55666666554 67899999999999999
Q ss_pred HHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 103 KTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 103 ~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
++++++ ++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---~g~IV~iSS~~~~~ 193 (346)
T 3kvo_A 117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK---VAHILNISPPLNLN 193 (346)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS---SCEEEEECCCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC---CCEEEEECCHHHcC
Confidence 888775 58999999999998888899999999999999999999999999999999876 68999999998765
Q ss_pred ccccccCccCccccccccccCCC--CCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC
Q 017757 179 WTIKNTNMKGINENKLCESSGKG--HGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP 256 (366)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG 256 (366)
+ .++.. .|++||+|+.+++++++.|++ +||+||+|+||
T Consensus 194 ----------------------~~~~~~~~-----------------~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG 233 (346)
T 3kvo_A 194 ----------------------PVWFKQHC-----------------AYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPK 233 (346)
T ss_dssp ----------------------GGGTSSSH-----------------HHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECS
T ss_pred ----------------------CCCCCCch-----------------HHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCC
Confidence 3 44555 999999999999999999999 89999999999
Q ss_pred C-CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHH
Q 017757 257 D-TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVA 335 (366)
Q Consensus 257 ~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~d 335 (366)
+ ++|++.+.... ..+.+++..|+|++..++||+ ++ ++++||+.+ +|
T Consensus 234 ~~i~T~~~~~~~~---------------------------~~~~~r~~~pedvA~~v~~L~----s~-~~~itG~~i-vd 280 (346)
T 3kvo_A 234 TAIHTAAMDMLGG---------------------------PGIESQCRKVDIIADAAYSIF----QK-PKSFTGNFV-ID 280 (346)
T ss_dssp BCBCCHHHHHHCC-----------------------------CGGGCBCTHHHHHHHHHHH----TS-CTTCCSCEE-EH
T ss_pred CccccHHHHhhcc---------------------------ccccccCCCHHHHHHHHHHHH----hc-CCCCCceEE-EC
Confidence 5 99987654211 113678889999999999999 99 999999998 99
Q ss_pred HHHHHHH
Q 017757 336 AGLIRFV 342 (366)
Q Consensus 336 gG~~~~~ 342 (366)
||+.+-.
T Consensus 281 gg~~~~~ 287 (346)
T 3kvo_A 281 ENILKEE 287 (346)
T ss_dssp HHHHHHT
T ss_pred CcEehhc
Confidence 9988764
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=310.74 Aligned_cols=234 Identities=26% Similarity=0.398 Sum_probs=196.1
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
++...++++|++|||||++|||++++++|+++|++|++++|+.+++++ +..+++|++|++++++++++
T Consensus 7 ~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~D~~~~~~~~~~~~~ 74 (247)
T 1uzm_A 7 EGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDVTDSDAVDRAFTA 74 (247)
T ss_dssp --CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------------SEEEECCTTCHHHHHHHHHH
T ss_pred CcccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------------hcCeeccCCCHHHHHHHHHH
Confidence 445567899999999999999999999999999999999998765432 12488999999999888765
Q ss_pred ----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 75 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~------ 145 (247)
T 1uzm_A 75 VEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK---FGRMIFIGSVSGLW------ 145 (247)
T ss_dssp HHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCCCC--------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCEEEEECCHhhcc------
Confidence 58999999999998777888899999999999999999999999999998865 68999999998876
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.+
T Consensus 146 ----------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 192 (247)
T 1uzm_A 146 ----------------GIGNQA-----------------NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR 192 (247)
T ss_dssp -------------------CCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred ----------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh
Confidence 666666 99999999999999999999999999999999999999765
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. . ++..+.+...++.++++.|+|++..+.||+ ++.+.++||+++.+|||++
T Consensus 193 ~~------------------~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~----s~~~~~~~G~~i~vdgG~~ 244 (247)
T 1uzm_A 193 AL------------------D-ERIQQGALQFIPAKRVGTPAEVAGVVSFLA----SEDASYISGAVIPVDGGMG 244 (247)
T ss_dssp HS------------------C-HHHHHHHGGGCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred hc------------------C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCCcCCEEEECCCcc
Confidence 31 1 223334455678899999999999999999 9999999999999999964
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=314.07 Aligned_cols=241 Identities=17% Similarity=0.192 Sum_probs=207.1
Q ss_pred CcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 32 RIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
.+++++|++|||||+ +|||+++|++|+++|++|++++|+.+ .++..+++....+ .+.++++|++|++++++++++
T Consensus 3 ~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~ 80 (261)
T 2wyu_A 3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG-GALLFRADVTQDEELDALFAGV 80 (261)
T ss_dssp EECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHH
Confidence 356889999999999 99999999999999999999999875 4444555544333 378899999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
++++|++|||||.... .++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~--- 152 (261)
T 2wyu_A 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-----GGGIVTLTYYASEK--- 152 (261)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-----EEEEEEEECGGGTS---
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-----CCEEEEEecccccC---
Confidence 5899999999998763 56778899999999999999999999999999864 47999999988876
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+|+|+
T Consensus 153 -------------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 196 (261)
T 2wyu_A 153 -------------------VVPKYN-----------------VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTV 196 (261)
T ss_dssp -------------------BCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCT
T ss_pred -------------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCc
Confidence 556666 89999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+..... ..++..+.+....+.+|++.|+|++..++||+ ++.+.++||+.+.+|||++
T Consensus 197 ~~~~~~-----------------~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~----s~~~~~~tG~~~~vdgG~~ 253 (261)
T 2wyu_A 197 AARSIP-----------------GFTKMYDRVAQTAPLRRNITQEEVGNLGLFLL----SPLASGITGEVVYVDAGYH 253 (261)
T ss_dssp GGGGCT-----------------THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred hhhhcc-----------------ccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc----ChhhcCCCCCEEEECCCcc
Confidence 754311 12344455666778899999999999999999 9999999999999999976
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-42 Score=315.16 Aligned_cols=235 Identities=25% Similarity=0.294 Sum_probs=201.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++. .++.++++|++|++++++++++ +
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIAVVADVSDPKAVEAVFAEALEEF 78 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC----SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999999999888777665543 4788999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||+....++.+.+.++|++++++|+.++++++++++|+| ++ .++||++||..+.
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~----~g~iv~isS~~~~------------ 141 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE----GGSLVLTGSVAGL------------ 141 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT----TCEEEEECCCTTC------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc----CCEEEEEecchhc------------
Confidence 899999999999877888899999999999999999999999999999 43 4799999998764
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+.+++++++.|++++||+||+|+||+++|++....
T Consensus 142 -----------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--- 190 (263)
T 2a4k_A 142 -----------GAFGLA-----------------HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--- 190 (263)
T ss_dssp -----------CHHHHH-----------------HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---
T ss_pred -----------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc---
Confidence 222334 8999999999999999999999999999999999999976431
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. ++..+.+....+.++++.|+|++..++||+ ++.++++||+.+.+|||++.
T Consensus 191 ---------------~-~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~----s~~~~~~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 191 ---------------P-PWAWEQEVGASPLGRAGRPEEVAQAALFLL----SEESAYITGQALYVDGGRSI 241 (263)
T ss_dssp ---------------C-HHHHHHHHHTSTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTTT
T ss_pred ---------------C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCcCCEEEECCCccc
Confidence 1 233344556678899999999999999999 99999999999999999763
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=314.05 Aligned_cols=230 Identities=21% Similarity=0.215 Sum_probs=199.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++|++|||||++|||+++|++|+++|++|++++|+.+..+ ..++.++++|++|++++++++++
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------DPDIHTVAGDISKPETADRIVREGIER 93 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999876432 23688999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|.|++++ .++||++||..+...
T Consensus 94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~~~~~--------- 161 (260)
T 3un1_A 94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG---SGHIVSITTSLVDQP--------- 161 (260)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCTTTTSC---------
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CcEEEEEechhhccC---------
Confidence 58999999999998888899999999999999999999999999999999876 689999999876530
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
.+.+... .|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus 162 -----------~~~~~~~-----------------~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--- 210 (260)
T 3un1_A 162 -----------MVGMPSA-----------------LASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA--- 210 (260)
T ss_dssp -----------BTTCCCH-----------------HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---
T ss_pred -----------CCCCccH-----------------HHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---
Confidence 0222334 899999999999999999999999999999999999997543
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+..+.+....+.+|++.|+|++..++||. ++.++||+++.+|||++.
T Consensus 211 -------------------~~~~~~~~~~p~~r~~~~~dva~av~~L~------~~~~itG~~i~vdGG~~~ 257 (260)
T 3un1_A 211 -------------------ETHSTLAGLHPVGRMGEIRDVVDAVLYLE------HAGFITGEILHVDGGQNA 257 (260)
T ss_dssp -------------------GGHHHHHTTSTTSSCBCHHHHHHHHHHHH------HCTTCCSCEEEESTTGGG
T ss_pred -------------------HHHHHHhccCCCCCCcCHHHHHHHHHHhc------ccCCCCCcEEEECCCeec
Confidence 11234456678999999999999999995 577999999999999763
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=323.02 Aligned_cols=243 Identities=26% Similarity=0.266 Sum_probs=207.8
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC----------chhHHHHHHHHHhhcCCeEEEEEecCCCHH
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS----------GKKLEEAKQSIQLATGIEVATYSADVRDFD 100 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~----------~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~ 100 (366)
++..++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++... +.++.++.+|++|++
T Consensus 21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~ 99 (322)
T 3qlj_A 21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-GGEAVADGSNVADWD 99 (322)
T ss_dssp -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-TCEEEEECCCTTSHH
T ss_pred hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-CCcEEEEECCCCCHH
Confidence 3446899999999999999999999999999999999998 67778888877655 668999999999999
Q ss_pred HHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEEecC
Q 017757 101 AVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN---GGPASIALMSS 173 (366)
Q Consensus 101 ~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~---~~~g~iv~vsS 173 (366)
++++++++ ++++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++... +..++||++||
T Consensus 100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS 179 (322)
T 3qlj_A 100 QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS 179 (322)
T ss_dssp HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence 99888765 589999999999988888999999999999999999999999999999986532 12379999999
Q ss_pred CccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEE
Q 017757 174 QAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLI 253 (366)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V 253 (366)
..+.. +.++.. .|++||+|+++|+++++.|++++||+||+|
T Consensus 180 ~~~~~----------------------~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~gI~vn~v 220 (322)
T 3qlj_A 180 GAGLQ----------------------GSVGQG-----------------NYSAAKAGIATLTLVGAAEMGRYGVTVNAI 220 (322)
T ss_dssp HHHHH----------------------CBTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred HHHcc----------------------CCCCCc-----------------cHHHHHHHHHHHHHHHHHHhcccCcEEEEe
Confidence 99887 777777 999999999999999999999999999999
Q ss_pred cCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 254 FPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 254 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
+|| +.|++....... ... ......+...|+|++..++||+ |++++|+||+++.
T Consensus 221 ~PG-~~t~~~~~~~~~------------------~~~----~~~~~~~~~~pedva~~v~~L~----s~~~~~itG~~i~ 273 (322)
T 3qlj_A 221 APS-ARTRMTETVFAE------------------MMA----TQDQDFDAMAPENVSPLVVWLG----SAEARDVTGKVFE 273 (322)
T ss_dssp EEC-TTSCCSCCSCCC------------------------------CCTTCGGGTHHHHHHHT----SGGGGGCCSCEEE
T ss_pred cCC-CCCccchhhhhh------------------hhh----ccccccCCCCHHHHHHHHHHHh----CccccCCCCCEEE
Confidence 999 999987543211 000 1112235568999999999999 9999999999999
Q ss_pred HHHHHHH
Q 017757 334 VAAGLIR 340 (366)
Q Consensus 334 ~dgG~~~ 340 (366)
+|||++.
T Consensus 274 vdGG~~~ 280 (322)
T 3qlj_A 274 VEGGKIR 280 (322)
T ss_dssp EETTEEE
T ss_pred ECCCccc
Confidence 9999864
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-41 Score=314.52 Aligned_cols=244 Identities=17% Similarity=0.164 Sum_probs=205.9
Q ss_pred CCCcC-CCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Q 017757 30 PVRIP-IKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 30 ~~~~~-l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~ 106 (366)
...|+ ++||++|||||+ +|||+++|++|+++|++|++++|+.+ .++..+++....+ .+.++++|++|++++++++
T Consensus 13 ~~~m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~ 90 (285)
T 2p91_A 13 EVFMGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLK 90 (285)
T ss_dssp ----CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHH
T ss_pred cchhhccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHH
Confidence 33344 899999999999 99999999999999999999999875 4455555554433 3678999999999998887
Q ss_pred Hh----cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 107 DE----AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 107 ~~----~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
++ ++++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|+++ .++||++||..+..
T Consensus 91 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~g~iv~isS~~~~~ 166 (285)
T 2p91_A 91 KFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR----NGAIVTLSYYGAEK 166 (285)
T ss_dssp HHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS----CCEEEEEECGGGTS
T ss_pred HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc----CCEEEEEccchhcc
Confidence 65 5899999999998754 567788999999999999999999999999999753 48999999988876
Q ss_pred ccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+|
T Consensus 167 ----------------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v 207 (285)
T 2p91_A 167 ----------------------VVPHYN-----------------VMGIAKAALESTVRYLAYDIAKHGHRINAISAGPV 207 (285)
T ss_dssp ----------------------BCTTTT-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred ----------------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcc
Confidence 556666 89999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 259 ETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 259 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
+|++.+... ..++..+.+....+.++++.|+|++..++||+ ++.+.++||+++.+|||+
T Consensus 208 ~t~~~~~~~-----------------~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~----s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 208 KTLAAYSIT-----------------GFHLLMEHTTKVNPFGKPITIEDVGDTAVFLC----SDWARAITGEVVHVDNGY 266 (285)
T ss_dssp CCSCC--CT-----------------THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTG
T ss_pred cCchhhccc-----------------chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CCcccCCCCCEEEECCCc
Confidence 999754311 12344455566678899999999999999999 999999999999999997
Q ss_pred H
Q 017757 339 I 339 (366)
Q Consensus 339 ~ 339 (366)
+
T Consensus 267 ~ 267 (285)
T 2p91_A 267 H 267 (285)
T ss_dssp G
T ss_pred c
Confidence 6
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=312.11 Aligned_cols=241 Identities=25% Similarity=0.311 Sum_probs=201.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
++|++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+++... +.++.++.+|++|.+++++++++ ++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999999999876 77888888777777654 67899999999999999888775 58
Q ss_pred CCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 111 PVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 111 ~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
++|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|+++..+..++||++||.++..
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 172 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL----------- 172 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHH-----------
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhcc-----------
Confidence 99999999998765 778889999999999999999999999999999886444478999999998876
Q ss_pred cccccccccCCCCC-CccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 190 NENKLCESSGKGHG-GYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 190 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+ ... .|++||+|+++|+++++.|++++||+||+|+||+|+|++.....
T Consensus 173 -----------~~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~- 223 (272)
T 4e3z_A 173 -----------GSATQYV-----------------DYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG- 223 (272)
T ss_dssp -----------CCTTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------
T ss_pred -----------CCCCCcc-----------------hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC-
Confidence 444 445 89999999999999999999999999999999999999865411
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
.++..+.+....+.++++.|+|++..++||+ ++.+.++||+++.+|||.
T Consensus 224 -----------------~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~----s~~~~~~tG~~i~vdgG~ 272 (272)
T 4e3z_A 224 -----------------LPDRAREMAPSVPMQRAGMPEEVADAILYLL----SPSASYVTGSILNVSGGR 272 (272)
T ss_dssp ---------------------------CCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTC
T ss_pred -----------------ChHHHHHHhhcCCcCCCcCHHHHHHHHHHHh----CCccccccCCEEeecCCC
Confidence 1233445666778899999999999999999 999999999999999983
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=311.20 Aligned_cols=235 Identities=26% Similarity=0.329 Sum_probs=206.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.. ++.++++|++|++++++++++
T Consensus 2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~ 77 (260)
T 1nff_A 2 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLDVTQPAQWKAAVDTAVT 77 (260)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG----GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----CceEEEecCCCHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999999888777666642 478899999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 78 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--------- 145 (260)
T 1nff_A 78 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG---RGSIINISSIEGLA--------- 145 (260)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CCEEEEEeehhhcC---------
Confidence 58999999999998777888899999999999999999999999999998875 68999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.. .
T Consensus 146 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~- 193 (260)
T 1nff_A 146 -------------GTVACH-----------------GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W- 193 (260)
T ss_dssp -------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-
T ss_pred -------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-
Confidence 666666 99999999999999999999999999999999999999753 1
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. . +++ . ..+.+++..|+|++..+.||+ ++.+.++||+.+.+|||++.
T Consensus 194 ~-~----------------~~~----~-~~~~~~~~~~~dvA~~v~~l~----s~~~~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 194 V-P----------------EDI----F-QTALGRAAEPVEVSNLVVYLA----SDESSYSTGAEFVVDGGTVA 240 (260)
T ss_dssp S-C----------------TTC----S-CCSSSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred c-h----------------hhH----H-hCccCCCCCHHHHHHHHHHHh----CccccCCcCCEEEECCCeec
Confidence 0 0 000 0 346788999999999999999 99999999999999999764
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=313.92 Aligned_cols=239 Identities=16% Similarity=0.136 Sum_probs=207.0
Q ss_pred CCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+++||++|||||+ +|||+++|++|+++|++|++++|+.+ .++..+++....+ .+.++++|++|++++++++++
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHH
Confidence 4789999999999 99999999999999999999999976 4555555554433 378899999999999888765
Q ss_pred -cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 -AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||+... .++.+.+.++|++++++|+.++++++++++|.|++ .++||++||..+..
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~----- 150 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-----GASVLTLSYLGSTK----- 150 (275)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEEECGGGTS-----
T ss_pred HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-----CCEEEEEecchhcC-----
Confidence 5899999999998764 56778999999999999999999999999999964 47999999988876
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+|+|++.
T Consensus 151 -----------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 196 (275)
T 2pd4_A 151 -----------------YMAHYN-----------------VMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLAS 196 (275)
T ss_dssp -----------------BCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred -----------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchh
Confidence 556666 8999999999999999999999999999999999999986
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+... ..++..+.+....+.+|++.|+|++..++||+ ++.+.++||+.+.+|||++
T Consensus 197 ~~~~-----------------~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~----s~~~~~~tG~~~~vdgg~~ 251 (275)
T 2pd4_A 197 SGIA-----------------DFRMILKWNEINAPLRKNVSLEEVGNAGMYLL----SSLSSGVSGEVHFVDAGYH 251 (275)
T ss_dssp GGST-----------------THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred hhcc-----------------ccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHh----CccccCCCCCEEEECCCcc
Confidence 5321 12344455666778899999999999999999 9999999999999999975
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-41 Score=305.40 Aligned_cols=230 Identities=24% Similarity=0.295 Sum_probs=199.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH----hcCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD----EAGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~----~~~~i 112 (366)
+|+++||||++|||++++++|+++|++|++++|+.++ ..+++ + +.++++|++| ++++++++ +++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~i 71 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL----G--AVPLPTDLEK-DDPKGLVKRALEALGGL 71 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH----T--CEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh----C--cEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999999999999999865 22222 2 6788999999 87777665 46899
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~-------------- 134 (239)
T 2ekp_A 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG---WGRVLFIGSVTTFT-------------- 134 (239)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS--------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEECchhhcc--------------
Confidence 9999999998778888999999999999999999999999999998875 68999999998875
Q ss_pred ccccccCCCC--CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 193 KLCESSGKGH--GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 193 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+. ++.. .|++||+|+++++++++.|++++||+||+|+||+++|++......
T Consensus 135 --------~~~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-- 187 (239)
T 2ekp_A 135 --------AGGPVPIP-----------------AYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ-- 187 (239)
T ss_dssp --------CCTTSCCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--
T ss_pred --------CCCCCCCc-----------------cHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc--
Confidence 44 4555 899999999999999999999999999999999999998654210
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++..+.+....+.+|+..|+|++..+.||+ ++.++++||+.+.+|||++
T Consensus 188 --------------~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~----s~~~~~~tG~~~~vdgG~~ 237 (239)
T 2ekp_A 188 --------------N-PELYEPITARIPMGRWARPEEIARVAAVLC----GDEAEYLTGQAVAVDGGFL 237 (239)
T ss_dssp --------------C-HHHHHHHHTTCTTSSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTTT
T ss_pred --------------C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhcCCCCCEEEECCCcc
Confidence 1 233345556678899999999999999999 9999999999999999975
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=311.14 Aligned_cols=238 Identities=25% Similarity=0.325 Sum_probs=195.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
+++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++.+|++|++++++++++ ++
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-GGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999999999988888765 66899999999999999888765 58
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~g~IV~isS~~~~~------------ 145 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR---SGQIINIGSIGALS------------ 145 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTC------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CeEEEEEcCHHHcc------------
Confidence 999999999998888899999999999999999999999999999999876 68999999999887
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.++.. .|++||+|+.+|+++++.|+ + |||||+|+||+|+|++........
T Consensus 146 ----------~~~~~~-----------------~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~ 196 (264)
T 3tfo_A 146 ----------VVPTAA-----------------VYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEE 196 (264)
T ss_dssp ----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC------------
T ss_pred ----------cCCCCh-----------------hHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchh
Confidence 777777 99999999999999999998 5 999999999999999876532110
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
..+. .. ...+..+.|+|++..++||+ ++.+.+++|+.+..++|+...
T Consensus 197 ------------------~~~~-~~-~~~~~~~~pedvA~~v~~l~----s~~~~~~~~~i~i~p~~~~~~ 243 (264)
T 3tfo_A 197 ------------------TMAA-MD-TYRAIALQPADIARAVRQVI----EAPQSVDTTEITIRPTASGNA 243 (264)
T ss_dssp -------------------------------CCCHHHHHHHHHHHH----HSCTTEEEEEEEEEECC----
T ss_pred ------------------HHHH-HH-hhhccCCCHHHHHHHHHHHh----cCCccCccceEEEecCccccc
Confidence 0000 00 01123578999999999999 999999999999999887744
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=306.62 Aligned_cols=254 Identities=23% Similarity=0.333 Sum_probs=213.9
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
+...+++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++....+.++.++.+|++|++++++++++
T Consensus 6 ~~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 85 (265)
T 1h5q_A 6 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ 85 (265)
T ss_dssp CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHH
Confidence 44567899999999999999999999999999999999999877777666777655567899999999999999888765
Q ss_pred ----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|+||||||.....++.+.+.+++++++++|+.++++++++++|.|++++. .++||++||..+..
T Consensus 86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--~~~iv~~sS~~~~~------ 157 (265)
T 1h5q_A 86 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ--KGSIVVTSSMSSQI------ 157 (265)
T ss_dssp HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCGGGTS------
T ss_pred HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCC--CceEEEeCCchhhc------
Confidence 578999999999988888888999999999999999999999999999987642 48999999988764
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.+... .+..+...|++||+|+++++++++.|++++||+||+|+||+++|++..
T Consensus 158 ----------------~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 211 (265)
T 1h5q_A 158 ----------------INQSSL----------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA 211 (265)
T ss_dssp ----------------CCEEET----------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred ----------------cccccc----------cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccc
Confidence 111000 011122389999999999999999999999999999999999999765
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. . ++..+.+....+.+++..++|++..+.||+ ++.+++++|+++.+|||++
T Consensus 212 ~~------------------~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 212 HM------------------D-KKIRDHQASNIPLNRFAQPEEMTGQAILLL----SDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp GS------------------C-HHHHHHHHHTCTTSSCBCGGGGHHHHHHHH----SGGGTTCCSCEEEECTTGG
T ss_pred cc------------------c-hhHHHHHHhcCcccCCCCHHHHHHHHHhhc----cCchhcCcCcEEEecCCEe
Confidence 42 1 223334455678899999999999999999 9999999999999999965
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=312.09 Aligned_cols=239 Identities=14% Similarity=0.131 Sum_probs=205.0
Q ss_pred CCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++|++|||||+ +|||+++|++|+++|++|++++|+. +.++..+++....+ ...++++|++|++++++++++
T Consensus 6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHH
Confidence 3889999999999 9999999999999999999999987 44555555654433 347899999999999888775
Q ss_pred -cCCCcEEEEcCCCCCC----CCccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 -AGPVDVLVVNQGVFVP----GELEV-QSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~----~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|+||||||.... .++.+ .+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~---- 154 (265)
T 1qsg_A 84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-----GSALLTLSYLGAER---- 154 (265)
T ss_dssp TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEEECGGGTS----
T ss_pred HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-----CCEEEEEcchhhcc----
Confidence 5789999999998753 56667 899999999999999999999999999864 47999999988876
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+|+|++
T Consensus 155 ------------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 155 ------------------AIPNYN-----------------VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp ------------------BCTTTT-----------------HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred ------------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 556666 899999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... ..++..+.+....+.++++.|+|++..++||+ ++.+.++||+++.+|||++
T Consensus 200 ~~~~~-----------------~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~----s~~~~~~tG~~~~vdgG~~ 255 (265)
T 1qsg_A 200 ASGIK-----------------DFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC----SDLSAGISGEVVHVDGGFS 255 (265)
T ss_dssp GGGST-----------------THHHHHHHHHHHSTTSSCCCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTGG
T ss_pred hhccc-----------------ccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CchhcCccCCEEEECCCcC
Confidence 64321 12344455566678899999999999999999 9999999999999999976
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=300.87 Aligned_cols=230 Identities=24% Similarity=0.309 Sum_probs=201.4
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecC--CCHHHHHHHHHh
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV--RDFDAVKTALDE 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dl--s~~~~v~~~~~~ 108 (366)
.+.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++......++.++.+|+ ++.+++++++++
T Consensus 8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence 446789999999999999999999999999999999999999999999988876556677777777 999999888765
Q ss_pred ----cCCCcEEEEcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 ----AGPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ----~~~id~vi~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||.. ...++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~----- 159 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE---DASIAFTSSSVGRK----- 159 (247)
T ss_dssp HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS---SEEEEEECCGGGTS-----
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CCeEEEEcchhhcC-----
Confidence 58999999999986 456788899999999999999999999999999998865 68999999999877
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc-CCcEEEEEcCCCCCCCC
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA-DDIHVSLIFPPDTETPG 262 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~-~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+++|+++++.|+++ +||+||+|+||+++|++
T Consensus 160 -----------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~ 205 (247)
T 3i1j_A 160 -----------------GRANWG-----------------AYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM 205 (247)
T ss_dssp -----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH
T ss_pred -----------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc
Confidence 777777 9999999999999999999987 89999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
........ ...+...|+|++..++||+ +++++++|||+|.
T Consensus 206 ~~~~~~~~---------------------------~~~~~~~p~dva~~~~~l~----s~~~~~itG~~i~ 245 (247)
T 3i1j_A 206 RAQAYPDE---------------------------NPLNNPAPEDIMPVYLYLM----GPDSTGINGQALN 245 (247)
T ss_dssp HHHHSTTS---------------------------CGGGSCCGGGGTHHHHHHH----SGGGTTCCSCEEE
T ss_pred chhccccc---------------------------CccCCCCHHHHHHHHHHHh----CchhccccCeeec
Confidence 66532211 1124567999999999999 9999999998764
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=303.81 Aligned_cols=241 Identities=24% Similarity=0.290 Sum_probs=210.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
++|+++||||++|||++++++|+++|++|++++|+.+++++..+++....+.++.++++|++|++++++++++ +++
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3789999999999999999999999999999999998888877776333356789999999999999888765 579
Q ss_pred CcEEEEcCCCCCCCC---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 112 VDVLVVNQGVFVPGE---LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 112 id~vi~nAG~~~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+|+||||||.....+ +.+.+.+++++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~---------- 147 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG---AGVIVNIASVASLV---------- 147 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS----------
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CCEEEEECChhhcc----------
Confidence 999999999876655 78889999999999999999999999999998875 68999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++......
T Consensus 148 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~ 198 (250)
T 2cfc_A 148 ------------AFPGRS-----------------AYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD 198 (250)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT
T ss_pred ------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC
Confidence 666666 999999999999999999999999999999999999998654211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++..+.+....+.++++.++|++..+.||+ ++.+.++||+.+.+|||++
T Consensus 199 -----------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gG~~ 248 (250)
T 2cfc_A 199 -----------------QPELRDQVLARIPQKEIGTAAQVADAVMFLA----GEDATYVNGAALVMDGAYT 248 (250)
T ss_dssp -----------------SHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH----STTCTTCCSCEEEESTTGG
T ss_pred -----------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CchhhcccCCEEEECCcee
Confidence 1233445566678899999999999999999 8889999999999999975
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=306.39 Aligned_cols=245 Identities=26% Similarity=0.321 Sum_probs=189.5
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
...+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|++++++++++
T Consensus 7 ~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeeEEEECCCCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999998888887777654 56789999999999999988875
Q ss_pred ---c-CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ---A-GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ---~-~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
+ +++|+||||||.....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~------ 156 (266)
T 1xq1_A 86 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG---CGNIIFMSSIAGVV------ 156 (266)
T ss_dssp HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---SCEEEEEC------------
T ss_pred HHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEccchhcc------
Confidence 3 7999999999988777888899999999999999999999999999998875 68999999998876
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.+... .|++||++++.++++++.|++++||+||+|+||++.|++.+
T Consensus 157 ----------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 203 (266)
T 1xq1_A 157 ----------------SASVGS-----------------IYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE 203 (266)
T ss_dssp --------------------CC-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----
T ss_pred ----------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhh
Confidence 555566 89999999999999999999999999999999999999865
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... .++..+.+....+.++++.++|++..+.||+ ++.+.++||+++.+|||++
T Consensus 204 ~~~------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 204 AVY------------------DDEFKKVVISRKPLGRFGEPEEVSSLVAFLC----MPAASYITGQTICVDGGLT 256 (266)
T ss_dssp --------------------------------------CCGGGGHHHHHHHT----SGGGTTCCSCEEECCCCEE
T ss_pred hhc------------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCccCcEEEEcCCcc
Confidence 421 1122233344567789999999999999999 9999999999999999965
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=307.99 Aligned_cols=243 Identities=20% Similarity=0.178 Sum_probs=206.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHH---CCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAK---EGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~---~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.++++|++|||||++|||+++|++|++ +|++|++++|+.++++++.+++.... +.++.++++|++|++++++++++
T Consensus 2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 468899999999999999999999999 89999999999999888888886653 56899999999999999988865
Q ss_pred c------CCCc--EEEEcCCCCCC--CCccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc
Q 017757 109 A------GPVD--VLVVNQGVFVP--GELEV-QSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (366)
Q Consensus 109 ~------~~id--~vi~nAG~~~~--~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~ 177 (366)
. +++| +||||||+... .++.+ .+.++|++++++|+.|+++++++++|+|+++. +..++||++||.++.
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~g~iv~isS~~~~ 160 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP-GLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT-TCEEEEEEECCGGGT
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCceEEEEcCchhc
Confidence 3 5788 99999998654 45777 79999999999999999999999999998751 015899999999987
Q ss_pred cccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 178 CWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
. +.++.. .|++||+|+++|+++++.|+.+ |+||+|+||+
T Consensus 161 ~----------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~ 199 (259)
T 1oaa_A 161 Q----------------------PYKGWG-----------------LYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGP 199 (259)
T ss_dssp S----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCS
T ss_pred C----------------------CCCCcc-----------------HHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCC
Confidence 6 666777 9999999999999999999964 9999999999
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHH
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAA 336 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dg 336 (366)
++|++.+...... ..++..+.+...++.+|++.|+|++..++||+ ++ ++|+||+++.+||
T Consensus 200 v~T~~~~~~~~~~--------------~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~----~~-~~~itG~~i~vdg 259 (259)
T 1oaa_A 200 LDNDMQQLARETS--------------KDPELRSKLQKLKSDGALVDCGTSAQKLLGLL----QK-DTFQSGAHVDFYD 259 (259)
T ss_dssp BSSHHHHHHHHHC--------------SCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHH----HH-CCSCTTEEEETTC
T ss_pred cCcchHHHHhhcc--------------CChhHHHHHHHhhhcCCcCCHHHHHHHHHHHH----hh-ccccCCcEEeccC
Confidence 9999866532110 11334455566778999999999999999999 64 6799999988775
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-40 Score=304.52 Aligned_cols=227 Identities=23% Similarity=0.236 Sum_probs=186.0
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
....+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+..+.++++|++|++++++++++
T Consensus 26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 105 (281)
T 4dry_A 26 QGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAV 105 (281)
T ss_dssp --------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999999999998888776566678999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ---AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|+||||||.... .++.+.+.++|++++++|+.|+++++++++|+|++++. ..|+||++||.++..
T Consensus 106 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~-~~g~IV~isS~~~~~------ 178 (281)
T 4dry_A 106 RAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP-RGGRIINNGSISAQT------ 178 (281)
T ss_dssp HHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS-CCEEEEEECCGGGTC------
T ss_pred HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CCcEEEEECCHHhCC------
Confidence 5899999999998755 78889999999999999999999999999999988642 148999999999887
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+
T Consensus 179 ----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 225 (281)
T 4dry_A 179 ----------------PRPNSA-----------------PYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA 225 (281)
T ss_dssp ----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----
T ss_pred ----------------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh
Confidence 777777 99999999999999999999999999999999999999876
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIA 316 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~ 316 (366)
........ .....+.++++.|+|++..++||+
T Consensus 226 ~~~~~~~~--------------------~~~~~~~~~~~~pedvA~~v~fL~ 257 (281)
T 4dry_A 226 RMSTGVLQ--------------------ANGEVAAEPTIPIEHIAEAVVYMA 257 (281)
T ss_dssp ---CEEEC--------------------TTSCEEECCCBCHHHHHHHHHHHH
T ss_pred hhcchhhh--------------------hhhcccccCCCCHHHHHHHHHHHh
Confidence 54321100 012345677888888888999988
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=302.18 Aligned_cols=243 Identities=26% Similarity=0.299 Sum_probs=211.8
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeE-EEEEecCCCHHHHHHHHHh
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEV-ATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v-~~~~~Dls~~~~v~~~~~~ 108 (366)
.+.+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++ .++.+|++|.+++++++++
T Consensus 4 ~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~ 79 (254)
T 2wsb_A 4 RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL----GAAVAARIVADVTDAEAMTAAAAE 79 (254)
T ss_dssp TTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cccceeEEEEecCCHHHHHHHHHH
Confidence 3457789999999999999999999999999999999999988877776665 3356 8899999999999988866
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|+||||||.....++.+.+.+++++++++|+.++++++++++|.|++++ .++||++||..+..
T Consensus 80 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~------- 149 (254)
T 2wsb_A 80 AEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG---AGAIVNLGSMSGTI------- 149 (254)
T ss_dssp HHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS-------
T ss_pred HHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEEecchhcc-------
Confidence 47999999999998777888899999999999999999999999999998876 68999999988765
Q ss_pred ccCccccccccccCCCCCCc--cccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 186 MKGINENKLCESSGKGHGGY--HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.+.. . .|++||+|+++++++++.|++++||+||+|+||++.|++.
T Consensus 150 ---------------~~~~~~~~-----------------~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~ 197 (254)
T 2wsb_A 150 ---------------VNRPQFAS-----------------SYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMT 197 (254)
T ss_dssp ---------------CCSSSCBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHH
T ss_pred ---------------CCCCCcch-----------------HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhh
Confidence 44444 4 8999999999999999999999999999999999999976
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+.... . ++..+.+....+.+++..|+|++..+.||+ ++.+.++||+++.+|||++
T Consensus 198 ~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gG~~ 252 (254)
T 2wsb_A 198 LKMRE----------------R-PELFETWLDMTPMGRCGEPSEIAAAALFLA----SPAASYVTGAILAVDGGYT 252 (254)
T ss_dssp HHHHT----------------C-HHHHHHHHHTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred hcccc----------------C-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CcccccccCCEEEECCCEe
Confidence 54321 1 233445556678889999999999999999 8889999999999999965
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=307.50 Aligned_cols=237 Identities=24% Similarity=0.318 Sum_probs=204.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|++|||||++|||+++|++|+++|++|++++|+.++ +.++.++++|++|++++++++++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFKE 71 (264)
T ss_dssp GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 45889999999999999999999999999999999998764 34678899999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|+||||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~---------- 138 (264)
T 2dtx_A 72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR---DPSIVNISSVQASI---------- 138 (264)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS---SCEEEEECCGGGTS----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---CcEEEEECCchhcc----------
Confidence 58999999999998778888999999999999999999999999999998765 68999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++|+++++.|++++ |+||+|+||+++|++......
T Consensus 139 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~ 188 (264)
T 2dtx_A 139 ------------ITKNAS-----------------AYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAE 188 (264)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHH
T ss_pred ------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhh
Confidence 666666 99999999999999999999998 999999999999998654311
Q ss_pred cCCcchhhhhccCCCCCH---HHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKA---DEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~---~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. . ...+ ++..+.+....+.+|++.|+|++..++||+ ++.++++||+.+.+|||++
T Consensus 189 ~~------~-----~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~----s~~~~~~tG~~i~vdGG~~ 247 (264)
T 2dtx_A 189 LE------V-----GSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLA----SREASFITGTCLYVDGGLS 247 (264)
T ss_dssp HH------H-----CSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred cc------c-----ccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCCCcEEEECCCcc
Confidence 00 0 0011 133344555678899999999999999999 9999999999999999975
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=298.57 Aligned_cols=229 Identities=29% Similarity=0.388 Sum_probs=196.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-GAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4588999999999999999999999999999999999999888888887654 56789999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ ++||++||.++..
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----g~iv~isS~~~~~---------- 147 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK----GTVVQMSSIAGRV---------- 147 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCGGGTC----------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC----CEEEEEccHHhcC----------
Confidence 58999999999998778888999999999999999999999999999998753 7999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|+++++.|++++||+||+|+||+++|++.....
T Consensus 148 ------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~- 197 (247)
T 2jah_A 148 ------------NVRNAA-----------------VYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT- 197 (247)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC-
T ss_pred ------------CCCCCc-----------------HHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc-
Confidence 666667 99999999999999999999999999999999999999865321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCe--EeeCCchhHHHHHHhcCCCCchhHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSF--IVPCNSEGFLLSIATAGLSPQRSVLMA 329 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~--~~~~~v~~~~~~L~~~~~s~~~~~itG 329 (366)
. ++. +......+ +++ +.|+|++..++||+ ++.+.++++
T Consensus 198 ----------------~-~~~-~~~~~~~~-~~~~~~~pedvA~~v~~l~----s~~~~~~~~ 237 (247)
T 2jah_A 198 ----------------H-TAT-KEMYEQRI-SQIRKLQAQDIAEAVRYAV----TAPHHATVH 237 (247)
T ss_dssp ----------------C-HHH-HHHHHHHT-TTSCCBCHHHHHHHHHHHH----HSCTTEEEE
T ss_pred ----------------c-hhh-HHHHHhcc-cccCCCCHHHHHHHHHHHh----CCCccCccc
Confidence 1 111 11222334 666 89999999999999 776666554
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-40 Score=301.38 Aligned_cols=245 Identities=23% Similarity=0.305 Sum_probs=213.1
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++++|++|||||++|||++++++|+++|++|++++|+.+++++..++++.. +.++.++++|++|++++++++++
T Consensus 7 ~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 7 EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-GHDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp GGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999999998888777777654 56799999999999999888765
Q ss_pred --cCCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 --AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 --~~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|+||||||... ..++.+.+.+++++++++|+.++++++++++|.|++++ .++||++||.++..
T Consensus 86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~------- 155 (260)
T 3awd_A 86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK---QGVIVAIGSMSGLI------- 155 (260)
T ss_dssp HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS-------
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC---CCEEEEEecchhcc-------
Confidence 579999999999876 56778889999999999999999999999999998765 68999999998765
Q ss_pred ccCccccccccccCCCCCCc--cccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 186 MKGINENKLCESSGKGHGGY--HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.+.. . .|++||+|++.++++++.|++++||+||+|+||+++|++.
T Consensus 156 ---------------~~~~~~~~-----------------~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~ 203 (260)
T 3awd_A 156 ---------------VNRPQQQA-----------------AYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLT 203 (260)
T ss_dssp ---------------CCSSSCCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred ---------------cCCCCCcc-----------------ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchh
Confidence 43433 4 8999999999999999999999999999999999999987
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... . ++..+.+....+.++++.++|++..+.||+ ++.+.+++|+.+.+|||++
T Consensus 204 ~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gg~~ 258 (260)
T 3awd_A 204 RFGME----------------K-PELYDAWIAGTPMGRVGQPDEVASVVQFLA----SDAASLMTGAIVNVDAGFT 258 (260)
T ss_dssp HHHHT----------------C-HHHHHHHHHTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred hcccC----------------C-hHHHHHHHhcCCcCCCCCHHHHHHHHHHHh----CchhccCCCcEEEECCcee
Confidence 62110 1 233445556678899999999999999999 8888999999999999964
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-40 Score=302.44 Aligned_cols=245 Identities=24% Similarity=0.251 Sum_probs=212.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..++++|++|||||++|||++++++|+++|++|++++| +.+++++..+++... +.++.++.+|++|++++++++++
T Consensus 2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999 777777777777543 56789999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||.....++.+.+.+++++++++|+.++++++++++|.|++++. .++||++||..+..
T Consensus 81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--~~~iv~isS~~~~~-------- 150 (261)
T 1gee_A 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI--KGTVINMSSVHEKI-------- 150 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--CCEEEEECCGGGTS--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC--CCEEEEeCCHHhcC--------
Confidence 579999999999987778888999999999999999999999999999987531 47999999988776
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.+... .|++||+|++.++++++.|++++||+||+|+||+++|++....
T Consensus 151 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 199 (261)
T 1gee_A 151 --------------PWPLFV-----------------HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK 199 (261)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH
T ss_pred --------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc
Confidence 666666 9999999999999999999999999999999999999987643
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. . ++..+.+....+.+++..|+|++..++||+ ++.+.+++|+++.+|||++
T Consensus 200 ~~----------------~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 200 FA----------------D-PEQRADVESMIPMGYIGEPEEIAAVAAWLA----SSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HH----------------S-HHHHHHHHTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred cc----------------C-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CccccCCCCcEEEEcCCcc
Confidence 21 1 222334455667889999999999999999 8889999999999999975
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=301.01 Aligned_cols=241 Identities=22% Similarity=0.266 Sum_probs=209.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
++++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++. .+.++.+|++|+++++++++++++
T Consensus 2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~ 76 (244)
T 3d3w_A 2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALGSVGP 76 (244)
T ss_dssp CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHTTCCC
T ss_pred ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-----CCCEEEEeCCCHHHHHHHHHHcCC
Confidence 567899999999999999999999999999999999999887776655442 345679999999999999998889
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||.....++.+.+.+++++++++|+.+++++++++.|.|++++. .++||++||..+..
T Consensus 77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~------------- 141 (244)
T 3d3w_A 77 VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV--PGAIVNVSSQCSQR------------- 141 (244)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCGGGTS-------------
T ss_pred CCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CcEEEEeCchhhcc-------------
Confidence 999999999887777888999999999999999999999999999987531 47999999998876
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||++.|++......
T Consensus 142 ---------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~--- 192 (244)
T 3d3w_A 142 ---------AVTNHS-----------------VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS--- 192 (244)
T ss_dssp ---------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC---
T ss_pred ---------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhcc---
Confidence 556666 999999999999999999999999999999999999998664211
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.++..+.+....+.+++..++|++..+.||+ ++.+.+++|+.+.+|||++
T Consensus 193 --------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gG~~ 242 (244)
T 3d3w_A 193 --------------DPHKAKTMLNRIPLGKFAEVEHVVNAILFLL----SDRSGMTTGSTLPVEGGFW 242 (244)
T ss_dssp --------------STTHHHHHHHTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred --------------ChHHHHHHHhhCCCCCCcCHHHHHHHHHHHc----CccccCCCCCEEEECCCcc
Confidence 0112234455678899999999999999999 8888899999999999975
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=306.05 Aligned_cols=219 Identities=21% Similarity=0.247 Sum_probs=194.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+++++|++|||||++|||+++|++|+++|++|++++|+.+ +|++|++++++++++++++
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~g~i 60 (223)
T 3uce_A 2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDISDEKSVYHYFETIGAF 60 (223)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCTTCHHHHHHHHHHHCSE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCCCCHHHHHHHHHHhCCC
Confidence 5688999999999999999999999999999999999764 7999999999999999999
Q ss_pred cEEEEcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 113 DVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 113 d~vi~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
|++|||||.. ...++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 61 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~------------- 122 (223)
T 3uce_A 61 DHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-----GGSITLTSGMLSRK------------- 122 (223)
T ss_dssp EEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-----EEEEEEECCGGGTS-------------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-----CeEEEEecchhhcc-------------
Confidence 9999999987 5678889999999999999999999999999999976 47999999999877
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|++||+|+++|+++++.|+++ ||||+|+||+++|++.+.....
T Consensus 123 ---------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~-- 172 (223)
T 3uce_A 123 ---------VVANTY-----------------VKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNAD-- 172 (223)
T ss_dssp ---------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHH--
T ss_pred ---------CCCCch-----------------HHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchh--
Confidence 667777 9999999999999999999987 9999999999999987643211
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..++..+.+....+.+|++.|+|++..++||+ + +.++||+++.+|||++
T Consensus 173 -------------~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~----~--~~~~tG~~i~vdgG~~ 221 (223)
T 3uce_A 173 -------------DRDAMYQRTQSHLPVGKVGEASDIAMAYLFAI----Q--NSYMTGTVIDVDGGAL 221 (223)
T ss_dssp -------------HHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH----H--CTTCCSCEEEESTTGG
T ss_pred -------------hHHHHHHHHhhcCCCCCccCHHHHHHHHHHHc----c--CCCCCCcEEEecCCee
Confidence 13445566777889999999999999999999 5 5799999999999975
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=308.18 Aligned_cols=243 Identities=21% Similarity=0.289 Sum_probs=211.4
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++... +.++.++.+|++|++++++++++
T Consensus 38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCceeEEECCCCCHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999988888887777654 56789999999999999988765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||.....++.+.+.+++++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus 117 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~-------- 185 (285)
T 2c07_A 117 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR---YGRIINISSIVGLT-------- 185 (285)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT---CEEEEEECCTHHHH--------
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CCEEEEECChhhcc--------
Confidence 58999999999998778888899999999999999999999999999998765 68999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|++.++++++.|+++.||+||+|+||.++|++....
T Consensus 186 --------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 234 (285)
T 2c07_A 186 --------------GNVGQA-----------------NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI 234 (285)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C
T ss_pred --------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc
Confidence 666666 9999999999999999999999999999999999999975431
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++..+.+....+.+++..++|++..++||+ ++.+.++||+.+.+|||++
T Consensus 235 ------------------~-~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~----~~~~~~~~G~~i~v~gG~~ 284 (285)
T 2c07_A 235 ------------------S-EQIKKNIISNIPAGRMGTPEEVANLACFLS----SDKSGYINGRVFVIDGGLS 284 (285)
T ss_dssp ------------------C-HHHHHHHHTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSC
T ss_pred ------------------C-HHHHHHHHhhCCCCCCCCHHHHHHHHHHHh----CCCcCCCCCCEEEeCCCcc
Confidence 1 233344556678899999999999999999 9999999999999999964
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-40 Score=303.33 Aligned_cols=227 Identities=26% Similarity=0.360 Sum_probs=191.4
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
+..++++|++|||||++|||+++|++|+++|++|++++|+.+++++. ...++.++++|++|.+++++++++
T Consensus 10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (266)
T 3p19_A 10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------NLPNTLCAQVDVTDKYTFDTAITRAE 82 (266)
T ss_dssp -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-------CCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-------hcCCceEEEecCCCHHHHHHHHHHHH
Confidence 45568899999999999999999999999999999999997765432 133688999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++..
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~g~IV~isS~~~~~-------- 151 (266)
T 3p19_A 83 KIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN---CGTIINISSIAGKK-------- 151 (266)
T ss_dssp HHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCGGGTS--------
T ss_pred HHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CcEEEEEcChhhCC--------
Confidence 58999999999998888899999999999999999999999999999999876 68999999999887
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus 152 --------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 200 (266)
T 3p19_A 152 --------------TFPDHA-----------------AYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHT 200 (266)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred --------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcc
Confidence 777777 9999999999999999999999999999999999999987642
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHh-hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALD-GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLM 328 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~it 328 (366)
. .++..+.... ..+.+|++.|+|++..++||+ +....+++
T Consensus 201 ~------------------~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~----~~~~~~~~ 241 (266)
T 3p19_A 201 T------------------SQQIKDGYDAWRVDMGGVLAADDVARAVLFAY----QQPQNVCI 241 (266)
T ss_dssp S------------------CHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHH----HSCTTEEE
T ss_pred c------------------chhhhHHHHhhcccccCCCCHHHHHHHHHHHH----cCCCCccc
Confidence 1 1222222222 458899999999999999999 55554433
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=308.03 Aligned_cols=240 Identities=20% Similarity=0.259 Sum_probs=207.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++++|++|.+++++++++
T Consensus 25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~ 100 (281)
T 3ppi_A 25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVSTNVTSEDSVLAAIEAANQ 100 (281)
T ss_dssp CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHTT
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999998888877766 55789999999999999988875
Q ss_pred cCCCcEEEEc-CCCCCCCCc-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEEecCCccccc
Q 017757 109 AGPVDVLVVN-QGVFVPGEL-----EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN---GGPASIALMSSQAGQCW 179 (366)
Q Consensus 109 ~~~id~vi~n-AG~~~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~---~~~g~iv~vsS~~~~~~ 179 (366)
++++|++||| ||......+ .+.+.++|++++++|+.+++++++.++|.|.+... +..++||++||.++..
T Consensus 101 ~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~- 179 (281)
T 3ppi_A 101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE- 179 (281)
T ss_dssp SSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS-
T ss_pred hCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC-
Confidence 4789999999 665544443 36899999999999999999999999999987321 2368999999999887
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+
T Consensus 180 ---------------------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 221 (281)
T 3ppi_A 180 ---------------------GQIGQT-----------------AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMK 221 (281)
T ss_dssp ---------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred ---------------------CCCCCc-----------------ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCC
Confidence 777777 999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhC-CCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 260 TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKS-GSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 260 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~-gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
|++.+.. .++..+.+...++. +++..|+|++..++||+ ++ .++||+++.+|||+
T Consensus 222 T~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~----s~--~~~tG~~i~vdGG~ 276 (281)
T 3ppi_A 222 TPIMESV-------------------GEEALAKFAANIPFPKRLGTPDEFADAAAFLL----TN--GYINGEVMRLDGAQ 276 (281)
T ss_dssp CHHHHTT-------------------CHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHH----HC--SSCCSCEEEESTTC
T ss_pred chhhhcc-------------------cHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH----cC--CCcCCcEEEECCCc
Confidence 9987642 13444556667777 89999999999999999 53 69999999999996
Q ss_pred H
Q 017757 339 I 339 (366)
Q Consensus 339 ~ 339 (366)
+
T Consensus 277 ~ 277 (281)
T 3ppi_A 277 R 277 (281)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=303.79 Aligned_cols=231 Identities=16% Similarity=0.170 Sum_probs=193.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-e--cCchhHHHHHHHHHhhcCCeEEEEEecCCCHHH-HHHHHHhcCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSIL-A--RSGKKLEEAKQSIQLATGIEVATYSADVRDFDA-VKTALDEAGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~--r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~-v~~~~~~~~~i 112 (366)
||++|||||++|||+++|++|+++|++|+++ + |+.+++++..+++ .+.++. |..+.+. ++++.++++++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~---~~~~~~----~~~~v~~~~~~~~~~~g~i 73 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN---PGTIAL----AEQKPERLVDATLQHGEAI 73 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS---TTEEEC----CCCCGGGHHHHHGGGSSCE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh---CCCccc----CHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999999999 6 9988887776665 122221 3333222 33444557899
Q ss_pred cEEEEcCCCCCC---CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 113 DVLVVNQGVFVP---GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 113 d~vi~nAG~~~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
|+||||||.... .++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~~~~----------- 139 (244)
T 1zmo_A 74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG---GASVIFITSSVGKK----------- 139 (244)
T ss_dssp EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCGGGTS-----------
T ss_pred CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEECChhhCC-----------
Confidence 999999998877 7888999999999999999999999999999998865 68999999998876
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh---hhh
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL---EEE 266 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~---~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++. ...
T Consensus 140 -----------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~ 191 (244)
T 1zmo_A 140 -----------PLAYNP-----------------LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDW 191 (244)
T ss_dssp -----------CCTTCT-----------------THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHH
T ss_pred -----------CCCCch-----------------HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccc
Confidence 666667 9999999999999999999999999999999999999987 432
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHh-hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALD-GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
.. ++..+.+.. .++.+|++.|+|++..+.||+ ++.++++||+.+.+|||+
T Consensus 192 ~~------------------~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~----s~~~~~~tG~~i~vdgG~ 242 (244)
T 1zmo_A 192 EN------------------NPELRERVDRDVPLGRLGRPDEMGALITFLA----SRRAAPIVGQFFAFTGGY 242 (244)
T ss_dssp HH------------------CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHH----TTTTGGGTTCEEEESTTC
T ss_pred cc------------------hHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc----CccccCccCCEEEeCCCC
Confidence 11 112233444 578899999999999999999 999999999999999995
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=303.60 Aligned_cols=235 Identities=24% Similarity=0.281 Sum_probs=200.2
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+++....++||++|||||++|||+++|++|+++|++|++++|+.+.++ ++ + ++.++ +|+ .++++++++
T Consensus 10 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~----~-~~~~~-~D~--~~~~~~~~~ 77 (249)
T 1o5i_A 10 HHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS----G-HRYVV-CDL--RKDLDLLFE 77 (249)
T ss_dssp ------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT----C-SEEEE-CCT--TTCHHHHHH
T ss_pred hhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh----C-CeEEE-eeH--HHHHHHHHH
Confidence 456677899999999999999999999999999999999999873322 22 2 56667 999 567888888
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
+..++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||..+..
T Consensus 78 ~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--------- 145 (249)
T 1o5i_A 78 KVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG---WGRIVAITSFSVIS--------- 145 (249)
T ss_dssp HSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS---------
T ss_pred HhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEEcchHhcC---------
Confidence 887899999999988777888999999999999999999999999999999875 68999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.....
T Consensus 146 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~ 195 (249)
T 1o5i_A 146 -------------PIENLY-----------------TSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL 195 (249)
T ss_dssp -------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS
T ss_pred -------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc
Confidence 666666 99999999999999999999999999999999999999875421
Q ss_pred hcCCcchhhhhccCCCCCHHHHHH-HHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAK-KALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~-~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
++..+ .+....+.++++.|+|++..++||+ ++.+.++||+.+.+|||++
T Consensus 196 -------------------~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~----s~~~~~~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 196 -------------------SEEKKKQVESQIPMRRMAKPEEIASVVAFLC----SEKASYLTGQTIVVDGGLS 245 (249)
T ss_dssp -------------------CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTCC
T ss_pred -------------------hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CccccCCCCCEEEECCCcc
Confidence 11222 4455678899999999999999999 9999999999999999964
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-40 Score=297.16 Aligned_cols=216 Identities=21% Similarity=0.394 Sum_probs=176.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
|++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++. .++.++++|++|++++++++++ ++
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----NAVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999999998888877763 2689999999999999888765 58
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||.....++.+.+.++|++++++|+.|+++++++++|+|++++ ++||++||.++..
T Consensus 77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~iv~isS~~~~~------------ 140 (235)
T 3l6e_A 77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG----GVLANVLSSAAQV------------ 140 (235)
T ss_dssp SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC----EEEEEECCEECCS------------
T ss_pred CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC----CEEEEEeCHHhcC------------
Confidence 999999999998888888999999999999999999999999999998753 5999999999887
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++......
T Consensus 141 ----------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-- 191 (235)
T 3l6e_A 141 ----------GKANES-----------------LYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-- 191 (235)
T ss_dssp ----------SCSSHH-----------------HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------
T ss_pred ----------CCCCCc-----------------HHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC--
Confidence 777777 999999999999999999999999999999999999998654311
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCC-CchhHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLS-PQRSVLMA 329 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s-~~~~~itG 329 (366)
.+.+++..|+|++..++||+ + +.+.+++|
T Consensus 192 --------------------------~~~~~~~~pedvA~~v~~l~----~~~~~~~i~~ 221 (235)
T 3l6e_A 192 --------------------------VDPSGFMTPEDAAAYMLDAL----EARSSCHVTD 221 (235)
T ss_dssp -------------------------------CBCHHHHHHHHHHHT----CCCSSEEEEE
T ss_pred --------------------------CCCcCCCCHHHHHHHHHHHH----hCCCCcceee
Confidence 11235667777777777777 4 55555544
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=299.34 Aligned_cols=242 Identities=25% Similarity=0.342 Sum_probs=212.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++....+.++.++.+|++|++++++++++
T Consensus 2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999998888887777654466899999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||.....++.+.+.+++++++++|+.++++++++++|.|++++ .++||++||..+..
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~--------- 149 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR---WGRIVNISSVVGFT--------- 149 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT---CEEEEEECCHHHHH---------
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC---CcEEEEEccHHhcC---------
Confidence 57999999999988777888899999999999999999999999999998865 68999999988766
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+++++++++++.|+.+.||+||+|+||+++|++....
T Consensus 150 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~- 198 (248)
T 2pnf_A 150 -------------GNVGQV-----------------NYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL- 198 (248)
T ss_dssp -------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-
T ss_pred -------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-
Confidence 555666 8999999999999999999999999999999999999976431
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
. ++..+.+....+.+++..++|++..+.||+ ++.+.+++|+++.+|||+
T Consensus 199 -----------------~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 199 -----------------S-EEIKQKYKEQIPLGRFGSPEEVANVVLFLC----SELASYITGEVIHVNGGM 247 (248)
T ss_dssp -----------------C-HHHHHHHHHTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTC
T ss_pred -----------------c-HHHHHHHHhcCCCCCccCHHHHHHHHHHHh----CchhhcCCCcEEEeCCCc
Confidence 1 223334445567789999999999999999 888899999999999985
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-40 Score=301.12 Aligned_cols=241 Identities=21% Similarity=0.153 Sum_probs=194.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-----
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----- 108 (366)
+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|++++++++++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GGQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999999999999999888888887655 56889999999999999888765
Q ss_pred cCCCcEEEEcCC--CC-----CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 109 AGPVDVLVVNQG--VF-----VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 109 ~~~id~vi~nAG--~~-----~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
++++|++||||| +. ...++.+.+.++|++++++|+.+++++++.++|+|++++ .++||++||..+..
T Consensus 81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--- 154 (260)
T 2qq5_A 81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG---QGLIVVISSPGSLQ--- 154 (260)
T ss_dssp TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT---CCEEEEECCGGGTS---
T ss_pred CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC---CcEEEEEcChhhcC---
Confidence 689999999995 32 345677889999999999999999999999999998765 68999999988764
Q ss_pred cccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+. ... .|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus 155 -------------------~~-~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 197 (260)
T 2qq5_A 155 -------------------YM-FNV-----------------PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTE 197 (260)
T ss_dssp -------------------CC-SSH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTT
T ss_pred -------------------CC-CCC-----------------chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccH
Confidence 22 234 89999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCch-hHHHHHHHHHHH
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQR-SVLMAFVEVVAA 336 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~-~~itG~~i~~dg 336 (366)
+.......... ..+...+. ...+.++...|+|++..++||+ ++.+ .|+||+.+.+|+
T Consensus 198 ~~~~~~~~~~~------------~~~~~~~~--~~~~~~~~~~pe~va~~v~~l~----s~~~~~~itG~~i~~~~ 255 (260)
T 2qq5_A 198 LLKEHMAKEEV------------LQDPVLKQ--FKSAFSSAETTELSGKCVVALA----TDPNILSLSGKVLPSCD 255 (260)
T ss_dssp TC------------------------------------CHHHHHHHHHHHHHHHH----TCTTGGGGTTCEEEHHH
T ss_pred HHHHhhccccc------------cchhHHHH--HHhhhccCCCHHHHHHHHHHHh----cCcccccccceeechhh
Confidence 86542111000 00000000 0124566789999999999999 8886 599999999875
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-40 Score=303.78 Aligned_cols=240 Identities=24% Similarity=0.247 Sum_probs=207.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++... +.++.++.+|++|++++++++++
T Consensus 30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-GVHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-CSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999988877776666543 56789999999999999888765
Q ss_pred cCCCcEEEEcCCCCCC-CCcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 AGPVDVLVVNQGVFVP-GELE-VQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~-~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||.... .++. +.+.+++++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus 109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~-------- 177 (279)
T 3ctm_A 109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG---KGSLIITSSISGKI-------- 177 (279)
T ss_dssp HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCCTTSC--------
T ss_pred hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCeEEEECchHhcc--------
Confidence 5789999999998766 6666 788999999999999999999999999998865 68999999998765
Q ss_pred cCccccccccccCCC--CCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 187 KGINENKLCESSGKG--HGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+ .+... .|++||+|+++++++++.|++++| +||+|+||+++|++..
T Consensus 178 --------------~~~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~ 225 (279)
T 3ctm_A 178 --------------VNIPQLQA-----------------PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD 225 (279)
T ss_dssp --------------C---CCHH-----------------HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred --------------CCCCCCcc-----------------cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence 4 44555 899999999999999999999999 9999999999999763
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. .. ++..+.+....+.+++..|+|++..+.||+ ++.+.++||+++.+|||++
T Consensus 226 ~------------------~~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~----s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 226 F------------------AS-KDMKAKWWQLTPLGREGLTQELVGGYLYLA----SNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp S------------------CC-HHHHHHHHHHSTTCSCBCGGGTHHHHHHHH----SGGGTTCCSCEEEESTTCC
T ss_pred c------------------cC-hHHHHHHHHhCCccCCcCHHHHHHHHHHHh----CccccCccCCEEEECCCee
Confidence 2 01 333344556678899999999999999999 9999999999999999964
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=300.42 Aligned_cols=242 Identities=27% Similarity=0.322 Sum_probs=208.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... .++.++.+|++|++++++++++
T Consensus 2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (251)
T 1zk4_A 2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999988877776666432 5788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|+||||||.....++.+.+.++|++++++|+.+++++++.++|.|++++. .++||++||..+..
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~---------- 147 (251)
T 1zk4_A 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL--GASIINMSSIEGFV---------- 147 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS--CEEEEEECCGGGTS----------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC--CCEEEEeCCchhcc----------
Confidence 578999999999987778888999999999999999999999999999987651 27999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc--cCCcEEEEEcCCCCCCCChhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||++++.++++++.|+. +.||+||+|+||+++|++.+..
T Consensus 148 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~ 198 (251)
T 1zk4_A 148 ------------GDPSLG-----------------AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198 (251)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS
T ss_pred ------------CCCCCc-----------------cchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc
Confidence 666666 999999999999999999998 8899999999999999976532
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++.....+....+.+++..++|++..+.||+ ++.+.++||+.+.+|||++
T Consensus 199 ~------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 199 P------------------GAEEAMSQRTKTPMGHIGEPNDIAYICVYLA----SNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp T------------------THHHHHTSTTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred C------------------chhhhHHHhhcCCCCCCcCHHHHHHHHHHHc----CcccccccCcEEEECCCcc
Confidence 1 1222222334457789999999999999999 8889999999999999975
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=300.90 Aligned_cols=241 Identities=24% Similarity=0.344 Sum_probs=190.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
|++++|++|||||++|||++++++|+++|++|+++ +|+++.+++..+++... +.++.++.+|++|++++++++++
T Consensus 1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-GINVVVAKGDVKNPEDVENMVKTAMD 79 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT-TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999998 67777777777777543 56789999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||.....++.+.+.+++++.+++|+.++++++++++|.|++++ .++||++||..+..
T Consensus 80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~--------- 147 (247)
T 2hq1_A 80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK---SGKIINITSIAGII--------- 147 (247)
T ss_dssp HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT---CEEEEEECC--------------
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEcChhhcc---------
Confidence 57999999999988777778889999999999999999999999999998765 68999999988766
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.+... .|++||+|++.++++++.|++++||+||+|+||+++|++....
T Consensus 148 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~- 196 (247)
T 2hq1_A 148 -------------GNAGQA-----------------NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL- 196 (247)
T ss_dssp -----------------CH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-
T ss_pred -------------CCCCCc-----------------HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc-
Confidence 555666 8999999999999999999999999999999999999865421
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+++..+.+....+.++++.++|++..+.||+ ++.+.+++|+++.+|||++
T Consensus 197 ------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gG~~ 246 (247)
T 2hq1_A 197 ------------------PDKVKEMYLNNIPLKRFGTPEEVANVVGFLA----SDDSNYITGQVINIDGGLV 246 (247)
T ss_dssp ------------------CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTC-
T ss_pred ------------------chHHHHHHHhhCCCCCCCCHHHHHHHHHHHc----CcccccccCcEEEeCCCcc
Confidence 1233445556677889999999999999999 8888999999999999965
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=296.75 Aligned_cols=230 Identities=27% Similarity=0.329 Sum_probs=192.1
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
..+.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++.+|++|++++++++++
T Consensus 22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-GGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred chhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHH
Confidence 3345689999999999999999999999999999999999999999888888755 67899999999999999888765
Q ss_pred ---cCCCcEEEEcCCC-CCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ---AGPVDVLVVNQGV-FVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ---~~~id~vi~nAG~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|+||||||. ....++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 101 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~------ 171 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK---RGHIINISSLAGKN------ 171 (262)
T ss_dssp HHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CCEEEEECSSCSSC------
T ss_pred HHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CceEEEEechhhcC------
Confidence 5899999999998 4557788899999999999999999999999999998876 68999999999887
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus 172 ----------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 218 (262)
T 3rkr_A 172 ----------------PVADGA-----------------AYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV 218 (262)
T ss_dssp ----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred ----------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc
Confidence 777777 99999999999999999999999999999999999999865
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
.... ..+.++.+.|+|++..+.||+ ++.+.+++|+.+.
T Consensus 219 ~~~~---------------------------~~~~~~~~~p~dvA~~v~~l~----s~~~~~~~g~~~i 256 (262)
T 3rkr_A 219 GLSA---------------------------KKSALGAIEPDDIADVVALLA----TQADQSFISEVLV 256 (262)
T ss_dssp -------------------------------------CCCHHHHHHHHHHHH----TCCTTCCEEEEEE
T ss_pred cccc---------------------------ccccccCCCHHHHHHHHHHHh----cCccccccCcEEe
Confidence 4211 123456778899999999999 8888877776543
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-39 Score=297.43 Aligned_cols=220 Identities=23% Similarity=0.273 Sum_probs=176.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|++++++++++
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----GDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp ----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999998888877766 35788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||+..+ .++.+.+.++|++++++|+.|+++++++++|.|++++. ..++||++||..+..
T Consensus 100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~-~~g~IV~isS~~~~~--------- 169 (272)
T 4dyv_A 100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP-RGGRIINNGSISATS--------- 169 (272)
T ss_dssp HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS-CCEEEEEECCSSTTS---------
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC-CCcEEEEECchhhcC---------
Confidence 5899999999998765 67889999999999999999999999999999988642 147999999999887
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus 170 -------------~~~~~~-----------------~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 219 (272)
T 4dyv_A 170 -------------PRPYSA-----------------PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK 219 (272)
T ss_dssp -------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------
T ss_pred -------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc
Confidence 777777 99999999999999999999999999999999999999876532
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIA 316 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~ 316 (366)
... .......+.++++.|+|++..++||+
T Consensus 220 ~~~--------------------~~~~~~~~~~~~~~pedvA~~v~fL~ 248 (272)
T 4dyv_A 220 AGV--------------------PQADLSIKVEPVMDVAHVASAVVYMA 248 (272)
T ss_dssp ------------------------------------CHHHHHHHHHHHH
T ss_pred ccc--------------------hhhhhcccccCCCCHHHHHHHHHHHh
Confidence 111 01123456788999999999999999
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-40 Score=301.35 Aligned_cols=241 Identities=25% Similarity=0.292 Sum_probs=200.9
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|++|++++++++++
T Consensus 6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTSEKDVQTALALAK 81 (265)
T ss_dssp --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999998887776655 45789999999999999888875
Q ss_pred --cCCCcEEEEcCCCCCCCCcc------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEEecCCccc
Q 017757 109 --AGPVDVLVVNQGVFVPGELE------VQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN---GGPASIALMSSQAGQ 177 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~------~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~---~~~g~iv~vsS~~~~ 177 (366)
++++|+||||||......+. +.+.+++++++++|+.++++++++++|.|+++.. ...++||++||..+.
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 161 (265)
T 2o23_A 82 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF 161 (265)
T ss_dssp HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred HHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhc
Confidence 57999999999987665544 3789999999999999999999999999987621 126899999999887
Q ss_pred cccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 178 CWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
. +.++.. .|++||+|+++++++++.|++++||+||+|+||+
T Consensus 162 ~----------------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~ 202 (265)
T 2o23_A 162 E----------------------GQVGQA-----------------AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGL 202 (265)
T ss_dssp H----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred C----------------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEecc
Confidence 6 666666 9999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhC-CCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHH
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKS-GSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAA 336 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~-gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dg 336 (366)
++|++.+... ++..+.+...++. +++..|+|++..+.||+ + +.++||+++.+||
T Consensus 203 v~t~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~--~~~~~G~~i~vdg 257 (265)
T 2o23_A 203 FGTPLLTSLP-------------------EKVCNFLASQVPFPSRLGDPAEYAHLVQAII----E--NPFLNGEVIRLDG 257 (265)
T ss_dssp BCCC-----------------------------CHHHHTCSSSCSCBCHHHHHHHHHHHH----H--CTTCCSCEEEEST
T ss_pred ccCccccccC-------------------HHHHHHHHHcCCCcCCCCCHHHHHHHHHHHh----h--cCccCceEEEECC
Confidence 9999865421 1122233445666 89999999999999998 3 4689999999999
Q ss_pred HHH
Q 017757 337 GLI 339 (366)
Q Consensus 337 G~~ 339 (366)
|++
T Consensus 258 G~~ 260 (265)
T 2o23_A 258 AIR 260 (265)
T ss_dssp TCC
T ss_pred CEe
Confidence 975
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=302.01 Aligned_cols=253 Identities=20% Similarity=0.226 Sum_probs=215.5
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~- 108 (366)
....+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++++|++|.+++++++++
T Consensus 19 ~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (302)
T 1w6u_A 19 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL 98 (302)
T ss_dssp SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999999888888888765567899999999999999888765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||.....++.+.+.+++++++++|+.++++++++++|.|+++.. .++||++||.++..
T Consensus 99 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--~~~iv~isS~~~~~------- 169 (302)
T 1w6u_A 99 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK--GAAFLSITTIYAET------- 169 (302)
T ss_dssp HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEECCTHHHH-------
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--CCEEEEEccccccc-------
Confidence 589999999999887778888999999999999999999999999999984332 58999999998876
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC-hh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG-LE 264 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~-~~ 264 (366)
+.+... .|++||+|+++++++++.+++++||+||+|+||++.|+. ..
T Consensus 170 ---------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~ 217 (302)
T 1w6u_A 170 ---------------GSGFVV-----------------PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS 217 (302)
T ss_dssp ---------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred ---------------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh
Confidence 666666 899999999999999999999999999999999999983 32
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVAL 344 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~~~ 344 (366)
... ......+.+....+.++++.++|++..+.||+ ++.+.+++|+.+.+|||....+.-
T Consensus 218 ~~~-----------------~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gg~~~~~~~ 276 (302)
T 1w6u_A 218 RLD-----------------PTGTFEKEMIGRIPCGRLGTVEELANLAAFLC----SDYASWINGAVIKFDGGEEVLISG 276 (302)
T ss_dssp -CC-----------------TTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTHHHHHHS
T ss_pred hcc-----------------cchhhHHHHHhcCCcCCCCCHHHHHHHHHHHc----CCcccccCCCEEEECCCeeeccCC
Confidence 210 00111234456678899999999999999999 888999999999999998766443
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=295.01 Aligned_cols=241 Identities=20% Similarity=0.235 Sum_probs=208.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
++++++|+++||||+||||++++++|+++|++|++++|+.+++++..+++ ..+.++.+|++|+++++++++++++
T Consensus 2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (244)
T 1cyd_A 2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDLGDWDATEKALGGIGP 76 (244)
T ss_dssp -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCCcEEecCCCHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999999999988776655443 1345679999999999999998889
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+||||||.....++.+.+.+++++++++|+.++++++++++|.|++++. .++||++||..+..
T Consensus 77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~iv~~sS~~~~~------------- 141 (244)
T 1cyd_A 77 VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV--PGSIVNVSSMVAHV------------- 141 (244)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCGGGTS-------------
T ss_pred CCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC--CeEEEEEcchhhcC-------------
Confidence 999999999887778888999999999999999999999999999987531 47999999998876
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.+... .|++||++++.++++++.|++++||+||+|+||.+.|++.....
T Consensus 142 ---------~~~~~~-----------------~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~---- 191 (244)
T 1cyd_A 142 ---------TFPNLI-----------------TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS---- 191 (244)
T ss_dssp ---------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT----
T ss_pred ---------CCCCcc-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccc----
Confidence 556666 89999999999999999999999999999999999998765321
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..++..+.+....+.+++..++|++..+.+|+ ++.+.+++|+.+.+|||++
T Consensus 192 -------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 192 -------------ADPEFARKLKERHPLRKFAEVEDVVNSILFLL----SDRSASTSGGGILVDAGYL 242 (244)
T ss_dssp -------------CCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSSEEEESTTGG
T ss_pred -------------cCHHHHHHHHhcCCccCCCCHHHHHHHHHHHh----CchhhcccCCEEEECCCcc
Confidence 11334445556677889999999999999999 8889999999999999974
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=323.62 Aligned_cols=257 Identities=14% Similarity=0.071 Sum_probs=201.1
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCch---------hHHHHHHHHHhh--cCCeEEEEEecCCCH--H
Q 017757 36 KDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGK---------KLEEAKQSIQLA--TGIEVATYSADVRDF--D 100 (366)
Q Consensus 36 ~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~---------~~~~~~~~l~~~--~~~~v~~~~~Dls~~--~ 100 (366)
++|++|||||++ |||+++|++|+++|++|++++|++. +++...+..... ....+..+++|+++. +
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 479999999986 9999999999999999998877652 222211111111 123478899999887 7
Q ss_pred ------------------HHHHHHHh----cCCCcEEEEcCCCC--CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 101 ------------------AVKTALDE----AGPVDVLVVNQGVF--VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156 (366)
Q Consensus 101 ------------------~v~~~~~~----~~~id~vi~nAG~~--~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 156 (366)
++++++++ ++++|++|||||+. ...++.+.+.++|++++++|+.|+++++++++|+
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 160 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 77766654 68999999999975 3578889999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc-cccccccccccccccccchhhhhHHHHHHH
Q 017757 157 IKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY-HVTSWRELSGQFCLLGTLLWIASKFGLRGL 235 (366)
Q Consensus 157 l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~asKaal~~l 235 (366)
|+++ |+||++||.++.. +.++. . .|++||+|+.+|
T Consensus 161 m~~~-----g~Iv~isS~~~~~----------------------~~~~~~~-----------------~Y~asKaal~~~ 196 (329)
T 3lt0_A 161 MKPQ-----SSIISLTYHASQK----------------------VVPGYGG-----------------GMSSAKAALESD 196 (329)
T ss_dssp EEEE-----EEEEEEECGGGTS----------------------CCTTCTT-----------------THHHHHHHHHHH
T ss_pred HhhC-----CeEEEEeCccccC----------------------CCCcchH-----------------HHHHHHHHHHHH
Confidence 9873 7999999999876 55555 4 899999999999
Q ss_pred HHHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCCc---------------chhhhhcc-----------CCCCCHHH
Q 017757 236 AEALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRPR---------------LTSIIAAS-----------SGAMKADE 288 (366)
Q Consensus 236 ~~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~~---------------~~~~~~~~-----------~~~~~~~~ 288 (366)
+++|+.|+++ +||+||+|+||+|+|++.+......+. ........ ....-.++
T Consensus 197 ~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (329)
T 3lt0_A 197 TRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDY 276 (329)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC------------------------------------------CHHHH
T ss_pred HHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHH
Confidence 9999999998 899999999999999988764221100 00000000 00001223
Q ss_pred HHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 289 VAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 289 ~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..+.+...++.+|++.|+|++..++||+ |++++|+||++|.+|||++.
T Consensus 277 ~~~~~~~~~p~~r~~~peevA~~v~fL~----s~~a~~itG~~i~vdGG~~~ 324 (329)
T 3lt0_A 277 AIEYSEKYAPLRQKLLSTDIGSVASFLL----SRESRAITGQTIYVDNGLNI 324 (329)
T ss_dssp HHHHHHHHSSSCSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHhhcCcccCcCCHHHHHHHHHHHh----CchhccccCcEEEEcCCeeE
Confidence 4667778889999999999999999999 99999999999999999874
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-40 Score=301.05 Aligned_cols=245 Identities=24% Similarity=0.276 Sum_probs=204.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc------CCeEEEEEecCCCHHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT------GIEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~------~~~v~~~~~Dls~~~~v~~~ 105 (366)
..++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.... ..++.++.+|++|+++++++
T Consensus 2 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 81 (264)
T 2pd6_A 2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL 81 (264)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence 456899999999999999999999999999999999999988887776665431 15688999999999999888
Q ss_pred HHh----cCCC-cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 106 LDE----AGPV-DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 106 ~~~----~~~i-d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
+++ ++++ |+||||||.....++.+.+.+++++++++|+.++++++++++|.|++++. .++||++||.++..
T Consensus 82 ~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~g~iv~isS~~~~~-- 157 (264)
T 2pd6_A 82 LEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC--RGSIINISSIVGKV-- 157 (264)
T ss_dssp HHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCTHHHH--
T ss_pred HHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC--CceEEEECChhhcc--
Confidence 765 5788 99999999987778888999999999999999999999999999987531 47999999998876
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||.+.|
T Consensus 158 --------------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 200 (264)
T 2pd6_A 158 --------------------GNVGQT-----------------NYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIAT 200 (264)
T ss_dssp --------------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred --------------------CCCCCh-----------------hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccc
Confidence 666666 9999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++..... ++..+.+....+.++++.++|++..+.||+ ++.+.+++|+.+.+|||++.
T Consensus 201 ~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gg~~~ 257 (264)
T 2pd6_A 201 PMTQKVP-------------------QKVVDKITEMIPMGHLGDPEDVADVVAFLA----SEDSGYITGTSVEVTGGLFM 257 (264)
T ss_dssp CC-----------------------------CTGGGCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTC--
T ss_pred cchhhcC-------------------HHHHHHHHHhCCCCCCCCHHHHHHHHHHHc----CCcccCCCCCEEEECCCcee
Confidence 9865321 112222334456788999999999999999 88889999999999999764
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=295.54 Aligned_cols=238 Identities=28% Similarity=0.370 Sum_probs=208.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
||+++||||++|||++++++|+++|++|++ .+|+.++.++..+++... +.++.++++|++|++++++++++ +++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999998 489888888777777654 56889999999999999888765 589
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||.....++.+.+.+++++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~------------- 143 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR---KGRIINIASVVGLI------------- 143 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCTHHHH-------------
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC---CCEEEEECChhhcC-------------
Confidence 99999999998878888899999999999999999999999999998765 68999999998876
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++....
T Consensus 144 ---------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----- 192 (244)
T 1edo_A 144 ---------GNIGQA-----------------NYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----- 192 (244)
T ss_dssp ---------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-----
T ss_pred ---------CCCCCc-----------------cchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc-----
Confidence 556666 8999999999999999999999999999999999999876532
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. ++..+.+....+.+++..|+|++..+.||+ .++.+.++||+.+.+|||++
T Consensus 193 -------------~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~---~~~~~~~~~G~~~~v~gG~~ 243 (244)
T 1edo_A 193 -------------G-EDMEKKILGTIPLGRTGQPENVAGLVEFLA---LSPAASYITGQAFTIDGGIA 243 (244)
T ss_dssp -------------C-HHHHHHHHTSCTTCSCBCHHHHHHHHHHHH---HCSGGGGCCSCEEEESTTTT
T ss_pred -------------C-hHHHHHHhhcCCCCCCCCHHHHHHHHHHHh---CCCccCCcCCCEEEeCCCcc
Confidence 1 233344556678899999999999999997 36778899999999999964
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=293.58 Aligned_cols=257 Identities=23% Similarity=0.282 Sum_probs=204.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|.+++++++++
T Consensus 1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----PDRAEAISLDVTDGERIDVVAADVLAR 76 (281)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999999998877765543 45789999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|+||||||.....++.+.+.++|++++++|+.|+++++++++|.|++++ .++||++||..+..
T Consensus 77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~---------- 143 (281)
T 3m1a_A 77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG---SGSVVNISSFGGQL---------- 143 (281)
T ss_dssp HSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTC----------
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEEEcCccccC----------
Confidence 58999999999998778888999999999999999999999999999999876 68999999998877
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++......
T Consensus 144 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~ 194 (281)
T 3m1a_A 144 ------------SFAGFS-----------------AYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAA 194 (281)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCE
T ss_pred ------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccccccccc
Confidence 666777 999999999999999999999999999999999999998654221
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCC--------CCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGL--------SPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~--------s~~~~~itG~~i~~dgG~~~ 340 (366)
...... ..........+......+.+++..++|++..+.+++..+. ++...+++|+...+++++..
T Consensus 195 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~~ 268 (281)
T 3m1a_A 195 YFSEEN------PAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELTE 268 (281)
T ss_dssp EECCBC------TTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcc------hhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHHH
Confidence 100000 0000011112233444566778888888888888875443 44558999999999999765
Q ss_pred H
Q 017757 341 F 341 (366)
Q Consensus 341 ~ 341 (366)
.
T Consensus 269 ~ 269 (281)
T 3m1a_A 269 W 269 (281)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=294.45 Aligned_cols=243 Identities=21% Similarity=0.252 Sum_probs=211.8
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|++++++++++
T Consensus 5 ~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999998888877777654 55788999999999999888764
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||.....++ +.+.+++++.+++|+.++++++++++|.|++++ .++||++||..+..
T Consensus 84 ~~~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~-------- 151 (255)
T 1fmc_A 84 SKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG---GGVILTITSMAAEN-------- 151 (255)
T ss_dssp HHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTC--------
T ss_pred HhcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CcEEEEEcchhhcC--------
Confidence 5799999999998776665 689999999999999999999999999998865 68999999988776
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||++++.++++++.|++++||+||+|+||++.|++....
T Consensus 152 --------------~~~~~~-----------------~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~ 200 (255)
T 1fmc_A 152 --------------KNINMT-----------------SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV 200 (255)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred --------------CCCCCc-----------------ccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc
Confidence 555666 8999999999999999999999999999999999999875431
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. ++..+.+....+.++++.++|++..+.||+ ++.+.+++|+++.+|||..
T Consensus 201 -----------------~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gg~~ 251 (255)
T 1fmc_A 201 -----------------IT-PEIEQKMLQHTPIRRLGQPQDIANAALFLC----SPAASWVSGQILTVSGGGV 251 (255)
T ss_dssp -----------------CC-HHHHHHHHHTCSSCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSC
T ss_pred -----------------cC-hHHHHHHHhcCCcccCCCHHHHHHHHHHHh----CCccccCCCcEEEECCcee
Confidence 11 233345556678899999999999999999 8888999999999999853
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=290.86 Aligned_cols=230 Identities=31% Similarity=0.459 Sum_probs=196.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++++|++|.+++++++++ +
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-GFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 488999999999999999999999999999999999999999988888765 66899999999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|+||||||+....++.+.+.+++++++++|+.|+++++++++|+|++++. .++||++||.++..
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--~g~iv~isS~~~~~----------- 173 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT--GGHIAFTASFAGLV----------- 173 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS--CEEEEEECCGGGTS-----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC--CcEEEEeCchhhcC-----------
Confidence 89999999999988888899999999999999999999999999999988653 47999999999887
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+|++.......
T Consensus 174 -----------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~ 225 (301)
T 3tjr_A 174 -----------PNAGLG-----------------TYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERI 225 (301)
T ss_dssp -----------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHH
T ss_pred -----------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccc
Confidence 777777 9999999999999999999999999999999999999998764322
Q ss_pred CCcch----------hhhhccCCCCCHHHHHHHHHhhhhCCCeEee
Q 017757 270 RPRLT----------SIIAASSGAMKADEVAKKALDGIKSGSFIVP 305 (366)
Q Consensus 270 ~~~~~----------~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~ 305 (366)
..... .........++|+++|+.++..+..++....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~~~i~ 271 (301)
T 3tjr_A 226 RGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANRLYIL 271 (301)
T ss_dssp C----------------------CCCHHHHHHHHHHHHHHTCSEEC
T ss_pred cchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcCCeEEe
Confidence 11100 0011112367999999999999988875543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=292.02 Aligned_cols=227 Identities=23% Similarity=0.258 Sum_probs=198.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++++|++|++++++++++ +++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999999999999999999999998888766688999999999999999988764 589
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|++|||||+....++.+.+.++|++++++|+.|+++++++++|+|+++ .+++|+++|..+..
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~ii~~sS~~~~~------------- 143 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT----GGLALVTTSDVSAR------------- 143 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCGGGSS-------------
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCcEEEEecchhcc-------------
Confidence 9999999999888889999999999999999999999999999999554 47899999988776
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
+.+... .|++||+|+++|++++ ++...||+||+|+||+|+|++........
T Consensus 144 ---------~~~~~~-----------------~Y~~sKaa~~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~~~~- 194 (235)
T 3l77_A 144 ---------LIPYGG-----------------GYVSTKWAARALVRTF--QIENPDVRFFELRPGAVDTYFGGSKPGKP- 194 (235)
T ss_dssp ---------CCTTCH-----------------HHHHHHHHHHHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCSCCC-
T ss_pred ---------cCCCcc-----------------hHHHHHHHHHHHHHHH--hhcCCCeEEEEEeCCccccccccccCCcc-
Confidence 666666 9999999999999999 44577999999999999999876432110
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
+..++..|+|++..+.||+ ++.+.+++|+.+..|+|.
T Consensus 195 --------------------------~~~~~~~p~dva~~v~~l~----~~~~~~~~~~~~~~~~~~ 231 (235)
T 3l77_A 195 --------------------------KEKGYLKPDEIAEAVRCLL----KLPKDVRVEELMLRSVYQ 231 (235)
T ss_dssp --------------------------GGGTCBCHHHHHHHHHHHH----TSCTTCCCCEEEECCTTS
T ss_pred --------------------------cccCCCCHHHHHHHHHHHH----cCCCCCccceEEEeeccc
Confidence 0116778888999999999 999999999998888874
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=299.96 Aligned_cols=237 Identities=21% Similarity=0.221 Sum_probs=192.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+|+ |++|||||++|||+++|++|+++|++|++++|+.++++++.+++... .++.++++|++|++++++++++
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 94 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4566 99999999999999999999999999999999998888887777542 5788999999999999999876
Q ss_pred cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc-EEEEecCCccccccccccCc
Q 017757 109 AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPA-SIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g-~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|+||||||+... .++.+.+.++|++++++|+.|+++++++++|.|++++ .+ +||++||..+..
T Consensus 95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~---~g~~IV~isS~~~~~-------- 163 (272)
T 2nwq_A 95 FATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG---AGASIVNLGSVAGKW-------- 163 (272)
T ss_dssp GSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC---TTCEEEEECCGGGTS--------
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEeCCchhcc--------
Confidence 4789999999998764 7888899999999999999999999999999998875 57 999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++....
T Consensus 164 --------------~~~~~~-----------------~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~ 212 (272)
T 2nwq_A 164 --------------PYPGSH-----------------VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR 212 (272)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------
T ss_pred --------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc
Confidence 666666 9999999999999999999999999999999999999986432
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
... +.+.. + ..........|+|++..++||+ ++ ..+++|+.+.+|+|.
T Consensus 213 ~~~---------------~~~~~-~---~~~~~~~~~~pedvA~~v~~l~----s~-~~~~~g~~i~v~~~~ 260 (272)
T 2nwq_A 213 FGG---------------DQARY-D---KTYAGAHPIQPEDIAETIFWIM----NQ-PAHLNINSLEIMPVS 260 (272)
T ss_dssp --------------------------------CCCCBCHHHHHHHHHHHH----TS-CTTEEEEEEEEEETT
T ss_pred ccc---------------chHHH-H---HhhccCCCCCHHHHHHHHHHHh----CC-CccCccceEEEeecc
Confidence 100 00111 0 1112234578999999999999 75 568899999888873
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=297.76 Aligned_cols=241 Identities=17% Similarity=0.105 Sum_probs=197.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHH-HHHHHHhcCCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA-VKTALDEAGPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~-v~~~~~~~~~id~vi 116 (366)
|++|||||++|||+++|++|+++|++|++++|+.++++++.+ +... +.++..+ |..+.+. ++++.++++++|+||
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~-~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv 77 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-YPQLKPM--SEQEPAELIEAVTSAYGQVDVLV 77 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-CTTSEEC--CCCSHHHHHHHHHHHHSCCCEEE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc-CCcEEEE--CHHHHHHHHHHHHHHhCCCCEEE
Confidence 689999999999999999999999999999999988877655 5443 4444444 5555443 344455678999999
Q ss_pred EcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 117 VNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 117 ~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||||.. ...++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 78 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~----------------- 137 (254)
T 1zmt_A 78 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK---SGHIIFITSATPFG----------------- 137 (254)
T ss_dssp EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCSTTTS-----------------
T ss_pred ECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CcEEEEECCccccc-----------------
Confidence 999987 667888999999999999999999999999999998875 68999999999876
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchh
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~ 275 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|.+++....... .
T Consensus 138 -----~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T-----~ 190 (254)
T 1zmt_A 138 -----PWKELS-----------------TYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPT-----E 190 (254)
T ss_dssp -----CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBH-----H
T ss_pred -----CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCC-----c
Confidence 666666 9999999999999999999999999999999999944433221100 0
Q ss_pred hhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 276 IIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 276 ~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... .. ++..+.+....+.+|++.|+|++..++||+ ++.+.++||+.+.+|||++
T Consensus 191 ~~~-----~~-~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~----s~~~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 191 PWK-----TN-PEHVAHVKKVTALQRLGTQKELGELVAFLA----SGSCDYLTGQVFWLAGGFP 244 (254)
T ss_dssp HHT-----TC-HHHHHHHHHHSSSSSCBCHHHHHHHHHHHH----TTSCGGGTTCEEEESTTCC
T ss_pred ccc-----cC-hHHHHHHhccCCCCCCcCHHHHHHHHHHHh----CcccCCccCCEEEECCCch
Confidence 000 01 233344556678899999999999999999 9999999999999999975
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-39 Score=302.65 Aligned_cols=252 Identities=20% Similarity=0.231 Sum_probs=211.7
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh----cCCeEEEEEecCCCHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA----TGIEVATYSADVRDFDAVK 103 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~----~~~~v~~~~~Dls~~~~v~ 103 (366)
+.....++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++... .+.++.++++|++|+++++
T Consensus 9 ~~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~ 88 (303)
T 1yxm_A 9 SYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN 88 (303)
T ss_dssp CSBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred CccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHH
Confidence 334455789999999999999999999999999999999999999888888887652 3568999999999999998
Q ss_pred HHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccc
Q 017757 104 TALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179 (366)
Q Consensus 104 ~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~ 179 (366)
+++++ ++++|+||||||.....++.+.+.+++++++++|+.++++++++++|.+.+++ .++||++||.. ..
T Consensus 89 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~iv~isS~~-~~- 163 (303)
T 1yxm_A 89 NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH---GGSIVNIIVPT-KA- 163 (303)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH---CEEEEEECCCC-TT-
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc---CCeEEEEEeec-cc-
Confidence 88765 58899999999987777788899999999999999999999999999655544 58999999987 54
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.+... .|+++|+|+.+++++++.|++++||+||+|+||++.
T Consensus 164 ---------------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 205 (303)
T 1yxm_A 164 ---------------------GFPLAV-----------------HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIY 205 (303)
T ss_dssp ---------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred ---------------------CCCcch-----------------hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcc
Confidence 555666 899999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 260 TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 260 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
|++........ .++..+.+...++.++++.++|++..+.||+ ++.+.++||+.+.+|||++
T Consensus 206 t~~~~~~~~~~---------------~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~----~~~~~~~~G~~~~v~gG~~ 266 (303)
T 1yxm_A 206 SQTAVENYGSW---------------GQSFFEGSFQKIPAKRIGVPEEVSSVVCFLL----SPAASFITGQSVDVDGGRS 266 (303)
T ss_dssp CTGGGTTSGGG---------------GGGGGTTGGGGSTTSSCBCTHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred cchhhhhcccc---------------chHHHHHHHhcCcccCCCCHHHHHHHHHHHh----CcccccCCCcEEEECCCee
Confidence 99532111000 0111122334567789999999999999999 9999999999999999986
Q ss_pred HH
Q 017757 340 RF 341 (366)
Q Consensus 340 ~~ 341 (366)
..
T Consensus 267 ~~ 268 (303)
T 1yxm_A 267 LY 268 (303)
T ss_dssp GC
T ss_pred cc
Confidence 43
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=295.85 Aligned_cols=249 Identities=20% Similarity=0.268 Sum_probs=207.5
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+.++.+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. ..++.++.+|++|+++++++++
T Consensus 7 ~~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~ 84 (278)
T 2bgk_A 7 PDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDEDVRNLVD 84 (278)
T ss_dssp ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC--CCceEEEECCCCCHHHHHHHHH
Confidence 45566789999999999999999999999999999999999998877766665532 2378999999999999988887
Q ss_pred h----cCCCcEEEEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTI 181 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~ 181 (366)
+ ++++|+||||||.... .++.+.+.+++++++++|+.++++++++++|.|++++ .++||++||..+..
T Consensus 85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~--- 158 (278)
T 2bgk_A 85 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK---KGSIVFTASISSFT--- 158 (278)
T ss_dssp HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT---CEEEEEECCGGGTC---
T ss_pred HHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC---CCeEEEEeeccccC---
Confidence 5 5799999999998643 5677889999999999999999999999999998865 68999999998876
Q ss_pred cccCccCccccccccccCCCCC-CccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 182 KNTNMKGINENKLCESSGKGHG-GYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.+ ... .|++||+|+++++++++.|++++||+|++|+||.+.|
T Consensus 159 -------------------~~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 202 (278)
T 2bgk_A 159 -------------------AGEGVSH-----------------VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVAS 202 (278)
T ss_dssp -------------------CCTTSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSC
T ss_pred -------------------CCCCCCc-----------------chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecc
Confidence 444 455 8999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhh--hhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDG--IKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
++....... . ++..+.+... .+.+++..++|++..+.||+ ++.+.++||+.+.+|||+
T Consensus 203 ~~~~~~~~~---------------~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gg~ 262 (278)
T 2bgk_A 203 PLLTDVFGV---------------D-SSRVEELAHQAANLKGTLLRAEDVADAVAYLA----GDESKYVSGLNLVIDGGY 262 (278)
T ss_dssp CCCTTSSSC---------------C-HHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTG
T ss_pred hhhhhhccc---------------c-hhHHHHhhhcccccccccCCHHHHHHHHHHHc----CcccccCCCCEEEECCcc
Confidence 986542110 1 2222223222 24578999999999999999 988999999999999997
Q ss_pred HH
Q 017757 339 IR 340 (366)
Q Consensus 339 ~~ 340 (366)
..
T Consensus 263 ~~ 264 (278)
T 2bgk_A 263 TR 264 (278)
T ss_dssp GG
T ss_pred cc
Confidence 63
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=319.67 Aligned_cols=240 Identities=23% Similarity=0.227 Sum_probs=200.2
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
...+++||++|||||++|||+++|++|+++|++|++++|+... ++..+..... .+.++.+|++|.+++++++++
T Consensus 207 ~~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~ 282 (454)
T 3u0b_A 207 WDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV---GGTALTLDVTADDAVDKITAHVT 282 (454)
T ss_dssp TTSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999997532 2232222222 346899999999999988765
Q ss_pred --cCC-CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 --AGP-VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 --~~~-id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
+++ +|+||||||+.....+.+.+.++|++++++|+.|++++++++.|.|++++ .++||++||.++..
T Consensus 283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~---~g~iV~iSS~a~~~------- 352 (454)
T 3u0b_A 283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE---GGRVIGLSSMAGIA------- 352 (454)
T ss_dssp HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT---TCEEEEECCHHHHH-------
T ss_pred HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CCEEEEEeChHhCC-------
Confidence 454 99999999999888899999999999999999999999999999988755 68999999999987
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+++++|+++++.|++++||+||+|+||+|+|++...
T Consensus 353 ---------------g~~g~~-----------------~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 400 (454)
T 3u0b_A 353 ---------------GNRGQT-----------------NYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA 400 (454)
T ss_dssp ---------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----
T ss_pred ---------------CCCCCH-----------------HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh
Confidence 777777 999999999999999999999999999999999999998765
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
... ...+......+.+|.+.|+|++..+.||+ |+.+.|+|||+|.+|||++
T Consensus 401 ~~~-------------------~~~~~~~~~~~l~r~g~pedvA~~v~fL~----s~~a~~itG~~i~vdGG~~ 451 (454)
T 3u0b_A 401 IPL-------------------ATREVGRRLNSLFQGGQPVDVAELIAYFA----SPASNAVTGNTIRVCGQAM 451 (454)
T ss_dssp ------------------------CHHHHHSBTTSSCBCHHHHHHHHHHHH----CGGGTTCCSCEEEESSSBS
T ss_pred cch-------------------hhHHHHHhhccccCCCCHHHHHHHHHHHh----CCccCCCCCcEEEECCccc
Confidence 321 11122234467889999999999999999 9999999999999999964
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=290.47 Aligned_cols=244 Identities=26% Similarity=0.321 Sum_probs=208.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++++|+++||||++|||++++++|+++|++|++++|+ .+++++..+++... +.++.++.+|++|++++++++++
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-GGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999 88888887777654 56899999999999999888765
Q ss_pred cCCCcEEEEcCCC-CCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCcEEEEecCCccccccccccC
Q 017757 109 AGPVDVLVVNQGV-FVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQ--NGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ~~~id~vi~nAG~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~--~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|+||||||. ....++.+.+.+++++++++|+.++++++++++|.|++++ .+..++||++||..+...
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------ 156 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG------ 156 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC------
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC------
Confidence 5789999999998 6667788899999999999999999999999999998653 222479999999876530
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+++++++++++.|++++||+||+|+||++.|++...
T Consensus 157 ---------------~~~~~~-----------------~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~ 204 (258)
T 3afn_B 157 ---------------GGPGAG-----------------LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD 204 (258)
T ss_dssp ---------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT
T ss_pred ---------------CCCCch-----------------HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc
Confidence 223444 899999999999999999999999999999999999997543
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchh-HHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRS-VLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~-~itG~~i~~dgG~~ 339 (366)
. . ++..+.+....+.++++.++|++..+.||+ ++.+. +++|+.+.+|||++
T Consensus 205 ~------------------~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~~G~~~~v~gg~~ 256 (258)
T 3afn_B 205 K------------------T-QDVRDRISNGIPMGRFGTAEEMAPAFLFFA----SHLASGYITGQVLDINGGQY 256 (258)
T ss_dssp C------------------C-HHHHHHHHTTCTTCSCBCGGGTHHHHHHHH----CHHHHTTCCSEEEEESTTSS
T ss_pred c------------------C-HHHHHHHhccCCCCcCCCHHHHHHHHHHHh----CcchhccccCCEEeECCCcc
Confidence 1 1 334445566678889999999999999999 88777 99999999999963
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=289.09 Aligned_cols=234 Identities=24% Similarity=0.379 Sum_probs=191.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++..... .++.++.+|++|++++++++++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999999999999999888876532 3799999999999999888875
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCCcEEEEecCCcccccccccc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKR---QNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~---~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|+||||||+....++.+.+.+++++++++|+.|+++++++++|.|.++ +.+..|+||++||.++..
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~------ 157 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL------ 157 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC------
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc------
Confidence 5899999999999888899999999999999999999999999999999875 212368999999999987
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+.+|+++++.|+.++||+|++|+||+|+|++..
T Consensus 158 ----------------~~~~~~-----------------~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 204 (319)
T 3ioy_A 158 ----------------AAGSPG-----------------IYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYA 204 (319)
T ss_dssp ----------------CCSSSH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----
T ss_pred ----------------CCCCCH-----------------HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccc
Confidence 777777 99999999999999999999999999999999999999876
Q ss_pred hhhhcCCcc------------hhhhhccCCCCCHHHHHHHHHhhhhCCCeEee
Q 017757 265 EENKRRPRL------------TSIIAASSGAMKADEVAKKALDGIKSGSFIVP 305 (366)
Q Consensus 265 ~~~~~~~~~------------~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~ 305 (366)
......... ..........++|+++++.++..+..++....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~~~i~ 257 (319)
T 3ioy_A 205 SDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKANRLHIF 257 (319)
T ss_dssp ------------------------CCGGGSSBCHHHHHHHHHHHHHTTCSEEC
T ss_pred ccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCCCEEE
Confidence 532211110 00111111237999999999999999885543
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=304.89 Aligned_cols=246 Identities=21% Similarity=0.193 Sum_probs=191.5
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
...++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|.++++++++++
T Consensus 9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----AGQVEVRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----cCCeeEEEcCCCCHHHHHHHHHhc
Confidence 3456799999999999999999999999999999999999998887766554 568999999999999999999999
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|+||||||+..+. .+.+.+++++++++|+.|+++++++++|.|++ +||++||.++....+.....
T Consensus 85 ~~iD~lv~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------riv~isS~~~~~~~~~~~~~--- 152 (291)
T 3rd5_A 85 SGADVLINNAGIMAVP--YALTVDGFESQIGTNHLGHFALTNLLLPRLTD-------RVVTVSSMAHWPGRINLEDL--- 152 (291)
T ss_dssp CCEEEEEECCCCCSCC--CCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-------EEEEECCGGGTTCCCCSSCT---
T ss_pred CCCCEEEECCcCCCCc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------heeEeechhhccCCCCcccc---
Confidence 9999999999986543 56788999999999999999999999999854 89999999887522111100
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCC--cEEEEEcCCCCCCCChhhhh
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADD--IHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~Vn~V~PG~v~T~~~~~~~ 267 (366)
.. ...++++...|++||+|+++|+++++.|++++| |+||+|+||+|+|++.+...
T Consensus 153 ------~~-----------------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~ 209 (291)
T 3rd5_A 153 ------NW-----------------RSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG 209 (291)
T ss_dssp ------TC-----------------SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----
T ss_pred ------cc-----------------cccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc
Confidence 00 001223334899999999999999999999888 99999999999999876532
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEe-eCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIV-PCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~-~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++..+. ....+.+++.. |+|++..++||+ ++ .++||+.+.+|||+..
T Consensus 210 -------------------~~~~~~-~~~~~~~~~~~~~~~~A~~~~~l~----~~--~~~~G~~~~vdgG~~~ 257 (291)
T 3rd5_A 210 -------------------RKLGDA-LMSAATRVVATDADFGARQTLYAA----SQ--DLPGDSFVGPRFGYLG 257 (291)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHH----HS--CCCTTCEEEETTSSSS
T ss_pred -------------------hHHHHH-HHHHHHHHHhCCHHHHHHHHHHHH----cC--CCCCCceeCCcccccC
Confidence 111111 22345666666 999999999999 66 3899999999999763
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=292.62 Aligned_cols=257 Identities=19% Similarity=0.241 Sum_probs=213.2
Q ss_pred cCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH
Q 017757 27 RPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 27 ~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~ 105 (366)
.+....+++++|++|||||+||||++++++|+++|++|++++| +.+.+++..+++... +.++.++.+|++|+++++++
T Consensus 11 ~~~~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~ 89 (274)
T 1ja9_A 11 GPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADISKPSEVVAL 89 (274)
T ss_dssp -----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHH
Confidence 3455667899999999999999999999999999999999999 777777777777653 56788999999999999888
Q ss_pred HHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc-ccc
Q 017757 106 LDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ-CWT 180 (366)
Q Consensus 106 ~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~-~~~ 180 (366)
+++ ++++|++|||||.....++.+.+.+++++++++|+.++++++++++|.|++ .++||++||..+. .
T Consensus 90 ~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~iv~~sS~~~~~~-- 162 (274)
T 1ja9_A 90 FDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-----GGRIILTSSIAAVMT-- 162 (274)
T ss_dssp HHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-----EEEEEEECCGGGTCC--
T ss_pred HHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CCEEEEEcChHhccC--
Confidence 765 579999999999987778888999999999999999999999999999873 3799999998876 4
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.++.. .|++||++++.++++++.|++++||+||+|+||.+.|
T Consensus 163 --------------------~~~~~~-----------------~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t 205 (274)
T 1ja9_A 163 --------------------GIPNHA-----------------LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKT 205 (274)
T ss_dssp --------------------SCCSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred --------------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccc
Confidence 455556 8999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
++........ ..........++..+.+....+.++++.++|++..+.+|+ ++.+.+++|+.+.+|||+
T Consensus 206 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~----~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 206 DMFDENSWHY------APGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC----QEESEWINGQVIKLTGGG 273 (274)
T ss_dssp HHHHHHGGGT------STTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTC
T ss_pred cchhcccccc------cccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHh----CcccccccCcEEEecCCc
Confidence 9876432111 0000001222445555666778899999999999999999 888899999999999995
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=325.81 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=202.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecC-CCHHH-HHHHHHhcC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV-RDFDA-VKTALDEAG 110 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dl-s~~~~-v~~~~~~~~ 110 (366)
++++||+++||||++|||+++|++|+++|++|++++|. .++++.+++... +.++..+.+|+ ++.++ ++++.++++
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~-g~~~~~~~~Dv~~~~~~~~~~~~~~~G 394 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA-GGEAWPDQHDVAKDSEAIIKNVIDKYG 394 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc-CCeEEEEEcChHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999999874 235556666553 56788888999 55544 455566689
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..
T Consensus 395 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~---~G~IVnisS~ag~~------------ 459 (604)
T 2et6_A 395 TIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ---FGRIINITSTSGIY------------ 459 (604)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCHHHHS------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEECChhhcc------------
Confidence 999999999998878889999999999999999999999999999998865 68999999999887
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.++.. .|++||+|+.+|+++|+.|++++|||||+|+||. +|+|.....
T Consensus 460 ----------~~~~~~-----------------~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~--- 508 (604)
T 2et6_A 460 ----------GNFGQA-----------------NYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIM--- 508 (604)
T ss_dssp ----------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------
T ss_pred ----------CCCCCh-----------------hHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccC---
Confidence 667777 9999999999999999999999999999999995 999865311
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH------
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVAL------ 344 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~~~------ 344 (366)
+++ ..+...|+|++..+.||+ |+++. +||+++.+|||++....+
T Consensus 509 ---------------~~~----------~~~~~~pe~vA~~v~~L~----s~~~~-itG~~~~vdGG~~~~~~~~~~~~~ 558 (604)
T 2et6_A 509 ---------------REQ----------DKNLYHADQVAPLLVYLG----TDDVP-VTGETFEIGGGWIGNTRWQRAKGA 558 (604)
T ss_dssp -----------------------------CCSSCGGGTHHHHHHTT----STTCC-CCSCEEEEETTEEEEEEEEECCCE
T ss_pred ---------------chh----------hccCCCHHHHHHHHHHHh----CCccC-CCCcEEEECCCeeEeeeeeccccc
Confidence 011 123458999999999999 99999 999999999997532110
Q ss_pred H---hhhhhHHHHHHHHh
Q 017757 345 C---FQWNWYGSIEKWHA 359 (366)
Q Consensus 345 ~---~~~~~~~~~~~~~~ 359 (366)
+ -.|...+...+|.+
T Consensus 559 ~~~~~~~~~~~~~~~~~~ 576 (604)
T 2et6_A 559 VSHDEHTTVEFIKEHLNE 576 (604)
T ss_dssp ECCSSSCCHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHH
Confidence 1 12566666677764
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=287.38 Aligned_cols=236 Identities=26% Similarity=0.339 Sum_probs=206.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhcCCeEEE-EEecCCCHHHHHHHHHh----cC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVAT-YSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~-~~~Dls~~~~v~~~~~~----~~ 110 (366)
+|+++||||++|||++++++|+++|++|+++ +|+.+++++..+++... +.++.. +.+|++|.+++++++++ ++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-GSPLVAVLGANLLEAEAATALVHQAAEVLG 79 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT-TCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence 5799999999999999999999999999998 89988888877777654 445666 99999999999888765 57
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||.....++.+.+.+++++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus 80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~------------ 144 (245)
T 2ph3_A 80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR---FGRIVNITSVVGIL------------ 144 (245)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCTHHHH------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC---CCEEEEEeChhhcc------------
Confidence 999999999988777788899999999999999999999999999998865 68999999988776
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.++.. .|++||+|+++++++++.|+.++||+||+|+||+++|++.+..
T Consensus 145 ----------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---- 193 (245)
T 2ph3_A 145 ----------GNPGQA-----------------NYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---- 193 (245)
T ss_dssp ----------CCSSBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS----
T ss_pred ----------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc----
Confidence 556666 8999999999999999999999999999999999999875431
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
. ++..+.+....+.+++..++|++..+.+++ ++.+.+++|+.+.+|||+
T Consensus 194 --------------~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 194 --------------P-QEVKEAYLKQIPAGRFGRPEEVAEAVAFLV----SEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp --------------C-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTC
T ss_pred --------------C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CcccccccCCEEEECCCC
Confidence 1 233344555667889999999999999999 888889999999999995
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=286.75 Aligned_cols=223 Identities=18% Similarity=0.279 Sum_probs=184.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~vi 116 (366)
|++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++.+|++|.+++++++++. ...|++|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SNNVGYRARDLASHQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hhccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence 68999999999999999999999999999999998888776655 557889999999999999999986 3459999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
||||.....++.+.+.++|++++++|+.++++++++++|.|++++ ++||++||..+..
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~iv~isS~~~~~------------------ 135 (230)
T 3guy_A 78 HSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP----VNVVMIMSTAAQQ------------------ 135 (230)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC----CEEEEECCGGGTS------------------
T ss_pred EeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CeEEEEeecccCC------------------
Confidence 999998888899999999999999999999999999999998764 4999999999877
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhh
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSI 276 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~ 276 (366)
+.++.. .|++||+|+.+|+++++.|++++||+||+|+||+++|++.+....
T Consensus 136 ----~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------- 186 (230)
T 3guy_A 136 ----PKAQES-----------------TYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK-------- 186 (230)
T ss_dssp ----CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------
T ss_pred ----CCCCCc-----------------hhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC--------
Confidence 667777 999999999999999999999999999999999999998654211
Q ss_pred hhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 277 IAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 277 ~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
..+.+++..|+|++..+.||+ .++.+.|+||+.+..|..
T Consensus 187 -------------------~~~~~~~~~~~dvA~~i~~l~---~~~~~~~itg~~~~~~~~ 225 (230)
T 3guy_A 187 -------------------SLDTSSFMSAEDAALMIHGAL---ANIGNGYVSDITVNREGH 225 (230)
T ss_dssp -------------------------CCCHHHHHHHHHHHC---CEETTEEEEEEEEEC---
T ss_pred -------------------CCCcccCCCHHHHHHHHHHHH---hCcCCCCccceeecCCCC
Confidence 124578888999999999988 338888999887665543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-40 Score=310.55 Aligned_cols=251 Identities=17% Similarity=0.129 Sum_probs=162.3
Q ss_pred CCcCCCCCEEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCc-----------hhHH-----------HHHHHHHhhcC
Q 017757 31 VRIPIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSG-----------KKLE-----------EAKQSIQLATG 86 (366)
Q Consensus 31 ~~~~l~gk~vLITGa--s~gIG~aia~~L~~~G~~V~l~~r~~-----------~~~~-----------~~~~~l~~~~~ 86 (366)
+.++++||++||||| ++|||+++|++|+++|++|++++|++ ++++ ++.+++....+
T Consensus 3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (319)
T 2ptg_A 3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV 82 (319)
T ss_dssp CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence 346789999999999 89999999999999999999998753 2222 12223322211
Q ss_pred C--eEEEEEec------------CCC--------HHHHHHHHH----hcCCCcEEEEcCCCCC--CCCccCCCHHHHHHH
Q 017757 87 I--EVATYSAD------------VRD--------FDAVKTALD----EAGPVDVLVVNQGVFV--PGELEVQSLDEVRLM 138 (366)
Q Consensus 87 ~--~v~~~~~D------------ls~--------~~~v~~~~~----~~~~id~vi~nAG~~~--~~~~~~~~~~~~~~~ 138 (366)
. ....+.+| ++| +++++++++ +++++|+||||||+.. ..++.+.+.++|+++
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 162 (319)
T 2ptg_A 83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA 162 (319)
T ss_dssp --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence 0 02333333 333 235555544 4689999999999763 567788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc-cccccccccccc
Q 017757 139 IDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY-HVTSWRELSGQF 217 (366)
Q Consensus 139 ~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 217 (366)
+++|+.++++++++++|+|++ .++||++||.++.. +.++. .
T Consensus 163 ~~vN~~g~~~l~~~~~~~m~~-----~g~Iv~isS~~~~~----------------------~~~~~~~----------- 204 (319)
T 2ptg_A 163 VSSSSYSFVSLLQHFLPLMKE-----GGSALALSYIASEK----------------------VIPGYGG----------- 204 (319)
T ss_dssp HHHHTHHHHHHHHHHGGGEEE-----EEEEEEEEECC-------------------------------------------
T ss_pred HhHhhHHHHHHHHHHHHHHhc-----CceEEEEecccccc----------------------ccCccch-----------
Confidence 999999999999999999975 37999999998876 55554 5
Q ss_pred cccccchhhhhHHHHHHHHHHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhh
Q 017757 218 CLLGTLLWIASKFGLRGLAEALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDG 296 (366)
Q Consensus 218 ~~~~~~~Y~asKaal~~l~~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 296 (366)
.|++||+|+.+|+++++.|+++ +|||||+|+||+|+|++.......... ...++..+.+...
T Consensus 205 ------~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 267 (319)
T 2ptg_A 205 ------GMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDK-----------TFIDLAIDYSEAN 267 (319)
T ss_dssp --------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------------------------------------
T ss_pred ------hhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccch-----------hhHHHHHHHHhcc
Confidence 8999999999999999999996 899999999999999986542110000 0011222233455
Q ss_pred hhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 297 IKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 297 i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++.+|++.|+|++..++||+ ++.++|+||+++.+|||++.
T Consensus 268 ~p~~r~~~peevA~~v~~L~----s~~~~~itG~~i~vdGG~~~ 307 (319)
T 2ptg_A 268 APLQKELESDDVGRAALFLL----SPLARAVTGATLYVDNGLHA 307 (319)
T ss_dssp -----CCCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTCTT
T ss_pred CCCCCCCCHHHHHHHHHHHh----CcccCCccCCEEEECCCcee
Confidence 78899999999999999999 99999999999999999763
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=305.42 Aligned_cols=247 Identities=19% Similarity=0.170 Sum_probs=192.8
Q ss_pred CcCCCCCEEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCch-----------hHHHHHHHHHhhcCCe---EEEEEe-
Q 017757 32 RIPIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSGK-----------KLEEAKQSIQLATGIE---VATYSA- 94 (366)
Q Consensus 32 ~~~l~gk~vLITGa--s~gIG~aia~~L~~~G~~V~l~~r~~~-----------~~~~~~~~l~~~~~~~---v~~~~~- 94 (366)
.++++||++||||| ++|||+++|++|+++|++|++++|++. ++++. +++.. +.. +.++.+
T Consensus 4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~d 80 (315)
T 2o2s_A 4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPD--GSLIEFAGVYPLD 80 (315)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTT--SCBCCCSCEEECC
T ss_pred cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhc--ccccccccccccc
Confidence 46789999999999 899999999999999999999998641 11111 11111 110 233333
Q ss_pred -----------cCCC--------HHHHHHHHH----hcCCCcEEEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHH
Q 017757 95 -----------DVRD--------FDAVKTALD----EAGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHM 149 (366)
Q Consensus 95 -----------Dls~--------~~~v~~~~~----~~~~id~vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l 149 (366)
|++| +++++++++ +++++|++|||||+.. ..++.+.+.++|++++++|+.+++++
T Consensus 81 ~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 160 (315)
T 2o2s_A 81 AAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSL 160 (315)
T ss_dssp TTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHH
Confidence 3443 445555554 4689999999999764 56778899999999999999999999
Q ss_pred HHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc-cccccccccccccccccchhhhh
Q 017757 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY-HVTSWRELSGQFCLLGTLLWIAS 228 (366)
Q Consensus 150 ~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~as 228 (366)
+++++|+|++ .|+||++||.++.. +.++. . .|++|
T Consensus 161 ~~~~~~~m~~-----~g~Iv~isS~~~~~----------------------~~~~~~~-----------------~Y~as 196 (315)
T 2o2s_A 161 LQHFGPIMNE-----GGSAVTLSYLAAER----------------------VVPGYGG-----------------GMSSA 196 (315)
T ss_dssp HHHHSTTEEE-----EEEEEEEEEGGGTS----------------------CCTTCCT-----------------THHHH
T ss_pred HHHHHHHHhc-----CCEEEEEecccccc----------------------cCCCccH-----------------HHHHH
Confidence 9999999975 37999999998876 55554 4 79999
Q ss_pred HHHHHHHHHHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCC
Q 017757 229 KFGLRGLAEALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCN 307 (366)
Q Consensus 229 Kaal~~l~~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~ 307 (366)
|+|+.+|+++++.|+++ +||+||+|+||+|+|++......... ....++..+.+...++.+|++.|+|
T Consensus 197 Kaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~-----------~~~~~~~~~~~~~~~p~~r~~~ped 265 (315)
T 2o2s_A 197 KAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE-----------KSFIDYAIDYSYNNAPLRRDLHSDD 265 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSS-----------SCHHHHHHHHHHHHSSSCCCCCHHH
T ss_pred HHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccccc-----------chhHHHHHHHHhccCCCCCCCCHHH
Confidence 99999999999999985 89999999999999998654321000 0001333344556678999999999
Q ss_pred chhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 308 SEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 308 v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++..++||+ |+.+.|+||+++.+|||++.
T Consensus 266 vA~~v~~L~----s~~~~~itG~~i~vdGG~~~ 294 (315)
T 2o2s_A 266 VGGAALFLL----SPLARAVSGVTLYVDNGLHA 294 (315)
T ss_dssp HHHHHHHHT----SGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHh----CchhccCcCCEEEECCCeee
Confidence 999999999 99999999999999999763
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=304.19 Aligned_cols=243 Identities=17% Similarity=0.148 Sum_probs=192.3
Q ss_pred CCcCCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchh-----------HHHHHHHHHhhcC--CeEEEEEec
Q 017757 31 VRIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKK-----------LEEAKQSIQLATG--IEVATYSAD 95 (366)
Q Consensus 31 ~~~~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~-----------~~~~~~~l~~~~~--~~v~~~~~D 95 (366)
+.++++||++|||||+ +|||+++|++|+++|++|++++|++.. ++++ +++.. .. .....+.+|
T Consensus 2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~ 79 (297)
T 1d7o_A 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLD 79 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEEC
T ss_pred CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccc
Confidence 3577899999999999 999999999999999999999976321 1111 11110 00 112334443
Q ss_pred --------CC----C--------HHHHHHHH----HhcCCCcEEEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHH
Q 017757 96 --------VR----D--------FDAVKTAL----DEAGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHM 149 (366)
Q Consensus 96 --------ls----~--------~~~v~~~~----~~~~~id~vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l 149 (366)
++ | ++++++++ ++++++|+||||||+.. ..++.+.+.++|++++++|+.+++++
T Consensus 80 ~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 159 (297)
T 1d7o_A 80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL 159 (297)
T ss_dssp TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred eeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHH
Confidence 32 2 44555554 44689999999999754 56778899999999999999999999
Q ss_pred HHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc-cccccccccccccccccchhhhh
Q 017757 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY-HVTSWRELSGQFCLLGTLLWIAS 228 (366)
Q Consensus 150 ~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~as 228 (366)
+++++|+|++ .++||++||.++.. +.++. . .|++|
T Consensus 160 ~~~~~~~m~~-----~g~iv~isS~~~~~----------------------~~~~~~~-----------------~Y~as 195 (297)
T 1d7o_A 160 LSHFLPIMNP-----GGASISLTYIASER----------------------IIPGYGG-----------------GMSSA 195 (297)
T ss_dssp HHHHGGGEEE-----EEEEEEEECGGGTS----------------------CCTTCTT-----------------THHHH
T ss_pred HHHHHHHhcc-----CceEEEEecccccc----------------------CCCCcch-----------------HHHHH
Confidence 9999999965 37999999998876 55555 5 89999
Q ss_pred HHHHHHHHHHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCC
Q 017757 229 KFGLRGLAEALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCN 307 (366)
Q Consensus 229 Kaal~~l~~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~ 307 (366)
|+|+++|+++++.|+++ +||+||+|+||+|+|++.+... ..++..+.+....+.+|++.|+|
T Consensus 196 Kaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~-----------------~~~~~~~~~~~~~p~~r~~~ped 258 (297)
T 1d7o_A 196 KAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG-----------------FIDTMIEYSYNNAPIQKTLTADE 258 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS-----------------HHHHHHHHHHHHSSSCCCBCHHH
T ss_pred HHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc-----------------ccHHHHHHhhccCCCCCCCCHHH
Confidence 99999999999999985 8999999999999999864310 12344455556678899999999
Q ss_pred chhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 308 SEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 308 v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++..++||+ ++.+.++||+++.+|||++.
T Consensus 259 vA~~v~~l~----s~~~~~itG~~i~vdgG~~~ 287 (297)
T 1d7o_A 259 VGNAAAFLV----SPLASAITGATIYVDNGLNS 287 (297)
T ss_dssp HHHHHHHHT----SGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHh----CccccCCCCCEEEECCCcee
Confidence 999999999 99999999999999999864
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=322.83 Aligned_cols=228 Identities=29% Similarity=0.366 Sum_probs=191.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc---------hhHHHHHHHHHhhcCCeEEEEEecCCCHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG---------KKLEEAKQSIQLATGIEVATYSADVRDFDAV 102 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~---------~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v 102 (366)
.++++||+++||||++|||+++|++|+++|++|++++|+. +.++++.+++... +.++. +|++|.+++
T Consensus 3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-g~~~~---~d~~d~~~~ 78 (604)
T 2et6_A 3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN-GGVAV---ADYNNVLDG 78 (604)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT-TCEEE---EECCCTTCH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc-CCeEE---EEcCCHHHH
Confidence 3578999999999999999999999999999999998765 6677777777654 44443 466665444
Q ss_pred ----HHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 103 ----KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 103 ----~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
+++.++++++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..
T Consensus 79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~---~G~IVnisS~ag~~ 155 (604)
T 2et6_A 79 DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK---YGRIVNTSSPAGLY 155 (604)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEECCHHHcC
Confidence 44455689999999999998778889999999999999999999999999999999876 68999999999887
Q ss_pred ccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
+.++.. .|++||+|+.+|+++|+.|++++|||||+|+|| +
T Consensus 156 ----------------------~~~~~~-----------------~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~ 195 (604)
T 2et6_A 156 ----------------------GNFGQA-----------------NYASAKSALLGFAETLAKEGAKYNIKANAIAPL-A 195 (604)
T ss_dssp ----------------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-C
T ss_pred ----------------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-C
Confidence 777777 999999999999999999999999999999998 6
Q ss_pred CCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 259 ETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 259 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
+|++.... .+ ++. . +...|+|++..++||+ |+. .++||+++.+|||+
T Consensus 196 ~T~m~~~~-----------------~~-~~~----~------~~~~pe~vA~~v~~L~----s~~-~~itG~~~~vdgG~ 242 (604)
T 2et6_A 196 RSRMTESI-----------------MP-PPM----L------EKLGPEKVAPLVLYLS----SAE-NELTGQFFEVAAGF 242 (604)
T ss_dssp CCHHHHTT-----------------SC-HHH----H------TTCSHHHHHHHHHHHT----SSS-CCCCSCEEEEETTE
T ss_pred cCcccccc-----------------CC-hhh----h------ccCCHHHHHHHHHHHh----CCc-ccCCCCEEEECCCe
Confidence 88765421 11 111 0 1247899999999999 988 99999999999996
Q ss_pred H
Q 017757 339 I 339 (366)
Q Consensus 339 ~ 339 (366)
+
T Consensus 243 ~ 243 (604)
T 2et6_A 243 Y 243 (604)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=275.09 Aligned_cols=230 Identities=22% Similarity=0.243 Sum_probs=186.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id 113 (366)
|+++||||++|||+++|++|+++|++|++++|+.++++++.+++. .++.++.+|++|++++++++++ ++++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 689999999999999999999999999999999888877766653 4688999999999999999986 47899
Q ss_pred EEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 114 VLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 114 ~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
++|||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++++ .++||++||.++..
T Consensus 77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~---~g~iv~isS~~~~~-------------- 139 (248)
T 3asu_A 77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN---HGHIINIGSTAGSW-------------- 139 (248)
T ss_dssp EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCGGGTS--------------
T ss_pred EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CceEEEEccchhcc--------------
Confidence 9999999874 56778899999999999999999999999999998765 68999999998876
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC-CCChhhhhhcCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE-TPGLEEENKRRP 271 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~-T~~~~~~~~~~~ 271 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+|+ |++.......
T Consensus 140 --------~~~~~~-----------------~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~-- 192 (248)
T 3asu_A 140 --------PYAGGN-----------------VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG-- 192 (248)
T ss_dssp --------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------
T ss_pred --------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC--
Confidence 666667 999999999999999999999999999999999999 9975421100
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
.++..+.. ........|+|++..+.||+ ++ .+++||+.+.++++
T Consensus 193 --------------~~~~~~~~---~~~~~~~~p~dvA~~v~~l~----s~-~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 193 --------------DDGKAEKT---YQNTVALTPEDVSEAVWWVS----TL-PAHVNINTLEMMPV 236 (248)
T ss_dssp -----------------------------CCBCHHHHHHHHHHHH----HS-CTTCCCCEEEECCT
T ss_pred --------------chHHHHHH---HhccCCCCHHHHHHHHHHHh----cC-CccceeeEEEEccc
Confidence 00000111 11234568899999999999 65 46788888887765
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=285.29 Aligned_cols=190 Identities=24% Similarity=0.316 Sum_probs=159.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-----chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-----GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~-----~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
|++++|+++||||++|||+++|++|+++|++|++++|+ .++++++.+.+... +.++.++++|++|+++++++++
T Consensus 1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~~~~~~~~~Dvtd~~~v~~~~~ 79 (324)
T 3u9l_A 1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DVDLRTLELDVQSQVSVDRAID 79 (324)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHH
Confidence 46789999999999999999999999999999998876 34455555554433 6789999999999999988876
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
+ ++++|+||||||+....++.+.+.+++++++++|+.|+++++++++|+|++++ .++||++||..+...
T Consensus 80 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~---~g~iV~isS~~~~~~---- 152 (324)
T 3u9l_A 80 QIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK---HGLLIWISSSSSAGG---- 152 (324)
T ss_dssp HHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTSC----
T ss_pred HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCEEEEEecchhccC----
Confidence 5 58999999999998888899999999999999999999999999999999876 689999999988740
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
..++.. .|++||+|+++++++++.|++++||+||+|+||++.|++.
T Consensus 153 -----------------~~~~~~-----------------~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 153 -----------------TPPYLA-----------------PYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp -----------------CCSSCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred -----------------CCCcch-----------------hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 334455 8999999999999999999999999999999999998864
Q ss_pred h
Q 017757 264 E 264 (366)
Q Consensus 264 ~ 264 (366)
.
T Consensus 199 ~ 199 (324)
T 3u9l_A 199 H 199 (324)
T ss_dssp -
T ss_pred h
Confidence 3
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=286.82 Aligned_cols=242 Identities=20% Similarity=0.238 Sum_probs=193.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh----
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++.+|++|++++++++++
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999988877777775432 34788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|+||||||... .++|++.+++|+.+++.+++.++|+|++++.+..++||++||.++..
T Consensus 84 ~g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 145 (267)
T 2gdz_A 84 FGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM---------- 145 (267)
T ss_dssp HSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----------
T ss_pred cCCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC----------
Confidence 589999999999752 35688999999999999999999999876432358999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHH--HhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEAL--QQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~l--a~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|++++++++ +.|++++||+||+|+||+++|++....
T Consensus 146 ------------~~~~~~-----------------~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~ 196 (267)
T 2gdz_A 146 ------------PVAQQP-----------------VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESI 196 (267)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGG
T ss_pred ------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcc
Confidence 666666 8999999999999995 689999999999999999999976542
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.... ... ...+..+.+...++.++++.|+|++..++||+ ++. ++||+++.+|||..
T Consensus 197 ~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~----s~~--~~~G~~~~v~gg~~ 252 (267)
T 2gdz_A 197 EKEE-NMG----------QYIEYKDHIKDMIKYYGILDPPLIANGLITLI----EDD--ALNGAIMKITTSKG 252 (267)
T ss_dssp GCHH-HHG----------GGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH----HCT--TCSSCEEEEETTTE
T ss_pred cccc-ccc----------hhhhHHHHHHHHhccccCCCHHHHHHHHHHHh----cCc--CCCCcEEEecCCCc
Confidence 1100 000 00001122222344556789999999999999 665 38999999999853
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=287.14 Aligned_cols=220 Identities=13% Similarity=0.055 Sum_probs=188.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
..++|++|||||++|||+++|++|+++|++|++++|+.++.+ ....++++|++|++++++++++ +
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~~~~ 72 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLL 72 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999999876532 1457789999999999888775 4
Q ss_pred --CCCcEEEEcCCCCCCCCc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 110 --GPVDVLVVNQGVFVPGEL-EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 110 --~~id~vi~nAG~~~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
+++|++|||||.....++ .+.+.+++++++++|+.++++++++++|+|++ .++||++||.++..
T Consensus 73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~-------- 139 (241)
T 1dhr_A 73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-----GGLLTLAGAKAALD-------- 139 (241)
T ss_dssp TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCGGGGS--------
T ss_pred CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-----CCEEEEECCHHHcc--------
Confidence 699999999998877777 77889999999999999999999999999965 47999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc--cCCcEEEEEcCCCCCCCChh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++++++++.|++ ++||+||+|+||+++|++..
T Consensus 140 --------------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~ 188 (241)
T 1dhr_A 140 --------------GTPGMI-----------------GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR 188 (241)
T ss_dssp --------------CCTTBH-----------------HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH
T ss_pred --------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc
Confidence 666666 999999999999999999999 99999999999999999765
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...... +..+...++|++..+.||+ ++.+.++||+.+.+|||..
T Consensus 189 ~~~~~~---------------------------~~~~~~~~~~vA~~v~~l~----~~~~~~~~G~~~~v~g~~~ 232 (241)
T 1dhr_A 189 KSMPEA---------------------------DFSSWTPLEFLVETFHDWI----TGNKRPNSGSLIQVVTTDG 232 (241)
T ss_dssp HHSTTS---------------------------CGGGSEEHHHHHHHHHHHH----TTTTCCCTTCEEEEEEETT
T ss_pred ccCcch---------------------------hhccCCCHHHHHHHHHHHh----cCCCcCccceEEEEeCCCC
Confidence 431100 0123456788999999999 9999999999999999854
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=278.61 Aligned_cols=228 Identities=21% Similarity=0.315 Sum_probs=198.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-------RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
++|++|||||++|||++++++|+++|+ +|++++|+.++++++.+++... +.++.++.+|++|++++++++++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-CCeeeEEEecCCCHHHHHHHHHH
Confidence 478999999999999999999999999 9999999998888887777543 56889999999999999888765
Q ss_pred ----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|+||||||.....++.+.+.+++++++++|+.++++++++++|+|++++ .++||++||..+..
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~------ 150 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH---SGHIFFITSVAATK------ 150 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS------
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CCEEEEEecchhcC------
Confidence 57999999999998778888899999999999999999999999999998765 68999999998876
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++++++++.|+.++||+||+|+||+++|++..
T Consensus 151 ----------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 197 (244)
T 2bd0_A 151 ----------------AFRHSS-----------------IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG 197 (244)
T ss_dssp ----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC
T ss_pred ----------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhh
Confidence 666666 99999999999999999999999999999999999999864
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
.... +. ..++..|+|++..++|++ ++.+.+++|+++..|+|.
T Consensus 198 ~~~~------------------~~----------~~~~~~~~dva~~~~~l~----~~~~~~~~g~~~~~~~~~ 239 (244)
T 2bd0_A 198 KVDD------------------EM----------QALMMMPEDIAAPVVQAY----LQPSRTVVEEIILRPTSG 239 (244)
T ss_dssp CCCS------------------TT----------GGGSBCHHHHHHHHHHHH----TSCTTEEEEEEEEEETTC
T ss_pred hccc------------------cc----------cccCCCHHHHHHHHHHHH----hCCccccchheEEecccc
Confidence 3210 00 125778888888899999 888888888888877764
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=294.87 Aligned_cols=235 Identities=15% Similarity=0.041 Sum_probs=191.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCchhHH------------HHHHHHHhhcCCeEEEEEecCCCHH
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAK-EGARVSILARSGKKLE------------EAKQSIQLATGIEVATYSADVRDFD 100 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~-~G~~V~l~~r~~~~~~------------~~~~~l~~~~~~~v~~~~~Dls~~~ 100 (366)
.-.+|++|||||++|||+++|+.|++ +|++|++++|+.+..+ ...+++.. .+.++..+.+|++|++
T Consensus 44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-~G~~a~~i~~Dvtd~~ 122 (405)
T 3zu3_A 44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-KGLYAKSINGDAFSDE 122 (405)
T ss_dssp TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHH
T ss_pred CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-cCCceEEEECCCCCHH
Confidence 45799999999999999999999999 9999999998765432 12233333 3678899999999999
Q ss_pred HHHHHHHh----cCCCcEEEEcCCCC-------------CCCCc---------------------cCCCHHHHHHHHHHH
Q 017757 101 AVKTALDE----AGPVDVLVVNQGVF-------------VPGEL---------------------EVQSLDEVRLMIDVN 142 (366)
Q Consensus 101 ~v~~~~~~----~~~id~vi~nAG~~-------------~~~~~---------------------~~~~~~~~~~~~~vN 142 (366)
++++++++ +|++|+||||||.. ...++ .+.+.++|++++++|
T Consensus 123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn 202 (405)
T 3zu3_A 123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM 202 (405)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence 98888765 69999999999974 22344 678999999999999
Q ss_pred HHHHH-HHHHHHHHH-HHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc--ccccccccccccc
Q 017757 143 ITGSF-HMIKAALPL-IKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY--HVTSWRELSGQFC 218 (366)
Q Consensus 143 ~~~~~-~l~~~~~~~-l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 218 (366)
..+.+ ++++++.+. |.+ + .|+||++||+.+.. +.+.+ .
T Consensus 203 ~~~~~~~~~~~~~~~~m~~-~---gG~IVniSSi~~~~----------------------~~p~~~~~------------ 244 (405)
T 3zu3_A 203 GGEDWQMWIDALLDAGVLA-E---GAQTTAFTYLGEKI----------------------THDIYWNG------------ 244 (405)
T ss_dssp SSHHHHHHHHHHHHHTCEE-E---EEEEEEEECCCCGG----------------------GTTTTTTS------------
T ss_pred chhHHHHHHHHHHHHhhhh-C---CcEEEEEeCchhhC----------------------cCCCccch------------
Confidence 99998 788887754 443 2 48999999999887 66666 6
Q ss_pred ccccchhhhhHHHHHHHHHHHHhHhccC-CcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhh
Q 017757 219 LLGTLLWIASKFGLRGLAEALQQEVIAD-DIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGI 297 (366)
Q Consensus 219 ~~~~~~Y~asKaal~~l~~~la~e~~~~-gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 297 (366)
.|++||+|+.+|+++||.|++++ |||||+|+||.++|++..... ..|... ..+..
T Consensus 245 -----aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip----------------~~p~y~--~~l~~- 300 (405)
T 3zu3_A 245 -----SIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIP----------------MMPLYL--SLLFK- 300 (405)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTST----------------THHHHH--HHHHH-
T ss_pred -----HHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCC----------------CCcHHH--HHHHH-
Confidence 99999999999999999999999 999999999999999765431 112222 12222
Q ss_pred hCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 298 KSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 298 ~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
+++|.++++|+++.+.||+ |+ +++|+.+++|++.
T Consensus 301 ~mkr~G~~Ed~a~~i~~L~----sd---~l~~~~~~~D~~~ 334 (405)
T 3zu3_A 301 VMKEKGTHEGCIEQVYSLY----KD---SLCGDSPHMDQEG 334 (405)
T ss_dssp HHHHHTCCCCHHHHHHHHH----HH---TTSSSCCCBCTTS
T ss_pred HHhcCCCcHHHHHHHHHHH----hc---cccCCCCCcCCCc
Confidence 6899999999999999999 55 7888888899874
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=290.58 Aligned_cols=229 Identities=25% Similarity=0.326 Sum_probs=192.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe---------cCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA---------RSGKKLEEAKQSIQLATGIEVATYSADVRDFDAV 102 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~---------r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v 102 (366)
.++++||++|||||++|||+++|++|+++|++|++++ |+.++++++.+++... +.. ..+|+++.+++
T Consensus 4 ~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-~~~---~~~D~~~~~~~ 79 (319)
T 1gz6_A 4 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-GGK---AVANYDSVEAG 79 (319)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-TCE---EEEECCCGGGH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-CCe---EEEeCCCHHHH
Confidence 3678999999999999999999999999999999974 4677777777777654 323 24799999877
Q ss_pred HHHHH----hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 103 KTALD----EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 103 ~~~~~----~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
+++++ +++++|+||||||+....++.+.+.++|+.++++|+.|+++++++++|+|++++ .++||++||..+..
T Consensus 80 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~---~grIV~vsS~~~~~ 156 (319)
T 1gz6_A 80 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN---YGRIIMTASASGIY 156 (319)
T ss_dssp HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CCEEEEECChhhcc
Confidence 76654 468999999999998777788899999999999999999999999999999875 68999999988876
Q ss_pred ccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
+.++.. .|++||+|+.+|+++++.|++++||+||+|+||.+
T Consensus 157 ----------------------~~~~~~-----------------~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 157 ----------------------GNFGQA-----------------NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp ----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred ----------------------CCCCCH-----------------HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 555666 99999999999999999999999999999999998
Q ss_pred CCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 259 ETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 259 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
|++.... .+ ++.. +...|+|++..++||+ ++. .++||+.+.+|||+
T Consensus 198 -t~~~~~~-----------------~~-~~~~----------~~~~p~dvA~~~~~l~----s~~-~~~tG~~~~v~GG~ 243 (319)
T 1gz6_A 198 -SRMTETV-----------------MP-EDLV----------EALKPEYVAPLVLWLC----HES-CEENGGLFEVGAGW 243 (319)
T ss_dssp -STTTGGG-----------------SC-HHHH----------HHSCGGGTHHHHHHHT----STT-CCCCSCEEEEETTE
T ss_pred -ccccccc-----------------CC-hhhh----------ccCCHHHHHHHHHHHh----Cch-hhcCCCEEEECCCe
Confidence 8765431 01 1111 1357999999999998 663 47899999999997
Q ss_pred HH
Q 017757 339 IR 340 (366)
Q Consensus 339 ~~ 340 (366)
..
T Consensus 244 ~~ 245 (319)
T 1gz6_A 244 IG 245 (319)
T ss_dssp EE
T ss_pred EE
Confidence 53
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=282.32 Aligned_cols=219 Identities=16% Similarity=0.107 Sum_probs=185.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c-
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A- 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~- 109 (366)
|++|++|||||++|||++++++|+++|++|++++|+.++.+ ....++.+|++|++++++++++ +
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 69 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQ 69 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999999999999999876532 2456789999999999888765 4
Q ss_pred -CCCcEEEEcCCCCCCCCc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 110 -GPVDVLVVNQGVFVPGEL-EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 110 -~~id~vi~nAG~~~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
+++|+||||||.....++ .+.+.++|++++++|+.++++++++++|+|++ .++||++||..+..
T Consensus 70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~--------- 135 (236)
T 1ooe_A 70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-----GGLLQLTGAAAAMG--------- 135 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCGGGGS---------
T ss_pred CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-----CCEEEEECchhhcc---------
Confidence 699999999998777676 77889999999999999999999999999965 47999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc--cCCcEEEEEcCCCCCCCChhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+++|+++++.|++ ++||+||+|+||+++|++.+.
T Consensus 136 -------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~ 185 (236)
T 1ooe_A 136 -------------PTPSMI-----------------GYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK 185 (236)
T ss_dssp -------------CCTTBH-----------------HHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH
T ss_pred -------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhh
Confidence 666667 999999999999999999998 999999999999999998654
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHH-HHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLL-SIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~-~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... ...+...++|++..++ +|+ ++++.++||+.+.+|||..
T Consensus 186 ~~~~~---------------------------~~~~~~~~~dvA~~i~~~l~----s~~~~~~~G~~~~v~gg~~ 229 (236)
T 1ooe_A 186 WMPNA---------------------------DHSSWTPLSFISEHLLKWTT----ETSSRPSSGALLKITTENG 229 (236)
T ss_dssp HSTTC---------------------------CGGGCBCHHHHHHHHHHHHH----CGGGCCCTTCEEEEEEETT
T ss_pred cCCCc---------------------------cccccCCHHHHHHHHHHHHc----CCCcccccccEEEEecCCC
Confidence 31110 0123345677777776 777 8899999999999999854
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=281.50 Aligned_cols=257 Identities=20% Similarity=0.192 Sum_probs=184.4
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH-HHHHHHHHh-
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF-DAVKTALDE- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~-~~v~~~~~~- 108 (366)
+...+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|++|+ +++++++++
T Consensus 6 ~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 6 PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp ------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999999999999999877667899999999998 888887765
Q ss_pred ---cCCCcEEEEcCCCCCC------------------------------CCccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 109 ---AGPVDVLVVNQGVFVP------------------------------GELEVQSLDEVRLMIDVNITGSFHMIKAALP 155 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~------------------------------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 155 (366)
++++|+||||||+... ..+.+.+.+++++++++|+.|+++++++++|
T Consensus 86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 165 (311)
T 3o26_A 86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP 165 (311)
T ss_dssp HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence 5899999999998743 2445678999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEecCCccccccccccC-------ccCccccccccccCCCCCCccccccccccccccc-cccchhhh
Q 017757 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTN-------MKGINENKLCESSGKGHGGYHVTSWRELSGQFCL-LGTLLWIA 227 (366)
Q Consensus 156 ~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~a 227 (366)
+|++++ .++||++||.++......... ...++........ ...............++ ++...|++
T Consensus 166 ~l~~~~---~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~ 238 (311)
T 3o26_A 166 LLQLSD---SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVV----NMLLKDFKENLIETNGWPSFGAAYTT 238 (311)
T ss_dssp HHTTSS---SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHH----HHHHHHHHTTCTTTTTCCSSCHHHHH
T ss_pred hhccCC---CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHH----HHHHhhhhccccccccCcccchhhHH
Confidence 998865 689999999988652211000 0000000000000 00000000000000011 12238999
Q ss_pred hHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCC
Q 017757 228 SKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCN 307 (366)
Q Consensus 228 sKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~ 307 (366)
||+|+++++++++.|+.+ |+||+|+||+|+|++.... ...++++.++.++..... +++
T Consensus 239 SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~---------------~~~~~~~~a~~~~~~~~~-----~~~ 296 (311)
T 3o26_A 239 SKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGI---------------GNYTAEEGAEHVVRIALF-----PDD 296 (311)
T ss_dssp HHHHHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTTC---------------CSBCHHHHHHHHHHHHTC-----CSS
T ss_pred HHHHHHHHHHHHHhhcCC--ceEEEecCCceecCCcCCC---------------CCCCHHHHHHHHHHHHhC-----CCC
Confidence 999999999999999854 9999999999999986542 135789999988876543 334
Q ss_pred chhHHHHHH
Q 017757 308 SEGFLLSIA 316 (366)
Q Consensus 308 v~~~~~~L~ 316 (366)
......|++
T Consensus 297 ~~~g~~~~~ 305 (311)
T 3o26_A 297 GPSGFFYDC 305 (311)
T ss_dssp CCCSCEETC
T ss_pred CCCceEecc
Confidence 444455555
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-37 Score=296.35 Aligned_cols=238 Identities=15% Similarity=-0.007 Sum_probs=187.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCchhHHH------------HHHHHHhhcCCeEEEEEecCCCH
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAK-EGARVSILARSGKKLEE------------AKQSIQLATGIEVATYSADVRDF 99 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~-~G~~V~l~~r~~~~~~~------------~~~~l~~~~~~~v~~~~~Dls~~ 99 (366)
..-.+|++|||||++|||+++|+.|++ +|++|++++|+.+.+++ ..+++.. .+.++..+.+|++|+
T Consensus 57 ~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-~G~~a~~i~~Dvtd~ 135 (422)
T 3s8m_A 57 RNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-AGLYSKSINGDAFSD 135 (422)
T ss_dssp CSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSH
T ss_pred cccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh-cCCcEEEEEecCCCH
Confidence 334599999999999999999999999 99999999998765332 2234443 367889999999999
Q ss_pred HHHHHHHHh----c-CCCcEEEEcCCCC-------------CCCCc---------------------cCCCHHHHHHHHH
Q 017757 100 DAVKTALDE----A-GPVDVLVVNQGVF-------------VPGEL---------------------EVQSLDEVRLMID 140 (366)
Q Consensus 100 ~~v~~~~~~----~-~~id~vi~nAG~~-------------~~~~~---------------------~~~~~~~~~~~~~ 140 (366)
+++++++++ + |++|+||||||.. ...++ .+.+.++|+++++
T Consensus 136 ~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~ 215 (422)
T 3s8m_A 136 AARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTIT 215 (422)
T ss_dssp HHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHH
Confidence 998887754 7 9999999999972 22333 3679999999999
Q ss_pred HHHHHHH-HHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc--cccccccccccc
Q 017757 141 VNITGSF-HMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY--HVTSWRELSGQF 217 (366)
Q Consensus 141 vN~~~~~-~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 217 (366)
+|..+.+ .+++++.+.+...+ .|+||++||+++.. +.|.+ .
T Consensus 216 Vn~~~~~~~~~~a~~~~~m~~~---gG~IVniSSi~g~~----------------------~~p~~~~~----------- 259 (422)
T 3s8m_A 216 VMGGQDWELWIDALEGAGVLAD---GARSVAFSYIGTEI----------------------TWPIYWHG----------- 259 (422)
T ss_dssp HHSSHHHHHHHHHHHHTTCEEE---EEEEEEEEECCCGG----------------------GHHHHTSH-----------
T ss_pred hhchhHHHHHHHHHHHHHHhhC---CCEEEEEeCchhhc----------------------cCCCccch-----------
Confidence 9999998 78888776433333 48999999999876 55555 5
Q ss_pred cccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhh
Q 017757 218 CLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGI 297 (366)
Q Consensus 218 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 297 (366)
.|++||+|+.+|+++||.|++++|||||+|+||+|+|++...... .|.... ....
T Consensus 260 ------aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~----------------~~~~~~---~~~~ 314 (422)
T 3s8m_A 260 ------ALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPV----------------MPLYIS---MVYK 314 (422)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTH----------------HHHHHH---HHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCC----------------ChHHHH---HHHh
Confidence 899999999999999999999999999999999999998765321 122211 1123
Q ss_pred hCCCeEeeCCchhHHHHHHhcCCCCchhHHH-HHHHHHHHH
Q 017757 298 KSGSFIVPCNSEGFLLSIATAGLSPQRSVLM-AFVEVVAAG 337 (366)
Q Consensus 298 ~~gr~~~~~~v~~~~~~L~~~~~s~~~~~it-G~~i~~dgG 337 (366)
+++|.++|+|+++.+.||+ |+.- |.+ |++..+|++
T Consensus 315 ~m~r~G~pEdva~~v~~L~----sd~l-y~~~~~~~~~d~~ 350 (422)
T 3s8m_A 315 IMKEKGLHEGTIEQLDRLF----RERL-YRQDGQPAEVDEQ 350 (422)
T ss_dssp HHHHTTCCCCHHHHHHHHH----HHTT-TCTTCCCCCCCTT
T ss_pred hhcCCcChHHHHHHHHHHh----cchh-hccCCCCcccCCC
Confidence 7899999999999999999 6644 554 554436665
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=270.43 Aligned_cols=218 Identities=23% Similarity=0.326 Sum_probs=190.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+++++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++... +.++.++.+|++|++++++++++
T Consensus 26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-CCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999999998888888777654 56899999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||.....++.+.+.+++++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus 105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~--------- 172 (272)
T 1yb1_A 105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN---HGHIVTVASAAGHV--------- 172 (272)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCCC-CC---------
T ss_pred HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---CCEEEEEechhhcC---------
Confidence 57999999999998777888889999999999999999999999999998865 68999999998876
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc---cCCcEEEEEcCCCCCCCChh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI---ADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++++++++.|++ +.||+||+|+||+++|++..
T Consensus 173 -------------~~~~~~-----------------~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~ 222 (272)
T 1yb1_A 173 -------------SVPFLL-----------------AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK 222 (272)
T ss_dssp -------------CHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred -------------CCCCch-----------------hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence 545555 899999999999999999997 67999999999999999854
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCe
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSF 302 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~ 302 (366)
.. .......++|+++++.++..+..++.
T Consensus 223 ~~----------~~~~~~~~~~~dva~~i~~~~~~~~~ 250 (272)
T 1yb1_A 223 NP----------STSLGPTLEPEEVVNRLMHGILTEQK 250 (272)
T ss_dssp CT----------HHHHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred cc----------cccccCCCCHHHHHHHHHHHHHcCCC
Confidence 21 01123467999999999999988764
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=281.61 Aligned_cols=223 Identities=14% Similarity=0.131 Sum_probs=186.1
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+++...+..+|++|||||++|||+++|++|+++|++|++++|+.++.+ -..+.+|++|.++++++++
T Consensus 13 ~~~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~d~~d~~~v~~~~~ 79 (251)
T 3orf_A 13 GLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------------DHSFTIKDSGEEEIKSVIE 79 (251)
T ss_dssp ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------------SEEEECSCSSHHHHHHHHH
T ss_pred cccccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------ccceEEEeCCHHHHHHHHH
Confidence 344555667999999999999999999999999999999999986532 1357899999999998887
Q ss_pred h----cCCCcEEEEcCCCCCCCC-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
+ ++++|++|||||+..... +.+.+.+++++++++|+.++++++++++|.|++ .++||++||..+..
T Consensus 80 ~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~isS~~~~~---- 150 (251)
T 3orf_A 80 KINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-----GGLFVLTGASAALN---- 150 (251)
T ss_dssp HHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCGGGGS----
T ss_pred HHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-----CCEEEEEechhhcc----
Confidence 6 479999999999876654 677889999999999999999999999999976 47999999999887
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc--cCCcEEEEEcCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTET 260 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~Vn~V~PG~v~T 260 (366)
+.++.. .|++||+|+++++++++.|++ ++||+||+|+||+|+|
T Consensus 151 ------------------~~~~~~-----------------~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t 195 (251)
T 3orf_A 151 ------------------RTSGMI-----------------AYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDT 195 (251)
T ss_dssp ------------------CCTTBH-----------------HHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCC
T ss_pred ------------------CCCCCc-----------------hhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcC
Confidence 777777 999999999999999999987 8999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCC-chhHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSP-QRSVLMAFVEVVAAGL 338 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~-~~~~itG~~i~~dgG~ 338 (366)
++.+..... .+.+++..++|++..++||+ ++ .+.++||+.+.+++|.
T Consensus 196 ~~~~~~~~~---------------------------~~~~~~~~~~dva~~i~~l~----~~~~~~~~tG~~i~v~~g~ 243 (251)
T 3orf_A 196 PTNRKYMSD---------------------------ANFDDWTPLSEVAEKLFEWS----TNSDSRPTNGSLVKFETKS 243 (251)
T ss_dssp HHHHHHCTT---------------------------SCGGGSBCHHHHHHHHHHHH----HCGGGCCCTTCEEEEEEET
T ss_pred cchhhhccc---------------------------ccccccCCHHHHHHHHHHHh----cCccccCCcceEEEEecCC
Confidence 986653221 13456778888999999999 77 8899999998887663
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=271.54 Aligned_cols=222 Identities=28% Similarity=0.351 Sum_probs=178.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+..+|+++||||++|||++++++|+++|++|++++|+.+++++..+++. ++.++.+|++|.+++++++++ +
T Consensus 2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (234)
T 2ehd_A 2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-----GALPLPGDVREEGDWARAVAAMEEAF 76 (234)
T ss_dssp --CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----hceEEEecCCCHHHHHHHHHHHHHHc
Confidence 3467999999999999999999999999999999999887776665542 578899999999999888765 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.+++++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus 77 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~----------- 142 (234)
T 2ehd_A 77 GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG---GGTIVNVGSLAGKN----------- 142 (234)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT---CEEEEEECCTTTTS-----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CcEEEEECCchhcC-----------
Confidence 7999999999988777888899999999999999999999999999998865 68999999998876
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+++++++++.|++++||+||+|+||+++|++.....
T Consensus 143 -----------~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-- 192 (234)
T 2ehd_A 143 -----------PFKGGA-----------------AYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP-- 192 (234)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------
T ss_pred -----------CCCCCc-----------------hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc--
Confidence 556666 99999999999999999999999999999999999999754310
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAA 336 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dg 336 (366)
+.. +...|+|++..+.|++ ++.+.+++|+.+..++
T Consensus 193 -----------------~~~-----------~~~~~~dvA~~~~~l~----~~~~~~~~g~~~~~~~ 227 (234)
T 2ehd_A 193 -----------------GQA-----------WKLKPEDVAQAVLFAL----EMPGHAMVSEIELRPT 227 (234)
T ss_dssp ---------------------------------CCHHHHHHHHHHHH----HSCCSSCCCEEECCC-
T ss_pred -----------------ccc-----------CCCCHHHHHHHHHHHh----CCCcccccceEEEeec
Confidence 000 0346777778888888 7777777777654433
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=284.68 Aligned_cols=246 Identities=19% Similarity=0.170 Sum_probs=176.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~vi 116 (366)
|++|||||++|||+++|++|+++|++|++++|+.++++. .+++|++|.++++++++++ +++|+||
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~~~~Dl~~~~~v~~~~~~~~~~id~lv 67 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------DLSTAEGRKQAIADVLAKCSKGMDGLV 67 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------ccccCCCCHHHHHHHHHHhCCCCCEEE
Confidence 689999999999999999999999999999998765321 1678999999999999998 8999999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
||||...+. +.+++++++|+.++++++++++|+|++++ .++||++||..+...+...............+
T Consensus 68 ~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~ 137 (257)
T 1fjh_A 68 LCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGH---QPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp ECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS---SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred ECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC---CcEEEEECChhhhccccccchhhhhhcccchh
Confidence 999976421 12889999999999999999999998865 58999999998873111000000000000000
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhh
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSI 276 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~ 276 (366)
.. ........+.++...|++||+|+++++++++.|++++||+||+|+||+++|++.+....
T Consensus 138 ~~-----------~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------- 198 (257)
T 1fjh_A 138 KA-----------RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ-------- 198 (257)
T ss_dssp HH-----------HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------
T ss_pred hh-----------hhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc--------
Confidence 00 00000001122334999999999999999999999999999999999999998654211
Q ss_pred hhccCCCCCHHHHHHHHHh--hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 277 IAASSGAMKADEVAKKALD--GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 277 ~~~~~~~~~~~~~a~~~~~--~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+...+.... ..+.+++..|+|++..++||+ ++.++++||+.+.+|||++.
T Consensus 199 ----------~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~----~~~~~~~tG~~~~vdgG~~~ 250 (257)
T 1fjh_A 199 ----------DPRYGESIAKFVPPMGRRAEPSEMASVIAFLM----SPAASYVHGAQIVIDGGIDA 250 (257)
T ss_dssp --------------------CCCSTTSCCCTHHHHHHHHHHT----SGGGTTCCSCEEEESTTHHH
T ss_pred ----------chhHHHHHHhcccccCCCCCHHHHHHHHHHHh----CchhcCCcCCEEEECCCccc
Confidence 001111122 456788999999999999999 88899999999999999864
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=266.50 Aligned_cols=237 Identities=21% Similarity=0.254 Sum_probs=192.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++.+|++|++++++++++
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999988888887776543 25788999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||......+.+.+.++|++++++|+.+++++++.++|.|++++. ..++||++||..+...
T Consensus 108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~-~~g~iv~isS~~~~~~-------- 178 (279)
T 1xg5_A 108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV-DDGHIININSMSGHRV-------- 178 (279)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-CSCEEEEECCGGGTSC--------
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CCceEEEEcChhhccc--------
Confidence 578999999999988788888999999999999999999999999999987641 1279999999887620
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc--cCCcEEEEEcCCCCCCCChhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
.+.+... .|++||+|+++++++++.|+. +.||+||+|+||+++|++...
T Consensus 179 ------------~~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~ 229 (279)
T 1xg5_A 179 ------------LPLSVTH-----------------FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK 229 (279)
T ss_dssp ------------CSCGGGH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH
T ss_pred ------------CCCCCCc-----------------hhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh
Confidence 0333444 899999999999999999998 889999999999999997543
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAF 330 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~ 330 (366)
.... .++.. ....+.+++..++|++..++|++ ++...+.+|+
T Consensus 230 ~~~~---------------~~~~~----~~~~~~~~~~~~~dvA~~i~~l~----~~~~~~~~g~ 271 (279)
T 1xg5_A 230 LHDK---------------DPEKA----AATYEQMKCLKPEDVAEAVIYVL----STPAHIQIGD 271 (279)
T ss_dssp HTTT---------------CHHHH----HHHHC---CBCHHHHHHHHHHHH----HSCTTEEEEE
T ss_pred hccc---------------ChhHH----hhhcccccCCCHHHHHHHHHHHh----cCCcceEeee
Confidence 2110 12222 22334567888999999999998 5555555443
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-37 Score=314.49 Aligned_cols=235 Identities=25% Similarity=0.292 Sum_probs=186.4
Q ss_pred cCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec---------CchhHHHHHHHHHhhcCCeEEEEEecCC
Q 017757 27 RPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR---------SGKKLEEAKQSIQLATGIEVATYSADVR 97 (366)
Q Consensus 27 ~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r---------~~~~~~~~~~~l~~~~~~~v~~~~~Dls 97 (366)
.++...++++||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++... +..+ .+|++
T Consensus 9 ~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~-~~~~---~~D~~ 84 (613)
T 3oml_A 9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA-GGEA---VADYN 84 (613)
T ss_dssp ------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT-TCCE---EECCC
T ss_pred cCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh-CCeE---EEEeC
Confidence 4556678899999999999999999999999999999999988 777788888888765 3333 37999
Q ss_pred CHHHHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 98 DFDAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 98 ~~~~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
|.+++++++++ ++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||
T Consensus 85 d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~---~g~IV~isS 161 (613)
T 3oml_A 85 SVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN---YGRIIMTSS 161 (613)
T ss_dssp CGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEECC
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCEEEEECC
Confidence 99888877765 58999999999999888899999999999999999999999999999999876 689999999
Q ss_pred CccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEE
Q 017757 174 QAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLI 253 (366)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V 253 (366)
.++.. +.++.. .|++||+|+.+|+++++.|++++||+||+|
T Consensus 162 ~a~~~----------------------~~~~~~-----------------~Y~asKaal~~lt~~la~e~~~~gI~vn~v 202 (613)
T 3oml_A 162 NSGIY----------------------GNFGQV-----------------NYTAAKMGLIGLANTVAIEGARNNVLCNVI 202 (613)
T ss_dssp HHHHH----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred HHHcC----------------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHhCccCeEEEEE
Confidence 99887 777777 999999999999999999999999999999
Q ss_pred cCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 254 FPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 254 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
+||.+ |++.... . +++. .+...|+|++..++||+ |+. .++||+.+.
T Consensus 203 ~Pg~~-t~~~~~~-----------------~-~~~~----------~~~~~pedvA~~v~~L~----s~~-~~~tG~~i~ 248 (613)
T 3oml_A 203 VPTAA-SRMTEGI-----------------L-PDIL----------FNELKPKLIAPVVAYLC----HES-CEDNGSYIE 248 (613)
T ss_dssp EEC-------CCC-----------------C-CHHH----------HTTCCGGGTHHHHHHTT----STT-CCCCSCEEE
T ss_pred ECCCC-Chhhhhc-----------------c-chhh----------hhcCCHHHHHHHHHHhc----CCC-cCCCceEEE
Confidence 99975 5544321 1 1211 12348999999999999 888 899999999
Q ss_pred HHHHHHHH
Q 017757 334 VAAGLIRF 341 (366)
Q Consensus 334 ~dgG~~~~ 341 (366)
+|||++.-
T Consensus 249 vdGG~~~~ 256 (613)
T 3oml_A 249 SAAGWATK 256 (613)
T ss_dssp EETTEEEE
T ss_pred ECCCeEEE
Confidence 99998754
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=274.02 Aligned_cols=227 Identities=23% Similarity=0.278 Sum_probs=191.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---cCCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---AGPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---~~~i 112 (366)
++|++|||||++|||++++++|+++|++|++++|+.+ . .++.++++|++|++++++++++ ++++
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 3789999999999999999999999999999999875 1 1347899999999999888765 4789
Q ss_pred cEEEEcCCCCCCCCccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCCcEEEEecCCccccccccccC
Q 017757 113 DVLVVNQGVFVPGELEVQ----SLDEVRLMIDVNITGSFHMIKAALPLIKKRQ---NGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~----~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~---~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
|++|||||......+.+. +.+++++++++|+.++++++++++|.|++++ .+..++||++||..+..
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------- 140 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE------- 140 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH-------
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-------
Confidence 999999998776655554 4559999999999999999999999998764 22245999999998876
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|++.++++++.|++++||+||+|+||+++|++...
T Consensus 141 ---------------~~~~~~-----------------~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 188 (242)
T 1uay_A 141 ---------------GQIGQA-----------------AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG 188 (242)
T ss_dssp ---------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT
T ss_pred ---------------CCCCCc-----------------hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc
Confidence 666666 999999999999999999999999999999999999997653
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhC-CCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKS-GSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~-gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
. +++..+.+....+. +++..++|++..++||+ ++ .+++|+.+.+|||++
T Consensus 189 ~-------------------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~----~~--~~~~G~~~~v~gG~~ 238 (242)
T 1uay_A 189 L-------------------PEKAKASLAAQVPFPPRLGRPEEYAALVLHIL----EN--PMLNGEVVRLDGALR 238 (242)
T ss_dssp S-------------------CHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHH----HC--TTCCSCEEEESTTCC
T ss_pred c-------------------chhHHHHHHhhCCCcccCCCHHHHHHHHHHHh----cC--CCCCCcEEEEcCCee
Confidence 1 12333445556677 88999999999999999 65 789999999999974
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-36 Score=283.76 Aligned_cols=248 Identities=27% Similarity=0.299 Sum_probs=189.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-----cCCeEEEEEecCCCHHHHHHHHHhc-
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-----TGIEVATYSADVRDFDAVKTALDEA- 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-----~~~~v~~~~~Dls~~~~v~~~~~~~- 109 (366)
++|++|||||++|||+++|++|+++|++|++++|+..++++..+.+... .+.++.++.+|++|++++++++++.
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 4789999999999999999999999999999988766555444443322 1457899999999999999999874
Q ss_pred -CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 -GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 -~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||.++..
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~---~g~IV~isS~~~~~---------- 147 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG---SGRVLVTGSVGGLM---------- 147 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEEEEGGGTS----------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCEEEEECCccccc----------
Confidence 7899999999988777888899999999999999999999999999998765 68999999998876
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.+... .|++||+|+++|+++++.|++++||+||+|+||+|+|++......
T Consensus 148 ------------~~~~~~-----------------~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~ 198 (327)
T 1jtv_A 148 ------------GLPFND-----------------VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLG 198 (327)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------C
T ss_pred ------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhh
Confidence 666666 999999999999999999999999999999999999998754321
Q ss_pred cCCcchhhhhccCCCCCHH--HHHHHHHhh--hhCCCe-EeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKAD--EVAKKALDG--IKSGSF-IVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~--~~a~~~~~~--i~~gr~-~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
.. ..... ..+++ +..+.+... .+.+++ ..|+|++..++|++.. ..+.++|+||+.+.
T Consensus 199 ~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~-~~~~~~~~tg~~~~ 260 (327)
T 1jtv_A 199 SP---EEVLD----RTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRA-PKPTLRYFTTERFL 260 (327)
T ss_dssp CH---HHHHH----TSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHC-SSCCSEEESCSTTH
T ss_pred cc---hhhhc----cCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcC-CCCCeEEEeCchHH
Confidence 10 00000 00111 111111111 123444 4799999999999822 12567889987754
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=276.93 Aligned_cols=233 Identities=19% Similarity=0.207 Sum_probs=185.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCH-HHHHHHHHh-
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDF-DAVKTALDE- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~-~~v~~~~~~- 108 (366)
|+++||+++||||++|||+++|++|+++|++ |++++|+.+. +..+++.... +.++.++.+|++|+ +++++++++
T Consensus 1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence 4689999999999999999999999999997 9999998742 2233333332 45789999999998 888877765
Q ss_pred ---cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 ---~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|+||||||.. +.+++++++++|+.++++++++++|.|++++.+..++||++||.++..
T Consensus 79 ~~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~------- 143 (254)
T 1sby_A 79 FDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN------- 143 (254)
T ss_dssp HHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-------
T ss_pred HHhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc-------
Confidence 58999999999974 456789999999999999999999999876433358999999998876
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+++++++++.++.++||+||+|+||+++|++...
T Consensus 144 ---------------~~~~~~-----------------~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~ 191 (254)
T 1sby_A 144 ---------------AIHQVP-----------------VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT 191 (254)
T ss_dssp ---------------CCTTSH-----------------HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred ---------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc
Confidence 666666 999999999999999999998889999999999999997653
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
...... ..+.. .... ....+..|+|++..+++++ + .+++|+.+.+|||+
T Consensus 192 ~~~~~~-------------~~~~~-~~~~---~~~~~~~~~dvA~~i~~~~----~---~~~~G~~~~v~gG~ 240 (254)
T 1sby_A 192 FNSWLD-------------VEPRV-AELL---LSHPTQTSEQCGQNFVKAI----E---ANKNGAIWKLDLGT 240 (254)
T ss_dssp CCCGGG-------------SCTTH-HHHH---TTSCCEEHHHHHHHHHHHH----H---HCCTTCEEEEETTE
T ss_pred cchhhh-------------hhHHH-HHHH---hcCCCCCHHHHHHHHHHHH----H---cCCCCCEEEEeCCc
Confidence 211000 00111 1122 2234568999999999988 3 56789999999996
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=268.18 Aligned_cols=229 Identities=21% Similarity=0.207 Sum_probs=178.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|++|+++||||++|||++++++|+++| ++|++++|+.++++++.+ + .+.++.++.+|++|++++++++++
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I---KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C---CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c---cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999 999999999887765432 2 256789999999999999888875
Q ss_pred cC--CCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cC--CCCcEEEEecCCccc
Q 017757 109 AG--PVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKR------QN--GGPASIALMSSQAGQ 177 (366)
Q Consensus 109 ~~--~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~------~~--~~~g~iv~vsS~~~~ 177 (366)
++ ++|++|||||... ..++.+.+.+++++++++|+.++++++++++|.|+++ +. +..++||++||..+.
T Consensus 77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 35 8999999999887 6777888999999999999999999999999999875 20 114799999999876
Q ss_pred cccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 178 CWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
...... .+..++.. .|++||+|+++++++++.|++++||+||+|+||+
T Consensus 157 ~~~~~~---------------~~~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~ 204 (250)
T 1yo6_A 157 ITDNTS---------------GSAQFPVL-----------------AYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGW 204 (250)
T ss_dssp STTCCS---------------TTSSSCBH-----------------HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCC
T ss_pred cCCccc---------------ccccCCcc-----------------HHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCc
Confidence 510000 00113334 8999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
++|++... .+...++|++..+++++ ++...+++|+.+.+|||
T Consensus 205 v~t~~~~~----------------------------------~~~~~~~~~a~~~~~~~----~~~~~~~~G~~~~~~g~ 246 (250)
T 1yo6_A 205 VQTNLGGK----------------------------------NAALTVEQSTAELISSF----NKLDNSHNGRFFMRNLK 246 (250)
T ss_dssp C-----------------------------------------------HHHHHHHHHHH----TTCCGGGTTCEEETTEE
T ss_pred eecCCCCC----------------------------------CCCCCHHHHHHHHHHHH----hcccccCCCeEEEECCc
Confidence 99997532 12345666677777777 66677788888888876
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=263.57 Aligned_cols=221 Identities=24% Similarity=0.266 Sum_probs=187.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
..+++||+++||||+||||++++++|+++|++|++++|+.+++++..+++....+.++.++.+|++|.+++++++++
T Consensus 23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999999999999999999988888887766455899999999999999888765
Q ss_pred -cCCCcEEEEc-CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -AGPVDVLVVN-QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~~~id~vi~n-AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++||| ||... ..+.+.+.+++++++++|+.|+++++++++|.|+++ .++||++||.++..
T Consensus 103 ~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~----~g~iv~isS~~~~~-------- 169 (286)
T 1xu9_A 103 LMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS----NGSIVVVSSLAGKV-------- 169 (286)
T ss_dssp HHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEEEEGGGTS--------
T ss_pred HcCCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC----CCEEEEECCccccc--------
Confidence 5799999999 56543 345567999999999999999999999999999764 47999999998876
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHh--ccCCcEEEEEcCCCCCCCChh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~--~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+++++++++.|+ ...||+|++|+||+++|++..
T Consensus 170 --------------~~~~~~-----------------~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~ 218 (286)
T 1xu9_A 170 --------------AYPMVA-----------------AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM 218 (286)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH
T ss_pred --------------CCCCcc-----------------HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH
Confidence 666666 99999999999999999999 678999999999999999875
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEe
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIV 304 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~ 304 (366)
...... .....++|+++|+.++..+..++...
T Consensus 219 ~~~~~~--------~~~~~~~~~~vA~~i~~~~~~~~~~~ 250 (286)
T 1xu9_A 219 KAVSGI--------VHMQAAPKEECALEIIKGGALRQEEV 250 (286)
T ss_dssp HHSCGG--------GGGGCBCHHHHHHHHHHHHHTTCSEE
T ss_pred Hhcccc--------ccCCCCCHHHHHHHHHHHHhcCCceE
Confidence 432110 01235799999999999987765433
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-35 Score=266.26 Aligned_cols=184 Identities=26% Similarity=0.372 Sum_probs=135.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHH---HHHHhc
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVK---TALDEA 109 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~---~~~~~~ 109 (366)
|++++|++|||||++|||+++|++|++ |++|++++|+.+++++..+ ..++.++.+|+++.++.+ +.++++
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE------IEGVEPIESDIVKEVLEEGGVDKLKNL 73 (245)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT------STTEEEEECCHHHHHHTSSSCGGGTTC
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh------hcCCcceecccchHHHHHHHHHHHHhc
Confidence 568899999999999999999999988 9999999999887766543 235888999999987632 234456
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||......+.+.+.++|++++++|+.++++++++++|.|+++ .++||++||.++..
T Consensus 74 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~g~iv~isS~~~~~----------- 138 (245)
T 3e9n_A 74 DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA----SGCVIYINSGAGNG----------- 138 (245)
T ss_dssp SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEEC-----------------
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc----CCeEEEEcCccccc-----------
Confidence 899999999999888888889999999999999999999999999999875 37999999999887
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus 139 -----------~~~~~~-----------------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 187 (245)
T 3e9n_A 139 -----------PHPGNT-----------------IYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGL 187 (245)
T ss_dssp ---------------CH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred -----------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhh
Confidence 666677 9999999999999999999999999999999999999987654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=266.09 Aligned_cols=214 Identities=21% Similarity=0.267 Sum_probs=172.2
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCC---CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEG---ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G---~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~ 104 (366)
+.+...++++|++|||||++|||+++|++|+++| ++|++++|+.++.+.+ +++... +.++.++.+|++|.+++++
T Consensus 12 ~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~-~~~~~~~~~Dl~~~~~v~~ 89 (267)
T 1sny_A 12 SGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN-HSNIHILEIDLRNFDAYDK 89 (267)
T ss_dssp --------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH-CTTEEEEECCTTCGGGHHH
T ss_pred ccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc-CCceEEEEecCCChHHHHH
Confidence 3455677899999999999999999999999999 9999999998776543 344333 5578999999999999988
Q ss_pred HHHh----cC--CCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cC--CCCcEEE
Q 017757 105 ALDE----AG--PVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKR------QN--GGPASIA 169 (366)
Q Consensus 105 ~~~~----~~--~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~------~~--~~~g~iv 169 (366)
++++ ++ ++|+||||||... ..++.+.+.+++++++++|+.++++++++++|.|+++ +. ...++||
T Consensus 90 ~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv 169 (267)
T 1sny_A 90 LVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAII 169 (267)
T ss_dssp HHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEE
T ss_pred HHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEE
Confidence 8875 35 7999999999887 6778889999999999999999999999999999876 10 0147999
Q ss_pred EecCCccccccccccCccCccccccccccCCCC---CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccC
Q 017757 170 LMSSQAGQCWTIKNTNMKGINENKLCESSGKGH---GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD 246 (366)
Q Consensus 170 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~ 246 (366)
++||..+.. +. ++.. .|++||+|+++++++++.|++++
T Consensus 170 ~isS~~~~~----------------------~~~~~~~~~-----------------~Y~~sK~a~~~~~~~la~e~~~~ 210 (267)
T 1sny_A 170 NMSSILGSI----------------------QGNTDGGMY-----------------AYRTSKSALNAATKSLSVDLYPQ 210 (267)
T ss_dssp EECCGGGCS----------------------TTCCSCCCH-----------------HHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEecccccc----------------------cCCCCCCch-----------------HHHHHHHHHHHHHHHHHHHhhcC
Confidence 999988765 22 2344 89999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhh
Q 017757 247 DIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGI 297 (366)
Q Consensus 247 gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 297 (366)
||+||+|+||+|+|++.... ..++|+++++.++..+
T Consensus 211 gi~v~~v~Pg~v~t~~~~~~---------------~~~~~~~~a~~~~~~~ 246 (267)
T 1sny_A 211 RIMCVSLHPGWVKTDMGGSS---------------APLDVPTSTGQIVQTI 246 (267)
T ss_dssp TCEEEEECCCSBCSTTTCTT---------------CSBCHHHHHHHHHHHH
T ss_pred CcEEEEeCCcceecCCCCCC---------------CCCCHHHHHHHHHHHH
Confidence 99999999999999986421 2356777766666554
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=278.63 Aligned_cols=235 Identities=12% Similarity=-0.027 Sum_probs=188.8
Q ss_pred CCCCEEEEEcCCChhHHH--HHHHHHHCCCeEEEEecCchh------------HHHHHHHHHhhcCCeEEEEEecCCCHH
Q 017757 35 IKDRHVFITGGSSGIGLA--LAHQAAKEGARVSILARSGKK------------LEEAKQSIQLATGIEVATYSADVRDFD 100 (366)
Q Consensus 35 l~gk~vLITGas~gIG~a--ia~~L~~~G~~V~l~~r~~~~------------~~~~~~~l~~~~~~~v~~~~~Dls~~~ 100 (366)
..||++|||||++|||++ ++++|+++|++|++++|+... .+.+.+.+. ..+.++..+.+|++|++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvtd~~ 136 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KKGLVAKNFIEDAFSNE 136 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTTCHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-HcCCcEEEEEeeCCCHH
Confidence 689999999999999999 999999999999999997643 233333333 34678999999999999
Q ss_pred HHHHHHHh----cCCCcEEEEcCCCC-------------CCCCc---------------------cCCCHHHHHHHHHHH
Q 017757 101 AVKTALDE----AGPVDVLVVNQGVF-------------VPGEL---------------------EVQSLDEVRLMIDVN 142 (366)
Q Consensus 101 ~v~~~~~~----~~~id~vi~nAG~~-------------~~~~~---------------------~~~~~~~~~~~~~vN 142 (366)
++++++++ ++++|++|||||.. ...++ .+.+.++|++++++|
T Consensus 137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn 216 (418)
T 4eue_A 137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM 216 (418)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence 99888765 58999999999974 22333 457999999999999
Q ss_pred HHHHH-HHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCc--cccccccccccccc
Q 017757 143 ITGSF-HMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY--HVTSWRELSGQFCL 219 (366)
Q Consensus 143 ~~~~~-~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 219 (366)
..+.+ .+++.+.+.+...+ .++||++||+.+.. +.|.+ .
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~---gg~IV~iSSi~~~~----------------------~~p~~~~~------------- 258 (418)
T 4eue_A 217 GGEDWQEWCEELLYEDCFSD---KATTIAYSYIGSPR----------------------TYKIYREG------------- 258 (418)
T ss_dssp SSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGG----------------------GTTTTTTS-------------
T ss_pred hHHHHHHHHHHHHHHhhhcC---CcEEEEEeCchhcC----------------------CCCccccH-------------
Confidence 99998 77888776544333 58999999999877 66666 7
Q ss_pred cccchhhhhHHHHHHHHHHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhh
Q 017757 220 LGTLLWIASKFGLRGLAEALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 220 ~~~~~Y~asKaal~~l~~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~ 298 (366)
.|++||+|+.+|+++||.|+++ +|||||+|+||.|+|++...... .|... ..+. .+
T Consensus 259 ----aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~ip~----------------~p~y~-~~~~--~~ 315 (418)
T 4eue_A 259 ----TIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAYIPT----------------FPLYA-AILY--KV 315 (418)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHTSTT----------------HHHHH-HHHH--HH
T ss_pred ----HHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhcCCC----------------CcHHH-HHHH--HH
Confidence 9999999999999999999999 99999999999999997664311 12221 1122 14
Q ss_pred CCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 299 SGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 299 ~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
+++.+.++++++.+.||+ ++ .+.+|+.+.+|||
T Consensus 316 mk~~G~~E~v~e~~~~L~----sd--~~~~g~~~~~D~~ 348 (418)
T 4eue_A 316 MKEKNIHENCIMQIERMF----SE--KIYSNEKIQFDDK 348 (418)
T ss_dssp HHHTTCCCCHHHHHHHHH----HH--TTSSSSCCCCCTT
T ss_pred HhhcCChHHHHHHHHHHh----hc--cccCCCccccCCC
Confidence 667789999999999999 55 5668888899986
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=259.26 Aligned_cols=236 Identities=20% Similarity=0.206 Sum_probs=178.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAK-EGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
.++|++|||||++|||++++++|++ +|++|++++|+.++.++..+++... +.++.++.+|++|.+++++++++ +
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-CCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999 9999999999998888888887654 56788999999999999888775 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc--c---
Q 017757 110 GPVDVLVVNQGVFVPGELEVQS-LDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK--N--- 183 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~-~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~--~--- 183 (366)
+++|+||||||....... +.+ .+++++++++|+.++++++++++|.|++ .++||++||..+...... +
T Consensus 81 g~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~~~~~~~ 154 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-----QGRVVNVSSIMSVRALKSCSPELQ 154 (276)
T ss_dssp SSEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEECCHHHHHHHHTSCHHHH
T ss_pred CCCCEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-----CCEEEEECChhhhcccccCChhHH
Confidence 789999999998755432 334 6899999999999999999999998865 369999999877641000 0
Q ss_pred --cCccCccccccc-------------cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc---
Q 017757 184 --TNMKGINENKLC-------------ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA--- 245 (366)
Q Consensus 184 --~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~--- 245 (366)
.....++..... ....++.|. ..|++||+|++.+++.++.++.+
T Consensus 155 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~Y~~sK~a~~~~~~~la~~~~~~~~ 216 (276)
T 1wma_A 155 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS------------------SAYGVTKIGVTVLSRIHARKLSEQRK 216 (276)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS------------------CHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred hhccccccchhhhhhhhhhhhhhhcccccccCCCcc------------------chhHHHHHHHHHHHHHHHHHhhcccC
Confidence 000000000000 000001111 38999999999999999999988
Q ss_pred -CCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCC-Cc
Q 017757 246 -DDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLS-PQ 323 (366)
Q Consensus 246 -~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s-~~ 323 (366)
+||+||+|+||+|+|++... .++..++|++..++||+ + +.
T Consensus 217 ~~~i~v~~v~PG~v~t~~~~~----------------------------------~~~~~~~~~a~~~~~l~----~~~~ 258 (276)
T 1wma_A 217 GDKILLNACCPGWVRTDMAGP----------------------------------KATKSPEEGAETPVYLA----LLPP 258 (276)
T ss_dssp TSCCEEEEEECCSBCSTTTCT----------------------------------TCSBCHHHHTHHHHHHH----SCCT
T ss_pred CCceEEEEecCCccccCcCCc----------------------------------cccCChhHhhhhHhhhh----cCcc
Confidence 79999999999999997532 23456666777777887 4 32
Q ss_pred -hhHHHHHHHH
Q 017757 324 -RSVLMAFVEV 333 (366)
Q Consensus 324 -~~~itG~~i~ 333 (366)
+.++||+.+.
T Consensus 259 ~~~~~~G~~~~ 269 (276)
T 1wma_A 259 DAEGPHGQFVS 269 (276)
T ss_dssp TCCCCCSCEEE
T ss_pred cccccCceEec
Confidence 3567776554
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.7e-34 Score=303.80 Aligned_cols=243 Identities=20% Similarity=0.222 Sum_probs=199.4
Q ss_pred cCCCCCcCCCCCEEEEEcCCCh-hHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHH
Q 017757 27 RPKPVRIPIKDRHVFITGGSSG-IGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDA 101 (366)
Q Consensus 27 ~~~~~~~~l~gk~vLITGas~g-IG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~ 101 (366)
......++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.... +.++.++++|++|.++
T Consensus 466 ~~a~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~es 545 (1688)
T 2pff_A 466 XXXXXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQD 545 (1688)
T ss_dssp TTSSSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTH
T ss_pred cccccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHH
Confidence 3345567899999999999998 9999999999999999998 677777777777774432 5689999999999999
Q ss_pred HHHHHHh---------cC-CCcEEEEcCCCCCCC-CccCCC--HHHHHHHHHHHHHHHHHHHHHH--HHHHHhccCCCCc
Q 017757 102 VKTALDE---------AG-PVDVLVVNQGVFVPG-ELEVQS--LDEVRLMIDVNITGSFHMIKAA--LPLIKKRQNGGPA 166 (366)
Q Consensus 102 v~~~~~~---------~~-~id~vi~nAG~~~~~-~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--~~~l~~~~~~~~g 166 (366)
+++++++ ++ ++|+||||||+.... ++.+.+ .++|++++++|+.+++.+++.+ .|.|++++ .+
T Consensus 546 VeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg---gG 622 (1688)
T 2pff_A 546 VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP---AQ 622 (1688)
T ss_dssp HHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC---EE
T ss_pred HHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC---CC
Confidence 9988875 44 799999999998777 788888 9999999999999999999998 77887654 58
Q ss_pred EEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHH-HHHHHhHhcc
Q 017757 167 SIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGL-AEALQQEVIA 245 (366)
Q Consensus 167 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l-~~~la~e~~~ 245 (366)
+||++||.++.. + +.. .|++||+|+.+| ++.++.++++
T Consensus 623 rIVnISSiAG~~----------------------G--g~s-----------------aYaASKAAL~aLttrsLAeEla~ 661 (1688)
T 2pff_A 623 VILPMSPNHGTF----------------------G--GDG-----------------MYSESKLSLETLFNRWHSESWAN 661 (1688)
T ss_dssp ECCCCCSCTTTS----------------------S--CBT-----------------THHHHHHHHTHHHHHTTTSSCTT
T ss_pred EEEEEEChHhcc----------------------C--Cch-----------------HHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999998865 3 344 899999999999 8889999988
Q ss_pred CCcEEEEEcCCCCC-CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCc-
Q 017757 246 DDIHVSLIFPPDTE-TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQ- 323 (366)
Q Consensus 246 ~gI~Vn~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~- 323 (366)
. |+||+|+||+++ |++..... . . + .....++. +.+.|+|++..++||+ ++.
T Consensus 662 ~-IRVNaVaPG~V~TT~M~~~~e-~---~-------------~----~~l~~ipl-R~~sPEEVA~aIlFLa----Sd~s 714 (1688)
T 2pff_A 662 Q-LTVCGAIIGWTRGTGLMSANN-I---I-------------A----EGIEKMGV-RTFSQKEMAFNLLGLL----TPEV 714 (1688)
T ss_dssp T-EECCCCCCCCCCCCSSSCTTT-T---C-------------S----TTTSSSSC-CCCCCCTTHHHHHHHT----STTH
T ss_pred C-eEEEEEEECcCcCCcccCCch-H---H-------------H----HHHHhCCC-CCCCHHHHHHHHHHHh----CCCc
Confidence 7 999999999999 78754310 0 0 0 00112222 5669999999999999 988
Q ss_pred hhHHHHHHHHHH--HHHHH
Q 017757 324 RSVLMAFVEVVA--AGLIR 340 (366)
Q Consensus 324 ~~~itG~~i~~d--gG~~~ 340 (366)
+.++||+.+.+| ||++.
T Consensus 715 As~ITGq~I~VDVDGG~~~ 733 (1688)
T 2pff_A 715 VELCQKSPVMADLNGGLQF 733 (1688)
T ss_dssp HHHHTTSCCCCCCSCSGGG
T ss_pred cccccCcEEEEEcCCCeee
Confidence 799999999876 99764
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-33 Score=308.58 Aligned_cols=240 Identities=20% Similarity=0.213 Sum_probs=197.2
Q ss_pred CCCcCCCCCEEEEEcCCCh-hHHHHHHHHHHCCCeEEEE-ecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHH
Q 017757 30 PVRIPIKDRHVFITGGSSG-IGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~g-IG~aia~~L~~~G~~V~l~-~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~ 104 (366)
+..++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.... +.++.++.+|++|.+++++
T Consensus 668 ~~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~a 747 (1887)
T 2uv8_A 668 FNGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA 747 (1887)
T ss_dssp HTCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred cccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHH
Confidence 3456789999999999998 9999999999999999998 688888877777774432 5689999999999999999
Q ss_pred HHHh---------cC-CCcEEEEcCCCCCCC-CccCCC--HHHHHHHHHHHHHHHHHHHHHH--HHHHHhccCCCCcEEE
Q 017757 105 ALDE---------AG-PVDVLVVNQGVFVPG-ELEVQS--LDEVRLMIDVNITGSFHMIKAA--LPLIKKRQNGGPASIA 169 (366)
Q Consensus 105 ~~~~---------~~-~id~vi~nAG~~~~~-~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--~~~l~~~~~~~~g~iv 169 (366)
++++ ++ ++|+||||||+.... ++.+.+ .++|++++++|+.+++.+++.+ +|.|++++ .++||
T Consensus 748 lv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~---~G~IV 824 (1887)
T 2uv8_A 748 LIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP---AQVIL 824 (1887)
T ss_dssp HHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC---EEEEE
T ss_pred HHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC---CCEEE
Confidence 8874 44 899999999998777 888888 9999999999999999999988 67776643 58999
Q ss_pred EecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHH-HHHHHhHhccCCc
Q 017757 170 LMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGL-AEALQQEVIADDI 248 (366)
Q Consensus 170 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l-~~~la~e~~~~gI 248 (366)
++||.++.. + +.. .|++||+|+.+| ++.++.+++++ |
T Consensus 825 nISS~ag~~----------------------g--g~~-----------------aYaASKAAL~~Lttr~lA~ela~~-I 862 (1887)
T 2uv8_A 825 PMSPNHGTF----------------------G--GDG-----------------MYSESKLSLETLFNRWHSESWANQ-L 862 (1887)
T ss_dssp EECSCTTCS----------------------S--CBT-----------------THHHHHHHGGGHHHHHHHSSCTTT-E
T ss_pred EEcChHhcc----------------------C--CCc-----------------hHHHHHHHHHHHHHHHHHHHhCCC-e
Confidence 999998865 3 444 899999999999 99999999988 9
Q ss_pred EEEEEcCCCCC-CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCc-hhH
Q 017757 249 HVSLIFPPDTE-TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQ-RSV 326 (366)
Q Consensus 249 ~Vn~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~-~~~ 326 (366)
+||+|+||+|+ |++.... . .. ++ ....++. +.+.|+|++..++||+ ++. +.|
T Consensus 863 rVNaV~PG~V~tT~m~~~~-~---------------~~-~~----~~~~~pl-r~~sPEEVA~avlfLa----Sd~~as~ 916 (1887)
T 2uv8_A 863 TVCGAIIGWTRGTGLMSAN-N---------------II-AE----GIEKMGV-RTFSQKEMAFNLLGLL----TPEVVEL 916 (1887)
T ss_dssp EEEEEEECCEECC-----C-C---------------TT-HH----HHHTTSC-CCEEHHHHHHHHHGGG----SHHHHHH
T ss_pred EEEEEEecccccccccccc-h---------------hH-HH----HHHhcCC-CCCCHHHHHHHHHHHh----CCCcccc
Confidence 99999999999 7875431 0 00 11 1223343 6779999999999999 988 899
Q ss_pred HHHHHHHHH--HHHHH
Q 017757 327 LMAFVEVVA--AGLIR 340 (366)
Q Consensus 327 itG~~i~~d--gG~~~ 340 (366)
+||+.+.+| ||++.
T Consensus 917 iTGq~I~VDVDGG~~~ 932 (1887)
T 2uv8_A 917 CQKSPVMADLNGGLQF 932 (1887)
T ss_dssp HHHSCEEEEESCSTTT
T ss_pred ccCcEEEEECCCCeec
Confidence 999999875 99753
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-32 Score=298.30 Aligned_cols=239 Identities=17% Similarity=0.173 Sum_probs=195.4
Q ss_pred CCcCCCCCEEEEEcCCCh-hHHHHHHHHHHCCCeEEEEe-cCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHH
Q 017757 31 VRIPIKDRHVFITGGSSG-IGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~g-IG~aia~~L~~~G~~V~l~~-r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~ 105 (366)
..++++||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++.... +.++.++.||++|.++++++
T Consensus 646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al 725 (1878)
T 2uv9_A 646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL 725 (1878)
T ss_dssp HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence 346789999999999999 99999999999999999995 66777766666664332 56899999999999999998
Q ss_pred HHh-------cC-CCcEEEEcCCCCCCC-CccCCC--HHHHHHHHHHHHHHHHHHHHH--HHHHHHhccCCCCcEEEEec
Q 017757 106 LDE-------AG-PVDVLVVNQGVFVPG-ELEVQS--LDEVRLMIDVNITGSFHMIKA--ALPLIKKRQNGGPASIALMS 172 (366)
Q Consensus 106 ~~~-------~~-~id~vi~nAG~~~~~-~~~~~~--~~~~~~~~~vN~~~~~~l~~~--~~~~l~~~~~~~~g~iv~vs 172 (366)
+++ ++ ++|+||||||+.... ++.+.+ .++|++++++|+.+++.+++. ++|.|++++ .++||++|
T Consensus 726 v~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~---~G~IVnIS 802 (1878)
T 2uv9_A 726 VNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP---AQVILPLS 802 (1878)
T ss_dssp HHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC---EEECCEEC
T ss_pred HHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC---CCEEEEEc
Confidence 875 56 899999999998776 888888 899999999999999999987 667776543 58999999
Q ss_pred CCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHh-HhccCCcEEE
Q 017757 173 SQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQ-EVIADDIHVS 251 (366)
Q Consensus 173 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~-e~~~~gI~Vn 251 (366)
|.++.. + +.. .|++||+|+.+|++.++. +++++ |+||
T Consensus 803 S~ag~~----------------------g--g~~-----------------aYaASKAAL~aLt~~laAeEla~~-IrVN 840 (1878)
T 2uv9_A 803 PNHGTF----------------------G--NDG-----------------LYSESKLALETLFNRWYSESWGNY-LTIC 840 (1878)
T ss_dssp SCSSSS----------------------S--CCS-----------------SHHHHHHHHTTHHHHHHHSTTTTT-EEEE
T ss_pred chhhcc----------------------C--Cch-----------------HHHHHHHHHHHHHHHHHHHHcCCC-eEEE
Confidence 998865 3 344 899999999999886654 57776 9999
Q ss_pred EEcCCCCC-CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCch-hHHHH
Q 017757 252 LIFPPDTE-TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQR-SVLMA 329 (366)
Q Consensus 252 ~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~-~~itG 329 (366)
+|+||+++ |++.... +. .......++. +.+.|+|++..++||+ ++.+ +++||
T Consensus 841 aVaPG~V~gT~m~~~~--------------------~~-~~~~~~~~pl-r~~sPeEVA~avlfLa----Sd~a~s~iTG 894 (1878)
T 2uv9_A 841 GAVIGWTRGTGLMSAN--------------------NL-VAEGVEKLGV-RTFSQQEMAFNLLGLM----APAIVNLCQS 894 (1878)
T ss_dssp EEEECCBCCTTSCSHH--------------------HH-THHHHHTTTC-CCBCHHHHHHHHHHHH----SHHHHHHHTT
T ss_pred EEEecceecCcccccc--------------------hh-hHHHHHhcCC-CCCCHHHHHHHHHHHh----CCcccccccC
Confidence 99999999 9986531 11 1112233333 5669999999999999 9988 99999
Q ss_pred HHHHH--HHHHHH
Q 017757 330 FVEVV--AAGLIR 340 (366)
Q Consensus 330 ~~i~~--dgG~~~ 340 (366)
+.+.+ |||++.
T Consensus 895 q~I~VDVDGG~~~ 907 (1878)
T 2uv9_A 895 DPVFADLNGGLQF 907 (1878)
T ss_dssp SCEEEEESCSGGG
T ss_pred cEEEEEcCCCccc
Confidence 99987 599764
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-31 Score=233.22 Aligned_cols=200 Identities=24% Similarity=0.334 Sum_probs=164.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
|+++||||+||||++++++|+++ +|++++|+++++++..+++. . .++.+|++|++++++++++++++|++||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----~--~~~~~D~~~~~~~~~~~~~~~~id~vi~ 72 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----A--RALPADLADELEAKALLEEAGPLDLLVH 72 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----C--EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----C--cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence 58999999999999999999999 99999999888777666553 1 7889999999999999988889999999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
|||.....++.+.+.+++++++++|+.+++++++++ ++++ .++||++||..+..
T Consensus 73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~~~iv~~sS~~~~~------------------- 126 (207)
T 2yut_A 73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK---GARAVFFGAYPRYV------------------- 126 (207)
T ss_dssp CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE---EEEEEEECCCHHHH-------------------
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC---CcEEEEEcChhhcc-------------------
Confidence 999887778888899999999999999999999998 2332 57999999998876
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhh
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSII 277 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~ 277 (366)
+.++.. .|++||++++.++++++.|++++||++++|+||++.|++......
T Consensus 127 ---~~~~~~-----------------~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~--------- 177 (207)
T 2yut_A 127 ---QVPGFA-----------------AYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGG--------- 177 (207)
T ss_dssp ---SSTTBH-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTS---------
T ss_pred ---CCCCcc-----------------hHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCC---------
Confidence 556666 999999999999999999999999999999999999997433110
Q ss_pred hccCCCCCHHHHHHHHHhhhhCCC
Q 017757 278 AASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 278 ~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
.....++++++++.++..+..++
T Consensus 178 -~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 178 -PPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp -CCTTCBCHHHHHHHHHHHHC--C
T ss_pred -CCCCCCCHHHHHHHHHHHHhCCC
Confidence 11234567777777766665544
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-32 Score=249.56 Aligned_cols=245 Identities=22% Similarity=0.230 Sum_probs=181.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~vi 116 (366)
|++|||||+||||++++++|+++|++|++++|+.++++. .+.+|++|.++++++++++ +++|+||
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~D~~~~~~~~~~~~~~~~~~d~vi 67 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------DLSTPGGRETAVAAVLDRCGGVLDGLV 67 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------cccCCcccHHHHHHHHHHcCCCccEEE
Confidence 689999999999999999999999999999998764321 1678999999999999887 7899999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
||||.... .+++++++++|+.+++++++++++.|++++ .++||++||..+......... . .+....
T Consensus 68 ~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~---~-~~~~~~ 133 (255)
T 2dkn_A 68 CCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQ---QPAAVIVGSIAATQPGAAELP---M-VEAMLA 133 (255)
T ss_dssp ECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS---SCEEEEECCGGGGSTTGGGCH---H-HHHHHH
T ss_pred ECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcC---CceEEEEeccccccccccccc---h-hhhhcc
Confidence 99997642 123788999999999999999999998764 579999999887651100000 0 000000
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhh
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSI 276 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~ 276 (366)
... .....| .....++...|++||++++.+++.++.+++++||+|++|+||.+.|++........
T Consensus 134 ----~~~-~~~~~~----~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~------ 198 (255)
T 2dkn_A 134 ----GDE-ARAIEL----AEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP------ 198 (255)
T ss_dssp ----TCH-HHHHHH----HHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT------
T ss_pred ----cch-hhhhhh----ccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch------
Confidence 000 000000 00001233489999999999999999999999999999999999999766532110
Q ss_pred hhccCCCCCHHHHHHHHHhhh--hCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 277 IAASSGAMKADEVAKKALDGI--KSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 277 ~~~~~~~~~~~~~a~~~~~~i--~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
. ..+ ..... +.+++..++|++..+++++ ++.+.+++|+.+.+|||....
T Consensus 199 -------~-~~~----~~~~~~~~~~~~~~~~dva~~~~~l~----~~~~~~~~G~~~~v~gg~~~~ 249 (255)
T 2dkn_A 199 -------R-YGE----STRRFVAPLGRGSEPREVAEAIAFLL----GPQASFIHGSVLFVDGGMDAL 249 (255)
T ss_dssp -------T-THH----HHHSCCCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTHHHH
T ss_pred -------h-hHH----HHHHHHHHhcCCCCHHHHHHHHHHHh----CCCcccceeeEEEecCCeEee
Confidence 0 011 11222 6678999999999999999 877788999999999997754
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=229.31 Aligned_cols=188 Identities=15% Similarity=0.182 Sum_probs=161.0
Q ss_pred CC-EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 37 DR-HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 37 gk-~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
|| +++||||+||||++++++|+ +|++|++++|+.+ .+.+|++|++++++++++++++|++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 45 79999999999999999999 9999999999864 3789999999999999998899999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
|||||.....++.+.+.+++++.+++|+.+++++++++.|.|++ .++||++||..+..
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~iv~~sS~~~~~----------------- 120 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-----KGSFTLTTGIMMED----------------- 120 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-----EEEEEEECCGGGTS-----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-----CCEEEEEcchhhcC-----------------
Confidence 99999887778888999999999999999999999999998864 37999999988765
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchh
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~ 275 (366)
+.+... .|++||+++++++++++.|+ ++||+||+|+||++.|++..... ..
T Consensus 121 -----~~~~~~-----------------~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~~-~~----- 171 (202)
T 3d7l_A 121 -----PIVQGA-----------------SAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEP-FF----- 171 (202)
T ss_dssp -----CCTTCH-----------------HHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHGG-GS-----
T ss_pred -----CCCccH-----------------HHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhhh-hc-----
Confidence 556666 99999999999999999999 88999999999999998653211 00
Q ss_pred hhhccCCCCCHHHHHHHHHhhh
Q 017757 276 IIAASSGAMKADEVAKKALDGI 297 (366)
Q Consensus 276 ~~~~~~~~~~~~~~a~~~~~~i 297 (366)
.....++++++++.++..+
T Consensus 172 ---~~~~~~~~~dva~~~~~~~ 190 (202)
T 3d7l_A 172 ---EGFLPVPAAKVARAFEKSV 190 (202)
T ss_dssp ---TTCCCBCHHHHHHHHHHHH
T ss_pred ---cccCCCCHHHHHHHHHHhh
Confidence 1123567777777766554
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=249.97 Aligned_cols=216 Identities=17% Similarity=0.177 Sum_probs=178.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEE-ecCc-------------hhHHHHHHHHHhhcCCeEEEEEecCCCHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSIL-ARSG-------------KKLEEAKQSIQLATGIEVATYSADVRDFD 100 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~-~r~~-------------~~~~~~~~~l~~~~~~~v~~~~~Dls~~~ 100 (366)
+++++|||||++|||+++|++|+++|++ |+++ +|+. +.++++.+++... +.++.++.||++|.+
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-GATATVVTCDLTDAE 328 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-TCEEEEEECCTTSHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-CCEEEEEECCCCCHH
Confidence 6899999999999999999999999998 7777 8983 4556667777654 779999999999999
Q ss_pred HHHHHHHhc---CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc
Q 017757 101 AVKTALDEA---GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (366)
Q Consensus 101 ~v~~~~~~~---~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~ 177 (366)
++++++++. +++|+||||||+.....+.+.+.+++++++++|+.|++++.+.+.+.+++++. .++||++||.++.
T Consensus 329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~--~~~iV~~SS~a~~ 406 (525)
T 3qp9_A 329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGR--PPVLVLFSSVAAI 406 (525)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----C--CCEEEEEEEGGGT
T ss_pred HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCC--CCEEEEECCHHHc
Confidence 999999874 78999999999998889999999999999999999999999999999876531 4799999999998
Q ss_pred cccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 178 CWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
. +.++.. .|+++|+++++| +.++.++||+|++|+||+
T Consensus 407 ~----------------------g~~g~~-----------------~YaaaKa~l~~l----A~~~~~~gi~v~sI~pG~ 443 (525)
T 3qp9_A 407 W----------------------GGAGQG-----------------AYAAGTAFLDAL----AGQHRADGPTVTSVAWSP 443 (525)
T ss_dssp T----------------------CCTTCH-----------------HHHHHHHHHHHH----HTSCCSSCCEEEEEEECC
T ss_pred C----------------------CCCCCH-----------------HHHHHHHHHHHH----HHHHHhCCCCEEEEECCc
Confidence 8 777777 999999988887 567778899999999999
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
++|+|...... ...........++|++.++.+...+..++
T Consensus 444 ~~tgm~~~~~~----~~~~~~~g~~~l~pee~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 444 WEGSRVTEGAT----GERLRRLGLRPLAPATALTALDTALGHGD 483 (525)
T ss_dssp BTTSGGGSSHH----HHHHHHTTBCCBCHHHHHHHHHHHHHHTC
T ss_pred cccccccchhh----HHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 99998742111 11112223356899999999998887664
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-28 Score=278.45 Aligned_cols=237 Identities=16% Similarity=0.167 Sum_probs=175.8
Q ss_pred CCCCCEEEEEcCCCh-hHHHHHHHHHHCCCeEEEEecCchh-----HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 34 PIKDRHVFITGGSSG-IGLALAHQAAKEGARVSILARSGKK-----LEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 34 ~l~gk~vLITGas~g-IG~aia~~L~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
.++||++|||||++| ||+++|++|+++|++|++++|+.+. ++++.+++... +.++..+++|++|+++++++++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~-G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF-DATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT-TCEEEEEECCTTCHHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHH
Confidence 489999999999999 9999999999999999999998776 55555555432 5688999999999999998875
Q ss_pred --------hcCCCcEEEEcCCC----CCC-CCccCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEE-
Q 017757 108 --------EAGPVDVLVVNQGV----FVP-GELEVQSLDEV----RLMIDVNITGSFHMIKAALPLIKKRQNGGPASIA- 169 (366)
Q Consensus 108 --------~~~~id~vi~nAG~----~~~-~~~~~~~~~~~----~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv- 169 (366)
++|++|++|||||+ ... ....+.+.++| +..+++|+.+.+.+++.+.+.|+++..+....++
T Consensus 2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D 2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence 45789999999997 211 22223333334 4559999999999999999999886532222333
Q ss_pred EecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhH--hccCC
Q 017757 170 LMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQE--VIADD 247 (366)
Q Consensus 170 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e--~~~~g 247 (366)
..|+..+ ..++.. .|++||+|+.+|++++|.| +++ +
T Consensus 2292 ~~ss~~g------------------------~~g~~~-----------------aYsASKaAl~~LtrslA~E~~~a~-~ 2329 (3089)
T 3zen_D 2292 PGSPNRG------------------------MFGGDG-----------------AYGEAKSALDALENRWSAEKSWAE-R 2329 (3089)
T ss_dssp EECSSTT------------------------SCSSCS-----------------SHHHHGGGHHHHHHHHHHCSTTTT-T
T ss_pred ECCcccc------------------------cCCCch-----------------HHHHHHHHHHHHHHHHHhccccCC-C
Confidence 3333222 222344 8999999999999999999 665 6
Q ss_pred cEEEEEcCCCCC-CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhH
Q 017757 248 IHVSLIFPPDTE-TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSV 326 (366)
Q Consensus 248 I~Vn~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~ 326 (366)
|+||+|+||+|+ |++.... +.. .......+. |..+|+|++..++||+ |+++++
T Consensus 2330 IrVn~v~PG~v~tT~l~~~~--------------------~~~-~~~~~~~~~-r~~~PeEIA~avlfLa----S~~a~~ 2383 (3089)
T 3zen_D 2330 VSLAHALIGWTKGTGLMGQN--------------------DAI-VSAVEEAGV-TTYTTDEMAAMLLDLC----TVETKV 2383 (3089)
T ss_dssp EEEEEEECCCEECSTTTTTT--------------------TTT-HHHHGGGSC-BCEEHHHHHHHHHHTT----SHHHHH
T ss_pred eEEEEEeecccCCCcccccc--------------------hhH-HHHHHhcCC-CCCCHHHHHHHHHHHh----Chhhhh
Confidence 999999999998 6654321 000 112233333 4559999999999999 999886
Q ss_pred HHH-HHHHHH--HHHH
Q 017757 327 LMA-FVEVVA--AGLI 339 (366)
Q Consensus 327 itG-~~i~~d--gG~~ 339 (366)
+++ +.+.+| ||+.
T Consensus 2384 ~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D 2384 AAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp HHHHSCEEEECSBSCS
T ss_pred HhcCCeEEEEcCCCcC
Confidence 655 545555 9974
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-27 Score=233.68 Aligned_cols=211 Identities=21% Similarity=0.286 Sum_probs=170.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc---hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG---KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--- 109 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--- 109 (366)
++++|||||++|||+++|++|+++|+ +|++++|+. +..++..+++... +.++.++.||++|.+++++++++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL-GVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 59999999999999999999999999 799999974 3456666666654 779999999999999999999875
Q ss_pred CCCcEEEEcCCCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|+||||||+. ....+.+.+.++|++++++|+.|++++.+.+.+. . .++||++||.++..
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~---~~~iV~~SS~a~~~---------- 380 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----D---LDAFVLFSSGAAVW---------- 380 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----C---CSEEEEEEEHHHHT----------
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----C---CCEEEEEeChHhcC----------
Confidence 5899999999998 6778899999999999999999999998877543 2 57999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|+++|+++.+|++.+ ..+||++++|+||++.++.+.....
T Consensus 381 ------------g~~g~~-----------------~YaAaKa~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~~~ 427 (496)
T 3mje_A 381 ------------GSGGQP-----------------GYAAANAYLDALAEHR----RSLGLTASSVAWGTWGEVGMATDPE 427 (496)
T ss_dssp ------------TCTTCH-----------------HHHHHHHHHHHHHHHH----HHTTCCCEEEEECEESSSCC-----
T ss_pred ------------CCCCcH-----------------HHHHHHHHHHHHHHHH----HhcCCeEEEEECCcccCCccccChH
Confidence 777777 9999999998887754 4579999999999987765543211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
............++|++.++.+...+..+.
T Consensus 428 ---~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 428 ---VHDRLVRQGVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp ----CHHHHHTTEEEECHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHhcCCCCCCHHHHHHHHHHHHcCCC
Confidence 111222222335789999988888876654
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=244.29 Aligned_cols=212 Identities=17% Similarity=0.271 Sum_probs=177.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHH-HCCC-eEEEEecC---chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-
Q 017757 36 KDRHVFITGGSSGIGLALAHQAA-KEGA-RVSILARS---GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA- 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~-~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~- 109 (366)
.+|+++||||++|||+++|++|+ ++|+ +|++++|+ .+.+++..++++.. +.++.++.||++|++++++++++.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY-GAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHH
Confidence 68999999999999999999999 7999 59999998 45567777777654 779999999999999999999874
Q ss_pred --CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 110 --GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 110 --~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
.++|+||||||+.....+.+++.++|++++++|+.|++++.+++.|.| +||++||.++..
T Consensus 608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l---------~iV~~SS~ag~~--------- 669 (795)
T 3slk_A 608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV---------ALVLFSSVSGVL--------- 669 (795)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS---------EEEEEEETHHHH---------
T ss_pred HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC---------EEEEEccHHhcC---------
Confidence 379999999999988999999999999999999999999999986544 799999999988
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|+++|+ |+++++.+++++||++|+|+||++.|+++....
T Consensus 670 -------------g~~g~~-----------------~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~ 715 (795)
T 3slk_A 670 -------------GSGGQG-----------------NYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTL 715 (795)
T ss_dssp -------------TCSSCH-----------------HHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHH
T ss_pred -------------CCCCCH-----------------HHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccc
Confidence 888888 9999997 777777888889999999999999998765432
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
... ............+++++..+.+...+..++
T Consensus 716 ~~~-~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 716 REA-EQDRLARSGLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp HHH-HHHHHHHTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred cHH-HHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 110 111222333457788998888888876664
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-25 Score=221.87 Aligned_cols=210 Identities=22% Similarity=0.272 Sum_probs=173.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCch---hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGK---KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~---~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++++|||||+||||++++++|+++|+ +|++++|+.. .+++..+++... +.++.++.||++|.+++++++++ ++
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~-~~ 335 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH-GCEVVHAACDVAERDALAALVTA-YP 335 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT-TCEEEEEECCSSCHHHHHHHHHH-SC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc-CCEEEEEEeCCCCHHHHHHHHhc-CC
Confidence 589999999999999999999999999 5999999874 455666666543 67899999999999999999998 78
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+||||||+.....+.+.+.+++++++++|+.|++++.+.+.+. . + .++||++||.++..
T Consensus 336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~--~---~~~~V~~SS~a~~~------------- 396 (511)
T 2z5l_A 336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K--G---LDAFVLFSSVTGTW------------- 396 (511)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T--T---CCCEEEEEEGGGTT-------------
T ss_pred CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c--C---CCEEEEEeCHHhcC-------------
Confidence 999999999988888889999999999999999999998876432 1 1 57999999998877
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC-CCCChhhhhhcC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT-ETPGLEEENKRR 270 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v-~T~~~~~~~~~~ 270 (366)
+.++.. .|+++|++++.|++.++ ..|+++++|+||++ +|+|......
T Consensus 397 ---------g~~g~~-----------------~YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~~~-- 444 (511)
T 2z5l_A 397 ---------GNAGQG-----------------AYAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGAGE-- 444 (511)
T ss_dssp ---------CCTTBH-----------------HHHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCHHH--
T ss_pred ---------CCCCCH-----------------HHHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCcccccccH--
Confidence 667777 99999999999988654 56999999999999 7877643211
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
..........++++++++.+...+..++
T Consensus 445 ---~~~~~~g~~~l~~e~~a~~l~~al~~~~ 472 (511)
T 2z5l_A 445 ---ESLSRRGLRAMDPDAAVDALLGAMGRND 472 (511)
T ss_dssp ---HHHHHHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred ---HHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 1111223457899999999999987775
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.8e-25 Score=219.39 Aligned_cols=211 Identities=18% Similarity=0.244 Sum_probs=168.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCch---hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGK---KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-- 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~---~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-- 109 (366)
.++++|||||+||||++++++|+++|++ |++++|+.. .+++..+++... +.++.++.||++|.+++++++++.
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dv~d~~~v~~~~~~i~~ 303 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GARTTVAACDVTDRESVRELLGGIGD 303 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc-CCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 5899999999999999999999999995 999999875 455666666543 678999999999999999999874
Q ss_pred -CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 -GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 -~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|+||||||+.....+.+.+.+++++++++|+.|++++.+.+.+ .+ .++||++||.++..
T Consensus 304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~---~~~~V~~SS~a~~~---------- 366 (486)
T 2fr1_A 304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD---LTAFVLFSSFASAF---------- 366 (486)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC---CSEEEEEEEHHHHT----------
T ss_pred cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CC---CCEEEEEcChHhcC----------
Confidence 6899999999998888888999999999999999999999988743 22 57999999998877
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|+++|+++.+|++.+ ...|+++++|+||.+.++.+.....
T Consensus 367 ------------g~~g~~-----------------~Yaaaka~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~~ 413 (486)
T 2fr1_A 367 ------------GAPGLG-----------------GYAPGNAYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGPV 413 (486)
T ss_dssp ------------CCTTCT-----------------TTHHHHHHHHHHHHHH----HHTTCCCEEEEECCBC---------
T ss_pred ------------CCCCCH-----------------HHHHHHHHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchhH
Confidence 666777 9999999998886654 4569999999999998873322111
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
...........+++++.++.+...+..++
T Consensus 414 ----~~~~~~~g~~~i~~e~~a~~l~~~l~~~~ 442 (486)
T 2fr1_A 414 ----ADRFRRHGVIEMPPETACRALQNALDRAE 442 (486)
T ss_dssp -------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred ----HHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 01111122346899999999999887764
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-25 Score=203.93 Aligned_cols=196 Identities=15% Similarity=0.114 Sum_probs=150.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
|++|++|||||+||||++++++|+++|++|++++|+..+.+ +.++.++.+|++|.++++++++ ++|+
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~---~~D~ 67 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVA---GCDG 67 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHT---TCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHc---CCCE
Confidence 45789999999999999999999999999999999876532 4578999999999999999998 7899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
||||||.. +.+++++++++|+.+++++++++.+ ++ .++||++||..++.......
T Consensus 68 vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~----~~---~~~iv~~SS~~~~g~~~~~~---------- 122 (267)
T 3rft_A 68 IVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARA----HG---QPRIVFASSNHTIGYYPQTE---------- 122 (267)
T ss_dssp EEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHH----TT---CCEEEEEEEGGGGTTSBTTS----------
T ss_pred EEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHH----cC---CCEEEEEcchHHhCCCCCCC----------
Confidence 99999984 2334788999999999999999943 22 57999999988764111000
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcch
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~ 274 (366)
.+.+..+..+...|++||++++.+++.++.++ |+++++|.||.+.++.......
T Consensus 123 -----------------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~~------ 176 (267)
T 3rft_A 123 -----------------RLGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRML------ 176 (267)
T ss_dssp -----------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTHH------
T ss_pred -----------------CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCce------
Confidence 01111222333489999999999999999886 7888888888887764332111
Q ss_pred hhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 275 SIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 275 ~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
..++.++++++.+...+...
T Consensus 177 ------~~~~~~~d~a~~~~~~~~~~ 196 (267)
T 3rft_A 177 ------STWFSHDDFVSLIEAVFRAP 196 (267)
T ss_dssp ------HHBCCHHHHHHHHHHHHHCS
T ss_pred ------eeEEcHHHHHHHHHHHHhCC
Confidence 11467899998887776554
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=190.45 Aligned_cols=166 Identities=12% Similarity=0.129 Sum_probs=124.7
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeE-EEEEecCCCHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEV-ATYSADVRDFDAVKTAL 106 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v-~~~~~Dls~~~~v~~~~ 106 (366)
+++...+++||+++||||+|+||++++++|+++|++|++++|+++++++..+ .++ .++.+|++ + .+.
T Consensus 12 ~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~--~---~~~ 79 (236)
T 3e8x_A 12 SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------RGASDIVVANLE--E---DFS 79 (236)
T ss_dssp ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------TTCSEEEECCTT--S---CCG
T ss_pred ccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------CCCceEEEcccH--H---HHH
Confidence 3455677999999999999999999999999999999999999987765432 256 88999999 3 333
Q ss_pred HhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 107 DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 107 ~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
+.++++|+||||||.... +++++.+++|+.++.++++++.+ .+ .++||++||..+...
T Consensus 80 ~~~~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~~~----~~---~~~iv~~SS~~~~~~------- 137 (236)
T 3e8x_A 80 HAFASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEAEK----RG---IKRFIMVSSVGTVDP------- 137 (236)
T ss_dssp GGGTTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHHHH----HT---CCEEEEECCTTCSCG-------
T ss_pred HHHcCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHHHH----cC---CCEEEEEecCCCCCC-------
Confidence 445689999999997542 35788999999999999998843 22 579999999655430
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+ . ..+... .|+.+|++++.+.+ ..|+++++|.||.+.|+..
T Consensus 138 -----~----~---~~~~~~-----------------~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~ 178 (236)
T 3e8x_A 138 -----D----Q---GPMNMR-----------------HYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEES 178 (236)
T ss_dssp -----G----G---SCGGGH-----------------HHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCC
T ss_pred -----C----C---Chhhhh-----------------hHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCC
Confidence 0 0 002233 89999999998876 4699999999999999864
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-24 Score=193.25 Aligned_cols=193 Identities=18% Similarity=0.194 Sum_probs=147.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
++++|+++||||+|+||++++++|+++|+ +|++++|+++++++.. ..++.++.+|++|+++++++++ +
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~---~ 84 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQ---G 84 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGS---S
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhc---C
Confidence 36789999999999999999999999999 9999999876543211 1257789999999998888776 7
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+||||||... ..++++..+++|+.++..+++++. +.+ .++||++||..+..
T Consensus 85 ~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~~----~~~---~~~iv~~SS~~~~~------------- 137 (242)
T 2bka_A 85 HDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAK----AGG---CKHFNLLSSKGADK------------- 137 (242)
T ss_dssp CSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHH----HTT---CCEEEEECCTTCCT-------------
T ss_pred CCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHHH----HCC---CCEEEEEccCcCCC-------------
Confidence 999999999642 224568899999999998888754 333 57999999987643
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCc-EEEEEcCCCCCCCChhhhhhcC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDI-HVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI-~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+... .|+++|++++.+++.+ ++ ++++|+||.+.|+......
T Consensus 138 -----------~~~~-----------------~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~--- 179 (242)
T 2bka_A 138 -----------SSNF-----------------LYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRP--- 179 (242)
T ss_dssp -----------TCSS-----------------HHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSH---
T ss_pred -----------CCcc-----------------hHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcH---
Confidence 1223 7999999999988754 45 8999999999998643210
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhh----CCCeEeeCCchhHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIK----SGSFIVPCNSEGFLLSIA 316 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~----~gr~~~~~~v~~~~~~L~ 316 (366)
.+...+.....++ .++++.++|++..+++++
T Consensus 180 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~ 214 (242)
T 2bka_A 180 ---------------GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNV 214 (242)
T ss_dssp ---------------HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHH
T ss_pred ---------------HHHHHHHhhcccCccccCCcccCHHHHHHHHHHHH
Confidence 1222222222233 568899999999999998
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=193.42 Aligned_cols=211 Identities=17% Similarity=0.173 Sum_probs=158.5
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHC-CC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKE-GA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~-G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+....+++|++|||||+|+||++++++|+++ |+ +|++++|++.+.++..+++. ..++.++.+|++|.++++++++
T Consensus 14 ~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~ 90 (344)
T 2gn4_A 14 NHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYALE 90 (344)
T ss_dssp --CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHTT
T ss_pred cHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHh
Confidence 3445588999999999999999999999999 98 99999999887776665553 3578999999999999998887
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++|+||||||..... ....+..+.+++|+.++.++++++.+. + .++||++||..+..
T Consensus 91 ---~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~---v~~~V~~SS~~~~~--------- 147 (344)
T 2gn4_A 91 ---GVDICIHAAALKHVP----IAEYNPLECIKTNIMGASNVINACLKN----A---ISQVIALSTDKAAN--------- 147 (344)
T ss_dssp ---TCSEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHT----T---CSEEEEECCGGGSS---------
T ss_pred ---cCCEEEECCCCCCCC----chhcCHHHHHHHHHHHHHHHHHHHHhC----C---CCEEEEecCCccCC---------
Confidence 789999999975421 122345689999999999999999764 2 56999999965432
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+ .. .|++||++++.+++.++.++++.|+++++|.||.+.++......
T Consensus 148 -------------p---~~-----------------~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~ 194 (344)
T 2gn4_A 148 -------------P---IN-----------------LYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVP 194 (344)
T ss_dssp -------------C---CS-----------------HHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHH
T ss_pred -------------C---cc-----------------HHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHH
Confidence 1 23 89999999999999999988888999999999999987522110
Q ss_pred -------hcCCcchh-hhhccCCCCCHHHHHHHHHhhhhC
Q 017757 268 -------KRRPRLTS-IIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 268 -------~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
........ .......++.++++++.++..+..
T Consensus 195 ~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~ 234 (344)
T 2gn4_A 195 FFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKR 234 (344)
T ss_dssp HHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhh
Confidence 00000000 000011246778888887777654
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=191.61 Aligned_cols=208 Identities=16% Similarity=0.083 Sum_probs=146.7
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEE-EecCCCHHHHHHHHHhc
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATY-SADVRDFDAVKTALDEA 109 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~-~~Dls~~~~v~~~~~~~ 109 (366)
+...++++++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.+....+.++.++ .+|++|.++++++++
T Consensus 5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 82 (342)
T 1y1p_A 5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-- 82 (342)
T ss_dssp TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--
T ss_pred cccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--
Confidence 34567899999999999999999999999999999999998877666555544334578888 899999998887776
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
++|+||||||..... +++++.+++|+.++.++++++.+. .+ .++||++||...+..+.....
T Consensus 83 -~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~---~~~iv~~SS~~~~~~~~~~~~---- 144 (342)
T 1y1p_A 83 -GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT---PS---VKRFVLTSSTVSALIPKPNVE---- 144 (342)
T ss_dssp -TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC---TT---CCEEEEECCGGGTCCCCTTCC----
T ss_pred -CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhC---CC---CcEEEEeccHHHhcCCCCCCC----
Confidence 799999999975432 235679999999999999998641 11 579999999877531110000
Q ss_pred cccccccccCCCCCCccc-cccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 190 NENKLCESSGKGHGGYHV-TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
.....+. ....... ..+. .....+..+...|+.||++.+.+++.++.++.. +++++++.||.+.++...
T Consensus 145 -~~~~~E~---~~~~~~~~~~~~-~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~ 214 (342)
T 1y1p_A 145 -GIYLDEK---SWNLESIDKAKT-LPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFD 214 (342)
T ss_dssp -CCEECTT---CCCHHHHHHHHH-SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSC
T ss_pred -CcccCcc---ccCchhhhhhcc-ccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCC
Confidence 0000000 0000000 0000 000001122348999999999999999999876 899999999999988653
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=192.06 Aligned_cols=197 Identities=14% Similarity=0.066 Sum_probs=140.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+++|||||+|+||++++++|+++|++|++++|+. ...+...+.+.. ..++.++.+|++|.++++++++.. ++|+||
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~--~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vi 78 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS--LGNFEFVHGDIRNKNDVTRLITKY-MPDSCF 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc--CCceEEEEcCCCCHHHHHHHHhcc-CCCEEE
Confidence 5799999999999999999999999999999854 233333334432 236888999999999999999864 699999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc-ccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN-KLC 195 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~-~~~ 195 (366)
||||.... +.+.++++..+++|+.++.++++++.+.+. .++||++||.+.+...... .+... ...
T Consensus 79 h~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~------~~~iv~~SS~~v~g~~~~~----~~~e~~~~~ 144 (347)
T 1orr_A 79 HLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS------NCNIIYSSTNKVYGDLEQY----KYNETETRY 144 (347)
T ss_dssp ECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT------TCEEEEEEEGGGGTTCTTS----CEEECSSCE
T ss_pred ECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC------CceEEEeccHHHhCCCCcC----Ccccccccc
Confidence 99996432 224567788999999999999999987642 2599999998765411000 00000 000
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.. . ......+..+..+...|+.||++.+.+++.++.++ |+++++|.||.+.++..
T Consensus 145 ~~~--~-------~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~ 200 (347)
T 1orr_A 145 TCV--D-------KPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQ 200 (347)
T ss_dssp EET--T-------CTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTC
T ss_pred ccc--c-------cccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCC
Confidence 000 0 00001111222334489999999999999999886 89999999999999864
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.1e-22 Score=187.05 Aligned_cols=224 Identities=12% Similarity=0.035 Sum_probs=155.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHH-HHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEE-AKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~-~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
|++|++|||||+|+||++++++|+++|++|++++|+.+..+. ..+.+. ...++.++.+|++|.++++++++.. ++|
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 77 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG--IENDVKIIHMDLLEFSNIIRTIEKV-QPD 77 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT--CTTTEEECCCCTTCHHHHHHHHHHH-CCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc--ccCceeEEECCCCCHHHHHHHHHhc-CCC
Confidence 468999999999999999999999999999999998765321 112221 1246888999999999999999876 689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
+||||||.... +.+.++++..+++|+.++.++++++.+. .. .++||++||.+.+....
T Consensus 78 ~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-----~~~iv~~SS~~vyg~~~------------ 135 (345)
T 2z1m_A 78 EVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTV-KP-----DTKFYQASTSEMFGKVQ------------ 135 (345)
T ss_dssp EEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT-----TCEEEEEEEGGGGCSCS------------
T ss_pred EEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-----CceEEEEechhhcCCCC------------
Confidence 99999997531 1234567889999999999999999752 11 26999999987653100
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc---cCCcEEEEEcCCCCCCCChhhhhh--
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI---ADDIHVSLIFPPDTETPGLEEENK-- 268 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~Vn~V~PG~v~T~~~~~~~~-- 268 (366)
.. +..+..+..+...|+.||++.+.+++.++.++. ..++.+|.+.||...|.+......
T Consensus 136 ----------~~------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~ 199 (345)
T 2z1m_A 136 ----------EI------PQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSL 199 (345)
T ss_dssp ----------SS------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHH
T ss_pred ----------CC------CCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHH
Confidence 00 001111222233899999999999999999875 345677889999988876432110
Q ss_pred -----cCC-c-chhhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 269 -----RRP-R-LTSIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 269 -----~~~-~-~~~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
... . ...........+.++++++.++..+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~ 237 (345)
T 2z1m_A 200 ARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQ 237 (345)
T ss_dssp HHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTS
T ss_pred HHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence 000 0 000001112366899999988887754
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=186.01 Aligned_cols=185 Identities=18% Similarity=0.151 Sum_probs=143.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+++++|||||+|+||++++++|+++|++|++++|+.+..++..+.+....+.++.++.+|++|++++++++++. ++|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~v 82 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAH-PITAA 82 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHS-CCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhcc-CCcEE
Confidence 56899999999999999999999999999999998877776666666555678899999999999999999874 79999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
|||||...... ..+..++.+++|+.++.++++++ ++.+ .++||++||...+..+
T Consensus 83 ih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~~~iv~~SS~~~~g~~--------------- 136 (341)
T 3enk_A 83 IHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVM----RERA---VKRIVFSSSATVYGVP--------------- 136 (341)
T ss_dssp EECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTT---CCEEEEEEEGGGBCSC---------------
T ss_pred EECccccccCc----cccChHHHHHHHHHHHHHHHHHH----HhCC---CCEEEEEecceEecCC---------------
Confidence 99999754321 33445678899999999887765 3433 5799999997765310
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
... ...+..+..+...|+.||++.+.+++.++.++. +++++++.|+.+.++.
T Consensus 137 -------~~~------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~ 188 (341)
T 3enk_A 137 -------ERS------PIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAH 188 (341)
T ss_dssp -------SSS------SBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCC
T ss_pred -------CCC------CCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCc
Confidence 000 011112222334899999999999999998863 5999999998887763
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=183.29 Aligned_cols=180 Identities=17% Similarity=0.113 Sum_probs=135.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+..+.+++|||||+|+||++++++|+++|++|++++|+... +. + ++.++.+|++|.++++++++. +++
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l------~~~~~~~Dl~d~~~~~~~~~~-~~~ 75 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P------NVEMISLDIMDSQRVKKVISD-IKP 75 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T------TEEEEECCTTCHHHHHHHHHH-HCC
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c------eeeEEECCCCCHHHHHHHHHh-cCC
Confidence 34567899999999999999999999999999999998764 21 1 578899999999999999986 369
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+||||||..... .+.++++..+++|+.++.++++++ +.+. + .++||++||.+.+...... ..
T Consensus 76 d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~---~~~iv~~SS~~v~g~~~~~-------~~ 138 (321)
T 2pk3_A 76 DYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L---DCRILTIGSSEEYGMILPE-------ES 138 (321)
T ss_dssp SEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C---CCEEEEEEEGGGTBSCCGG-------GC
T ss_pred CEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C---CCeEEEEccHHhcCCCCCC-------CC
Confidence 9999999975321 123457889999999999999999 5442 1 5799999998765411000 00
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
.+.+..+..+...|+.||++.+.+++.++.++ |++++++.||.+.++..
T Consensus 139 -------------------~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~ 187 (321)
T 2pk3_A 139 -------------------PVSEENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQ 187 (321)
T ss_dssp -------------------SBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred -------------------CCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCC
Confidence 01111122233389999999999999999874 89999999999988864
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=184.30 Aligned_cols=190 Identities=13% Similarity=0.054 Sum_probs=145.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.++++++|||||+|+||++++++|+++|++|++++|+.++.+...+.+. .+.++.++.+|++|.+++.++++.. ++|
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 82 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF-QPE 82 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH-CCS
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--cCCceEEEEccccCHHHHHHHHHhc-CCC
Confidence 3678999999999999999999999999999999998766544444332 1346788999999999999999866 699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
+||||||... .+.+.++++..+++|+.++.++++++.+. .. .++||++||...+...... ..
T Consensus 83 ~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~---~~~~v~~SS~~vyg~~~~~---~~----- 144 (357)
T 1rkx_A 83 IVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG---VKAVVNITSDKCYDNKEWI---WG----- 144 (357)
T ss_dssp EEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC---CCEEEEECCGGGBCCCCSS---SC-----
T ss_pred EEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC---CCeEEEecCHHHhCCCCcC---CC-----
Confidence 9999999632 12345678899999999999999999753 11 4699999998765410000 00
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc------cCCcEEEEEcCCCCCCCCh
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI------ADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~------~~gI~Vn~V~PG~v~T~~~ 263 (366)
..+..+..+...|+.||++.+.+++.++.++. +.|+++++|.||.+.++..
T Consensus 145 -------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~ 201 (357)
T 1rkx_A 145 -------------------YRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD 201 (357)
T ss_dssp -------------------BCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred -------------------CCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence 00011112233899999999999999999885 4589999999999998753
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-21 Score=183.89 Aligned_cols=186 Identities=16% Similarity=0.088 Sum_probs=141.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch----hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK----KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~----~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
++++++++|||||+|+||++++++|+++|++|++++|+.. .+++..+++....+.++.++.+|++|.++++++++
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 101 (352)
T 1sb8_A 23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA- 101 (352)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-
Confidence 4567899999999999999999999999999999999764 23333333222112478899999999999999988
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++|+||||||..... .+.++++..+++|+.++.++++++.+. + .++||++||...+...
T Consensus 102 --~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~---~~~~v~~SS~~~~~~~-------- 160 (352)
T 1sb8_A 102 --GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----K---VQSFTYAASSSTYGDH-------- 160 (352)
T ss_dssp --TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T---CSEEEEEEEGGGGTTC--------
T ss_pred --CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----C---CCEEEEeccHHhcCCC--------
Confidence 799999999964321 144667889999999999999998642 2 5799999998776411
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+... ..+..+..+...|+.+|++.+.+++.++.++ |+++++|.||.+.++..
T Consensus 161 --------------~~~~------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 212 (352)
T 1sb8_A 161 --------------PGLP------KVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQ 212 (352)
T ss_dssp --------------CCSS------BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTC
T ss_pred --------------CCCC------CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCC
Confidence 0000 0011111223389999999999999999876 79999999999988764
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=177.73 Aligned_cols=170 Identities=18% Similarity=0.130 Sum_probs=128.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKE--GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+++|+++||||+|+||++++++|+++ |++|++++|++++.++. +.++.++.+|++|.++++++++ .+
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~---~~ 70 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------GGEADVFIGDITDADSINPAFQ---GI 70 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------TCCTTEEECCTTSHHHHHHHHT---TC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------CCCeeEEEecCCCHHHHHHHHc---CC
Confidence 56899999999999999999999999 89999999987654432 3456788999999999999987 68
Q ss_pred cEEEEcCCCCCCCCc---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 113 DVLVVNQGVFVPGEL---------EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 113 d~vi~nAG~~~~~~~---------~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
|+||||||....... .+...+++++.+++|+.++.++++++.+. + .++||++||..+..
T Consensus 71 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~iv~~SS~~~~~----- 138 (253)
T 1xq6_A 71 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G---VKHIVVVGSMGGTN----- 138 (253)
T ss_dssp SEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T---CSEEEEEEETTTTC-----
T ss_pred CEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C---CCEEEEEcCccCCC-----
Confidence 999999997542110 12233445567899999999988887542 2 46999999987642
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.+... ..+...|+.+|++++.+++. .|+++++|.||.+.++..
T Consensus 139 -----------------~~~~~~------------~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~ 182 (253)
T 1xq6_A 139 -----------------PDHPLN------------KLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEG 182 (253)
T ss_dssp -----------------TTCGGG------------GGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCS
T ss_pred -----------------CCCccc------------cccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCc
Confidence 111111 00112578899999887753 689999999999988853
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=185.09 Aligned_cols=220 Identities=12% Similarity=0.084 Sum_probs=148.8
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
.+..+.+++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+ .++.++.+|++|.++++++++
T Consensus 11 ~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-----~~v~~~~~Dl~d~~~~~~~~~ 85 (330)
T 2pzm_A 11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-----AGLSVIEGSVTDAGLLERAFD 85 (330)
T ss_dssp ---CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-----TTEEEEECCTTCHHHHHHHHH
T ss_pred ccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-----CCceEEEeeCCCHHHHHHHHh
Confidence 345567789999999999999999999999999999999999754322111111 368889999999999999998
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
+. ++|+||||||..... +.++++ +++|+.++.++++++.. .+ .++||++||.+.+.... ..
T Consensus 86 ~~-~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~---~~~iV~~SS~~~~~~~~-~~--- 146 (330)
T 2pzm_A 86 SF-KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASK----AG---VKRLLNFQTALCYGRPA-TV--- 146 (330)
T ss_dssp HH-CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----HT---CSEEEEEEEGGGGCSCS-SS---
T ss_pred hc-CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHH----cC---CCEEEEecCHHHhCCCc-cC---
Confidence 76 699999999976432 345555 99999999999999873 22 57999999987653100 00
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcE-EEEEcCCCCCCCChhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIH-VSLIFPPDTETPGLEEE 266 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~-Vn~V~PG~v~T~~~~~~ 266 (366)
+....+.. .... .|+.||++++.+++.+ ++....|| ++.+.||. .+++....
T Consensus 147 ---~~~~~E~~----~~~~-----------------~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~ 199 (330)
T 2pzm_A 147 ---PIPIDSPT----APFT-----------------SYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTF 199 (330)
T ss_dssp ---SBCTTCCC----CCCS-----------------HHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHH
T ss_pred ---CCCcCCCC----CCCC-----------------hHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHH
Confidence 00000000 1223 8999999999999887 55455677 68888886 55544322
Q ss_pred hhc--CCcchhhhhc-cCCCCCHHHHHH-HHHhhhhC
Q 017757 267 NKR--RPRLTSIIAA-SSGAMKADEVAK-KALDGIKS 299 (366)
Q Consensus 267 ~~~--~~~~~~~~~~-~~~~~~~~~~a~-~~~~~i~~ 299 (366)
... ... ...... ....+.++++++ .++..+..
T Consensus 200 ~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~~~~~ 235 (330)
T 2pzm_A 200 YKRLKAGQ-KCFCSDTVRDFLDMSDFLAIADLSLQEG 235 (330)
T ss_dssp HHHHHTTC-CCCEESCEECEEEHHHHHHHHHHHTSTT
T ss_pred HHHHHcCC-EEeCCCCEecceeHHHHHHHHHHHHhhc
Confidence 110 000 000000 123467888888 77766644
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-21 Score=181.73 Aligned_cols=181 Identities=14% Similarity=0.147 Sum_probs=135.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCch--hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGK--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+++++|||||+|+||++++++|+++| ++|++++|+.. ..+.+ +++. .+.++.++.+|++|.+++++++. +
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~---~ 75 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE--DDPRYTFVKGDVADYELVKELVR---K 75 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHH---T
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc--cCCceEEEEcCCCCHHHHHHHhh---C
Confidence 45689999999999999999999997 89999998642 21211 1111 13478899999999999999885 7
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+||||||.... +.+.++++..+++|+.++.++++++.+. . . .++||++||...+.... ...
T Consensus 76 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~-~---~~~iv~~SS~~vyg~~~----~~~--- 138 (336)
T 2hun_A 76 VDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE--N-P---EVRFVHVSTDEVYGDIL----KGS--- 138 (336)
T ss_dssp CSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH--C-T---TSEEEEEEEGGGGCCCS----SSC---
T ss_pred CCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--C-C---CcEEEEeccHHHHCCCC----CCC---
Confidence 9999999997531 2245567889999999999999999876 1 1 36999999976543100 000
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
..+..+..+...|+.||++.+.+++.++.++ |++++++.||.+.++..
T Consensus 139 ---------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~ 186 (336)
T 2hun_A 139 ---------------------FTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQ 186 (336)
T ss_dssp ---------------------BCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTC
T ss_pred ---------------------cCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCC
Confidence 0111112223389999999999999999875 89999999999988864
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-20 Score=180.38 Aligned_cols=191 Identities=17% Similarity=0.142 Sum_probs=138.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHH-HCCCeEEEEecCchh---------HHHHHHHHHhhcC----Ce---EEEEEecCCCH
Q 017757 37 DRHVFITGGSSGIGLALAHQAA-KEGARVSILARSGKK---------LEEAKQSIQLATG----IE---VATYSADVRDF 99 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~-~~G~~V~l~~r~~~~---------~~~~~~~l~~~~~----~~---v~~~~~Dls~~ 99 (366)
++++|||||+|+||++++++|+ ++|++|++++|+... .+.+.+.+....+ .+ +.++.+|++|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4589999999999999999999 999999999997654 3333332332212 14 88999999999
Q ss_pred HHHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccc
Q 017757 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179 (366)
Q Consensus 100 ~~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~ 179 (366)
+++++++++++++|+||||||..... .+.++++.++++|+.++.++++++.. .+ .++||++||...+..
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~---~~~iv~~SS~~v~g~ 150 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HK---CDKIIFSSSAAIFGN 150 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT---CCEEEEEEEGGGTBS
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHHH----hC---CCEEEEECCHHHhCC
Confidence 99999999877799999999975322 14466788999999999999998643 22 569999999765431
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+. .. .... +...+.+..+..+...|+.||++.+.+++.++.++ |++++++.|+.+.
T Consensus 151 ~~-~~---~~~~-----------------~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~ 206 (397)
T 1gy8_A 151 PT-MG---SVST-----------------NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNAC 206 (397)
T ss_dssp CC-C-------------------------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEE
T ss_pred CC-cc---cccc-----------------cccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEecccee
Confidence 10 00 0000 00001111122223489999999999999999987 8999999999887
Q ss_pred CCC
Q 017757 260 TPG 262 (366)
Q Consensus 260 T~~ 262 (366)
++.
T Consensus 207 G~~ 209 (397)
T 1gy8_A 207 GAH 209 (397)
T ss_dssp CCC
T ss_pred CCC
Confidence 663
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=179.54 Aligned_cols=194 Identities=16% Similarity=0.128 Sum_probs=131.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.+++|++|||||+|+||++++++|+++|++|+++.|+.+..++... +.... ..++.++.+|++|.++++++++ .
T Consensus 2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~ 77 (337)
T 2c29_D 2 GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK---G 77 (337)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT---T
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc---C
Confidence 4578999999999999999999999999999999998765443322 11110 1257889999999999998887 6
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+|||+|+... ....++ .+..+++|+.++.++++++.+.. . .++||++||..+........ .
T Consensus 78 ~d~Vih~A~~~~---~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~---~---~~riV~~SS~~~~~~~~~~~---~--- 140 (337)
T 2c29_D 78 CTGVFHVATPMD---FESKDP--ENEVIKPTIEGMLGIMKSCAAAK---T---VRRLVFTSSAGTVNIQEHQL---P--- 140 (337)
T ss_dssp CSEEEECCCCCC---SSCSSH--HHHTHHHHHHHHHHHHHHHHHHS---C---CCEEEEECCGGGTSCSSSCC---S---
T ss_pred CCEEEEeccccC---CCCCCh--HHHHHHHHHHHHHHHHHHHHhCC---C---ccEEEEeeeHhhcccCCCCC---c---
Confidence 899999998542 122222 35689999999999999987642 1 46999999987654110000 0
Q ss_pred cccccccCCCCCCcccccccccccccc-ccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFC-LLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
...+. .... .....+ .++...|+.||++.+.+++.++.+ +|+++++|.|+.+.+|..
T Consensus 141 -~~~E~---~~~~--------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~ 198 (337)
T 2c29_D 141 -VYDES---CWSD--------MEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFI 198 (337)
T ss_dssp -EECTT---CCCC--------HHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCS
T ss_pred -ccCcc---cCCc--------hhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCC
Confidence 00000 0000 000000 012237999999998888777654 389999999999988864
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=166.11 Aligned_cols=153 Identities=8% Similarity=0.024 Sum_probs=118.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHH-HCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 37 DRHVFITGGSSGIGLALAHQAA-KEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~-~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.|+++||||+|+||++++++|+ ++|++|++++|+++ +++++. ..+.++.++++|++|+++++++++ ++|+
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~---~~d~ 76 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-----IDHERVTVIEGSFQNPGXLEQAVT---NAEV 76 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-----HTSTTEEEEECCTTCHHHHHHHHT---TCSE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-----cCCCceEEEECCCCCHHHHHHHHc---CCCE
Confidence 4789999999999999999999 89999999999977 554432 124578999999999999999997 7899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
||||||.. |+. ++.+++.|++.+ .++||++||..+..
T Consensus 77 vv~~ag~~-------------------n~~-----~~~~~~~~~~~~---~~~iv~iSs~~~~~---------------- 113 (221)
T 3r6d_A 77 VFVGAMES-------------------GSD-----MASIVKALSRXN---IRRVIGVSMAGLSG---------------- 113 (221)
T ss_dssp EEESCCCC-------------------HHH-----HHHHHHHHHHTT---CCEEEEEEETTTTS----------------
T ss_pred EEEcCCCC-------------------Chh-----HHHHHHHHHhcC---CCeEEEEeeceecC----------------
Confidence 99999953 222 788888888765 57999999988764
Q ss_pred ccccCCCCCCccccccccccccccccccc-hhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTL-LWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.+... ..+.. +... .|+.+|.+++.+.+. .|+++++|+||++.++
T Consensus 114 ------~~~~~~-------~~~~~-~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 114 ------EFPVAL-------EKWTF-DNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYND 160 (221)
T ss_dssp ------CSCHHH-------HHHHH-HTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECC
T ss_pred ------CCCccc-------ccccc-cccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCC
Confidence 222110 00000 1112 699999999887753 5899999999999887
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=180.48 Aligned_cols=196 Identities=15% Similarity=0.118 Sum_probs=139.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKE-GARVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++|||||+|+||++++++|+++ |++|++++|+. ...+.+ +++. .+.++.++.+|++|.+++++++++. ++|+|
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~v 77 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS--ESNRYNFEHADICDSAEITRIFEQY-QPDAV 77 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHHHH-CCSEE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh--cCCCeEEEECCCCCHHHHHHHHhhc-CCCEE
Confidence 5999999999999999999998 79999999865 222221 1111 1347889999999999999999864 69999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCcEEEEecCCccccccccccCccCccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQ--NGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~--~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
|||||.... +.+.++++.++++|+.++.++++++.+.|..-+ .+..++||++||...+............
T Consensus 78 ih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~---- 149 (361)
T 1kew_A 78 MHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS---- 149 (361)
T ss_dssp EECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT----
T ss_pred EECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc----
Confidence 999997531 234566788999999999999999999875410 0002499999997654311000000000
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
..+....+..+..+...|+.||++++.+++.++.++ |+++++|.||.+.++..
T Consensus 150 --------------~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~ 202 (361)
T 1kew_A 150 --------------VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH 202 (361)
T ss_dssp --------------SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred --------------ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCC
Confidence 000011111122333489999999999999999886 79999999999998864
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-21 Score=182.62 Aligned_cols=182 Identities=15% Similarity=0.092 Sum_probs=130.4
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHH--CCCeEEEEecCchhHHHHH------HHHHhhcCCeEEEEEecCCCHHHH
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAK--EGARVSILARSGKKLEEAK------QSIQLATGIEVATYSADVRDFDAV 102 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~--~G~~V~l~~r~~~~~~~~~------~~l~~~~~~~v~~~~~Dls~~~~v 102 (366)
+.++++++++|||||+|+||++++++|++ +|++|++++|+........ .......+.++.++.+|++|++++
T Consensus 4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 83 (362)
T 3sxp_A 4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL 83 (362)
T ss_dssp SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence 45788999999999999999999999999 9999999999765211100 011112245678999999999999
Q ss_pred HHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 103 KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 103 ~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
+++ ...++|+||||||.... +.++++..+++|+.++.++++++. +. .++||++||...+.....
T Consensus 84 ~~~--~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~----~~----~~~~V~~SS~~vyg~~~~ 147 (362)
T 3sxp_A 84 RRL--EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIAR----SK----KAKVIYASSAGVYGNTKA 147 (362)
T ss_dssp HHH--TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHH----HT----TCEEEEEEEGGGGCSCCS
T ss_pred HHh--hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHH----Hc----CCcEEEeCcHHHhCCCCC
Confidence 998 34589999999995422 345677899999999999999983 22 246999999655431000
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
. ..+..+..+...|+.||++.+.+++.++.+ +++..|.|+.+..|.
T Consensus 148 -----------------------~------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~ 193 (362)
T 3sxp_A 148 -----------------------P------NVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPR 193 (362)
T ss_dssp -----------------------S------BCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTT
T ss_pred -----------------------C------CCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcC
Confidence 0 111112223338999999999999988776 566666776666554
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.5e-21 Score=219.81 Aligned_cols=174 Identities=18% Similarity=0.228 Sum_probs=135.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHH---HHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLE---EAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~---~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+|++|||||++|||+++|++|+++|++ |++++|+..+.+ +..+++... +.++.++.||++|.+++++++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ-GVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT-TCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC-CCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 6899999999999999999999999997 888999875543 334444433 67899999999999999998875
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|+||||||+.....+.+++.++|++++++|+.|++++.+.+.+.|.+ .++||++||.++..
T Consensus 1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-----~g~iV~iSS~ag~~---------- 2026 (2512)
T 2vz8_A 1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE-----LDYFVIFSSVSCGR---------- 2026 (2512)
T ss_dssp HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT-----CCEEEEECCHHHHT----------
T ss_pred cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-----CCEEEEecchhhcC----------
Confidence 589999999999988888899999999999999999999999999998866 37999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
+.++.. .|++||+|+.+|++.++.+ |++..++..|.+
T Consensus 2027 ------------g~~g~~-----------------~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2027 ------------GNAGQA-----------------NYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp ------------TCTTCH-----------------HHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred ------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence 777777 9999999999999988775 666666666654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=173.36 Aligned_cols=194 Identities=16% Similarity=0.128 Sum_probs=144.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
.|++|||||+|+||++++++|+++|++|++++|+..+.. ...+.++.+|++|+++++++++ .+|+||
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi 68 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------EAHEEIVACDLADAQAVHDLVK---DCDGII 68 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------CTTEEECCCCTTCHHHHHHHHT---TCSEEE
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------CCCccEEEccCCCHHHHHHHHc---CCCEEE
Confidence 368999999999999999999999999999999875311 1256889999999999999987 689999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
||||... .+++++.+++|+.++.++++++.+ .+ .++||++||...+...... .
T Consensus 69 ~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~---~~~iv~~SS~~~~~~~~~~--------~---- 121 (267)
T 3ay3_A 69 HLGGVSV--------ERPWNDILQANIIGAYNLYEAARN----LG---KPRIVFASSNHTIGYYPRT--------T---- 121 (267)
T ss_dssp ECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHHH----TT---CCEEEEEEEGGGSTTSBTT--------S----
T ss_pred ECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHHH----hC---CCEEEEeCCHHHhCCCCCC--------C----
Confidence 9999752 233578899999999999998864 22 5799999998765411000 0
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC-CCCChhhhhhcCCcchh
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT-ETPGLEEENKRRPRLTS 275 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v-~T~~~~~~~~~~~~~~~ 275 (366)
++.+..+..+...|+.||++++.+++.++.+ .|+++++|.||.+ .++.....
T Consensus 122 ---------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~~~~--------- 174 (267)
T 3ay3_A 122 ---------------RIDTEVPRRPDSLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKDARM--------- 174 (267)
T ss_dssp ---------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCSHHH---------
T ss_pred ---------------CCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCCCCe---------
Confidence 0111112222338999999999999988653 5899999999998 55432111
Q ss_pred hhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 276 IIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 276 ~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
...++.++++++.+...+..++
T Consensus 175 ----~~~~~~~~dva~~~~~~~~~~~ 196 (267)
T 3ay3_A 175 ----MATWLSVDDFMRLMKRAFVAPK 196 (267)
T ss_dssp ----HHHBCCHHHHHHHHHHHHHSSC
T ss_pred ----eeccccHHHHHHHHHHHHhCCC
Confidence 1124689999999988887654
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=8e-21 Score=169.46 Aligned_cols=185 Identities=15% Similarity=0.119 Sum_probs=136.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhcCCCcEEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~id~vi~ 117 (366)
+++||||+|+||++++++|+++|++|++++|+.++.++. .++.++.+|++| +++++++++ ++|+|||
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~~---~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQLH---GMDAIIN 69 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTTT---TCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHHc---CCCEEEE
Confidence 699999999999999999999999999999998754321 478899999999 999888877 6999999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
|||..... .+++|+.++.++++++. +.+ .++||++||..+..
T Consensus 70 ~ag~~~~~------------~~~~n~~~~~~l~~a~~----~~~---~~~iv~~SS~~~~~------------------- 111 (219)
T 3dqp_A 70 VSGSGGKS------------LLKVDLYGAVKLMQAAE----KAE---VKRFILLSTIFSLQ------------------- 111 (219)
T ss_dssp CCCCTTSS------------CCCCCCHHHHHHHHHHH----HTT---CCEEEEECCTTTTC-------------------
T ss_pred CCcCCCCC------------cEeEeHHHHHHHHHHHH----HhC---CCEEEEECcccccC-------------------
Confidence 99976521 67899999999888873 332 56999999987654
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhh
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSII 277 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~ 277 (366)
+.+. .+ .+..+...|+.+|++++.+.+ ...|+++++|.||.+.++....... .-
T Consensus 112 ---~~~~------~e----~~~~~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~-------~~ 165 (219)
T 3dqp_A 112 ---PEKW------IG----AGFDALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLID-------IN 165 (219)
T ss_dssp ---GGGC------CS----HHHHHTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEE-------ES
T ss_pred ---CCcc------cc----cccccccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCccc-------cC
Confidence 1111 00 111223389999999988876 3579999999999998874332111 00
Q ss_pred hccCCCCCHHHHHHHHHhhhhC
Q 017757 278 AASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 278 ~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
......+.++++++.+...+..
T Consensus 166 ~~~~~~i~~~Dva~~i~~~l~~ 187 (219)
T 3dqp_A 166 DEVSASNTIGDVADTIKELVMT 187 (219)
T ss_dssp SSCCCCEEHHHHHHHHHHHHTC
T ss_pred CCcCCcccHHHHHHHHHHHHhC
Confidence 1222345667777666666543
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=175.46 Aligned_cols=224 Identities=12% Similarity=0.057 Sum_probs=153.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCC-------CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEG-------ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G-------~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~ 104 (366)
+..++++++|||||+|+||++++++|+++| ++|++++|+.+.... ..+.++.++.+|++|.+++++
T Consensus 9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~ 81 (342)
T 2hrz_A 9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFSGAVDARAADLSAPGEAEK 81 (342)
T ss_dssp CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCCSEEEEEECCTTSTTHHHH
T ss_pred CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccCCceeEEEcCCCCHHHHHH
Confidence 456789999999999999999999999999 899999998653221 124578899999999999999
Q ss_pred HHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 105 ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 105 ~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
+++ +++|+||||||.... .+.++++..+++|+.++.++++++.+...+++ ..++||++||.+.+.... .
T Consensus 82 ~~~--~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~--~~~~iv~~SS~~~~~~~~-~- 150 (342)
T 2hrz_A 82 LVE--ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDG--YKPRVVFTSSIAVFGAPL-P- 150 (342)
T ss_dssp HHH--TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHC--CCCEEEEEEEGGGCCSSC-C-
T ss_pred HHh--cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccC--CCcEEEEeCchHhhCCCC-C-
Confidence 886 479999999996531 24567889999999999999999987643321 146999999987654110 0
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHh--ccCCcEEEEEc--CCCCCC
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIF--PPDTET 260 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~--~~~gI~Vn~V~--PG~v~T 260 (366)
.. ..+..+..+...|+.||++.+.+++.++.+. ....+|++.|. ||.+.+
T Consensus 151 --~~------------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~ 204 (342)
T 2hrz_A 151 --YP------------------------IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNA 204 (342)
T ss_dssp --SS------------------------BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCC
T ss_pred --CC------------------------cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcc
Confidence 00 0111111223389999999999999988764 22347777777 888766
Q ss_pred CChhh---hh----hcCCcchhhh-hccCCCCCHHHHHHHHHhhhhC
Q 017757 261 PGLEE---EN----KRRPRLTSII-AASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 261 ~~~~~---~~----~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
+...- .. ...+...... ........++++++.++..+..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~ 251 (342)
T 2hrz_A 205 AASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMI 251 (342)
T ss_dssp SGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhc
Confidence 53211 10 0000000000 0001135789999988877743
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.8e-20 Score=177.48 Aligned_cols=205 Identities=13% Similarity=0.070 Sum_probs=139.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH----------------HHHHHHHhhcCCeEEEEEecC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE----------------EAKQSIQLATGIEVATYSADV 96 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~----------------~~~~~l~~~~~~~v~~~~~Dl 96 (366)
+..++.++|||||+|.||++++++|+++|++|++++|+..... +....+....+.++.++.+|+
T Consensus 7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl 86 (404)
T 1i24_A 7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI 86 (404)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence 3457889999999999999999999999999999998754321 111222222245788999999
Q ss_pred CCHHHHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 97 RDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 97 s~~~~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
+|.++++++++.. ++|+||||||....... ..++++++.++++|+.++.++++++.+. + ...+||++||.+.
T Consensus 87 ~d~~~~~~~~~~~-~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~--~~~~~V~~SS~~v 158 (404)
T 1i24_A 87 CDFEFLAESFKSF-EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF----G--EECHLVKLGTMGE 158 (404)
T ss_dssp TSHHHHHHHHHHH-CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH----C--TTCEEEEECCGGG
T ss_pred CCHHHHHHHHhcc-CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh----C--CCcEEEEeCcHHH
Confidence 9999999999865 59999999997543211 2367778889999999999999998653 1 0149999999765
Q ss_pred ccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC
Q 017757 177 QCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP 256 (366)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG 256 (366)
+..... ..++....+.. .+ . ......+..+...|+.||++.+.+++.++.++ |+++++|.||
T Consensus 159 yg~~~~-----~~~E~~~~~~~-~~---~------~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~ 220 (404)
T 1i24_A 159 YGTPNI-----DIEEGYITITH-NG---R------TDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG 220 (404)
T ss_dssp GCCCSS-----CBCSSEEEEEE-TT---E------EEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred hCCCCC-----CCCcccccccc-cc---c------cccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecc
Confidence 531100 00000000000 00 0 00000122233489999999999999998876 8999999999
Q ss_pred CCCCCCh
Q 017757 257 DTETPGL 263 (366)
Q Consensus 257 ~v~T~~~ 263 (366)
.|.+|..
T Consensus 221 ~v~Gp~~ 227 (404)
T 1i24_A 221 VVYGVKT 227 (404)
T ss_dssp EEECSCC
T ss_pred eeeCCCC
Confidence 9988854
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-21 Score=177.11 Aligned_cols=205 Identities=12% Similarity=0.072 Sum_probs=135.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.+..|++|||||+|+||++++++|+++| ++|++++|+++++++. ...++.++++|++|+++++++++ .+
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~---~~ 89 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------YPTNSQIIMGDVLNHAALKQAMQ---GQ 89 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------CCTTEEEEECCTTCHHHHHHHHT---TC
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------ccCCcEEEEecCCCHHHHHHHhc---CC
Confidence 3556899999999999999999999999 8999999998764321 13478899999999999999998 68
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+||||||.. +. ...++.+++.+++.+ .++||++||...+.
T Consensus 90 D~vv~~a~~~--------~~--------------~~~~~~~~~~~~~~~---~~~iV~iSS~~~~~-------------- 130 (236)
T 3qvo_A 90 DIVYANLTGE--------DL--------------DIQANSVIAAMKACD---VKRLIFVLSLGIYD-------------- 130 (236)
T ss_dssp SEEEEECCST--------TH--------------HHHHHHHHHHHHHTT---CCEEEEECCCCC----------------
T ss_pred CEEEEcCCCC--------ch--------------hHHHHHHHHHHHHcC---CCEEEEEecceecC--------------
Confidence 9999999851 11 133567888888765 67999999988764
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.+... ..............|..+|.+ +.+.||++++|+||++.++.........
T Consensus 131 --------~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----------l~~~gi~~~~vrPg~i~~~~~~~~~~~~-- 185 (236)
T 3qvo_A 131 --------EVPGKF----VEWNNAVIGEPLKPFRRAADA-----------IEASGLEYTILRPAWLTDEDIIDYELTS-- 185 (236)
T ss_dssp --------------------------CGGGHHHHHHHHH-----------HHTSCSEEEEEEECEEECCSCCCCEEEC--
T ss_pred --------CCCccc----ccchhhcccchHHHHHHHHHH-----------HHHCCCCEEEEeCCcccCCCCcceEEec--
Confidence 111100 000000000111145444332 2367999999999999887432210000
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
. .....++++.++|++..+++++ ++...++ |+.+.++++.
T Consensus 186 ------------~---------~~~~~~~~i~~~DvA~~i~~ll----~~~~~~~-g~~~~i~~~~ 225 (236)
T 3qvo_A 186 ------------R---------NEPFKGTIVSRKSVAALITDII----DKPEKHI-GENIGINQPG 225 (236)
T ss_dssp ------------T---------TSCCSCSEEEHHHHHHHHHHHH----HSTTTTT-TEEEEEECSS
T ss_pred ------------c---------CCCCCCcEECHHHHHHHHHHHH----cCccccc-CeeEEecCCC
Confidence 0 0012467889999999999998 6665555 6666655553
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-20 Score=175.20 Aligned_cols=174 Identities=14% Similarity=0.086 Sum_probs=129.2
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+.+...+.++|++|||||+|+||++++++|+++|++|++++|+... .++.++.+|++|.+++.++++
T Consensus 10 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~ 76 (347)
T 4id9_A 10 HSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIM 76 (347)
T ss_dssp -----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHT
T ss_pred CCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHh
Confidence 3455677889999999999999999999999999999999998764 356789999999999999988
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++|+|||+|+.... +.++++..+++|+.++.++++++.+ .+ .++||++||...+.....
T Consensus 77 ---~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~~~----~~---~~~~V~~SS~~vyg~~~~----- 135 (347)
T 4id9_A 77 ---GVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAASA----AG---VRRFVFASSGEVYPENRP----- 135 (347)
T ss_dssp ---TCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHHHH----TT---CSEEEEEEEGGGTTTTSC-----
T ss_pred ---CCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHHHH----cC---CCeEEEECCHHHhCCCCC-----
Confidence 79999999996533 3344588999999999999998853 22 569999999766541000
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
. .....+..+..+...|+.+|.+.+.+++.++.+. |++++.+.|+.+.
T Consensus 136 ---------------~------~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~ 183 (347)
T 4id9_A 136 ---------------E------FLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQ 183 (347)
T ss_dssp ---------------S------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEE
T ss_pred ---------------C------CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEe
Confidence 0 0011122223334489999999999999998874 8999999999887
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.9e-20 Score=174.77 Aligned_cols=184 Identities=18% Similarity=0.168 Sum_probs=135.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh------HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK------LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~------~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
+|++|||||+|+||++++++|+++|++|++++|+... ..+..+++....+.++.++.+|++|.+++++++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 80 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY- 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence 5789999999999999999999999999999986432 223333343323557889999999999999999876
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|+||||||...... +.+++++.+++|+.++.++++++. +.+ .++||++||...+..+. ...
T Consensus 81 ~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~---~~~iv~~SS~~~~g~~~----~~~-- 143 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIMK----AHG---VKNLVFSSSATVYGNPQ----YLP-- 143 (348)
T ss_dssp CEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHH----HTT---CCEEEEEEEGGGGCSCS----SSS--
T ss_pred CCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHHH----HhC---CCEEEEECcHHHhCCCC----CCC--
Confidence 6999999999653221 345678899999999999998764 322 56999999977654100 000
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
.+...+..|... .|+.||++++.+++.++.+ ..++++..+.|+.+..+
T Consensus 144 ----~~E~~~~~p~~~-----------------~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 144 ----LDEAHPTGGCTN-----------------PYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA 191 (348)
T ss_dssp ----BCTTSCCCCCSS-----------------HHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred ----cCCCCCCCCCCC-----------------chHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence 000011112233 8999999999999999887 34699999998877655
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.1e-20 Score=175.57 Aligned_cols=186 Identities=14% Similarity=0.036 Sum_probs=142.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC----CeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG----IEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~----~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
+.++++++|||||+|+||++++++|+++|++|++++|+........+.+..... .++.++.+|++|.++++++++
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 99 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK- 99 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence 456889999999999999999999999999999999976654444444433211 578999999999999999888
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++|+|||+||.... ..+.++....+++|+.++.++++++.+. + .+++|++||...+...
T Consensus 100 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~---~~~~v~~SS~~vyg~~-------- 158 (351)
T 3ruf_A 100 --GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKNA----Q---VQSFTYAASSSTYGDH-------- 158 (351)
T ss_dssp --TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T---CSEEEEEEEGGGGTTC--------
T ss_pred --CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc----C---CCEEEEEecHHhcCCC--------
Confidence 79999999996432 1245567789999999999999988532 2 4699999998766411
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+... ..+..+..+...|+.+|.+.+.+++.++.+. |++++.+.|+.+.++..
T Consensus 159 --------------~~~~------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 210 (351)
T 3ruf_A 159 --------------PALP------KVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQ 210 (351)
T ss_dssp --------------CCSS------BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTC
T ss_pred --------------CCCC------CccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCC
Confidence 0000 1111112223389999999999999998876 89999999999987753
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.6e-20 Score=174.05 Aligned_cols=224 Identities=15% Similarity=0.172 Sum_probs=149.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCchh-HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKE--GARVSILARSGKK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
+++|||||+|+||++++++|+++ |++|++++|+... ..+. +....+.++.++.+|++|.++++++++ .+|+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 78 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---LEAILGDRVELVVGDIADAELVDKLAA---KADA 78 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---TGGGCSSSEEEEECCTTCHHHHHHHHT---TCSE
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhH---HhhhccCCeEEEECCCCCHHHHHHHhh---cCCE
Confidence 68999999999999999999999 8999999997531 1111 111113578899999999999999988 5699
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
||||||.... +.+.++++..+++|+.++.++++++.+. + ++||++||...+..............
T Consensus 79 vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~----~~~v~~SS~~vyg~~~~~~~~~~~~~--- 143 (348)
T 1oc2_A 79 IVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D----IRFHHVSTDEVYGDLPLREDLPGHGE--- 143 (348)
T ss_dssp EEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T----CEEEEEEEGGGGCCBCCGGGSTTTTC---
T ss_pred EEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C----CeEEEecccceeCCCccccccccccc---
Confidence 9999997532 2244567889999999999999999765 1 39999999765531100000000000
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcch
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~ 274 (366)
+ ......+..+..+...|+.||++.+.+++.++.++ |++++++.||.+.++.............
T Consensus 144 --------~-----~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~ 207 (348)
T 1oc2_A 144 --------G-----PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQIT 207 (348)
T ss_dssp --------S-----TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHH
T ss_pred --------c-----cCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHH
Confidence 0 00001111122233489999999999999999876 8999999999998886421000000000
Q ss_pred hhhh-----------ccCCCCCHHHHHHHHHhhhh
Q 017757 275 SIIA-----------ASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 275 ~~~~-----------~~~~~~~~~~~a~~~~~~i~ 298 (366)
.... .....+.++++++.++..+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 242 (348)
T 1oc2_A 208 NILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 242 (348)
T ss_dssp HHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhh
Confidence 0000 01135678999998887764
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-20 Score=165.87 Aligned_cols=204 Identities=15% Similarity=0.141 Sum_probs=141.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
++++||||+|+||++++++|+++|++|++++|++++.+.. ..++.++.+|++|.++++++++ .+|+|||
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~ 73 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------NEHLKVKKADVSSLDEVCEVCK---GADAVIS 73 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------CTTEEEECCCTTCHHHHHHHHT---TCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------cCceEEEEecCCCHHHHHHHhc---CCCEEEE
Confidence 7899999999999999999999999999999998764321 2578899999999999999998 6899999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
|||..... ...+++|+.++.++++++.+ .+ .+++|++||.......
T Consensus 74 ~a~~~~~~----------~~~~~~n~~~~~~l~~~~~~----~~---~~~~v~~Ss~~~~~~~----------------- 119 (227)
T 3dhn_A 74 AFNPGWNN----------PDIYDETIKVYLTIIDGVKK----AG---VNRFLMVGGAGSLFIA----------------- 119 (227)
T ss_dssp CCCC----------------CCSHHHHHHHHHHHHHHH----TT---CSEEEEECCSTTSEEE-----------------
T ss_pred eCcCCCCC----------hhHHHHHHHHHHHHHHHHHH----hC---CCEEEEeCChhhccCC-----------------
Confidence 99864211 12788999999988888743 22 4699999998766411
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhh-
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSI- 276 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~- 276 (366)
++.. ....+..+...|+.+|++.+.+.+.++.+ .|++++.+.||.+.++...............
T Consensus 120 -----~~~~-------~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~ 184 (227)
T 3dhn_A 120 -----PGLR-------LMDSGEVPENILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIV 184 (227)
T ss_dssp -----TTEE-------GGGTTCSCGGGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEEESSBCCC
T ss_pred -----CCCc-------cccCCcchHHHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceeecCCCccc
Confidence 1000 00111122338999999999888887763 5899999999999776432211000000000
Q ss_pred hhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 277 IAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 277 ~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
.......+.++++++.++..+..++
T Consensus 185 ~~~~~~~i~~~Dva~ai~~~l~~~~ 209 (227)
T 3dhn_A 185 DIVGNSHISVEDYAAAMIDELEHPK 209 (227)
T ss_dssp CTTSCCEEEHHHHHHHHHHHHHSCC
T ss_pred CCCCCcEEeHHHHHHHHHHHHhCcc
Confidence 0011224567788777777775543
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=171.27 Aligned_cols=212 Identities=13% Similarity=0.112 Sum_probs=140.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
.++|||||+|+||++++++|+++|++|++++|+.++.++ +. ..++.++.+|++|.++++++++ ++|+|||
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~---~~~~~~~~~Dl~d~~~~~~~~~---~~d~vih 83 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LA---YLEPECRVAEMLDHAGLERALR---GLDGVIF 83 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GG---GGCCEEEECCTTCHHHHHHHTT---TCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hc---cCCeEEEEecCCCHHHHHHHHc---CCCEEEE
Confidence 489999999999999999999999999999998765432 11 1267889999999999998887 6999999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+||... .+.+++++.+++|+.++.++++++.+. + .++||++||...+....... . ++.
T Consensus 84 ~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~---~~~~v~~SS~~~~~~~~~~~--------~-~~E 141 (342)
T 2x4g_A 84 SAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----R---VPRILYVGSAYAMPRHPQGL--------P-GHE 141 (342)
T ss_dssp C------------------CHHHHHHHHHHHHHHHHHHH----T---CSCEEEECCGGGSCCCTTSS--------C-BCT
T ss_pred CCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C---CCeEEEECCHHhhCcCCCCC--------C-CCC
Confidence 999643 234567889999999999999999764 2 46999999987764111000 0 000
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh-h----hhhhc--C
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL-E----EENKR--R 270 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~-~----~~~~~--~ 270 (366)
..+..|.. .....|+.+|++.+.+++.++. . |+++++|.||.+.++.. . ..... .
T Consensus 142 ~~~~~p~~--------------~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~ 203 (342)
T 2x4g_A 142 GLFYDSLP--------------SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGN 203 (342)
T ss_dssp TCCCSSCC--------------TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHT
T ss_pred CCCCCccc--------------cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHc
Confidence 01111100 0023899999999999999886 3 89999999999988754 1 00000 0
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
......-......+.++++++.++..+..
T Consensus 204 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~ 232 (342)
T 2x4g_A 204 GEMTHYVAGQRNVIDAAEAGRGLLMALER 232 (342)
T ss_dssp TCCCEEECCEEEEEEHHHHHHHHHHHHHH
T ss_pred CCCccccCCCcceeeHHHHHHHHHHHHhC
Confidence 00000000111245789999888877643
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=175.09 Aligned_cols=227 Identities=15% Similarity=0.004 Sum_probs=154.4
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
++..++.+++++|||||+|+||++++++|+++|++|++++|+....... ...++.++.+|++|.++++++++
T Consensus 21 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~- 92 (379)
T 2c5a_A 21 REQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------DMFCDEFHLVDLRVMENCLKVTE- 92 (379)
T ss_dssp CCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------GGTCSEEEECCTTSHHHHHHHHT-
T ss_pred ccccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------ccCCceEEECCCCCHHHHHHHhC-
Confidence 3455666789999999999999999999999999999999987543211 12367789999999999999987
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++|+|||+||......+ +.++++..+++|+.++.++++++.+ .+ .++||++||...+........
T Consensus 93 --~~d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~~---~~~~V~~SS~~v~~~~~~~~~--- 157 (379)
T 2c5a_A 93 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARI----NG---IKRFFYASSACIYPEFKQLET--- 157 (379)
T ss_dssp --TCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TT---CSEEEEEEEGGGSCGGGSSSS---
T ss_pred --CCCEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHHH----cC---CCEEEEEeehheeCCCCCCCc---
Confidence 79999999997532111 1345678899999999999998853 22 469999999765541100000
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh---
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE--- 265 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~--- 265 (366)
......+.. +.+..+...|+.+|++.+.+++.++.++ |+++++|.||.+.++....
T Consensus 158 -~~~~~~E~~-----------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~ 216 (379)
T 2c5a_A 158 -TNVSLKESD-----------------AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGG 216 (379)
T ss_dssp -SSCEECGGG-----------------GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSS
T ss_pred -cCCCcCccc-----------------CCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccc
Confidence 000000000 0012223389999999999999998875 8999999999998875321
Q ss_pred -------hh----hcCCcchhhh--hccCCCCCHHHHHHHHHhhhhC
Q 017757 266 -------EN----KRRPRLTSII--AASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 266 -------~~----~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
.. ...+.....- ......+.++++++.++..+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 263 (379)
T 2c5a_A 217 REKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS 263 (379)
T ss_dssp CCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred cccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhc
Confidence 00 0000000000 0012356799999998887754
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.3e-19 Score=155.25 Aligned_cols=156 Identities=15% Similarity=0.165 Sum_probs=118.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++++++||||+|+||++++++|+++|++|++++|++++.+.. ...++.++.+|++|+++++++++ .+|++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~---~~d~v 71 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------GPRPAHVVVGDVLQAADVDKTVA---GQDAV 71 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------SCCCSEEEESCTTSHHHHHHHHT---TCSEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-------cCCceEEEEecCCCHHHHHHHHc---CCCEE
Confidence 357999999999999999999999999999999998654321 13468899999999999999887 68999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
|||||...... + .++|+.++..+++++.+ .+ .+++|++||...+.
T Consensus 72 i~~a~~~~~~~-----~------~~~n~~~~~~~~~~~~~----~~---~~~~v~~Ss~~~~~----------------- 116 (206)
T 1hdo_A 72 IVLLGTRNDLS-----P------TTVMSEGARNIVAAMKA----HG---VDKVVACTSAFLLW----------------- 116 (206)
T ss_dssp EECCCCTTCCS-----C------CCHHHHHHHHHHHHHHH----HT---CCEEEEECCGGGTS-----------------
T ss_pred EECccCCCCCC-----c------cchHHHHHHHHHHHHHH----hC---CCeEEEEeeeeecc-----------------
Confidence 99999754411 1 24788888888777653 22 46999999986543
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC-CCC
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT-ETP 261 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v-~T~ 261 (366)
..+... .+...|+.+|++++.+.+. .|+++++|.||.+ .++
T Consensus 117 -----~~~~~~-------------~~~~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~ 158 (206)
T 1hdo_A 117 -----DPTKVP-------------PRLQAVTDDHIRMHKVLRE-------SGLKYVAVMPPHIGDQP 158 (206)
T ss_dssp -----CTTCSC-------------GGGHHHHHHHHHHHHHHHH-------TCSEEEEECCSEEECCC
T ss_pred -----Cccccc-------------ccchhHHHHHHHHHHHHHh-------CCCCEEEEeCCcccCCC
Confidence 111000 0122899999999988742 5899999999998 443
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=171.00 Aligned_cols=188 Identities=12% Similarity=0.084 Sum_probs=131.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHh
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.+.++++++|||||+|+||++++++|+++| ++|+..+|...... .+.+... ...++.++.+|++|.++++++++.
T Consensus 19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 96 (346)
T 4egb_A 19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE 96 (346)
T ss_dssp -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh
Confidence 345778999999999999999999999999 67777777642111 1111111 124789999999999999999986
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
. ++|+|||+||...... ..++.+..+++|+.++.++++++.+. + .+++|++||...+......
T Consensus 97 ~-~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~----~---~~~~v~~SS~~vy~~~~~~----- 159 (346)
T 4egb_A 97 R-DVQVIVNFAAESHVDR----SIENPIPFYDTNVIGTVTLLELVKKY----P---HIKLVQVSTDEVYGSLGKT----- 159 (346)
T ss_dssp H-TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS----T---TSEEEEEEEGGGGCCCCSS-----
T ss_pred c-CCCEEEECCcccchhh----hhhCHHHHHHHHHHHHHHHHHHHHhc----C---CCEEEEeCchHHhCCCCcC-----
Confidence 4 5899999999764422 45667889999999999999988543 2 5689999998665411000
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
....+..+..+...|+.+|.+.+.+++.++.+. |++++.+.||.+.++..
T Consensus 160 ----------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 209 (346)
T 4egb_A 160 ----------------------GRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQ 209 (346)
T ss_dssp ----------------------CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred ----------------------CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCC
Confidence 001111222233489999999999999998875 89999999999887753
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3e-19 Score=169.87 Aligned_cols=190 Identities=16% Similarity=0.060 Sum_probs=143.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHH-HCCCeEEEEecCchhH------------HHHHHHHHhhcCCeEEEEEecCCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAA-KEGARVSILARSGKKL------------EEAKQSIQLATGIEVATYSADVRD 98 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~-~~G~~V~l~~r~~~~~------------~~~~~~l~~~~~~~v~~~~~Dls~ 98 (366)
.....+|++|||||++|||+|++..|+ +.|++++++++..+.. ....+++++ .|.+...+.||+++
T Consensus 45 ~~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~-~G~~a~~i~~Dv~d 123 (401)
T 4ggo_A 45 AGAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR-EGLYSVTIDGDAFS 123 (401)
T ss_dssp TTSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-HTCCEEEEESCTTS
T ss_pred cccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHH-cCCCceeEeCCCCC
Confidence 345678999999999999999999999 6899999998865422 233334443 37899999999999
Q ss_pred HHHHHHHHHh----cCCCcEEEEcCCCCCCCC----------------------------------ccCCCHHHHHHHHH
Q 017757 99 FDAVKTALDE----AGPVDVLVVNQGVFVPGE----------------------------------LEVQSLDEVRLMID 140 (366)
Q Consensus 99 ~~~v~~~~~~----~~~id~vi~nAG~~~~~~----------------------------------~~~~~~~~~~~~~~ 140 (366)
++++++++++ +|++|+||||++...... +...+.++++.+..
T Consensus 124 ~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~ 203 (401)
T 4ggo_A 124 DEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVK 203 (401)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHH
Confidence 9999888766 699999999999753210 11235666665555
Q ss_pred H---HHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccc
Q 017757 141 V---NITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQF 217 (366)
Q Consensus 141 v---N~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (366)
+ ...+.+...+...++|.+ .++++.+|+..+.. ..|.+.
T Consensus 204 vMg~s~~s~w~~al~~a~lla~-----G~siva~SYiGse~----------------------t~P~Y~----------- 245 (401)
T 4ggo_A 204 VMGGEDWERWIKQLSKEGLLEE-----GCITLAYSYIGPEA----------------------TQALYR----------- 245 (401)
T ss_dssp HHSSHHHHHHHHHHHHTTCEEE-----EEEEEEEECCCCGG----------------------GHHHHT-----------
T ss_pred HHhhhHHHHHHHHHHhhhcccC-----CceEEEEeccCcce----------------------eecCCC-----------
Confidence 4 555556666666666655 57999999987754 333321
Q ss_pred cccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 218 CLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 218 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
...++++|++|+..++.|+.++++ +++|+++||.+.|......
T Consensus 246 ----~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT~AssaI 288 (401)
T 4ggo_A 246 ----KGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVTRASAVI 288 (401)
T ss_dssp ----TSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCCTTGGGS
T ss_pred ----ccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccccchhhcC
Confidence 116899999999999999999974 8999999999999976543
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=168.95 Aligned_cols=207 Identities=14% Similarity=0.083 Sum_probs=143.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
|++|||||+|+||++++++|+++|..|++..|+....+.. ...+.++.+|+++ +++.++++ .+|+|||
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~Dl~~-~~~~~~~~---~~d~vih 69 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV--------NEAARLVKADLAA-DDIKDYLK---GAEEVWH 69 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS--------CTTEEEECCCTTT-SCCHHHHT---TCSEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc--------CCCcEEEECcCCh-HHHHHHhc---CCCEEEE
Confidence 5799999999999999999999995555555544332211 3468899999999 88888887 7999999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+|+.... +.+.++++..+++|+.++.++++++.. .+ .++||++||...+..+
T Consensus 70 ~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~---~~~iv~~SS~~vyg~~----------------- 121 (313)
T 3ehe_A 70 IAANPDV----RIGAENPDEIYRNNVLATYRLLEAMRK----AG---VSRIVFTSTSTVYGEA----------------- 121 (313)
T ss_dssp CCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHHHH----HT---CCEEEEECCGGGGCSC-----------------
T ss_pred CCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cC---CCeEEEeCchHHhCcC-----------------
Confidence 9995432 234566788999999999999988643 32 5699999998766410
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh-----h----hh
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE-----E----NK 268 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~-----~----~~ 268 (366)
... ...+..+..+...|+.||++.+.+++.++.++ |++++.+.|+.+.++.... . ..
T Consensus 122 -----~~~------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~ 187 (313)
T 3ehe_A 122 -----KVI------PTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKR 187 (313)
T ss_dssp -----SSS------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHH
T ss_pred -----CCC------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHc
Confidence 000 01111122233489999999999999999875 8999999999998874321 0 00
Q ss_pred cCCcchhhh--hccCCCCCHHHHHHHHHhhhh
Q 017757 269 RRPRLTSII--AASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 269 ~~~~~~~~~--~~~~~~~~~~~~a~~~~~~i~ 298 (366)
........- .....++..+++++.++..+.
T Consensus 188 ~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~ 219 (313)
T 3ehe_A 188 NPEELEILGNGEQNKSYIYISDCVDAMLFGLR 219 (313)
T ss_dssp CTTEEEESTTSCCEECCEEHHHHHHHHHHHTT
T ss_pred CCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc
Confidence 000000000 011235678999999888776
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.3e-19 Score=170.38 Aligned_cols=182 Identities=13% Similarity=0.055 Sum_probs=125.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH-HHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE-EAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~-~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+|+++||||+|+||++++++|+++|++|++++|+.+... +..+.+... .+.++.++.+|++|.++++++++.. ++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~ 79 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-QP 79 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-CC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-CC
Confidence 478999999999999999999999999999999865421 111122111 1347889999999999999999876 68
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+||||||..... .+.++++..+++|+.++.++++++.+...++ .++||++||.+.+....
T Consensus 80 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~iv~~SS~~v~g~~~----------- 140 (372)
T 1db3_A 80 DEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLEK----KTRFYQASTSELYGLVQ----------- 140 (372)
T ss_dssp SEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT----TCEEEEEEEGGGGTTCC-----------
T ss_pred CEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCC----CcEEEEeCChhhhCCCC-----------
Confidence 9999999975432 2345567889999999999999997654321 36999999977654110
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
.. +..+..+..+...|+.||++++.+++.++.++ ++.+..+.|..+
T Consensus 141 -----------~~------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~ 186 (372)
T 1db3_A 141 -----------EI------PQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNH 186 (372)
T ss_dssp -----------SS------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred -----------CC------CCCccCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCc
Confidence 00 00111111223389999999999999999876 555555554443
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.9e-19 Score=169.36 Aligned_cols=226 Identities=14% Similarity=-0.006 Sum_probs=149.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-----HHHHHHHHHhhcCC-eEEEEEecCCCHHHHHHHHHhcCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-----LEEAKQSIQLATGI-EVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~-~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
|++|||||+|+||++++++|+++|++|++++|+.+. ++...+.+... +. ++.++.+|++|.+++.++++.. +
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-~ 106 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASSLRRWIDVI-K 106 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH-C
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc-cccceEEEECCCCCHHHHHHHHHhc-C
Confidence 789999999999999999999999999999998654 22221111111 22 6888999999999999999876 6
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+||||||.... ..+.++++..+++|+.++.++++++.+...+++. .++||++||...+..... .
T Consensus 107 ~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~--~~~~v~~SS~~vyg~~~~-----~--- 172 (381)
T 1n7h_A 107 PDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGR--TVKYYQAGSSEMFGSTPP-----P--- 172 (381)
T ss_dssp CSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC--CCEEEEEEEGGGGTTSCS-----S---
T ss_pred CCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC--ccEEEEeCcHHHhCCCCC-----C---
Confidence 8999999996532 1245678899999999999999999998765321 469999999876541000 0
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc---CCcEEEEEcCCCCCCCChh---h
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA---DDIHVSLIFPPDTETPGLE---E 265 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~---~gI~Vn~V~PG~v~T~~~~---~ 265 (366)
..+..+..+...|+.+|++.+.+++.++.++.- ....++.+.||...+.... .
T Consensus 173 ---------------------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~ 231 (381)
T 1n7h_A 173 ---------------------QSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITR 231 (381)
T ss_dssp ---------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHH
T ss_pred ---------------------CCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHH
Confidence 011111222338999999999999999987631 1123345666654432111 1
Q ss_pred hh----hcCCcchhh--hhccCCCCCHHHHHHHHHhhhhCC
Q 017757 266 EN----KRRPRLTSI--IAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 266 ~~----~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
.. ......... ......++.++++++.++..+..+
T Consensus 232 ~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~ 272 (381)
T 1n7h_A 232 ALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE 272 (381)
T ss_dssp HHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred HHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence 00 000000000 001123567999999998887653
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-19 Score=167.19 Aligned_cols=179 Identities=20% Similarity=0.170 Sum_probs=126.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++|||||+|+||++++++|+++|++|++++|......+..+.+....+.++.++.+|++|+++++++++.. ++|+||||
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~D~vih~ 80 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-AIDTVIHF 80 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-TCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-CCCEEEEC
Confidence 68999999999999999999999999999875332122222333222456788999999999999999875 69999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||...... ..++.++.+++|+.++.++++++. +.+ .++||++||.+.+..+. .... +..
T Consensus 81 A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~---~~~iv~~SS~~~~g~~~----~~~~------~e~ 139 (338)
T 1udb_A 81 AGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AAN---VKNFIFSSSATVYGDNP----KIPY------VES 139 (338)
T ss_dssp CSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHH----HHT---CCEEEEEEEGGGGCSCC----SSSB------CTT
T ss_pred CccCcccc----chhcHHHHHHHHHHHHHHHHHHHH----hcC---CCeEEEEccHHHhCCCC----CCCc------Ccc
Confidence 99653211 234567789999999999988753 332 46999999976553100 0000 000
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
.+..+... .|++||++++.+++.++.+. .++++..+.|+.+
T Consensus 140 ~~~~~~~~-----------------~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v 180 (338)
T 1udb_A 140 FPTGTPQS-----------------PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNP 180 (338)
T ss_dssp SCCCCCSS-----------------HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEE
T ss_pred cCCCCCCC-----------------hHHHHHHHHHHHHHHHHHhc--CCCceEEEeecee
Confidence 01111233 89999999999999999874 3788877776443
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.2e-20 Score=171.57 Aligned_cols=172 Identities=14% Similarity=0.095 Sum_probs=131.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
+++|||||+|+||++++++|+++|++|++++|+.+...+. ....+.++.+|++|.+ +.++++ . |+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dl~d~~-~~~~~~---~-d~vih 68 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-------VNPSAELHVRDLKDYS-WGAGIK---G-DVVFH 68 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-------SCTTSEEECCCTTSTT-TTTTCC---C-SEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-------cCCCceEEECccccHH-HHhhcC---C-CEEEE
Confidence 4799999999999999999999999999999987643221 1346788999999988 666555 3 99999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+||.... +.+.++++..+++|+.++.++++++... + .++||++||...+..+
T Consensus 69 ~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~---~~~iv~~SS~~vyg~~----------------- 120 (312)
T 3ko8_A 69 FAANPEV----RLSTTEPIVHFNENVVATFNVLEWARQT----G---VRTVVFASSSTVYGDA----------------- 120 (312)
T ss_dssp CCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHHHH----T---CCEEEEEEEGGGGCSC-----------------
T ss_pred CCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C---CCEEEEeCcHHHhCCC-----------------
Confidence 9996432 2355567788999999999999988432 2 4699999998766411
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
... ...+..+..+...|+.||++.+.+++.++.++ |++++.+.||.+.++..
T Consensus 121 -----~~~------~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~ 172 (312)
T 3ko8_A 121 -----DVI------PTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRL 172 (312)
T ss_dssp -----SSS------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred -----CCC------CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCC
Confidence 000 01111222333489999999999999999987 89999999999998863
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.8e-19 Score=165.44 Aligned_cols=223 Identities=13% Similarity=-0.004 Sum_probs=147.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH-HHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE-EAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+-.++++|||||+|+||++++++|+++|++|++++|+..... ...+.+. ...++.++.+|++|.++++++++.. ++
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-~~ 87 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKA-QP 87 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHH-CC
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc--ccCceEEEECCCCCHHHHHHHHHHc-CC
Confidence 346889999999999999999999999999999999865421 1111221 1346888999999999999999866 68
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+||||||..... .+.++++..+++|+.++.++++++.+. + ..+++|++||...+...
T Consensus 88 d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--~~~~~v~~SS~~v~g~~------------ 145 (335)
T 1rpn_A 88 QEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF----S--PETRFYQASTSEMFGLI------------ 145 (335)
T ss_dssp SEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH----C--TTSEEEEEEEGGGGCSC------------
T ss_pred CEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh----C--CCCeEEEEeCHHHhCCC------------
Confidence 9999999964321 122356789999999999999998653 1 02699999997665411
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh-------
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE------- 265 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~------- 265 (366)
+... ..+..+..+...|+.||++.+.+++.++.++ ++++..+.|+.+..+....
T Consensus 146 ----------~~~~------~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~ 206 (335)
T 1rpn_A 146 ----------QAER------QDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKV 206 (335)
T ss_dssp ----------SSSS------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHH
T ss_pred ----------CCCC------CCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHH
Confidence 0000 0111111222389999999999999998875 6788888887776553211
Q ss_pred --hh----hcCCcchhhh--hccCCCCCHHHHHHHHHhhhhCC
Q 017757 266 --EN----KRRPRLTSII--AASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 266 --~~----~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
.. .........- .....++..+++++.++..+..+
T Consensus 207 ~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~ 249 (335)
T 1rpn_A 207 TDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 249 (335)
T ss_dssp HHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC
Confidence 00 0000000000 00112557899999988887653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.1e-19 Score=170.33 Aligned_cols=184 Identities=14% Similarity=0.035 Sum_probs=131.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-----HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-----LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
|++|||||+|+||++++++|+++|++|++++|+.+. ++...+......+.++.++.+|++|.+++.++++.. ++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~ 103 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-KP 103 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-CC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-CC
Confidence 789999999999999999999999999999998643 221111110001346888999999999999999876 68
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+||||||..... .+.++++..+++|+.++.++++++.+...+. .++||++||...+...
T Consensus 104 d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~----~~~iv~~SS~~~~~~~------------ 163 (375)
T 1t2a_A 104 TEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN----SVKFYQASTSELYGKV------------ 163 (375)
T ss_dssp SEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT----TCEEEEEEEGGGTCSC------------
T ss_pred CEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCc----cceEEEecchhhhCCC------------
Confidence 9999999964321 2356778899999999999999997654311 2699999998765411
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+.. ++.+..+..+...|+.||++++.+++.++.++ ++++..+.|+.+..|
T Consensus 164 ----------~~~------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp 213 (375)
T 1t2a_A 164 ----------QEI------PQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP 213 (375)
T ss_dssp ----------SSS------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred ----------CCC------CCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCC
Confidence 000 00111111222389999999999999999875 677777776655443
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=170.20 Aligned_cols=189 Identities=15% Similarity=0.175 Sum_probs=122.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-Cchh---HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKK---LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~---~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
||++|||||+|+||++++++|+++|++|+++.| +.+. .+.. .++.. ...++.++.+|++|.++++++++ .+
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~---~~ 75 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPG-ASEKLHFFNADLSNPDSFAAAIE---GC 75 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTT-HHHHEEECCCCTTCGGGGHHHHT---TC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-Hhhhc-cCCceEEEecCCCCHHHHHHHHc---CC
Confidence 689999999999999999999999999999998 6532 1111 11110 01257888999999999999887 68
Q ss_pred cEEEEcCCCCCCCCccCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDE-VRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
|+|||+|+.. . .+.++ .++++++|+.++.++++++.+.. + .++||++||..+........
T Consensus 76 d~vih~A~~~---~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~---~~~iV~~SS~~~~~~~~~~~------- 136 (322)
T 2p4h_X 76 VGIFHTASPI---D---FAVSEPEEIVTKRTVDGALGILKACVNSK---T---VKRFIYTSSGSAVSFNGKDK------- 136 (322)
T ss_dssp SEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS---S---CCEEEEEEEGGGTSCSSSCC-------
T ss_pred CEEEEcCCcc---c---CCCCChHHHHHHHHHHHHHHHHHHHHhcC---C---ccEEEEeccHHHcccCCCCC-------
Confidence 9999999632 1 12222 35689999999999999986431 1 57999999987654110000
Q ss_pred cccccccCCCCCCcccccccccccccccc-ccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLL-GTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
....+ . . |.......+.. ....|+.||++.+.+++.++.+ +|+++++|.||.+.+++.
T Consensus 137 ~~~~e-~--~--------~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~ 195 (322)
T 2p4h_X 137 DVLDE-S--D--------WSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFV 195 (322)
T ss_dssp SEECT-T--C--------CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCC
T ss_pred eecCC-c--c--------ccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCC
Confidence 00000 0 0 00000000001 1116999999766665554432 589999999999998864
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=154.73 Aligned_cols=202 Identities=13% Similarity=0.115 Sum_probs=130.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||+|+||++++++|+++|++|++++|+.+++++. ...++.++.+|++|.++ +.++++|+||||
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~~~D~~d~~~-----~~~~~~d~vi~~ 69 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-------LGATVATLVKEPLVLTE-----ADLDSVDAVVDA 69 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------TCTTSEEEECCGGGCCH-----HHHTTCSEEEEC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-------cCCCceEEecccccccH-----hhcccCCEEEEC
Confidence 599999999999999999999999999999998765532 13468889999999888 334579999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||...... ..++|+.++..+++++ ++. .+++|++||..+...
T Consensus 70 ag~~~~~~-----------~~~~n~~~~~~l~~a~----~~~----~~~~v~~SS~~~~~~------------------- 111 (224)
T 3h2s_A 70 LSVPWGSG-----------RGYLHLDFATHLVSLL----RNS----DTLAVFILGSASLAM------------------- 111 (224)
T ss_dssp CCCCTTSS-----------CTHHHHHHHHHHHHTC----TTC----CCEEEEECCGGGSBC-------------------
T ss_pred CccCCCcc-----------hhhHHHHHHHHHHHHH----HHc----CCcEEEEecceeecc-------------------
Confidence 99862211 1356777766555554 443 279999999876541
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhh
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIA 278 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~ 278 (366)
.+.... ..........+...|+.+|++.+.+ + ......|++++.|.||.+.++.................
T Consensus 112 ---~~~~~~---~~~~~~~~~~~~~~y~~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~ 181 (224)
T 3h2s_A 112 ---PGADHP---MILDFPESAASQPWYDGALYQYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGE 181 (224)
T ss_dssp ---TTCSSC---GGGGCCGGGGGSTTHHHHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCT
T ss_pred ---CCCCcc---ccccCCCCCccchhhHHHHHHHHHH-H---HHHhcCCCcEEEEcCccccCCCcccCceecccccccCC
Confidence 111000 0000000111133799999988854 2 22235689999999999998732211000000000111
Q ss_pred ccCCCCCHHHHHHHHHhhhhCC
Q 017757 279 ASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 279 ~~~~~~~~~~~a~~~~~~i~~g 300 (366)
.....+.++++++.++..+...
T Consensus 182 ~~~~~i~~~DvA~~~~~~l~~~ 203 (224)
T 3h2s_A 182 DGQSHITTGNMALAILDQLEHP 203 (224)
T ss_dssp TSCCBCCHHHHHHHHHHHHHSC
T ss_pred CCCceEeHHHHHHHHHHHhcCc
Confidence 1234678899999888887654
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-19 Score=168.48 Aligned_cols=177 Identities=16% Similarity=0.147 Sum_probs=131.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHC---C---CeEEEEecCch--hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 39 HVFITGGSSGIGLALAHQAAKE---G---ARVSILARSGK--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~---G---~~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
++|||||+|+||++++++|+++ | ++|++++|+.. ..+.+ +.+. .+.++.++.+|++|.+++++++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--- 75 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD--ADPRLRFVHGDIRDAGLLARELR--- 75 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT--TCTTEEEEECCTTCHHHHHHHTT---
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc--cCCCeEEEEcCCCCHHHHHHHhc---
Confidence 6999999999999999999997 8 99999999642 11111 1111 13578899999999999988874
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|+||||||.... +.+.++++..+++|+.++.++++++.+. + .++||++||...+.... . ..
T Consensus 76 ~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~---~~~~v~~SS~~vyg~~~-~---~~-- 138 (337)
T 1r6d_A 76 GVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----G---VGRVVHVSTNQVYGSID-S---GS-- 138 (337)
T ss_dssp TCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T---CCEEEEEEEGGGGCCCS-S---SC--
T ss_pred CCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C---CCEEEEecchHHhCCCC-C---CC--
Confidence 79999999996532 1234567789999999999999998764 1 46999999976653110 0 00
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
..+..+..+...|+.||++.+.+++.++.++ |++++.+.||.+.++..
T Consensus 139 ----------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~ 186 (337)
T 1r6d_A 139 ----------------------WTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ 186 (337)
T ss_dssp ----------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred ----------------------CCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCC
Confidence 0011112223389999999999999999875 79999999999988764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.7e-19 Score=168.04 Aligned_cols=215 Identities=13% Similarity=0.063 Sum_probs=135.1
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
.....++++++|||||+|+||++++++|+++|++|++++|+.....+. +.. -.++.++.+|++|.++++++++..
T Consensus 14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (333)
T 2q1w_A 14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD--HPNLTFVEGSIADHALVNQLIGDL 88 (333)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC--CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh--cCCceEEEEeCCCHHHHHHHHhcc
Confidence 344567899999999999999999999999999999999976432111 110 036788999999999999999853
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
++|+||||||..... +.++++ +++|+.++.++++++.+. + .++||++||...+..+.....
T Consensus 89 -~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~---~~~iV~~SS~~~~g~~~~~~~---- 149 (333)
T 2q1w_A 89 -QPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKKN----N---VGRFVYFQTALCYGVKPIQQP---- 149 (333)
T ss_dssp -CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHT----T---CSEEEEEEEGGGGCSCCCSSS----
T ss_pred -CCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHHh----C---CCEEEEECcHHHhCCCcccCC----
Confidence 599999999976432 234444 999999999999998652 2 579999999765420000000
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHH-HHhHhccCCcEEEEEcCCCCCCCC-----h
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEA-LQQEVIADDIHVSLIFPPDTETPG-----L 263 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~-la~e~~~~gI~Vn~V~PG~v~T~~-----~ 263 (366)
....+.. .|... .|+.+|++++.+++. ++ ++..|.|+.+..+. .
T Consensus 150 --~~~~E~~---~p~~~-----------------~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~ 199 (333)
T 2q1w_A 150 --VRLDHPR---NPANS-----------------SYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPL 199 (333)
T ss_dssp --BCTTSCC---CCTTC-----------------HHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHH
T ss_pred --CCcCCCC---CCCCC-----------------chHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHH
Confidence 0000000 11113 899999999999887 65 34445555444332 1
Q ss_pred hhhhhc--CC-cchhhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 264 EEENKR--RP-RLTSIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 264 ~~~~~~--~~-~~~~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
...... .. .... .......+.++++++.++..+..
T Consensus 200 ~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~~~~~ 237 (333)
T 2q1w_A 200 PIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVRAVDG 237 (333)
T ss_dssp HHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHHHHhc
Confidence 111000 00 0000 01122356788888888777654
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.79 E-value=8.5e-19 Score=168.51 Aligned_cols=190 Identities=13% Similarity=0.156 Sum_probs=133.8
Q ss_pred cCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCC-CHHHHHH
Q 017757 27 RPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR-DFDAVKT 104 (366)
Q Consensus 27 ~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls-~~~~v~~ 104 (366)
.+++...+++++++|||||+|+||++++++|+++ |++|++++|+.++.+...+ ..++.++.+|++ |.+++++
T Consensus 14 ~~~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~~d~~~~~~ 87 (372)
T 3slg_A 14 AQTQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK------HERMHFFEGDITINKEWVEY 87 (372)
T ss_dssp ---------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG------STTEEEEECCTTTCHHHHHH
T ss_pred hhhcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc------CCCeEEEeCccCCCHHHHHH
Confidence 3455556788999999999999999999999998 9999999998765443211 347899999999 9999999
Q ss_pred HHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 105 ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 105 ~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
+++ ++|+|||+|+...+.. ..++.+..+++|+.++.++++++... ..++|++||...+.....
T Consensus 88 ~~~---~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~v~~SS~~vyg~~~~-- 150 (372)
T 3slg_A 88 HVK---KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVKY--------GKHLVFPSTSEVYGMCAD-- 150 (372)
T ss_dssp HHH---HCSEEEECBCCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHHHH--------TCEEEEECCGGGGBSCCC--
T ss_pred Hhc---cCCEEEEcCccccHHH----HhhCHHHHHHHHHHHHHHHHHHHHHh--------CCcEEEeCcHHHhCCCCC--
Confidence 998 6899999999754321 23456778999999999998888543 149999999665431100
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
..+.++.......+.. .+...|+.+|.+.+.+++.++.+ |++++.+.|+.+.++.
T Consensus 151 --~~~~e~~~~~~~~p~~-----------------~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~ 205 (372)
T 3slg_A 151 --EQFDPDASALTYGPIN-----------------KPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPG 205 (372)
T ss_dssp --SSBCTTTCCEEECCTT-----------------CTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSS
T ss_pred --CCCCccccccccCCCC-----------------CCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCC
Confidence 0000000000000000 12238999999999999988875 8999999999998775
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=164.30 Aligned_cols=175 Identities=13% Similarity=0.151 Sum_probs=132.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
++++||||+|+||++++++|+++|++|++++|+..... +.+ ..++.++.+|++|.+++++++++. ++|+|||
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~----~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vih 73 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI----TEGAKFYNGDLRDKAFLRDVFTQE-NIEAVMH 73 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS----CTTSEEEECCTTCHHHHHHHHHHS-CEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc----CCCcEEEECCCCCHHHHHHHHhhc-CCCEEEE
Confidence 57999999999999999999999999999999764322 111 226788999999999999999874 7999999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+||..... .+.++++..+++|+.++.++++++.. .+ .+++|++||...+..+. ...
T Consensus 74 ~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~---~~~~v~~Ss~~~~~~~~----~~~--------- 129 (330)
T 2c20_A 74 FAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMDE----FK---VDKFIFSSTAATYGEVD----VDL--------- 129 (330)
T ss_dssp CCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TT---CCEEEEECCGGGGCSCS----SSS---------
T ss_pred CCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHHH----cC---CCEEEEeCCceeeCCCC----CCC---------
Confidence 99975321 14466788999999999999998742 22 56999999976653100 000
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.+..+..+...|+.+|++.+.+++.++.++ |++++.+.||.+.++.
T Consensus 130 ---------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~ 176 (330)
T 2c20_A 130 ---------------ITEETMTNPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT 176 (330)
T ss_dssp ---------------BCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred ---------------CCcCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence 0111111223389999999999999998764 8999999998887663
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-18 Score=152.22 Aligned_cols=200 Identities=14% Similarity=0.181 Sum_probs=123.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||+|+||++++++|+++|++|++++|+++++++.. ..+.++.+|++|+++ +.++++|+||||
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~D~~d~~~-----~~~~~~d~vi~~ 68 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------KDINILQKDIFDLTL-----SDLSDQNVVVDA 68 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------SSSEEEECCGGGCCH-----HHHTTCSEEEEC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------CCCeEEeccccChhh-----hhhcCCCEEEEC
Confidence 5999999999999999999999999999999987655431 467889999999887 334579999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||.... ..++|+.++.. +++.+++.+ .+++|++||..+...
T Consensus 69 ag~~~~-------------~~~~~~~~~~~----l~~a~~~~~---~~~~v~~SS~~~~~~------------------- 109 (221)
T 3ew7_A 69 YGISPD-------------EAEKHVTSLDH----LISVLNGTV---SPRLLVVGGAASLQI------------------- 109 (221)
T ss_dssp CCSSTT-------------TTTSHHHHHHH----HHHHHCSCC---SSEEEEECCCC-----------------------
T ss_pred CcCCcc-------------ccchHHHHHHH----HHHHHHhcC---CceEEEEecceEEEc-------------------
Confidence 997432 13345555554 455555543 579999999887651
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh-hhcCCcchhhh
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE-NKRRPRLTSII 277 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~-~~~~~~~~~~~ 277 (366)
.+... ......+..+...|+.+|++.+.+. .+.. ...|++++.|.||.+.++..... ...........
T Consensus 110 ---~~~~~-----~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~ 178 (221)
T 3ew7_A 110 ---DEDGN-----TLLESKGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFG 178 (221)
T ss_dssp -----------------------CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC----------------
T ss_pred ---CCCCc-----cccccCCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccceec
Confidence 11100 0000001112226999999888862 2322 15689999999999998722111 00000000011
Q ss_pred hccCCCCCHHHHHHHHHhhhhCCC
Q 017757 278 AASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 278 ~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
......++++++++.++..+..++
T Consensus 179 ~~~~~~i~~~Dva~~~~~~l~~~~ 202 (221)
T 3ew7_A 179 SDGNSFISMEDYAIAVLDEIERPN 202 (221)
T ss_dssp -----CCCHHHHHHHHHHHHHSCS
T ss_pred CCCCceEeHHHHHHHHHHHHhCcc
Confidence 111236788888888888876543
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.2e-19 Score=168.59 Aligned_cols=177 Identities=14% Similarity=0.092 Sum_probs=128.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AG 110 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~ 110 (366)
+++++++|||||+|+||++++++|+++| ++|++++|+....+ .+.+. + +. +.+|++|.+.++++++. ++
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~--~~-~~~d~~~~~~~~~~~~~~~~~ 114 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---D--LN-IADYMDKEDFLIQIMAGEEFG 114 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT---T--SC-CSEEEEHHHHHHHHHTTCCCS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc---C--ce-EeeecCcHHHHHHHHhhcccC
Confidence 4678999999999999999999999999 99999999865421 01111 1 22 67899999999998874 35
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|+|||+||.... +.++++..+++|+.++.++++++.+. + . +||++||...+...
T Consensus 115 ~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~---~-r~V~~SS~~v~g~~---------- 170 (357)
T 2x6t_A 115 DVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E---I-PFLYASSAATYGGR---------- 170 (357)
T ss_dssp SCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T---C-CEEEEEEGGGGCSC----------
T ss_pred CCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc----C---C-eEEEEcchHHhCCC----------
Confidence 79999999997543 22346788999999999999998752 2 4 99999998765410
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+... ..+..+..+...|+.+|++.+.+++.++.+ .|++++.|.||.+.++..
T Consensus 171 ------------~~~~------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~ 222 (357)
T 2x6t_A 171 ------------TSDF------IESREYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE 222 (357)
T ss_dssp ------------SSCC------CSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred ------------CCCC------cCCcCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCC
Confidence 0000 011111222338999999999999998876 389999999999987753
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.4e-19 Score=166.35 Aligned_cols=177 Identities=16% Similarity=0.187 Sum_probs=130.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++|||||+|+||++++++|+++|++|++++|......+ .+ ..++.++.+|++|++++++++++. ++|++||+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~----~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~vi~~ 73 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV----PKGVPFFRVDLRDKEGVERAFREF-RPTHVSHQ 73 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS----CTTCCEECCCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc----ccCeEEEECCCCCHHHHHHHHHhc-CCCEEEEC
Confidence 69999999999999999999999999999985432110 01 135667899999999999998865 68999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
|+.... ..+.++++..+++|+.++.++++++.+ .+ .++||++||..+........ ..
T Consensus 74 a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~---~~~iv~~SS~~~~~g~~~~~-------~~----- 130 (311)
T 2p5y_A 74 AAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG---VEKLVFASTGGAIYGEVPEG-------ER----- 130 (311)
T ss_dssp CSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT---CSEEEEEEEHHHHHCCCCTT-------CC-----
T ss_pred ccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC---CCEEEEeCCChhhcCCCCCC-------CC-----
Confidence 996432 124566788999999999999998852 22 46999999973322100000 00
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
..+..+..+...|++||++++.+++.++.++ |++++++.||.+.+|..
T Consensus 131 --------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~ 178 (311)
T 2p5y_A 131 --------------AEETWPPRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQ 178 (311)
T ss_dssp --------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred --------------cCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCC
Confidence 0000111122389999999999999999875 89999999999988753
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-19 Score=169.49 Aligned_cols=192 Identities=17% Similarity=0.137 Sum_probs=126.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHH--HHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAK--QSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~--~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
+|++|||||+|+||++++++|+++|++|+++.|+.++.++.. ..+. ...++.++.+|++|.++++++++ .+|+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~---~~D~ 83 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ--ELGDLKIFRADLTDELSFEAPIA---GCDF 83 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG--GGSCEEEEECCTTTSSSSHHHHT---TCSE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC--CCCcEEEEecCCCChHHHHHHHc---CCCE
Confidence 789999999999999999999999999999999865432111 1222 13468889999999999988887 6899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|||+|+.... . ..+..++.+++|+.++.++++++.+.. + .++||++||..+.............++..
T Consensus 84 Vih~A~~~~~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~---v~r~V~~SS~~~~~~~~~~~~~~~~~E~~- 151 (338)
T 2rh8_A 84 VFHVATPVHF---A--SEDPENDMIKPAIQGVVNVMKACTRAK---S---VKRVILTSSAAAVTINQLDGTGLVVDEKN- 151 (338)
T ss_dssp EEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT---T---CCEEEEECCHHHHHHHHHTCSCCCCCTTT-
T ss_pred EEEeCCccCC---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---C---cCEEEEEecHHHeecCCcCCCCcccChhh-
Confidence 9999985421 1 111224589999999999999986532 1 46999999987543211100000000000
Q ss_pred ccccCCCCCCcccccccccccccccc-ccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLL-GTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
. ... .. ..+.. ....|+.||++.+.+++.++.+ +|+++++|.||.+.+|..
T Consensus 152 ~----~~~-~~----------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~ 203 (338)
T 2rh8_A 152 W----TDI-EF----------LTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSL 203 (338)
T ss_dssp T----TCC------------------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCS
T ss_pred c----cch-hh----------ccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCC
Confidence 0 000 00 00000 1115999999888888777654 389999999999998864
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-18 Score=178.56 Aligned_cols=194 Identities=14% Similarity=0.142 Sum_probs=134.9
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
+.+.+++|++|||||+|+||++++++|+++|++|++++|+.....+..+++....+.++.++.+|++|.+++++++++.
T Consensus 5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~- 83 (699)
T 1z45_A 5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY- 83 (699)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-
Confidence 4567889999999999999999999999999999999997654333333333222457788999999999999999876
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|+||||||...... ..+..++.+++|+.++.++++++.. .+ .++||++||.+.+........
T Consensus 84 ~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~---~~~iV~~SS~~vyg~~~~~~~----- 147 (699)
T 1z45_A 84 KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQ----YN---VSKFVFSSSATVYGDATRFPN----- 147 (699)
T ss_dssp CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HT---CCEEEEEEEGGGGCCGGGSTT-----
T ss_pred CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHHH----cC---CCEEEEECcHHHhCCCccccc-----
Confidence 7999999999753221 1233456899999999999877643 22 569999999766531100000
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
..+..+..+..+...|+.||++++.+++.++.+. ..|+++..+.|+.+..+
T Consensus 148 -------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~ 198 (699)
T 1z45_A 148 -------------------MIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA 198 (699)
T ss_dssp -------------------CCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred -------------------cCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence 0000111111223389999999999999998875 45899999988766443
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=170.58 Aligned_cols=224 Identities=12% Similarity=0.050 Sum_probs=146.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch---hHHHHHHHHHhh--------cCCeEEEEEecCCCHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK---KLEEAKQSIQLA--------TGIEVATYSADVRDFD 100 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~---~~~~~~~~l~~~--------~~~~v~~~~~Dls~~~ 100 (366)
..+.+++++|||||+|+||++++++|+++|++|++++|+.. ..+.+.+.+... .+.++.++.+|++|++
T Consensus 64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 143 (427)
T 4f6c_A 64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD 143 (427)
T ss_dssp SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence 34567889999999999999999999999999999999987 333333333221 2457999999999988
Q ss_pred HHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 101 AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 101 ~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
++. ..+++|+||||||... ..++++..+++|+.++.++++++.+ . ..++|++||... . .
T Consensus 144 ~l~----~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~---~-----~~~~v~~SS~~~-G-~ 202 (427)
T 4f6c_A 144 DVV----LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ---H-----HARLIYVSTISV-G-T 202 (427)
T ss_dssp CCC----CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH---T-----TCEEEEEEEGGG-G-S
T ss_pred cCC----CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh---c-----CCcEEEECchHh-C-C
Confidence 888 5678999999999753 2356788999999999999999976 2 469999999876 2 1
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
..... .......+.. . ..+..+...|+.||.+.+.+++.++. .|+++++|.||.|.+
T Consensus 203 ~~~~~---~~~~~~~E~~--~--------------~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G 259 (427)
T 4f6c_A 203 YFDID---TEDVTFSEAD--V--------------YKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTS 259 (427)
T ss_dssp EECSS---CSCCEECTTC--S--------------CSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEES
T ss_pred CccCC---CCCccccccc--c--------------ccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeec
Confidence 11100 0000000000 0 00011233899999999999988764 589999999999987
Q ss_pred CChhhhhh----------------cCCcchh-hhhccCCCCCHHHHHHHHHhhhhC
Q 017757 261 PGLEEENK----------------RRPRLTS-IIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 261 ~~~~~~~~----------------~~~~~~~-~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
+....... ....... .......++..+++++.++..+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~ 315 (427)
T 4f6c_A 260 PYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQV 315 (427)
T ss_dssp CSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTS
T ss_pred CCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcC
Confidence 75432100 0000000 001122366788888888877654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=163.46 Aligned_cols=201 Identities=12% Similarity=0.038 Sum_probs=111.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+|++|||||+|+||++++++|+++|++|++++|+.+. + + ++.+|++|.++++++++.. ++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~-~--~~~~Dl~d~~~~~~~~~~~-~~d~vi 65 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P-K--FEQVNLLDSNAVHHIIHDF-QPHVIV 65 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHH-CCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C-C--eEEecCCCHHHHHHHHHhh-CCCEEE
Confidence 6899999999999999999999999999999987543 1 1 6789999999999998865 689999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
||||..... .+.+++++.+++|+.++.++++++.+. .+++|++||...+... ...
T Consensus 66 h~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~v~~SS~~v~~~~-----~~~-------- 120 (315)
T 2ydy_A 66 HCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAAV--------GAFLIYISSDYVFDGT-----NPP-------- 120 (315)
T ss_dssp ECC-----------------------CHHHHHHHHHHHHH--------TCEEEEEEEGGGSCSS-----SCS--------
T ss_pred ECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEchHHHcCCC-----CCC--------
Confidence 999975432 246678899999999999999999752 2499999998775410 000
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC---CChhhhhh----c
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET---PGLEEENK----R 269 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T---~~~~~~~~----~ 269 (366)
..+..+..+...|+.+|++.+.+++.++.++ ..+|++.|. |...+ .+...... .
T Consensus 121 ----------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~ 181 (315)
T 2ydy_A 121 ----------------YREEDIPAPLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQFS 181 (315)
T ss_dssp ----------------BCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHHCC
T ss_pred ----------------CCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHHHhc
Confidence 0011111222389999999999999886543 246666666 55554 22211110 0
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhh
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGI 297 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i 297 (366)
..............+.++++++.++..+
T Consensus 182 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 209 (315)
T 2ydy_A 182 NKSANMDHWQQRFPTHVKDVATVCRQLA 209 (315)
T ss_dssp SSCEEEECSSBBCCEEHHHHHHHHHHHH
T ss_pred CCCeeeccCceECcEEHHHHHHHHHHHH
Confidence 0000000011224567889988877665
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.8e-19 Score=169.84 Aligned_cols=187 Identities=10% Similarity=0.029 Sum_probs=133.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++++++++||||+|+||++++++|+++| ++|++++|+.....+ .+. ...++.++.+|++|+++++++++ +
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~--~~~~v~~~~~Dl~d~~~l~~~~~---~ 99 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP--DHPAVRFSETSITDDALLASLQD---E 99 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC--CCTTEEEECSCTTCHHHHHHCCS---C
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc--CCCceEEEECCCCCHHHHHHHhh---C
Confidence 35789999999999999999999999999 999999998654211 111 13468899999999999888776 7
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+|||+||..... .+.++++..+++|+.++.++++++. +.. ..++||++||...+..... ...+.
T Consensus 100 ~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~--~~~~~V~~SS~~vyg~~~~----~~~~~ 165 (377)
T 2q1s_A 100 YDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLK----HFK--RLKKVVYSAAGCSIAEKTF----DDAKA 165 (377)
T ss_dssp CSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHT----TCS--SCCEEEEEEEC-----------------
T ss_pred CCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HhC--CCCeEEEeCCHHHcCCCCC----CCcCc
Confidence 99999999965321 2345678899999999999998883 220 1569999999765531100 00000
Q ss_pred cccccccCCCCCCccccccccccccccc-cccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCL-LGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
.+. ... .+. .+...|+.+|++.+.+++.++.++ |++++++.||.+.++..
T Consensus 166 ---~E~-~~~---------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 166 ---TEE-TDI---------------VSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE 216 (377)
T ss_dssp ----CC-CCC---------------CCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred ---ccc-ccc---------------ccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence 000 000 011 122389999999999999998875 89999999999988754
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=7.5e-20 Score=162.08 Aligned_cols=151 Identities=13% Similarity=0.095 Sum_probs=121.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.+++++||||+|+||++++++|+++|+ +|++++|++++ ...++.++.+|++|++++++++ +|
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------~~~~~~~~~~D~~~~~~~~~~~-----~d 67 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------EHPRLDNPVGPLAELLPQLDGS-----ID 67 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------CCTTEECCBSCHHHHGGGCCSC-----CS
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------cCCCceEEeccccCHHHHHHhh-----hc
Confidence 578999999999999999999999998 99999998765 0346788899999887766554 89
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
+||||||.... +.+++++.+++|+.++..+++++.+. + .+++|++||.....
T Consensus 68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~~Ss~~~~~--------------- 119 (215)
T 2a35_A 68 TAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALEM----G---ARHYLVVSALGADA--------------- 119 (215)
T ss_dssp EEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHHT----T---CCEEEEECCTTCCT---------------
T ss_pred EEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHHc----C---CCEEEEECCcccCC---------------
Confidence 99999996431 23457788999999999999887532 2 46999999977643
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcE-EEEEcCCCCCCCCh
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIH-VSLIFPPDTETPGL 263 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~-Vn~V~PG~v~T~~~ 263 (366)
+... .|+.+|++++.+++. .|++ ++.|.||.+.++..
T Consensus 120 ---------~~~~-----------------~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~ 157 (215)
T 2a35_A 120 ---------KSSI-----------------FYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPRE 157 (215)
T ss_dssp ---------TCSS-----------------HHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTS
T ss_pred ---------CCcc-----------------HHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCC
Confidence 1223 799999999988764 3898 99999999998854
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-18 Score=159.79 Aligned_cols=173 Identities=14% Similarity=0.094 Sum_probs=131.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKE--GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
+++++||||+|+||++++++|+++ |++|++++|+....+ . . .++.++.+|++|.+++++++++. ++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~----~----~~~~~~~~D~~d~~~~~~~~~~~-~~d~ 71 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V----V----NSGPFEVVNALDFNQIEHLVEVH-KITD 71 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H----H----HSSCEEECCTTCHHHHHHHHHHT-TCCE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c----c----CCCceEEecCCCHHHHHHHHhhc-CCCE
Confidence 478999999999999999999999 899999999876522 1 1 13567899999999999999866 6899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|||+||..... ..++.+..+++|+.++.++++++.+ .+ .+++|++||...+...... .
T Consensus 72 vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~~~~v~~SS~~~~~~~~~~----~------ 129 (312)
T 2yy7_A 72 IYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKA----KK---IKKIFWPSSIAVFGPTTPK----E------ 129 (312)
T ss_dssp EEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHT----TS---CSEEECCEEGGGCCTTSCS----S------
T ss_pred EEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHH----cC---CCEEEEeccHHHhCCCCCC----C------
Confidence 99999964321 2356788999999999999998853 22 4699999998765411000 0
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
...+..+..+...|+.+|.+.+.+++.++.++ |++++++.||.+.++
T Consensus 130 -----------------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~ 176 (312)
T 2yy7_A 130 -----------------NTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISW 176 (312)
T ss_dssp -----------------SBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECS
T ss_pred -----------------CccccCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecC
Confidence 00011111223389999999999999998775 899999999988774
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-17 Score=156.24 Aligned_cols=168 Identities=13% Similarity=0.080 Sum_probs=126.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+++++||||+|.||++++++|+++|++|++++|++...+ . . ++.++.+|++ .+++.++++ ++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~----~-----~~~~~~~Dl~-~~~~~~~~~---~~d~Vi 67 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I----N-----DYEYRVSDYT-LEDLINQLN---DVDAVV 67 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTT---TCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C----C-----ceEEEEcccc-HHHHHHhhc---CCCEEE
Confidence 478999999999999999999999999999999844322 1 1 6788999999 999998887 799999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
|+|+..... +.+..+++|+.++.++++++.. .+ ..++|++||...+..+.. .
T Consensus 68 h~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~---~~r~v~~SS~~vyg~~~~---------~---- 119 (311)
T 3m2p_A 68 HLAATRGSQ--------GKISEFHDNEILTQNLYDACYE----NN---ISNIVYASTISAYSDETS---------L---- 119 (311)
T ss_dssp ECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHH----TT---CCEEEEEEEGGGCCCGGG---------C----
T ss_pred EccccCCCC--------ChHHHHHHHHHHHHHHHHHHHH----cC---CCEEEEEccHHHhCCCCC---------C----
Confidence 999976543 3455788999999999888843 22 468999999665541100 0
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
+..+..+..+...|+.+|.+.+.+++.++.+ .|++++.+.|+.+.++...
T Consensus 120 ---------------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~ 169 (311)
T 3m2p_A 120 ---------------PWNEKELPLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEK 169 (311)
T ss_dssp ---------------SBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC-
T ss_pred ---------------CCCCCCCCCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCC
Confidence 0111111222338999999999999998875 4899999999999877543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=158.43 Aligned_cols=181 Identities=15% Similarity=0.107 Sum_probs=129.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhcCCCcEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEAGPVDVL 115 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~id~v 115 (366)
+++|||||+|+||++++++|+++ |++|++++|+.++.+... ...++.++.+|++| .+.++++++ ++|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~---~~d~v 71 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVK---KCDVV 71 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHH---HCSEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh------cCCCeEEEeccccCcHHHHHhhcc---CCCEE
Confidence 47999999999999999999998 899999999876543211 13468899999998 467888877 58999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||+||...+.. ..++.+..+++|+.++.++++++.+ . .+++|++||...+..... ..++++...
T Consensus 72 ih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~----~~~~v~~SS~~v~g~~~~----~~~~e~~~~ 135 (345)
T 2bll_A 72 LPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----Y----RKRIIFPSTSEVYGMCSD----KYFDEDHSN 135 (345)
T ss_dssp EECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHH----T----TCEEEEECCGGGGBTCCC----SSBCTTTCC
T ss_pred EEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHHH----h----CCeEEEEecHHHcCCCCC----CCcCCcccc
Confidence 99999754311 2345677999999999999888853 1 259999999766531100 000000000
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
....+.. .+...|+.+|++.+.+++.++.+. |++++++.||.+.++..
T Consensus 136 ~~~~~~~-----------------~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 183 (345)
T 2bll_A 136 LIVGPVN-----------------KPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL 183 (345)
T ss_dssp CBCCCTT-----------------CGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSC
T ss_pred cccCccc-----------------CcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCc
Confidence 0000000 122289999999999999998875 89999999999987753
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-18 Score=178.85 Aligned_cols=185 Identities=15% Similarity=0.119 Sum_probs=132.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHH-HHHHHHhcCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA-VKTALDEAGP 111 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~-v~~~~~~~~~ 111 (366)
.+++++++||||+|+||++++++|+++ |++|++++|+....++. . ...++.++.+|++|.++ ++++++ +
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~--~~~~v~~v~~Dl~d~~~~~~~~~~---~ 382 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L--NHPHFHFVEGDISIHSEWIEYHVK---K 382 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T--TCTTEEEEECCTTTCHHHHHHHHH---H
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c--cCCceEEEECCCCCcHHHHHHhhc---C
Confidence 357899999999999999999999998 89999999987654321 1 13468899999999765 777776 6
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+||||||...+.. ..++.+..+++|+.++.++++++.+. .+++|++||...+..... ..+++
T Consensus 383 ~D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~~--------~~r~V~~SS~~vyg~~~~----~~~~E 446 (660)
T 1z7e_A 383 CDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVKY--------RKRIIFPSTSEVYGMCSD----KYFDE 446 (660)
T ss_dssp CSEEEECCCCCCTHH----HHHSHHHHHHHHTHHHHHHHHHHHHT--------TCEEEEECCGGGGBTCCS----SSBCT
T ss_pred CCEEEECceecCccc----cccCHHHHHHhhhHHHHHHHHHHHHh--------CCEEEEEecHHHcCCCCC----cccCC
Confidence 899999999754321 23456789999999999998888542 259999999766541100 00000
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
........+.. .+...|+.||.+.+.+++.++.+. |++++++.||.+.++..
T Consensus 447 ~~~~~~~~p~~-----------------~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~ 498 (660)
T 1z7e_A 447 DHSNLIVGPVN-----------------KPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL 498 (660)
T ss_dssp TTCCEEECCTT-----------------CTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTS
T ss_pred CccccccCccc-----------------CCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCc
Confidence 00000000000 122379999999999999998775 89999999999988764
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=9.6e-18 Score=155.67 Aligned_cols=157 Identities=13% Similarity=0.086 Sum_probs=116.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
-..+++|||||+|+||++++++|+++|++|++++|+ .+|++|.+++++++++. ++|+
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~-~~d~ 66 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEK-KPNV 66 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHH-CCSE
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhc-CCCE
Confidence 356899999999999999999999999999999996 27999999999998865 6899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
||||||.... +.+.+++++.+++|+.++.++++++.+. + . +||++||.+.+...
T Consensus 67 vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~---~-~iv~~SS~~v~~~~-------------- 120 (292)
T 1vl0_A 67 VINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV----G---A-EIVQISTDYVFDGE-------------- 120 (292)
T ss_dssp EEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T---C-EEEEEEEGGGSCSC--------------
T ss_pred EEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C---C-eEEEechHHeECCC--------------
Confidence 9999996432 1245678899999999999999998652 2 3 99999998765411
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
+... ..+..+..+...|+.+|++.+.+++.++. ++..|.|+.+.++
T Consensus 121 --------~~~~------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~ 166 (292)
T 1vl0_A 121 --------AKEP------ITEFDEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD 166 (292)
T ss_dssp --------CSSC------BCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS
T ss_pred --------CCCC------CCCCCCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC
Confidence 0000 00111111223899999999999888754 2556666666544
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=165.58 Aligned_cols=192 Identities=13% Similarity=0.082 Sum_probs=133.9
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHC---CCeEEEEecCchhHHHHHHHHHh---------------hcCCeEEEE
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKE---GARVSILARSGKKLEEAKQSIQL---------------ATGIEVATY 92 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~---G~~V~l~~r~~~~~~~~~~~l~~---------------~~~~~v~~~ 92 (366)
+....++|+|+||||+|+||++++++|+++ |++|++++|+.+..+. .+.+.. ....++.++
T Consensus 67 ~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v 145 (478)
T 4dqv_A 67 PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVV 145 (478)
T ss_dssp CCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEE
T ss_pred CCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEE
Confidence 345678999999999999999999999999 9999999998765432 222221 123589999
Q ss_pred EecCC------CHHHHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 017757 93 SADVR------DFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPA 166 (366)
Q Consensus 93 ~~Dls------~~~~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g 166 (366)
.+|++ +.++++++++ ++|+||||||.... +.++..+++|+.++.++++++.+ .+ .+
T Consensus 146 ~~Dl~~~~~gld~~~~~~~~~---~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~---~~ 207 (478)
T 4dqv_A 146 AGDKSEPDLGLDQPMWRRLAE---TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT----TK---LK 207 (478)
T ss_dssp ECCTTSGGGGCCHHHHHHHHH---HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS----SS---CC
T ss_pred EeECCCcccCCCHHHHHHHHc---CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh----CC---CC
Confidence 99998 7778888887 68999999997643 22345789999999999988742 22 46
Q ss_pred EEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccC
Q 017757 167 SIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD 246 (366)
Q Consensus 167 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~ 246 (366)
++|++||.+.+... . ...+++..... ... . ...........|+.||.+.+.+++.++.+.
T Consensus 208 ~~V~iSS~~v~~~~-~---~~~~~E~~~~~-------p~~-----~-~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--- 267 (478)
T 4dqv_A 208 PFTYVSTADVGAAI-E---PSAFTEDADIR-------VIS-----P-TRTVDGGWAGGYGTSKWAGEVLLREANDLC--- 267 (478)
T ss_dssp CEEEEEEGGGGTTS-C---TTTCCSSSCHH-------HHC-----C-EEECCTTSEECHHHHHHHHHHHHHHHHHHH---
T ss_pred eEEEEeehhhcCcc-C---CCCcCCccccc-------ccC-----c-ccccccccccchHHHHHHHHHHHHHHHHHh---
Confidence 89999997654310 0 00011000000 000 0 000000112369999999999999998865
Q ss_pred CcEEEEEcCCCCCCC
Q 017757 247 DIHVSLIFPPDTETP 261 (366)
Q Consensus 247 gI~Vn~V~PG~v~T~ 261 (366)
|+++++|.||.|.++
T Consensus 268 gi~~~ivRpg~v~G~ 282 (478)
T 4dqv_A 268 ALPVAVFRCGMILAD 282 (478)
T ss_dssp CCCEEEEEECEEECC
T ss_pred CCCeEEEECceeeCC
Confidence 899999999999765
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.3e-17 Score=153.02 Aligned_cols=172 Identities=13% Similarity=0.083 Sum_probs=126.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCCcEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPVDVL 115 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~id~v 115 (366)
++|||||+|+||++++++|+++| ++|++++|+..... ...+. +.. +.+|++|.+.++++++. .+++|+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~~~---~~~d~~~~~~~~~~~~~~~~~~~d~v 72 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---DLN---IADYMDKEDFLIQIMAGEEFGDVEAI 72 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH---TSC---CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC---cce---eccccccHHHHHHHHhccccCCCcEE
Confidence 48999999999999999999999 89999999765421 11111 122 67899999999998874 2369999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||+||.... +.++++..+++|+.++.++++++.+. + . ++|++||...+...
T Consensus 73 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~---~-~~v~~SS~~v~g~~--------------- 123 (310)
T 1eq2_A 73 FHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E---I-PFLYASSAATYGGR--------------- 123 (310)
T ss_dssp EECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T---C-CEEEEEEGGGGTTC---------------
T ss_pred EECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc----C---C-eEEEEeeHHHhCCC---------------
Confidence 999997543 22345778999999999999988643 2 4 99999998655310
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+... ..+..+..+...|+.+|.+.+.+++.++.+ .|++++.+.||.+.++..
T Consensus 124 -------~~~~------~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~ 175 (310)
T 1eq2_A 124 -------TSDF------IESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE 175 (310)
T ss_dssp -------CSCB------CSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred -------CCCC------CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCC
Confidence 0000 011111222338999999999999998876 489999999999988764
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-17 Score=154.17 Aligned_cols=166 Identities=15% Similarity=0.196 Sum_probs=124.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKE--GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
++|||||+|+||++++++|+++ |++|++++|+....+ .+.++.+|++|.+++++++++. ++|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------~~~~~~~D~~d~~~~~~~~~~~-~~d~vi 67 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------GIKFITLDVSNRDEIDRAVEKY-SIDAIF 67 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------TCCEEECCTTCHHHHHHHHHHT-TCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------CceEEEecCCCHHHHHHHHhhc-CCcEEE
Confidence 4899999999999999999999 899999999765421 3457899999999999999865 699999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
|+||.... ...++.+..+++|+.++.++++++.+ .+ .+++|++||...+....... .
T Consensus 68 h~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~---~~~~v~~SS~~~~~~~~~~~---~-------- 124 (317)
T 3ajr_A 68 HLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQ----HR---VEKVVIPSTIGVFGPETPKN---K-------- 124 (317)
T ss_dssp ECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT---CCEEEEEEEGGGCCTTSCSS---S--------
T ss_pred ECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHH----cC---CCEEEEecCHHHhCCCCCCC---C--------
Confidence 99996432 12356778999999999999998854 22 46999999987764110000 0
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
..+..+..+...|+.||++.+.+++.++.++ |++++++.|+.+.
T Consensus 125 ----------------~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~ 168 (317)
T 3ajr_A 125 ----------------VPSITITRPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGII 168 (317)
T ss_dssp ----------------BCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEE
T ss_pred ----------------ccccccCCCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEe
Confidence 0001111223389999999999999888764 8999999765443
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.3e-17 Score=151.33 Aligned_cols=196 Identities=17% Similarity=0.077 Sum_probs=131.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||+|+||++++++|+ +|++|++++|+.+. + . + +.+|++|+++++++++.. ++|+||||
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~-~-----~~~Dl~~~~~~~~~~~~~-~~d~vi~~ 64 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------G-G-----YKLDLTDFPRLEDFIIKK-RPDVIINA 64 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------T-C-----EECCTTSHHHHHHHHHHH-CCSEEEEC
T ss_pred EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------C-C-----ceeccCCHHHHHHHHHhc-CCCEEEEC
Confidence 58999999999999999999 58999999998742 1 1 2 789999999999999865 69999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||.... +.+.+++++.+++|+.++.++++++.+ . .++||++||...+..... .
T Consensus 65 a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~----~~~iv~~SS~~~~~~~~~-----~---------- 117 (273)
T 2ggs_A 65 AAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----I----DSYIVHISTDYVFDGEKG-----N---------- 117 (273)
T ss_dssp CCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T----TCEEEEEEEGGGSCSSSC-----S----------
T ss_pred CcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h----CCeEEEEecceeEcCCCC-----C----------
Confidence 997542 124567889999999999999999853 2 349999999887641100 0
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc--CCcchhh
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR--RPRLTSI 276 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~--~~~~~~~ 276 (366)
..+..+..+...|+.+|++++.+++. +....+|++.|. | .+++....... .......
T Consensus 118 --------------~~e~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~~ 176 (273)
T 2ggs_A 118 --------------YKEEDIPNPINYYGLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVFA 176 (273)
T ss_dssp --------------BCTTSCCCCSSHHHHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEEE
T ss_pred --------------cCCCCCCCCCCHHHHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCCEEe
Confidence 00111111223899999999999887 222345665555 4 34433221100 0000000
Q ss_pred hhccCCCCCHHHHHHHHHhhhhC
Q 017757 277 IAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 277 ~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
.......+.++++++.++..+..
T Consensus 177 ~~~~~~~~~~~dva~~i~~~~~~ 199 (273)
T 2ggs_A 177 FKGYYSPISARKLASAILELLEL 199 (273)
T ss_dssp ESCEECCCBHHHHHHHHHHHHHH
T ss_pred ecCCCCceEHHHHHHHHHHHHhc
Confidence 00022456788888887777644
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.4e-17 Score=156.70 Aligned_cols=182 Identities=14% Similarity=0.065 Sum_probs=124.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
..++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+. ...++.++.+|+++.. +.++
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~--------~~~~ 92 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL--------YIEV 92 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC--------CCCC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh--------hcCC
Confidence 34678999999999999999999999999999999997542211111111 1346888999998852 4579
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|||+||....... .++.+..+++|+.++.++++++.+. ..++|++||...+.... ....++
T Consensus 93 d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~v~~SS~~v~g~~~----~~~~~E- 155 (343)
T 2b69_A 93 DQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV--------GARLLLASTSEVYGDPE----VHPQSE- 155 (343)
T ss_dssp SEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH--------TCEEEEEEEGGGGBSCS----SSSBCT-
T ss_pred CEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh--------CCcEEEECcHHHhCCCC----CCCCcc-
Confidence 999999996532211 1234678999999999999988642 24899999976553110 000000
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
.... ...+..+...|+.||++.+.+++.++.+. |++++++.||.+.++.
T Consensus 156 ~~~~------------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~ 204 (343)
T 2b69_A 156 DYWG------------------HVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPR 204 (343)
T ss_dssp TCCC------------------BCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred cccc------------------cCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcC
Confidence 0000 00111222389999999999999998765 8999999999998875
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-17 Score=153.44 Aligned_cols=192 Identities=13% Similarity=0.074 Sum_probs=132.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++|||||+|+||++++++|+++|++|++++|. ++|++|.+++++++++. ++|+|||+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~-~~d~vi~~ 63 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEI-RPHIIIHC 63 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhc-CCCEEEEC
Confidence 89999999999999999999999999999992 37999999999999876 68999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||..... ...++++..+++|+.++.++++++.+. ..++|++||...+..+
T Consensus 64 a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~v~~SS~~vy~~~------------------ 113 (287)
T 3sc6_A 64 AAYTKVD----QAEKERDLAYVINAIGARNVAVASQLV--------GAKLVYISTDYVFQGD------------------ 113 (287)
T ss_dssp CCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHHH--------TCEEEEEEEGGGSCCC------------------
T ss_pred CcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEchhhhcCCC------------------
Confidence 9976421 122457789999999999999998543 2489999998765411
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh----hhc---CC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE----NKR---RP 271 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~----~~~---~~ 271 (366)
... +..+..+..+...|+.+|.+.+.+++.++. +++.+.|+.+.++..... ... ..
T Consensus 114 ----~~~------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~ 176 (287)
T 3sc6_A 114 ----RPE------GYDEFHNPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKERE 176 (287)
T ss_dssp ----CSS------CBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCS
T ss_pred ----CCC------CCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCC
Confidence 000 011111222333899999999998887654 357888988876642211 100 00
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
.....-......+.++++++.+...+..+
T Consensus 177 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 205 (287)
T 3sc6_A 177 EISVVADQIGSPTYVADLNVMINKLIHTS 205 (287)
T ss_dssp EEEEECSCEECCEEHHHHHHHHHHHHTSC
T ss_pred CeEeecCcccCceEHHHHHHHHHHHHhCC
Confidence 00000001123456888888888777654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-17 Score=151.61 Aligned_cols=176 Identities=14% Similarity=0.120 Sum_probs=123.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.+++++++|||||+|+||++++++|+++|+ +.... ...+..+.+|++|.++++++++.. ++
T Consensus 2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~-~~ 62 (319)
T 4b8w_A 2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------------WVFVSSKDADLTDTAQTRALFEKV-QP 62 (319)
T ss_dssp CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------------EEECCTTTCCTTSHHHHHHHHHHS-CC
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------------ccccCceecccCCHHHHHHHHhhc-CC
Confidence 457889999999999999999999999997 11100 113334578999999999999875 59
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|||+|+..... ..+.++.+..+++|+.++.++++++... + ..++|++||...+.... ...+++.
T Consensus 63 d~Vih~A~~~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~---~~~~v~~SS~~vyg~~~----~~~~~E~ 128 (319)
T 4b8w_A 63 THVIHLAAMVGGL---FRNIKYNLDFWRKNVHMNDNVLHSAFEV----G---ARKVVSCLSTCIFPDKT----TYPIDET 128 (319)
T ss_dssp SEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T---CSEEEEECCGGGSCSSC----CSSBCGG
T ss_pred CEEEECceecccc---cccccCHHHHHHHHHHHHHHHHHHHHHc----C---CCeEEEEcchhhcCCCC----CCCcccc
Confidence 9999999974321 1122345678999999999999887432 2 46999999986653100 0000000
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
... ..+.. +....|+.||.+.+.+++.++.+. |++++.+.|+.+.++..
T Consensus 129 ~~~--~~~~~-----------------p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~ 177 (319)
T 4b8w_A 129 MIH--NGPPH-----------------NSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHD 177 (319)
T ss_dssp GGG--BSCCC-----------------SSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred ccc--cCCCC-----------------CCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCC
Confidence 000 00111 122269999999999999998875 79999999999877753
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=7.3e-17 Score=151.60 Aligned_cols=170 Identities=16% Similarity=0.134 Sum_probs=125.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++++++||||+|+||++++++|+++|++|++++|+. .+|++|.+++++++++. ++|+|
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~-~~d~v 59 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE-RIDQV 59 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH-CCSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhc-CCCEE
Confidence 467899999999999999999999999999988763 26999999999998865 58999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||+||..... ....++.+..+++|+.++.++++++.+ .+ .+++|++||...+.... ....++....
T Consensus 60 ih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~~~~v~~SS~~vyg~~~----~~~~~E~~~~ 125 (321)
T 1e6u_A 60 YLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQ----ND---VNKLLFLGSSCIYPKLA----KQPMAESELL 125 (321)
T ss_dssp EECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TT---CCEEEEECCGGGSCTTC----CSSBCGGGTT
T ss_pred EEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHHH----hC---CCeEEEEccHHHcCCCC----CCCcCccccc
Confidence 9999965321 113445678899999999999998854 22 46999999987654110 0000000000
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
..+..|. ...|+.+|.+.+.+++.++.++ |++++++.||.+.++..
T Consensus 126 --~~~~~p~-----------------~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 171 (321)
T 1e6u_A 126 --QGTLEPT-----------------NEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD 171 (321)
T ss_dssp --SSCCCGG-----------------GHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred --cCCCCCC-----------------CCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCC
Confidence 0001111 2389999999999999998765 89999999999887653
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3.8e-17 Score=152.04 Aligned_cols=157 Identities=15% Similarity=0.047 Sum_probs=117.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++||||+|+||++++++|+ +|++|++++|+.. .+.+|++|.++++++++.. ++|+|||+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~-~~d~vih~ 61 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKL-RPDVIVNA 61 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccCCCHHHHHHHHHhc-CCCEEEEC
Confidence 69999999999999999999 8999999999762 2578999999999998865 58999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||..... .+.++++..+++|+.++.++++++.+ . ..++|++||...+...
T Consensus 62 a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~----~~~~v~~SS~~vy~~~------------------ 111 (299)
T 1n2s_A 62 AAHTAVD----KAESEPELAQLLNATSVEAIAKAANE----T----GAWVVHYSTDYVFPGT------------------ 111 (299)
T ss_dssp CCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTT----T----TCEEEEEEEGGGSCCC------------------
T ss_pred cccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHH----c----CCcEEEEecccEEeCC------------------
Confidence 9965321 12235677899999999999998832 2 2389999998765411
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.. ...+..+..+...|+.+|.+.+.+++.++. +++.+.||.+.++.
T Consensus 112 ----~~~------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~ 158 (299)
T 1n2s_A 112 ----GDI------PWQETDATSPLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGK 158 (299)
T ss_dssp ----TTC------CBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSS
T ss_pred ----CCC------CCCCCCCCCCccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCC
Confidence 000 001111112233899999999988877643 78899999998874
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.67 E-value=4.6e-16 Score=143.77 Aligned_cols=182 Identities=13% Similarity=0.105 Sum_probs=130.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKE--GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
|+++||||+|+||++++++|+++ |++|++++|+.++.+... ...+.++.+|++|+++++++++ .+|+|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~d~~~l~~~~~---~~d~v 70 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-------DQGVEVRHGDYNQPESLQKAFA---GVSKL 70 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-------HTTCEEEECCTTCHHHHHHHTT---TCSEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-------hcCCeEEEeccCCHHHHHHHHh---cCCEE
Confidence 46999999999999999999999 999999999887654332 1256788999999999998887 68999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||+||... . + ++|+.++.++++++. +.+ .++||++||.....
T Consensus 71 i~~a~~~~-------~-~------~~n~~~~~~l~~a~~----~~~---~~~~v~~Ss~~~~~----------------- 112 (287)
T 2jl1_A 71 LFISGPHY-------D-N------TLLIVQHANVVKAAR----DAG---VKHIAYTGYAFAEE----------------- 112 (287)
T ss_dssp EECCCCCS-------C-H------HHHHHHHHHHHHHHH----HTT---CSEEEEEEETTGGG-----------------
T ss_pred EEcCCCCc-------C-c------hHHHHHHHHHHHHHH----HcC---CCEEEEECCCCCCC-----------------
Confidence 99999521 1 1 578888888888774 322 46999999976421
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh----hhhcCC
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE----ENKRRP 271 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~----~~~~~~ 271 (366)
... .|+.+|.+.+.+.+. .|++++.+.||.+.++.... ......
T Consensus 113 --------~~~-----------------~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~ 160 (287)
T 2jl1_A 113 --------SII-----------------PLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESGA 160 (287)
T ss_dssp --------CCS-----------------THHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHTE
T ss_pred --------CCC-----------------chHHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHHHhhCCc
Confidence 012 799999999888753 58999999999886543111 110000
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
.....-......+.++++++.+...+..
T Consensus 161 ~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 188 (287)
T 2jl1_A 161 IVTNAGSGIVNSVTRNELALAAATVLTE 188 (287)
T ss_dssp EEESCTTCCBCCBCHHHHHHHHHHHHTS
T ss_pred eeccCCCCccCccCHHHHHHHHHHHhcC
Confidence 0000001123467899999998887754
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.2e-17 Score=149.90 Aligned_cols=197 Identities=16% Similarity=0.069 Sum_probs=133.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
|+++++|||| +|+||++++++|+++|++|++++|+.+++ ..++.++.+|++|.++++++++ +++|+
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~~d~ 66 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVH--LRPEI 66 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGG--GCCSE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhc--CCCCE
Confidence 3567899999 59999999999999999999999987652 2467789999999999888777 35999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|||+||.. .++.+..+++|+.++.++++++. +.+ .+++|++||...+...
T Consensus 67 vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~---~~~~v~~SS~~vyg~~-------------- 116 (286)
T 3gpi_A 67 LVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAP---LQHVFFVSSTGVYGQE-------------- 116 (286)
T ss_dssp EEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSC---CCEEEEEEEGGGCCCC--------------
T ss_pred EEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCC---CCEEEEEcccEEEcCC--------------
Confidence 99999852 24456788999999999988874 222 5799999998665410
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcch
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~ 274 (366)
+.. .+.+..+..+...|+.+|.+.+.+ +.. ++++.+.|+.+.++........... .
T Consensus 117 --------~~~------~~~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~-~ 172 (286)
T 3gpi_A 117 --------VEE------WLDEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQT-P 172 (286)
T ss_dssp --------CSS------EECTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTC-G
T ss_pred --------CCC------CCCCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHh-c
Confidence 000 011111222333899999988776 432 7899999999987765432221111 1
Q ss_pred hhh---hccCCCCCHHHHHHHHHhhhhC
Q 017757 275 SII---AASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 275 ~~~---~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
... ......+..+++++.+...+..
T Consensus 173 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~ 200 (286)
T 3gpi_A 173 EQWPARNAWTNRIHRDDGAAFIAYLIQQ 200 (286)
T ss_dssp GGSCSSBCEECEEEHHHHHHHHHHHHHH
T ss_pred ccCCCcCceeEEEEHHHHHHHHHHHHhh
Confidence 110 0112345788999988777654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.7e-16 Score=153.98 Aligned_cols=184 Identities=14% Similarity=0.095 Sum_probs=127.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH---HHHHHHHHh--------hcCCeEEEEEecCCCHHHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL---EEAKQSIQL--------ATGIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~---~~~~~~l~~--------~~~~~v~~~~~Dls~~~~v~~ 104 (366)
..+++|||||+|+||++++++|.++|++|++++|+.... +.+.+.+.. ....++.++.+|+++++++.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 357999999999999999999999999999999988732 222222221 22568999999999988777
Q ss_pred HHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 105 ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 105 ~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
...++|+|||||+... ...+++..+++|+.++.++++++.+ + ..++|++||... . .....
T Consensus 228 ---~~~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~---~~~~v~iSS~~v-G-~~~~~ 287 (508)
T 4f6l_B 228 ---LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H---HARLIYVSTISV-G-TYFDI 287 (508)
T ss_dssp ---CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----T---TCEEEEEEESCT-T-SEECT
T ss_pred ---CccCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----C---CCcEEEeCChhh-c-cCCcc
Confidence 4568999999999753 2234577889999999999998864 1 469999999876 2 11100
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
. ..+....+.. +.. +..+...|+.||.+.+.+++.++. .|++++.+.||.|.++..
T Consensus 288 ~---~~~~~~~E~~-~~~---------------~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~ 343 (508)
T 4f6l_B 288 D---TEDVTFSEAD-VYK---------------GQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYN 343 (508)
T ss_dssp T---CSCCEECTTC-SCS---------------SBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSS
T ss_pred C---CcCccccccc-ccc---------------cccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCC
Confidence 0 0000000000 000 011233899999999988887654 599999999999977754
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-16 Score=149.91 Aligned_cols=211 Identities=16% Similarity=0.060 Sum_probs=131.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+++++++|||||+|+||++++++|+++|++|++++|+........+.+... ...++.++.+|++ ++
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------~~ 70 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-------------DV 70 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-------------TE
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-------------cC
Confidence 467899999999999999999999999999999999765100000001100 0123445556655 69
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|||+||........ ++....++ |+.++.++++++.+. + ..++|++||...+...
T Consensus 71 d~vi~~a~~~~~~~~~----~~~~~~~~-n~~~~~~ll~a~~~~----~---v~~~v~~SS~~v~~~~------------ 126 (321)
T 3vps_A 71 RLVYHLASHKSVPRSF----KQPLDYLD-NVDSGRHLLALCTSV----G---VPKVVVGSTCEVYGQA------------ 126 (321)
T ss_dssp EEEEECCCCCCHHHHT----TSTTTTHH-HHHHHHHHHHHHHHH----T---CCEEEEEEEGGGGCSC------------
T ss_pred CEEEECCccCChHHHH----hCHHHHHH-HHHHHHHHHHHHHHc----C---CCeEEEecCHHHhCCC------------
Confidence 9999999976431111 11223456 999999998888543 2 4699999998765411
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCc-EEEEEcCCCCCCCChhh------
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDI-HVSLIFPPDTETPGLEE------ 265 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI-~Vn~V~PG~v~T~~~~~------ 265 (366)
+.. ...+..+..+...|+.+|.+.+.+++.++.+ .|+ +++.+.|+.+.++....
T Consensus 127 ----------~~~------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~ 187 (321)
T 3vps_A 127 ----------DTL------PTPEDSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPR 187 (321)
T ss_dssp ----------SSS------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHH
T ss_pred ----------CCC------CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHH
Confidence 000 0111112223338999999999999998876 488 99999999988775331
Q ss_pred hhhc---CCcchhh--hhccCCCCCHHHHHHHHHhhhhCC
Q 017757 266 ENKR---RPRLTSI--IAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 266 ~~~~---~~~~~~~--~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
.... ....... -......+.++++++.+...+..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 227 (321)
T 3vps_A 188 LCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP 227 (321)
T ss_dssp HHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSC
T ss_pred HHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcC
Confidence 0000 0000000 000112457888888888877554
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.1e-15 Score=137.22 Aligned_cols=179 Identities=16% Similarity=0.088 Sum_probs=122.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKE--GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+++||||+|+||++++++|+++ |++|++++|++++.+.... ..+.++.+|++|+++++++++ .+|+||
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~---~~d~vi 70 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-------QGITVRQADYGDEAALTSALQ---GVEKLL 70 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-------TTCEEEECCTTCHHHHHHHTT---TCSEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-------CCCeEEEcCCCCHHHHHHHHh---CCCEEE
Confidence 4899999999999999999999 9999999998776543321 256788999999999998887 689999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
|+||... +.|+.++.++++++ ++.+ .++||++||.....
T Consensus 71 ~~a~~~~----------------~~~~~~~~~l~~a~----~~~~---~~~~v~~Ss~~~~~------------------ 109 (286)
T 2zcu_A 71 LISSSEV----------------GQRAPQHRNVINAA----KAAG---VKFIAYTSLLHADT------------------ 109 (286)
T ss_dssp ECC------------------------CHHHHHHHHH----HHHT---CCEEEEEEETTTTT------------------
T ss_pred EeCCCCc----------------hHHHHHHHHHHHHH----HHcC---CCEEEEECCCCCCC------------------
Confidence 9998521 12555666555555 4433 56999999976531
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh---hhhcCCcc
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE---ENKRRPRL 273 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~---~~~~~~~~ 273 (366)
... .|+.+|.+.+.+++. .|++++.+.||.+.++.... ........
T Consensus 110 -------~~~-----------------~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~ 158 (286)
T 2zcu_A 110 -------SPL-----------------GLADEHIETEKMLAD-------SGIVYTLLRNGWYSENYLASAPAALEHGVFI 158 (286)
T ss_dssp -------CCS-----------------TTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTTHHHHHHHTEEE
T ss_pred -------Ccc-----------------hhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHHhHHhhcCCcee
Confidence 012 799999999988763 48999999999876653211 10001000
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
..........+.++++++.+...+..
T Consensus 159 ~~~~~~~~~~i~~~Dva~~~~~~~~~ 184 (286)
T 2zcu_A 159 GAAGDGKIASATRADYAAAAARVISE 184 (286)
T ss_dssp ESCTTCCBCCBCHHHHHHHHHHHHHS
T ss_pred ccCCCCccccccHHHHHHHHHHHhcC
Confidence 00001123467899999988877754
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=139.55 Aligned_cols=151 Identities=15% Similarity=0.145 Sum_probs=110.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEec-CCCHHHHHHHHHhcCCCc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD-VRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D-ls~~~~v~~~~~~~~~id 113 (366)
+++++++||||+|+||++++++|+++|++|++++|+.++.. .+.+.. ...+..+.+| ++|++++.++++ .+|
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~--~~~v~~v~~D~l~d~~~l~~~~~---~~d 75 (352)
T 1xgk_A 3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA--IPNVTLFQGPLLNNVPLMDTLFE---GAH 75 (352)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT--STTEEEEESCCTTCHHHHHHHHT---TCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh--cCCcEEEECCccCCHHHHHHHHh---cCC
Confidence 45788999999999999999999999999999999887642 122221 2357889999 999999999887 689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc-ccccccccCccCcccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG-QCWTIKNTNMKGINEN 192 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~-~~~~~~~~~~~~~~~~ 192 (366)
+||||++.... +.|..+ .+++ +.+++.++ .++||++||... ..
T Consensus 76 ~Vi~~a~~~~~---------------~~~~~~-~~l~----~aa~~~g~--v~~~V~~SS~~~~~~-------------- 119 (352)
T 1xgk_A 76 LAFINTTSQAG---------------DEIAIG-KDLA----DAAKRAGT--IQHYIYSSMPDHSLY-------------- 119 (352)
T ss_dssp EEEECCCSTTS---------------CHHHHH-HHHH----HHHHHHSC--CSEEEEEECCCGGGT--------------
T ss_pred EEEEcCCCCCc---------------HHHHHH-HHHH----HHHHHcCC--ccEEEEeCCcccccc--------------
Confidence 99999975321 224443 4444 44444321 359999999762 21
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.+... .|+.||++.+.+++.+ |+++++|.||.+.+
T Consensus 120 --------~~~~~~-----------------~y~~sK~~~E~~~~~~-------gi~~~ivrpg~~g~ 155 (352)
T 1xgk_A 120 --------GPWPAV-----------------PMWAPKFTVENYVRQL-------GLPSTFVYAGIYNN 155 (352)
T ss_dssp --------SSCCCC-----------------TTTHHHHHHHHHHHTS-------SSCEEEEEECEEGG
T ss_pred --------CCCCCc-----------------cHHHHHHHHHHHHHHc-------CCCEEEEecceecC
Confidence 112223 7999999999888652 89999999987643
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.59 E-value=8.5e-15 Score=136.34 Aligned_cols=157 Identities=11% Similarity=0.079 Sum_probs=112.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|+++||||+|+||++++++|+++| ++|++++|++++... +.+.. ..+.++.+|++|+++++++++ .+|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~---~~~~~~~~D~~d~~~l~~~~~---~~d~v 76 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL---QGAEVVQGDQDDQVIMELALN---GAYAT 76 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH---TTCEEEECCTTCHHHHHHHHT---TCSEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH---CCCEEEEecCCCHHHHHHHHh---cCCEE
Confidence 5899999999999999999999999 999999999776431 22222 257788999999999999887 68999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
|||+|..... ..+.|+.+.. .+++.+++.+ .++||++|+...... .
T Consensus 77 i~~a~~~~~~------------~~~~~~~~~~----~~~~aa~~~g---v~~iv~~S~~~~~~~---~------------ 122 (299)
T 2wm3_A 77 FIVTNYWESC------------SQEQEVKQGK----LLADLARRLG---LHYVVYSGLENIKKL---T------------ 122 (299)
T ss_dssp EECCCHHHHT------------CHHHHHHHHH----HHHHHHHHHT---CSEEEECCCCCHHHH---T------------
T ss_pred EEeCCCCccc------------cchHHHHHHH----HHHHHHHHcC---CCEEEEEcCcccccc---C------------
Confidence 9999842110 1234444444 4445555544 579999666432210 0
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
...... .|..+|++++.+.+. .|++++.|.||.+.++...
T Consensus 123 -----~~~~~~-----------------~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~ 162 (299)
T 2wm3_A 123 -----AGRLAA-----------------AHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLS 162 (299)
T ss_dssp -----TTSCCC-----------------HHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGT
T ss_pred -----CCcccC-----------------chhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchh
Confidence 001123 799999999988764 3899999999999887543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-14 Score=132.76 Aligned_cols=191 Identities=13% Similarity=0.017 Sum_probs=124.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
++++|||| |.||++++++|+++|++|++++|+..+.+.... ..+.++.+|++|.+ +.++|+|||
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~--------~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS--------LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC--------CTTCCEEEE
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc--------cCCCCEEEE
Confidence 68999998 999999999999999999999999877654322 36889999999933 568999999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+|+..... .+ ..+.+++.+++... +..++|++||...+..+
T Consensus 70 ~a~~~~~~-----~~----------------~~~~l~~a~~~~~~-~~~~~v~~Ss~~vyg~~----------------- 110 (286)
T 3ius_A 70 STAPDSGG-----DP----------------VLAALGDQIAARAA-QFRWVGYLSTTAVYGDH----------------- 110 (286)
T ss_dssp CCCCBTTB-----CH----------------HHHHHHHHHHHTGG-GCSEEEEEEEGGGGCCC-----------------
T ss_pred CCCccccc-----cH----------------HHHHHHHHHHhhcC-CceEEEEeecceecCCC-----------------
Confidence 99965432 11 12344455554210 15799999997655310
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhh
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSII 277 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~ 277 (366)
... ...+..+..+...|+.+|.+.+.+++.+ .|++++.+.|+.+.++................
T Consensus 111 -----~~~------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~ 173 (286)
T 3ius_A 111 -----DGA------WVDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRI 173 (286)
T ss_dssp -----TTC------EECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEE
T ss_pred -----CCC------CcCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCcccc
Confidence 000 0111112222338999999988887776 58999999999997775322111100000000
Q ss_pred ---hccCCCCCHHHHHHHHHhhhhCC
Q 017757 278 ---AASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 278 ---~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
......+..+++++.+...+...
T Consensus 174 ~~~~~~~~~i~v~Dva~a~~~~~~~~ 199 (286)
T 3ius_A 174 IKPGQVFSRIHVEDIAQVLAASMARP 199 (286)
T ss_dssp ECTTCCBCEEEHHHHHHHHHHHHHSC
T ss_pred CCCCcccceEEHHHHHHHHHHHHhCC
Confidence 01123456789999888887654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.6e-14 Score=137.43 Aligned_cols=196 Identities=15% Similarity=0.140 Sum_probs=127.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
|+.++++||||+|+||++++++|+++|++|++++|+.....+..+.+.......+.++.+|++|.+++.+++++. ++|+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-~~d~ 86 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-EIDI 86 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-TCCE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-CCCE
Confidence 457799999999999999999999999999999998722111112222222347889999999999999999876 6999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|||+||. .|+.+..++++++... + ...++++ |..+.. ..
T Consensus 87 Vi~~a~~-------------------~n~~~~~~l~~aa~~~----g--~v~~~v~--S~~g~~--~~------------ 125 (346)
T 3i6i_A 87 VVSTVGG-------------------ESILDQIALVKAMKAV----G--TIKRFLP--SEFGHD--VN------------ 125 (346)
T ss_dssp EEECCCG-------------------GGGGGHHHHHHHHHHH----C--CCSEEEC--SCCSSC--TT------------
T ss_pred EEECCch-------------------hhHHHHHHHHHHHHHc----C--CceEEee--cccCCC--CC------------
Confidence 9999986 2777888777777532 1 1346664 433321 00
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc-----
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR----- 269 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~----- 269 (366)
...+.+... .|+.+|.+++.+.+. .|++++.|.||.+.+.........
T Consensus 126 ---e~~~~~p~~-----------------~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~ 178 (346)
T 3i6i_A 126 ---RADPVEPGL-----------------NMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLP 178 (346)
T ss_dssp ---TCCCCTTHH-----------------HHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCC
T ss_pred ---ccCcCCCcc-----------------hHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccC
Confidence 000112233 899999998877654 489999999998876543221110
Q ss_pred CCcchhhhhc---cCCCCCHHHHHHHHHhhhhC
Q 017757 270 RPRLTSIIAA---SSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 270 ~~~~~~~~~~---~~~~~~~~~~a~~~~~~i~~ 299 (366)
.......... ...++.++++++.+...+..
T Consensus 179 ~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~ 211 (346)
T 3i6i_A 179 PTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDD 211 (346)
T ss_dssp CSSCEEEETTSCCCEEEECHHHHHHHHHHHTTC
T ss_pred CCceEEEccCCCceEEecCHHHHHHHHHHHHhC
Confidence 0000000000 11256889999988887754
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.5e-14 Score=131.04 Aligned_cols=187 Identities=18% Similarity=0.254 Sum_probs=121.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-------hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-------KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-------~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
+++++||||+|+||++++++|+++|++|++++|+. ++.+.+ +++. ...+..+.+|++|++++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~---~~~v~~v~~D~~d~~~l~~~~~-- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQ---SLGVILLEGDINDHETLVKAIK-- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHH---HTTCEEEECCTTCHHHHHHHHT--
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHH---hCCCEEEEeCCCCHHHHHHHHh--
Confidence 57899999999999999999999999999999986 333322 2232 2357789999999999999988
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
++|+||||||... +.+...+++++ ++.+. .+++| .|..+... +
T Consensus 76 -~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~--v~~~v--~S~~g~~~---~------ 118 (307)
T 2gas_A 76 -QVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGN--VKKFF--PSEFGLDV---D------ 118 (307)
T ss_dssp -TCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCC--CSEEE--CSCCSSCT---T------
T ss_pred -CCCEEEECCcccc-------------------cccHHHHHHHH----HhcCC--ceEEe--ecccccCc---c------
Confidence 6999999999642 22344444444 44321 35776 34444210 0
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
...+..|... .| .+|++++.+.+. .|++++.|.||++.++........
T Consensus 119 -------~~~~~~p~~~-----------------~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~ 166 (307)
T 2gas_A 119 -------RHDAVEPVRQ-----------------VF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQL 166 (307)
T ss_dssp -------SCCCCTTHHH-----------------HH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCT
T ss_pred -------cccCCCcchh-----------------HH-HHHHHHHHHHHH-------cCCCeEEEEcceeecccccccccc
Confidence 0001122233 79 999998887652 379999999999988765432211
Q ss_pred C---Ccchhh--hh---ccCCCCCHHHHHHHHHhhhh
Q 017757 270 R---PRLTSI--IA---ASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 270 ~---~~~~~~--~~---~~~~~~~~~~~a~~~~~~i~ 298 (366)
. ...... .. .....++++++++.+...+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~ 203 (307)
T 2gas_A 167 DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAAN 203 (307)
T ss_dssp TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHT
T ss_pred ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHc
Confidence 0 000000 00 01224588999998887764
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-14 Score=134.09 Aligned_cols=182 Identities=14% Similarity=0.102 Sum_probs=119.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
++|||||+|+||++++++|.++ |++|++++|++++.+.. ....+.++.+|++|+++++++++ ++|+|||
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------~~~~v~~~~~D~~d~~~l~~~~~---~~d~vi~ 71 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------WRGKVSVRQLDYFNQESMVEAFK---GMDTVVF 71 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------GBTTBEEEECCTTCHHHHHHHTT---TCSEEEE
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------hhCCCEEEEcCCCCHHHHHHHHh---CCCEEEE
Confidence 5899999999999999999998 99999999998764321 13468899999999999998887 7899999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
|||..... ..|+.+.. .+++.+++.+ .++||++||.....
T Consensus 72 ~a~~~~~~--------------~~~~~~~~----~l~~aa~~~g---v~~iv~~Ss~~~~~------------------- 111 (289)
T 3e48_A 72 IPSIIHPS--------------FKRIPEVE----NLVYAAKQSG---VAHIIFIGYYADQH------------------- 111 (289)
T ss_dssp CCCCCCSH--------------HHHHHHHH----HHHHHHHHTT---CCEEEEEEESCCST-------------------
T ss_pred eCCCCccc--------------hhhHHHHH----HHHHHHHHcC---CCEEEEEcccCCCC-------------------
Confidence 99864321 12455544 4445555544 56999999954321
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc---CCcch
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR---RPRLT 274 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~---~~~~~ 274 (366)
. . .|..++... .+...+...|++++.+.||.+.++........ .....
T Consensus 112 ---~----~-----------------~~~~~~~~~-----~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~ 162 (289)
T 3e48_A 112 ---N----N-----------------PFHMSPYFG-----YASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIY 162 (289)
T ss_dssp ---T----C-----------------CSTTHHHHH-----HHHHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECC
T ss_pred ---C----C-----------------CCccchhHH-----HHHHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEec
Confidence 1 1 222222211 22223334689999999999998865322111 00000
Q ss_pred hhhhccCCCCCHHHHHHHHHhhhhC
Q 017757 275 SIIAASSGAMKADEVAKKALDGIKS 299 (366)
Q Consensus 275 ~~~~~~~~~~~~~~~a~~~~~~i~~ 299 (366)
..-.....++.++++++.+...+..
T Consensus 163 ~~g~~~~~~i~~~Dva~~~~~~l~~ 187 (289)
T 3e48_A 163 PAGDGRINYITRNDIARGVIAIIKN 187 (289)
T ss_dssp CCTTCEEEEECHHHHHHHHHHHHHC
T ss_pred CCCCceeeeEEHHHHHHHHHHHHcC
Confidence 0000111256899999988877743
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=2.5e-14 Score=136.53 Aligned_cols=119 Identities=16% Similarity=0.070 Sum_probs=94.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCC-----CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEG-----ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G-----~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+++++||||+|+||++++++|+++| ++|++++|+..... . ...++.++.+|++|.++++++++..++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 72 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H---EDNPINYVQCDISDPDDSQAKLSPLTD 72 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C---CSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c---ccCceEEEEeecCCHHHHHHHHhcCCC
Confidence 4789999999999999999999999 99999999876432 1 134678899999999999999986655
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEE-------EecCCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIA-------LMSSQAGQ 177 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv-------~vsS~~~~ 177 (366)
+|+|||+||... ++.+..+++|+.++.++++++.+... +..++| ++||...+
T Consensus 73 ~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~-----~~~~~v~~~g~~i~~Ss~~vy 131 (364)
T 2v6g_A 73 VTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP-----NLKHISLQTGRKHYMGPFESY 131 (364)
T ss_dssp CCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT-----TCCEEEEECCTHHHHCCGGGT
T ss_pred CCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc-----ccceEEeccCceEEEechhhc
Confidence 999999999652 13567889999999999998864311 145776 67776544
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.48 E-value=5.6e-14 Score=134.85 Aligned_cols=135 Identities=19% Similarity=0.123 Sum_probs=108.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
+++||||+|+||++++++|+++|+ +|+..+|+ +|+++++++++ ++|+|||
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------~d~~~l~~~~~---~~d~Vih 52 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------TKEEELESALL---KADFIVH 52 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------CCHHHHHHHHH---HCSEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------CCHHHHHHHhc---cCCEEEE
Confidence 699999999999999999999998 77776664 67788888887 5899999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+||...+. +.+..+++|+.++.++++++. +.+ ...++|++||.....
T Consensus 53 ~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~--~~~~~v~~Ss~~~~~------------------- 99 (369)
T 3st7_A 53 LAGVNRPE--------HDKEFSLGNVSYLDHVLDILT----RNT--KKPAILLSSSIQATQ------------------- 99 (369)
T ss_dssp CCCSBCTT--------CSTTCSSSCCBHHHHHHHHHT----TCS--SCCEEEEEEEGGGGS-------------------
T ss_pred CCcCCCCC--------CHHHHHHHHHHHHHHHHHHHH----HhC--CCCeEEEeCchhhcC-------------------
Confidence 99976542 234467889999998888873 322 124899999976542
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
.. .|+.+|.+.+.+++.++.+. |+++..+.|+.+.++.
T Consensus 100 -------~~-----------------~Y~~sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~ 137 (369)
T 3st7_A 100 -------DN-----------------PYGESKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKW 137 (369)
T ss_dssp -------CS-----------------HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred -------CC-----------------CchHHHHHHHHHHHHHHHHh---CCCEEEEECCceeCCC
Confidence 23 89999999999999998875 7899999999887764
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=138.54 Aligned_cols=203 Identities=15% Similarity=0.007 Sum_probs=129.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
++++|||||+|.||++++++|+++|++|++++|+..+.+ .+.+|+.+. + .+.+.++|+||
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------------~v~~d~~~~--~---~~~l~~~D~Vi 206 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------------KRFWDPLNP--A---SDLLDGADVLV 206 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------------CEECCTTSC--C---TTTTTTCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------------ceeecccch--h---HHhcCCCCEEE
Confidence 679999999999999999999999999999999876421 156677642 1 22345899999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
|+||..... ..+.+..+.++++|+.++.++++++. ++.+ .+++|++||...+..... ....
T Consensus 207 h~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~---~~r~V~~SS~~vyg~~~~--------~~~~-- 267 (516)
T 3oh8_A 207 HLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQ---CTTMISASAVGFYGHDRG--------DEIL-- 267 (516)
T ss_dssp ECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS---CCEEEEEEEGGGGCSEEE--------EEEE--
T ss_pred ECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCC---CCEEEEeCcceEecCCCC--------CCcc--
Confidence 999975433 33556678899999999999999743 2222 569999999765430000 0000
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh---hhhcCC-c
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE---ENKRRP-R 272 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~---~~~~~~-~ 272 (366)
.+..+. +...|+.+|...+.+.+ +....|++++.+.||.+.++.... ...... .
T Consensus 268 -----------------~E~~~~-~~~~y~~~~~~~E~~~~----~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g 325 (516)
T 3oh8_A 268 -----------------TEESES-GDDFLAEVCRDWEHATA----PASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTG 325 (516)
T ss_dssp -----------------CTTSCC-CSSHHHHHHHHHHHTTH----HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC--
T ss_pred -----------------CCCCCC-CcChHHHHHHHHHHHHH----HHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhC
Confidence 000011 22268888887665543 334569999999999998874211 110000 0
Q ss_pred chhhhh---ccCCCCCHHHHHHHHHhhhhCC
Q 017757 273 LTSIIA---ASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 273 ~~~~~~---~~~~~~~~~~~a~~~~~~i~~g 300 (366)
...... ....++..+++++.++..+...
T Consensus 326 ~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~ 356 (516)
T 3oh8_A 326 LGGKFGDGTSWFSWIAIDDLTDIYYRAIVDA 356 (516)
T ss_dssp -CCCCTTSCCEECEEEHHHHHHHHHHHHHCT
T ss_pred CCcccCCCCceEceEeHHHHHHHHHHHHhCc
Confidence 000000 0113457899999988887654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=129.36 Aligned_cols=188 Identities=14% Similarity=0.097 Sum_probs=116.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
.++++||||+|+||++++++|+++|++|++++|+.+...+..+++. ...+.++.+|++|++++.++++ .+|+||
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~---~~~v~~v~~Dl~d~~~l~~a~~---~~d~vi 84 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ---SLGAIIVKGELDEHEKLVELMK---KVDVVI 84 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH---HTTCEEEECCTTCHHHHHHHHT---TCSEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh---cCCCEEEEecCCCHHHHHHHHc---CCCEEE
Confidence 3679999999999999999999999999999998752222222232 2357789999999999999988 689999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
|+++... +.+.. .+++.+++.+. .+++|+ |..+.. . .
T Consensus 85 ~~a~~~~-------------------~~~~~----~l~~aa~~~g~--v~~~v~--S~~g~~--~-~------------- 121 (318)
T 2r6j_A 85 SALAFPQ-------------------ILDQF----KILEAIKVAGN--IKRFLP--SDFGVE--E-D------------- 121 (318)
T ss_dssp ECCCGGG-------------------STTHH----HHHHHHHHHCC--CCEEEC--SCCSSC--T-T-------------
T ss_pred ECCchhh-------------------hHHHH----HHHHHHHhcCC--CCEEEe--eccccC--c-c-------------
Confidence 9998531 22333 34444444321 347763 434321 0 0
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc--CCcch
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR--RPRLT 274 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~--~~~~~ 274 (366)
...+..|... .| .+|.+++.+.+. .|++++.+.||.+........... .....
T Consensus 122 ~~~~~~p~~~-----------------~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~ 176 (318)
T 2r6j_A 122 RINALPPFEA-----------------LI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEI 176 (318)
T ss_dssp TCCCCHHHHH-----------------HH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEE
T ss_pred cccCCCCcch-----------------hH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCce
Confidence 0000111122 78 999998877653 478889999987755433222111 00000
Q ss_pred hhhh---ccCCCCCHHHHHHHHHhhhh
Q 017757 275 SIIA---ASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 275 ~~~~---~~~~~~~~~~~a~~~~~~i~ 298 (366)
.... .....+.++++++.+...+.
T Consensus 177 ~~~~~~~~~~~~i~~~Dva~~~~~~l~ 203 (318)
T 2r6j_A 177 TVYGTGEAKFAMNYEQDIGLYTIKVAT 203 (318)
T ss_dssp EEETTSCCEEEEECHHHHHHHHHHHTT
T ss_pred EEecCCCceeeEeeHHHHHHHHHHHhc
Confidence 0000 01124578999998887764
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=3.5e-13 Score=125.88 Aligned_cols=192 Identities=17% Similarity=0.131 Sum_probs=120.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-----hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-----KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-----~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++++||||+|+||++++++|+++|++|++++|+.. +.+. .+.+. ...+..+.+|++|++++.++++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~---~~~~~~~~~D~~d~~~l~~~~~---~ 76 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK---QLGAKLIEASLDDHQRLVDALK---Q 76 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH---TTTCEEECCCSSCHHHHHHHHT---T
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH---hCCeEEEeCCCCCHHHHHHHHh---C
Confidence 467999999999999999999999999999999853 2222 12222 3467889999999999999887 6
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+|||++|..... .|+.+..++++++ ++.+ ..+++|+ |..+... .
T Consensus 77 ~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g--~v~~~v~--S~~g~~~----~------- 122 (313)
T 1qyd_A 77 VDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAG--NIKRFLP--SEFGMDP----D------- 122 (313)
T ss_dssp CSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSC--CCSEEEC--SCCSSCT----T-------
T ss_pred CCEEEECCccccch---------------hhHHHHHHHHHHH----HhcC--CCceEEe--cCCcCCc----c-------
Confidence 99999999975431 1555665555555 3332 1357774 4443210 0
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc--
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR-- 269 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~-- 269 (366)
.. ..+..|... .| .+|.+++.+.+ ..|++++.+.||.+.++........
T Consensus 123 -~~---~~~~~p~~~-----------------~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~ 173 (313)
T 1qyd_A 123 -IM---EHALQPGSI-----------------TF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDG 173 (313)
T ss_dssp -SC---CCCCSSTTH-----------------HH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTC
T ss_pred -cc---ccCCCCCcc-----------------hH-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccc
Confidence 00 000112233 78 99999887765 2478899999987754322211110
Q ss_pred ----CCcchhhhh---ccCCCCCHHHHHHHHHhhhh
Q 017757 270 ----RPRLTSIIA---ASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 270 ----~~~~~~~~~---~~~~~~~~~~~a~~~~~~i~ 298 (366)
......... .....+.++++++.+...+.
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~ 209 (313)
T 1qyd_A 174 HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID 209 (313)
T ss_dssp CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTT
T ss_pred cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHh
Confidence 000000000 01124578999998887763
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=4.1e-13 Score=125.16 Aligned_cols=82 Identities=18% Similarity=0.273 Sum_probs=65.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH--HHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL--EEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~--~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.++++||||+|+||++++++|+++|++|++++|+.... .+..+.+.......+..+.+|++|++++.++++ .+|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~---~~d~ 80 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK---NVDV 80 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH---TCSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc---CCCE
Confidence 46799999999999999999999999999999985321 111112222123467889999999999999988 6899
Q ss_pred EEEcCCC
Q 017757 115 LVVNQGV 121 (366)
Q Consensus 115 vi~nAG~ 121 (366)
|||+||.
T Consensus 81 vi~~a~~ 87 (308)
T 1qyc_A 81 VISTVGS 87 (308)
T ss_dssp EEECCCG
T ss_pred EEECCcc
Confidence 9999985
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.3e-13 Score=124.80 Aligned_cols=188 Identities=13% Similarity=0.059 Sum_probs=117.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-h----hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-K----KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~----~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++++||||+|+||++++++|+++|++|++++|+. . ...+..+++. ...+.++.+|++|++++.++++ .
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~---~~~v~~v~~D~~d~~~l~~a~~---~ 77 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR---SMGVTIIEGEMEEHEKMVSVLK---Q 77 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH---HTTCEEEECCTTCHHHHHHHHT---T
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh---cCCcEEEEecCCCHHHHHHHHc---C
Confidence 46799999999999999999999999999999986 2 1112222222 2357889999999999999988 6
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+||||||... +.+.. .+++.+++.+. .++|| .|..+... +
T Consensus 78 ~d~vi~~a~~~~-------------------~~~~~----~l~~aa~~~g~--v~~~v--~S~~g~~~---~-------- 119 (321)
T 3c1o_A 78 VDIVISALPFPM-------------------ISSQI----HIINAIKAAGN--IKRFL--PSDFGCEE---D-------- 119 (321)
T ss_dssp CSEEEECCCGGG-------------------SGGGH----HHHHHHHHHCC--CCEEE--CSCCSSCG---G--------
T ss_pred CCEEEECCCccc-------------------hhhHH----HHHHHHHHhCC--ccEEe--ccccccCc---c--------
Confidence 899999998532 22333 44444444320 34776 34443210 0
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc--
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR-- 269 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~-- 269 (366)
...+..+... .| .+|++++.+.+. .|++++.|.||.+.++........
T Consensus 120 -----~~~~~~p~~~-----------------~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~ 169 (321)
T 3c1o_A 120 -----RIKPLPPFES-----------------VL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSP 169 (321)
T ss_dssp -----GCCCCHHHHH-----------------HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCS
T ss_pred -----ccccCCCcch-----------------HH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccc
Confidence 0000111123 79 999999887753 368888899998765533221110
Q ss_pred ----CCcchhhh--hccCCCCCHHHHHHHHHhhhh
Q 017757 270 ----RPRLTSII--AASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 270 ----~~~~~~~~--~~~~~~~~~~~~a~~~~~~i~ 298 (366)
........ ......+.++++++.+...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~ 204 (321)
T 3c1o_A 170 HPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVAC 204 (321)
T ss_dssp SCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHH
T ss_pred cccccCceEEecCCCcceeEeeHHHHHHHHHHHHh
Confidence 00000000 011225588999998887764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.5e-11 Score=112.77 Aligned_cols=201 Identities=13% Similarity=0.084 Sum_probs=120.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+||||||+|.||++++++|.++|++|+++.|++.. .++ ..| + + ..+.+..+|.+||.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------~~~---~~~----~-~--~~~~l~~~d~vihl 58 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------GRI---TWD----E-L--AASGLPSCDAAVNL 58 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------TEE---EHH----H-H--HHHCCCSCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------Cee---ecc----h-h--hHhhccCCCEEEEe
Confidence 48999999999999999999999999999998643 122 111 1 1 11234689999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
||..........+.+..+..+++|+.++..+.+.+... +. ...++|+.||...+..... ....| .
T Consensus 59 a~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~----~~-~~~~~i~~Ss~~vyg~~~~---------~~~~E-~ 123 (298)
T 4b4o_A 59 AGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA----PQ-PPKAWVLVTGVAYYQPSLT---------AEYDE-D 123 (298)
T ss_dssp CCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC----SS-CCSEEEEEEEGGGSCCCSS---------CCBCT-T
T ss_pred ccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh----CC-CceEEEEEeeeeeecCCCC---------Ccccc-c
Confidence 98654444445577888889999999988887766322 11 1456788888665541100 00000 0
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc-------CC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR-------RP 271 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~-------~~ 271 (366)
. +..... .|+..|...+. +......++++..+.||.|..+.......- ..
T Consensus 124 ~-p~~~~~-----------------~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~ 180 (298)
T 4b4o_A 124 S-PGGDFD-----------------FFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLG 180 (298)
T ss_dssp C-CCSCSS-----------------HHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCC
T ss_pred C-Cccccc-----------------hhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCc
Confidence 0 111111 45444443332 223456789999999999987742211100 00
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 272 RLTSIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
.....-.....++..+++++.+...+...
T Consensus 181 ~~~g~g~~~~~~ihv~Dva~a~~~~~~~~ 209 (298)
T 4b4o_A 181 GPIGSGHQFFPWIHIGDLAGILTHALEAN 209 (298)
T ss_dssp CCBTTSCSBCCEEEHHHHHHHHHHHHHCT
T ss_pred ceecccCceeecCcHHHHHHHHHHHHhCC
Confidence 00000011122456899999888877554
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.6e-13 Score=125.16 Aligned_cols=110 Identities=17% Similarity=0.197 Sum_probs=85.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.+++||+++||||+||+|++++++|+++|++|++++|+.++++++.+++.... .+.++.+|++++++++++++ .+
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~--~~~~~~~D~~~~~~~~~~~~---~~ 189 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAVK---GA 189 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHTT---TC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEecCCCHHHHHHHHH---hC
Confidence 45789999999999999999999999999999999999988888887775432 35667899999999988887 57
Q ss_pred cEEEEcCCCCCC-CCccCCCH-HHHHHHHHHHHHHHH
Q 017757 113 DVLVVNQGVFVP-GELEVQSL-DEVRLMIDVNITGSF 147 (366)
Q Consensus 113 d~vi~nAG~~~~-~~~~~~~~-~~~~~~~~vN~~~~~ 147 (366)
|++|||||.... .+..+.+. ++++..+++|+.+++
T Consensus 190 DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 190 HFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp SEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred CEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 999999986432 22222222 344446666666655
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.6e-10 Score=109.31 Aligned_cols=170 Identities=15% Similarity=0.112 Sum_probs=106.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-------RVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.+++||||+|.||.+++..|+++|. +|+++++++ ++.+....++... ... +. .|+++.+++.+.++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~-~~~--~~-~di~~~~~~~~a~~- 79 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC-AFP--LL-AGLEATDDPKVAFK- 79 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-TCT--TE-EEEEEESCHHHHTT-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc-ccc--cc-CCeEeccChHHHhC-
Confidence 3699999999999999999999996 899999875 2223222233221 111 12 46665555555554
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
..|+|||.||..... ..+ ..+.+++|+.++..+++++..+- .. ..+++++|+......+.
T Consensus 80 --~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~---~~~vvv~snp~~~~~~~------- 139 (327)
T 1y7t_A 80 --DADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KK---DVKVLVVGNPANTNALI------- 139 (327)
T ss_dssp --TCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CT---TCEEEECSSSHHHHHHH-------
T ss_pred --CCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CC---CeEEEEeCCchhhhHHH-------
Confidence 689999999975432 123 34578999999999999886541 01 35788877643211000
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
.+...++.+... .|+.+|...+.+.+.++..+ |+++..|.|..|
T Consensus 140 ------~~~~~~~~~p~~-----------------~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V 183 (327)
T 1y7t_A 140 ------AYKNAPGLNPRN-----------------FTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTV 183 (327)
T ss_dssp ------HHHTCTTSCGGG-----------------EEECCHHHHHHHHHHHHHHH---TCCGGGEECCEE
T ss_pred ------HHHHcCCCChhh-----------------eeccchHHHHHHHHHHHHHh---CcChhheeeeEE
Confidence 000000122223 79999999999888888765 444444444443
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=4.8e-09 Score=93.26 Aligned_cols=79 Identities=24% Similarity=0.268 Sum_probs=61.7
Q ss_pred CCCCCEEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCC
Q 017757 34 PIKDRHVFITGG----------------SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR 97 (366)
Q Consensus 34 ~l~gk~vLITGa----------------s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls 97 (366)
+++||++||||| +||||.++|++|+++|++|++++++.. ++ . ...+ -.+|++
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~----~~g~--~~~dv~ 72 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T----PPFV--KRVDVM 72 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C----CTTE--EEEECC
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c----CCCC--eEEccC
Confidence 589999999999 689999999999999999999988652 11 0 1112 357999
Q ss_pred CHHHHHHH-HHhcCCCcEEEEcCCCCCC
Q 017757 98 DFDAVKTA-LDEAGPVDVLVVNQGVFVP 124 (366)
Q Consensus 98 ~~~~v~~~-~~~~~~id~vi~nAG~~~~ 124 (366)
+.+++.+. .+.++++|++|||||+...
T Consensus 73 ~~~~~~~~v~~~~~~~Dili~~Aav~d~ 100 (226)
T 1u7z_A 73 TALEMEAAVNASVQQQNIFIGCAAVADY 100 (226)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred cHHHHHHHHHHhcCCCCEEEECCcccCC
Confidence 98776544 4557899999999998643
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.1e-08 Score=79.24 Aligned_cols=74 Identities=19% Similarity=0.229 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.+++++|+|+ |++|+++++.|.++| ++|++++|++++.+... ...+..+.+|+++.++++++++ .+|+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~---~~d~ 72 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-------RMGVATKQVDAKDEAGLAKALG---GFDA 72 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-------TTTCEEEECCTTCHHHHHHHTT---TCSE
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-------hCCCcEEEecCCCHHHHHHHHc---CCCE
Confidence 4578999999 999999999999999 89999999987766543 2245678899999998888876 7899
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
+|++++
T Consensus 73 vi~~~~ 78 (118)
T 3ic5_A 73 VISAAP 78 (118)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 999996
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.71 E-value=6.1e-08 Score=94.17 Aligned_cols=82 Identities=20% Similarity=0.272 Sum_probs=72.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCC---CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEG---ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G---~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++++|+|| |+||+++++.|+++| .+|++++|+.+++++..+++....+.++..+.+|++|.+++++++++. ++|+
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-~~Dv 79 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-KPQI 79 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-CCCE
Confidence 57899998 899999999999998 489999999999998888876544456889999999999999999876 5899
Q ss_pred EEEcCCC
Q 017757 115 LVVNQGV 121 (366)
Q Consensus 115 vi~nAG~ 121 (366)
||||+|.
T Consensus 80 Vin~ag~ 86 (405)
T 4ina_A 80 VLNIALP 86 (405)
T ss_dssp EEECSCG
T ss_pred EEECCCc
Confidence 9999985
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.68 E-value=3.9e-08 Score=87.65 Aligned_cols=92 Identities=12% Similarity=0.195 Sum_probs=65.1
Q ss_pred CCCEEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH
Q 017757 36 KDRHVFITGG----------------SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99 (366)
Q Consensus 36 ~gk~vLITGa----------------s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~ 99 (366)
+||++||||| +|++|.++|++|+++|++|++++|+... .. ..+..+ ...|+.+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-------~~~~~~--~~~~v~s~ 71 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-------EPHPNL--SIREITNT 71 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-------CCCTTE--EEEECCSH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-------cCCCCe--EEEEHhHH
Confidence 5899999999 7889999999999999999999997532 10 001123 34566676
Q ss_pred HHHHHH-HHhcCCCcEEEEcCCCCCCCCccCCCHHHHHH
Q 017757 100 DAVKTA-LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRL 137 (366)
Q Consensus 100 ~~v~~~-~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~ 137 (366)
++..+. .+.++++|++|+||++....+....+.+++.+
T Consensus 72 ~em~~~v~~~~~~~Dili~aAAvsD~~p~~~~~~e~~~~ 110 (232)
T 2gk4_A 72 KDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEVQA 110 (232)
T ss_dssp HHHHHHHHHHGGGCSEEEECSBCCSEEEEEEEEHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEcCccccccchhhcchhhhhc
Confidence 665444 44568899999999987655555445555543
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.59 E-value=6.9e-08 Score=83.96 Aligned_cols=101 Identities=23% Similarity=0.283 Sum_probs=73.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++||||+||||+++++.+...|++|++++|++++.+.+.+ . +... ..|.++.+..+.+.+.. +++|
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~-g~~~---~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----L-GVEY---VGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----T-CCSE---EEETTCSTHHHHHHHHTTTCCEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c-CCCE---EeeCCcHHHHHHHHHHhCCCCCe
Confidence 58999999999999999999999999999999998776554321 1 3222 24777766555555543 3699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++|+|+|.. ..+.+++.+++ .|+++.+++..
T Consensus 110 ~vi~~~g~~--------------------------~~~~~~~~l~~-----~G~~v~~g~~~ 140 (198)
T 1pqw_A 110 VVLNSLAGE--------------------------AIQRGVQILAP-----GGRFIELGKKD 140 (198)
T ss_dssp EEEECCCTH--------------------------HHHHHHHTEEE-----EEEEEECSCGG
T ss_pred EEEECCchH--------------------------HHHHHHHHhcc-----CCEEEEEcCCC
Confidence 999999720 13445566655 57999998854
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=2.4e-09 Score=105.17 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=41.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQ 79 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~ 79 (366)
.+.+.||+++|||++ +||+++|+.|+..|++|+++++++.+.+++..
T Consensus 260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~ 306 (488)
T 3ond_A 260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM 306 (488)
T ss_dssp CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 457899999999987 99999999999999999999999877665543
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.6e-07 Score=92.43 Aligned_cols=79 Identities=15% Similarity=0.195 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
|++|+++|+| +|++|++++++|++.|++|++++|+.++++++.+.+ ..+..+.+|++|.++++++++ .+|+
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~-----~~~~~~~~Dv~d~~~l~~~l~---~~Dv 71 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-----QHSTPISLDVNDDAALDAEVA---KHDL 71 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC-----TTEEEEECCTTCHHHHHHHHT---TSSE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc-----CCceEEEeecCCHHHHHHHHc---CCcE
Confidence 3578999998 799999999999999999999999987665543322 136778899999999988886 7999
Q ss_pred EEEcCCCC
Q 017757 115 LVVNQGVF 122 (366)
Q Consensus 115 vi~nAG~~ 122 (366)
||||++..
T Consensus 72 VIn~a~~~ 79 (450)
T 1ff9_A 72 VISLIPYT 79 (450)
T ss_dssp EEECCC--
T ss_pred EEECCccc
Confidence 99999863
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.9e-07 Score=89.57 Aligned_cols=108 Identities=23% Similarity=0.238 Sum_probs=78.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.+++++++|+|+ |+||+++++.+...|++|++++|++++++.+.+.+ +.. +.+|.++.+++++.++ ..|
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----g~~---~~~~~~~~~~l~~~~~---~~D 231 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----GGR---VITLTATEANIKKSVQ---HAD 231 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTS---EEEEECCHHHHHHHHH---HCS
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----Cce---EEEecCCHHHHHHHHh---CCC
Confidence 478999999999 99999999999999999999999988776654433 333 4568888888888876 689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++|+|+|..... .+..+.+..++.|++ .++||++++..+
T Consensus 232 vVi~~~g~~~~~-------------------~~~li~~~~l~~mk~-----gg~iV~v~~~~g 270 (369)
T 2eez_A 232 LLIGAVLVPGAK-------------------APKLVTRDMLSLMKE-----GAVIVDVAVDQG 270 (369)
T ss_dssp EEEECCC--------------------------CCSCHHHHTTSCT-----TCEEEECC----
T ss_pred EEEECCCCCccc-------------------cchhHHHHHHHhhcC-----CCEEEEEecCCC
Confidence 999999864211 112334566677754 579999998654
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.47 E-value=7.8e-08 Score=88.99 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=62.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.++++|+++|||++ |+|+++++.|+++| +|++++|+.++++++.+++....+... .+.+|+++. .+.++++
T Consensus 124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~------~~~~~~~ 194 (287)
T 1nvt_A 124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL------DVDLDGV 194 (287)
T ss_dssp CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT------TCCCTTC
T ss_pred CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH------HHhhCCC
Confidence 35789999999987 99999999999999 999999999888888777754321110 122344441 2345789
Q ss_pred cEEEEcCCCCC
Q 017757 113 DVLVVNQGVFV 123 (366)
Q Consensus 113 d~vi~nAG~~~ 123 (366)
|++|||+|...
T Consensus 195 DilVn~ag~~~ 205 (287)
T 1nvt_A 195 DIIINATPIGM 205 (287)
T ss_dssp CEEEECSCTTC
T ss_pred CEEEECCCCCC
Confidence 99999999754
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=2e-06 Score=80.42 Aligned_cols=84 Identities=23% Similarity=0.331 Sum_probs=68.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC---chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS---GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
..+++||+++|+|+ ||+|++++..|++.|+ +|++++|+ .++++++++++....+..+. ..++.+.+++.+.+.
T Consensus 149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~--~~~~~~~~~l~~~l~ 225 (315)
T 3tnl_A 149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQ--LFDIEDHEQLRKEIA 225 (315)
T ss_dssp TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHHH
T ss_pred CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceE--EeccchHHHHHhhhc
Confidence 35789999999997 7999999999999999 89999999 88888888888766554443 456777777776666
Q ss_pred hcCCCcEEEEcCCC
Q 017757 108 EAGPVDVLVVNQGV 121 (366)
Q Consensus 108 ~~~~id~vi~nAG~ 121 (366)
..|+|||+...
T Consensus 226 ---~aDiIINaTp~ 236 (315)
T 3tnl_A 226 ---ESVIFTNATGV 236 (315)
T ss_dssp ---TCSEEEECSST
T ss_pred ---CCCEEEECccC
Confidence 68999999764
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=4.1e-08 Score=98.51 Aligned_cols=98 Identities=24% Similarity=0.315 Sum_probs=68.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GP 111 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~ 111 (366)
++++|+++|||| ||+|++++++|+++|++|++++|+.++++++.+++. .++. ++.| + +++ ..
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~----~~~~----~~~d---l----~~~~~~~ 424 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG----GKAL----SLTD---L----DNYHPED 424 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT----C-CE----ETTT---T----TTC--CC
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----Ccee----eHHH---h----hhccccC
Confidence 578999999999 599999999999999999999999988887776652 2222 2222 1 222 35
Q ss_pred CcEEEEcCCCCCC-----CCccCCCHHHHHHHHHHHHHHHH
Q 017757 112 VDVLVVNQGVFVP-----GELEVQSLDEVRLMIDVNITGSF 147 (366)
Q Consensus 112 id~vi~nAG~~~~-----~~~~~~~~~~~~~~~~vN~~~~~ 147 (366)
+|++|||+|.... .++.+.+.+++..++++|+.+..
T Consensus 425 ~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~ 465 (523)
T 2o7s_A 425 GMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI 465 (523)
T ss_dssp SEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred ceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence 8999999997432 34555667778889999998753
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=7.2e-07 Score=84.00 Aligned_cols=77 Identities=21% Similarity=0.337 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++||||+||||+++++.+...|++|+++++++++++.+ +++ +.. ..+|.++.+++.+.+.+. +++|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~----g~~---~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI----GFD---AAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TCS---EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc----CCc---EEEecCCHHHHHHHHHHHhCCCCe
Confidence 589999999999999999999999999999999988776655 333 322 235777734444444332 5799
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++|+|+|
T Consensus 217 ~vi~~~g 223 (333)
T 1v3u_A 217 CYFDNVG 223 (333)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.2e-06 Score=86.41 Aligned_cols=81 Identities=16% Similarity=0.152 Sum_probs=64.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
..++++++++|+|+ |++|+++++.|++. |.+|++++|+.++++++.+. . .+..+.+|+++.+++.++++
T Consensus 18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~--~~~~~~~D~~d~~~l~~~l~--- 87 (467)
T 2axq_A 18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S--GSKAISLDVTDDSALDKVLA--- 87 (467)
T ss_dssp -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G--TCEEEECCTTCHHHHHHHHH---
T ss_pred ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c--CCcEEEEecCCHHHHHHHHc---
Confidence 45678899999997 99999999999998 78999999998877665433 1 34567899999999988887
Q ss_pred CCcEEEEcCCCC
Q 017757 111 PVDVLVVNQGVF 122 (366)
Q Consensus 111 ~id~vi~nAG~~ 122 (366)
.+|+|||+++..
T Consensus 88 ~~DvVIn~tp~~ 99 (467)
T 2axq_A 88 DNDVVISLIPYT 99 (467)
T ss_dssp TSSEEEECSCGG
T ss_pred CCCEEEECCchh
Confidence 689999999864
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=9.7e-07 Score=82.87 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=74.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++||||+||||+++++.+...|++|++++|++++++.+.+ + +... .+|.++.+..+++.+.. +++|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~----g~~~---~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A----GAWQ---VINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H----TCSE---EEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c----CCCE---EEECCCccHHHHHHHHhCCCCce
Confidence 58999999999999999999999999999999999877665533 2 3222 34777766555555543 3699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++|+|+|.. ..+.+++.+++ .|+++.+++..+
T Consensus 212 ~vi~~~g~~--------------------------~~~~~~~~l~~-----~G~iv~~g~~~~ 243 (327)
T 1qor_A 212 VVYDSVGRD--------------------------TWERSLDCLQR-----RGLMVSFGNSSG 243 (327)
T ss_dssp EEEECSCGG--------------------------GHHHHHHTEEE-----EEEEEECCCTTC
T ss_pred EEEECCchH--------------------------HHHHHHHHhcC-----CCEEEEEecCCC
Confidence 999999821 12445555554 579999987543
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.30 E-value=8.4e-07 Score=84.09 Aligned_cols=102 Identities=23% Similarity=0.190 Sum_probs=73.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|+++||+||+||||+++++.+...|++|++++|++++++.+ +++ +.. ...|.++.+++.+.+++. +++|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~----g~~---~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI----GGE---VFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT----TCC---EEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc----CCc---eEEecCccHhHHHHHHHHhCCCCC
Confidence 589999999999999999999999999999999988776543 222 322 234877544555444432 3799
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++|+|+|.. + .++.+++.+++ .|+++.+++..
T Consensus 241 ~vi~~~g~~----------~---------------~~~~~~~~l~~-----~G~iv~~g~~~ 272 (347)
T 2hcy_A 241 GVINVSVSE----------A---------------AIEASTRYVRA-----NGTTVLVGMPA 272 (347)
T ss_dssp EEEECSSCH----------H---------------HHHHHTTSEEE-----EEEEEECCCCT
T ss_pred EEEECCCcH----------H---------------HHHHHHHHHhc-----CCEEEEEeCCC
Confidence 999999831 1 23455555554 57999998754
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=5e-07 Score=75.90 Aligned_cols=73 Identities=15% Similarity=0.130 Sum_probs=57.3
Q ss_pred ChhHHHHHHHHHHCCCeEEEEecCchhHH---HHHHHHHhhcCCeEEEEEecCCCH--HHHHHHHHh----cCCCcEEEE
Q 017757 47 SGIGLALAHQAAKEGARVSILARSGKKLE---EAKQSIQLATGIEVATYSADVRDF--DAVKTALDE----AGPVDVLVV 117 (366)
Q Consensus 47 ~gIG~aia~~L~~~G~~V~l~~r~~~~~~---~~~~~l~~~~~~~v~~~~~Dls~~--~~v~~~~~~----~~~id~vi~ 117 (366)
+-++.++++.|+++|++|++..|+....+ +..+.+.. .|.++..+++|++++ ++++++++. +++ |++||
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~-~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn 103 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ-AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH 103 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH-TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH-cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence 35789999999999999999998765432 12333433 377888999999999 999888764 577 99999
Q ss_pred cCCC
Q 017757 118 NQGV 121 (366)
Q Consensus 118 nAG~ 121 (366)
|||.
T Consensus 104 nAgg 107 (157)
T 3gxh_A 104 CLAN 107 (157)
T ss_dssp CSBS
T ss_pred CCCC
Confidence 9996
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.3e-06 Score=80.12 Aligned_cols=78 Identities=13% Similarity=0.202 Sum_probs=59.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++... + .+. ..|+ +++. + +..
T Consensus 115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~-~-~~~--~~~~---~~~~----~-~~~ 181 (271)
T 1nyt_A 115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT-G-SIQ--ALSM---DELE----G-HEF 181 (271)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG-S-SEE--ECCS---GGGT----T-CCC
T ss_pred cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc-C-Cee--EecH---HHhc----c-CCC
Confidence 3578999999998 79999999999999999999999999888887776532 1 221 2332 2221 1 589
Q ss_pred cEEEEcCCCCC
Q 017757 113 DVLVVNQGVFV 123 (366)
Q Consensus 113 d~vi~nAG~~~ 123 (366)
|++|||++...
T Consensus 182 DivVn~t~~~~ 192 (271)
T 1nyt_A 182 DLIINATSSGI 192 (271)
T ss_dssp SEEEECCSCGG
T ss_pred CEEEECCCCCC
Confidence 99999999654
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.6e-06 Score=82.51 Aligned_cols=102 Identities=14% Similarity=0.218 Sum_probs=72.0
Q ss_pred CC--CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CC
Q 017757 36 KD--RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GP 111 (366)
Q Consensus 36 ~g--k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~ 111 (366)
.| ++++||||+||||+++++.+...|+ +|+++++++++++.+.+++ +.. ..+|.++.+..+.+.+.. ++
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~----g~~---~~~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL----GFD---AAINYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS----CCS---EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----CCc---eEEecCchHHHHHHHHhcCCC
Confidence 46 9999999999999999999999999 9999999987766554323 322 235776644334443332 36
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+|++|+|+|. + ..+.+++.+++ .|+++.++...
T Consensus 231 ~d~vi~~~G~-----------~---------------~~~~~~~~l~~-----~G~iv~~G~~~ 263 (357)
T 2zb4_A 231 VDVYFDNVGG-----------N---------------ISDTVISQMNE-----NSHIILCGQIS 263 (357)
T ss_dssp EEEEEESCCH-----------H---------------HHHHHHHTEEE-----EEEEEECCCGG
T ss_pred CCEEEECCCH-----------H---------------HHHHHHHHhcc-----CcEEEEECCcc
Confidence 9999999982 0 13345555554 57999988754
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.24 E-value=3.7e-06 Score=68.75 Aligned_cols=76 Identities=16% Similarity=0.239 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.++++++|+|+ |.+|+++++.|.++|++|+++++++++.+...+. .+.++..|.++++.++++ .....|+
T Consensus 4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-------~~~~~~gd~~~~~~l~~~--~~~~~d~ 73 (141)
T 3llv_A 4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-------GFDAVIADPTDESFYRSL--DLEGVSA 73 (141)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------TCEEEECCTTCHHHHHHS--CCTTCSE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-------CCcEEECCCCCHHHHHhC--CcccCCE
Confidence 34678999998 7899999999999999999999998876655431 356788999999887765 2347899
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
+|.+.+
T Consensus 74 vi~~~~ 79 (141)
T 3llv_A 74 VLITGS 79 (141)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 998886
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.7e-06 Score=70.55 Aligned_cols=78 Identities=13% Similarity=0.182 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++++++++|+|+ |++|+.+++.|.+.|++|+++++++++.+.. ... ....+..|.++.+.++++ ..++.|
T Consensus 3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~---~~~~~~~d~~~~~~l~~~--~~~~~d 72 (144)
T 2hmt_A 3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY---ATHAVIANATEENELLSL--GIRNFE 72 (144)
T ss_dssp ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT---CSEEEECCTTCHHHHHTT--TGGGCS
T ss_pred CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh---CCEEEEeCCCCHHHHHhc--CCCCCC
Confidence 356788999998 9999999999999999999999987654432 211 234577899998766554 134789
Q ss_pred EEEEcCCC
Q 017757 114 VLVVNQGV 121 (366)
Q Consensus 114 ~vi~nAG~ 121 (366)
++|++++.
T Consensus 73 ~vi~~~~~ 80 (144)
T 2hmt_A 73 YVIVAIGA 80 (144)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99999974
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=5.4e-06 Score=78.78 Aligned_cols=78 Identities=26% Similarity=0.284 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++|+||+||||+++++.+...|++|++++|++++++.+ +++ +.+ ..+|.++.+..+++.+.. +++|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----g~~---~~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL----GAA---AGFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH----TCS---EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CCc---EEEecCChHHHHHHHHHhcCCCce
Confidence 589999999999999999999999999999999998877655 333 322 235766655555555443 3699
Q ss_pred EEEEcCCC
Q 017757 114 VLVVNQGV 121 (366)
Q Consensus 114 ~vi~nAG~ 121 (366)
++|+|+|.
T Consensus 234 ~vi~~~G~ 241 (354)
T 2j8z_A 234 LILDCIGG 241 (354)
T ss_dssp EEEESSCG
T ss_pred EEEECCCc
Confidence 99999983
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.8e-06 Score=78.30 Aligned_cols=101 Identities=19% Similarity=0.210 Sum_probs=73.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++||||+||||+++++.+...|++|++++|++++++.+.+ + +... ..|.++.+..+++.+.. .++|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~----g~~~---~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L----GCHH---TINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H----TCSE---EEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CCCE---EEECCCHHHHHHHHHHhCCCCCe
Confidence 58999999999999999999999999999999999877665532 2 3232 34777655555544432 3699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++|+|+|.. ..+.+++.+++ .|+++.+++..
T Consensus 217 ~vi~~~g~~--------------------------~~~~~~~~l~~-----~G~iv~~g~~~ 247 (333)
T 1wly_A 217 VVYDSIGKD--------------------------TLQKSLDCLRP-----RGMCAAYGHAS 247 (333)
T ss_dssp EEEECSCTT--------------------------THHHHHHTEEE-----EEEEEECCCTT
T ss_pred EEEECCcHH--------------------------HHHHHHHhhcc-----CCEEEEEecCC
Confidence 999999841 13344555554 57999998754
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=2.1e-05 Score=73.41 Aligned_cols=85 Identities=24% Similarity=0.313 Sum_probs=65.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC---chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS---GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
..++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+ .++++++++++....+..+.. .+..+.+.+.+.+.
T Consensus 143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~--~~~~~l~~~~~~l~ 219 (312)
T 3t4e_A 143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTV--TDLADQHAFTEALA 219 (312)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEE--EETTCHHHHHHHHH
T ss_pred CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEE--echHhhhhhHhhcc
Confidence 35689999999997 8999999999999998 79999999 778888888887655544433 45556544444444
Q ss_pred hcCCCcEEEEcCCCC
Q 017757 108 EAGPVDVLVVNQGVF 122 (366)
Q Consensus 108 ~~~~id~vi~nAG~~ 122 (366)
..|+|||+....
T Consensus 220 ---~~DiIINaTp~G 231 (312)
T 3t4e_A 220 ---SADILTNGTKVG 231 (312)
T ss_dssp ---HCSEEEECSSTT
T ss_pred ---CceEEEECCcCC
Confidence 479999997653
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.09 E-value=6.4e-06 Score=78.19 Aligned_cols=77 Identities=17% Similarity=0.225 Sum_probs=59.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++|+||+||||+++++.+...|++|+++++++++++.+ +++ +.. ..+|.++.+..+++.+.. +++|
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----ga~---~~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN----GAH---EVFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TCS---EEEETTSTTHHHHHHHHHCTTCEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc----CCC---EEEeCCCchHHHHHHHHcCCCCcE
Confidence 589999999999999999999999999999999998776633 222 322 235777765555555443 3799
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++|+|+|
T Consensus 242 ~vi~~~G 248 (351)
T 1yb5_A 242 IIIEMLA 248 (351)
T ss_dssp EEEESCH
T ss_pred EEEECCC
Confidence 9999998
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.3e-05 Score=75.68 Aligned_cols=102 Identities=24% Similarity=0.283 Sum_probs=72.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++|+||+|++|+.+++.+...|++|+++++++++++.+. ++ +... .+|.++.+-.+++.+.. .++|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~----ga~~---~~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL----GADE---TVNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH----TCSE---EEETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc----CCCE---EEcCCcccHHHHHHHHhCCCCce
Confidence 5899999999999999999999999999999999988776553 22 3222 24776654333333322 3799
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++|+|+| .. ..+.+++.+++ .|+++.+++..+
T Consensus 238 ~vi~~~g-~~-------------------------~~~~~~~~l~~-----~G~~v~~g~~~~ 269 (343)
T 2eih_A 238 KVVDHTG-AL-------------------------YFEGVIKATAN-----GGRIAIAGASSG 269 (343)
T ss_dssp EEEESSC-SS-------------------------SHHHHHHHEEE-----EEEEEESSCCCS
T ss_pred EEEECCC-HH-------------------------HHHHHHHhhcc-----CCEEEEEecCCC
Confidence 9999998 21 12445555555 579999987543
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=6.3e-06 Score=77.57 Aligned_cols=103 Identities=22% Similarity=0.272 Sum_probs=73.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id~ 114 (366)
.|++++|+||+||||.++++.+...|++|+++++++++++.+.+++ +... ..|.++.+..+.+.+.. +++|+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~~~~~~~~~d~ 221 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL----GFDG---AIDYKNEDLAAGLKRECPKGIDV 221 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT----CCSE---EEETTTSCHHHHHHHHCTTCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCCE---EEECCCHHHHHHHHHhcCCCceE
Confidence 6899999999999999999999999999999999988776653433 3222 24666654444444332 47999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
+|+|+|.. ..+.+++.+++ .|+++.++...+
T Consensus 222 vi~~~g~~--------------------------~~~~~~~~l~~-----~G~iv~~G~~~~ 252 (336)
T 4b7c_A 222 FFDNVGGE--------------------------ILDTVLTRIAF-----KARIVLCGAISQ 252 (336)
T ss_dssp EEESSCHH--------------------------HHHHHHTTEEE-----EEEEEECCCGGG
T ss_pred EEECCCcc--------------------------hHHHHHHHHhh-----CCEEEEEeeccc
Confidence 99999820 23344555554 589999987653
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=3.6e-06 Score=79.53 Aligned_cols=78 Identities=21% Similarity=0.322 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++|+||+|+||+++++.+...|++|+++++++++++.+.+++ +... ..|.++.+++.+.+++. +++|
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~----g~~~---~~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF----GFDD---AFNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS----CCSE---EEETTSCSCSHHHHHHHCTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCce---EEecCCHHHHHHHHHHHhCCCCc
Confidence 5899999999999999999999999999999999987766554333 3322 24666543333333332 4799
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++|+|+|
T Consensus 228 ~vi~~~g 234 (345)
T 2j3h_A 228 IYFENVG 234 (345)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.99 E-value=1.1e-05 Score=74.18 Aligned_cols=79 Identities=20% Similarity=0.289 Sum_probs=61.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++..... .++. ..+.. ++.+.++ .
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~---~l~~~l~---~ 194 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDAR---GIEDVIA---A 194 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECST---THHHHHH---H
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHH---HHHHHHh---c
Confidence 688999999998 8999999999999999 699999999999988888875432 2333 23332 3444454 4
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
.|+|||+...
T Consensus 195 ~DiVInaTp~ 204 (283)
T 3jyo_A 195 ADGVVNATPM 204 (283)
T ss_dssp SSEEEECSST
T ss_pred CCEEEECCCC
Confidence 7999999764
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.4e-05 Score=75.22 Aligned_cols=102 Identities=22% Similarity=0.294 Sum_probs=72.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++|+||+|+||.+++..+...|++|+++++++++++.+ +++ +.+. ..|.++.+..+.+.+.. .++|
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----ga~~---~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY----GAEY---LINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TCSE---EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----CCcE---EEeCCCchHHHHHHHHhCCCCce
Confidence 689999999999999999999999999999999998876643 222 3332 23555544444444433 3699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++|+|+|.. ..+.+++.+++ .|+++.++...+
T Consensus 220 ~vid~~g~~--------------------------~~~~~~~~l~~-----~G~iv~~G~~~~ 251 (334)
T 3qwb_A 220 ASFDSVGKD--------------------------TFEISLAALKR-----KGVFVSFGNASG 251 (334)
T ss_dssp EEEECCGGG--------------------------GHHHHHHHEEE-----EEEEEECCCTTC
T ss_pred EEEECCChH--------------------------HHHHHHHHhcc-----CCEEEEEcCCCC
Confidence 999999841 12344555555 589999987543
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=4.1e-05 Score=69.99 Aligned_cols=78 Identities=14% Similarity=0.193 Sum_probs=58.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++... + .+.. .|+. ++. + +..
T Consensus 115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~-~-~~~~--~~~~---~~~---~--~~~ 181 (272)
T 1p77_A 115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-G-NIQA--VSMD---SIP---L--QTY 181 (272)
T ss_dssp CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-S-CEEE--EEGG---GCC---C--SCC
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc-C-CeEE--eeHH---Hhc---c--CCC
Confidence 4678999999998 89999999999999999999999999888888776542 1 2322 3331 110 1 479
Q ss_pred cEEEEcCCCCC
Q 017757 113 DVLVVNQGVFV 123 (366)
Q Consensus 113 d~vi~nAG~~~ 123 (366)
|++||+++...
T Consensus 182 DivIn~t~~~~ 192 (272)
T 1p77_A 182 DLVINATSAGL 192 (272)
T ss_dssp SEEEECCCC--
T ss_pred CEEEECCCCCC
Confidence 99999998654
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.8e-05 Score=74.45 Aligned_cols=121 Identities=16% Similarity=0.093 Sum_probs=79.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecC----chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGA-------RVSILARS----GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~----~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~ 105 (366)
..+++||||+|.+|..++..|+.+|. +|++++++ .++++....++.... ... ..|+...++..+.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~-~~~---~~~i~~~~~~~~a 80 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA-FPL---LAGMTAHADPMTA 80 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT-CTT---EEEEEEESSHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc-ccc---cCcEEEecCcHHH
Confidence 35799999999999999999999985 79999998 555554444454321 111 1244433334444
Q ss_pred HHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 106 LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 106 ~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++ ..|+|||+||..... ..+. .+.+..|+.....+++.+.++-. . .++|+++|.-.
T Consensus 81 l~---~aD~Vi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~~--p---~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FK---DADVALLVGARPRGP---GMER---KDLLEANAQIFTVQGKAIDAVAS--R---NIKVLVVGNPA 136 (329)
T ss_dssp TT---TCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHSC--T---TCEEEECSSSH
T ss_pred hC---CCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhcC--C---CeEEEEccCch
Confidence 44 789999999965421 1233 34678888888777777754420 1 46899998744
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.7e-05 Score=75.06 Aligned_cols=78 Identities=17% Similarity=0.220 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|++++|+||+|+||+++++.+... |++|+++++++++++.+. ++ +... ..|.++.+..+++.+.. +++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~----g~~~---~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA----GADY---VINASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH----TCSE---EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CCCE---EecCCCccHHHHHHHHhcCCCc
Confidence 6899999999999999999999999 999999999987766543 22 3222 23666544444333332 479
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|++|+|+|.
T Consensus 242 d~vi~~~g~ 250 (347)
T 1jvb_A 242 DAVIDLNNS 250 (347)
T ss_dssp EEEEESCCC
T ss_pred eEEEECCCC
Confidence 999999984
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=1.3e-05 Score=75.17 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++|+||+|++|.++++.+...|++|+++++++++++.+. ++ +... ..|.++.+..+++.+.. .++|
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~----Ga~~---~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL----GAWE---TIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH----TCSE---EEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CCCE---EEeCCCccHHHHHHHHhCCCCce
Confidence 6899999999999999999999999999999999988776543 22 3222 23555555445554443 3799
Q ss_pred EEEEcCCC
Q 017757 114 VLVVNQGV 121 (366)
Q Consensus 114 ~vi~nAG~ 121 (366)
++|+|+|.
T Consensus 212 vvid~~g~ 219 (325)
T 3jyn_A 212 VVYDGVGQ 219 (325)
T ss_dssp EEEESSCG
T ss_pred EEEECCCh
Confidence 99999984
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.92 E-value=6.5e-05 Score=62.23 Aligned_cols=77 Identities=17% Similarity=0.321 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH-HHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTA-LDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~-~~~~~~id 113 (366)
.++.++|+|+ |.+|+.+++.|.++|++|++++++. ++.+...+.. ...+.++..|.++++.++++ ++ ..|
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----~~~~~~i~gd~~~~~~l~~a~i~---~ad 73 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKAGID---RCR 73 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHHTTT---TCS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----cCCCeEEEcCCCCHHHHHHcChh---hCC
Confidence 4677889986 9999999999999999999999974 4444443322 23467889999999887765 43 789
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
.+|.+.+
T Consensus 74 ~vi~~~~ 80 (153)
T 1id1_A 74 AILALSD 80 (153)
T ss_dssp EEEECSS
T ss_pred EEEEecC
Confidence 9999886
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00021 Score=67.00 Aligned_cols=104 Identities=17% Similarity=0.156 Sum_probs=69.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.+++||||+|.+|..++..|+++| .+|++++++++ +....++.... ..++.. +++.++.++.++ ..|+
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~---gaDv 79 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT---GMDL 79 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT---TCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC---CCCE
Confidence 479999999999999999999998 78999998876 22223333211 112222 234556666555 7899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 156 (366)
||++||...... .+. .+.+..|+.....+++.+.++
T Consensus 80 Vi~~ag~~~~~g---~~r---~dl~~~N~~~~~~i~~~i~~~ 115 (326)
T 1smk_A 80 IIVPAGVPRKPG---MTR---DDLFKINAGIVKTLCEGIAKC 115 (326)
T ss_dssp EEECCCCCCCSS---CCC---SHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCcCCCCC---CCH---HHHHHHHHHHHHHHHHHHHhh
Confidence 999999654221 111 235778888888777777554
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.86 E-value=6.5e-05 Score=60.59 Aligned_cols=75 Identities=16% Similarity=0.302 Sum_probs=56.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+++++|+|+ |.+|..+++.|.+.|++|++++|+++..+...+.. .+..+..|.++.+.+.+. .....|++|
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~--~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDA--GIEDADMYI 74 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHT--TTTTCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc------CcEEEEcCCCCHHHHHHc--CcccCCEEE
Confidence 457899986 99999999999999999999999887665543221 244577899888766543 134789999
Q ss_pred EcCC
Q 017757 117 VNQG 120 (366)
Q Consensus 117 ~nAG 120 (366)
.+.+
T Consensus 75 ~~~~ 78 (140)
T 1lss_A 75 AVTG 78 (140)
T ss_dssp ECCS
T ss_pred EeeC
Confidence 9975
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=4.8e-05 Score=72.43 Aligned_cols=98 Identities=20% Similarity=0.331 Sum_probs=68.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc---hhHHHHHHHHHhhcCCeEEEEEecCCC--HHHHHHHHHh
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG---KKLEEAKQSIQLATGIEVATYSADVRD--FDAVKTALDE 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~Dls~--~~~v~~~~~~ 108 (366)
+++|++++|+|+ |++|..+++.+...|++|++++++. ++.+.+ +++ +.+. + | ++ .+.+.+ . .
T Consensus 178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~----ga~~--v--~-~~~~~~~~~~-~-~ 244 (366)
T 2cdc_A 178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET----KTNY--Y--N-SSNGYDKLKD-S-V 244 (366)
T ss_dssp SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH----TCEE--E--E-CTTCSHHHHH-H-H
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh----CCce--e--c-hHHHHHHHHH-h-C
Confidence 566999999999 9999999999999999999999987 665433 222 3322 2 4 43 233444 2 2
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccCCCCcEEEEecCCc
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI-KAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~-~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+++|++|+++|... .+ +.+++.+++ .|+++.++...
T Consensus 245 -~~~d~vid~~g~~~-------------------------~~~~~~~~~l~~-----~G~iv~~g~~~ 281 (366)
T 2cdc_A 245 -GKFDVIIDATGADV-------------------------NILGNVIPLLGR-----NGVLGLFGFST 281 (366)
T ss_dssp -CCEEEEEECCCCCT-------------------------HHHHHHGGGEEE-----EEEEEECSCCC
T ss_pred -CCCCEEEECCCChH-------------------------HHHHHHHHHHhc-----CCEEEEEecCC
Confidence 67999999998521 12 455556644 57999988743
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.84 E-value=4.8e-05 Score=72.53 Aligned_cols=77 Identities=22% Similarity=0.281 Sum_probs=58.9
Q ss_pred CcCCCCC--EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 32 RIPIKDR--HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 32 ~~~l~gk--~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
..+++|| +|+|.|| |++|+.+++.|++ ..+|.+.+++.++++++. ..+..+.+|++|.+++.++++
T Consensus 9 ~~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~--------~~~~~~~~d~~d~~~l~~~~~-- 76 (365)
T 3abi_A 9 HHHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK--------EFATPLKVDASNFDKLVEVMK-- 76 (365)
T ss_dssp -------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT--------TTSEEEECCTTCHHHHHHHHT--
T ss_pred cccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh--------ccCCcEEEecCCHHHHHHHHh--
Confidence 3445544 6999998 9999999999875 578999999988776653 234567899999999999988
Q ss_pred CCCcEEEEcCCC
Q 017757 110 GPVDVLVVNQGV 121 (366)
Q Consensus 110 ~~id~vi~nAG~ 121 (366)
..|+||++++.
T Consensus 77 -~~DvVi~~~p~ 87 (365)
T 3abi_A 77 -EFELVIGALPG 87 (365)
T ss_dssp -TCSEEEECCCG
T ss_pred -CCCEEEEecCC
Confidence 67999999875
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=4.1e-05 Score=72.90 Aligned_cols=101 Identities=20% Similarity=0.243 Sum_probs=69.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-c-CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-A-GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~-~~id 113 (366)
.|++++|+||+|++|..+++.+...|++|+++++++++++.+.+ + +.+.. .|.++.+ +.+.+.+ . +++|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~----Ga~~~---~~~~~~~-~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L----GCDRP---INYKTEP-VGTVLKQEYPEGVD 233 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T----TCSEE---EETTTSC-HHHHHHHHCTTCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c----CCcEE---EecCChh-HHHHHHHhcCCCCC
Confidence 58999999999999999999999999999999999877665432 2 33321 3444432 2222322 2 4699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++|+|+|. + ..+.+++.+++ .|+++.+++..+
T Consensus 234 ~vid~~g~-----------~---------------~~~~~~~~l~~-----~G~iv~~g~~~~ 265 (362)
T 2c0c_A 234 VVYESVGG-----------A---------------MFDLAVDALAT-----KGRLIVIGFISG 265 (362)
T ss_dssp EEEECSCT-----------H---------------HHHHHHHHEEE-----EEEEEECCCGGG
T ss_pred EEEECCCH-----------H---------------HHHHHHHHHhc-----CCEEEEEeCCCC
Confidence 99999982 0 12345555555 579999988643
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.81 E-value=3.4e-05 Score=71.55 Aligned_cols=79 Identities=14% Similarity=0.214 Sum_probs=58.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++....+ . +.+.+++.+. ...
T Consensus 137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~-------~~~~~~~~~~---~~~ 204 (297)
T 2egg_A 137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-A-------YFSLAEAETR---LAE 204 (297)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-C-------EECHHHHHHT---GGG
T ss_pred CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-c-------eeeHHHHHhh---hcc
Confidence 3578999999997 7999999999999998 899999999888877766532111 1 1122333333 347
Q ss_pred CcEEEEcCCCCC
Q 017757 112 VDVLVVNQGVFV 123 (366)
Q Consensus 112 id~vi~nAG~~~ 123 (366)
.|+||++.+...
T Consensus 205 aDivIn~t~~~~ 216 (297)
T 2egg_A 205 YDIIINTTSVGM 216 (297)
T ss_dssp CSEEEECSCTTC
T ss_pred CCEEEECCCCCC
Confidence 899999998654
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00015 Score=68.41 Aligned_cols=101 Identities=16% Similarity=0.137 Sum_probs=69.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDV 114 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~ 114 (366)
+++++|+||+|++|..++..+...|++|+++++++++++.+. ++ +.+. ..|.++.+..+.+.+.. .++|+
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~----Ga~~---~~~~~~~~~~~~v~~~~~~~g~D~ 236 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI----GAAH---VLNEKAPDFEATLREVMKAEQPRI 236 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH----TCSE---EEETTSTTHHHHHHHHHHHHCCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CCCE---EEECCcHHHHHHHHHHhcCCCCcE
Confidence 489999999999999999999999999999999988876553 22 3322 23544433333333222 37999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
+++|+|.. ..+.+++.+++ .|+++.+++..+
T Consensus 237 vid~~g~~--------------------------~~~~~~~~l~~-----~G~iv~~G~~~~ 267 (349)
T 3pi7_A 237 FLDAVTGP--------------------------LASAIFNAMPK-----RARWIIYGRLDP 267 (349)
T ss_dssp EEESSCHH--------------------------HHHHHHHHSCT-----TCEEEECCCSCC
T ss_pred EEECCCCh--------------------------hHHHHHhhhcC-----CCEEEEEeccCC
Confidence 99999831 01334555554 689999987554
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.79 E-value=6.6e-05 Score=71.17 Aligned_cols=102 Identities=25% Similarity=0.334 Sum_probs=71.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-cCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-AGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~~~id~ 114 (366)
.|++++|+||+|+||.++++.+...|++|+++++++++++.+.+ + +... ..|.++.+..+.+.+. .+++|+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~---~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L----GAKR---GINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H----TCSE---EEETTTSCHHHHHHHHHSSCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c----CCCE---EEeCCchHHHHHHHHHhCCCceE
Confidence 68999999999999999999999999999999999887765533 2 3332 2355554333333222 357999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
+|+|+|.. ..+..++.+++ .|+++.+++..+
T Consensus 239 vid~~g~~--------------------------~~~~~~~~l~~-----~G~iv~~g~~~~ 269 (353)
T 4dup_A 239 ILDMIGAA--------------------------YFERNIASLAK-----DGCLSIIAFLGG 269 (353)
T ss_dssp EEESCCGG--------------------------GHHHHHHTEEE-----EEEEEECCCTTC
T ss_pred EEECCCHH--------------------------HHHHHHHHhcc-----CCEEEEEEecCC
Confidence 99999831 12334555554 579999987554
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00011 Score=71.84 Aligned_cols=42 Identities=21% Similarity=0.242 Sum_probs=38.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA 77 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~ 77 (366)
.|++++|+||+|+||.+++..+...|++|+++++++++++.+
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~ 261 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV 261 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999999988776654
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.75 E-value=5.6e-05 Score=71.21 Aligned_cols=101 Identities=24% Similarity=0.254 Sum_probs=69.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|++++|+|+ |++|..+++.+...|++|+++++++++++.+. ++ +.+. ..|.++.+-.+++.+..+++|++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga~~---~~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL----GADL---VVNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT----TCSE---EECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC----CCCE---EecCCCccHHHHHHHHhCCCCEE
Confidence 5889999999 88999999999999999999999988776543 22 3322 24666533222222222579999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
|+++|.. + ..+..++.+++ .|+++.+++..
T Consensus 235 id~~g~~----------~---------------~~~~~~~~l~~-----~G~~v~~g~~~ 264 (339)
T 1rjw_A 235 VVTAVSK----------P---------------AFQSAYNSIRR-----GGACVLVGLPP 264 (339)
T ss_dssp EESSCCH----------H---------------HHHHHHHHEEE-----EEEEEECCCCS
T ss_pred EECCCCH----------H---------------HHHHHHHHhhc-----CCEEEEecccC
Confidence 9999831 1 23455566655 57999988754
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00013 Score=69.40 Aligned_cols=78 Identities=24% Similarity=0.235 Sum_probs=60.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.+++++++|+|+ |++|+++++.+...|++|++++|++++++.+.+.... .+. ++..+.+++.+.+. ..|
T Consensus 164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~----~~~---~~~~~~~~~~~~~~---~~D 232 (361)
T 1pjc_A 164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RVE---LLYSNSAEIETAVA---EAD 232 (361)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GSE---EEECCHHHHHHHHH---TCS
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc----eeE---eeeCCHHHHHHHHc---CCC
Confidence 377899999998 9999999999999999999999999887776544321 221 22345566665555 689
Q ss_pred EEEEcCCCC
Q 017757 114 VLVVNQGVF 122 (366)
Q Consensus 114 ~vi~nAG~~ 122 (366)
++|++++..
T Consensus 233 vVI~~~~~~ 241 (361)
T 1pjc_A 233 LLIGAVLVP 241 (361)
T ss_dssp EEEECCCCT
T ss_pred EEEECCCcC
Confidence 999999864
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=6.6e-05 Score=71.57 Aligned_cols=99 Identities=22% Similarity=0.328 Sum_probs=71.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|++++|+|+ |++|..+++.+...|++|+++++++++.+.+.+++ +.+. ..|..+.+.++++. +.+|++
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l----Ga~~---v~~~~~~~~~~~~~---~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF----GADS---FLVSRDQEQMQAAA---GTLDGI 255 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS----CCSE---EEETTCHHHHHHTT---TCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----CCce---EEeccCHHHHHHhh---CCCCEE
Confidence 6899999996 99999999999999999999999988876654333 3322 24666766555443 479999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
|.++|... .++..++.+++ .|+++.+++..
T Consensus 256 id~~g~~~-------------------------~~~~~~~~l~~-----~G~iv~~g~~~ 285 (366)
T 1yqd_A 256 IDTVSAVH-------------------------PLLPLFGLLKS-----HGKLILVGAPE 285 (366)
T ss_dssp EECCSSCC-------------------------CSHHHHHHEEE-----EEEEEECCCCS
T ss_pred EECCCcHH-------------------------HHHHHHHHHhc-----CCEEEEEccCC
Confidence 99998531 12244555554 57999998754
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.70 E-value=7.1e-05 Score=70.48 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|++++|+||+++||..++..+...|++|+++++++++++.+.+ + +.+. ..|.++.+..+++.+.. .++|
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l----ga~~---~~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L----GAAY---VIDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H----TCSE---EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C----CCcE---EEeCCcccHHHHHHHHhCCCCCc
Confidence 68999999999999999999998899999999999988765543 2 3332 23555544444444432 3799
Q ss_pred EEEEcCCC
Q 017757 114 VLVVNQGV 121 (366)
Q Consensus 114 ~vi~nAG~ 121 (366)
++|+|+|.
T Consensus 216 vvid~~g~ 223 (340)
T 3gms_A 216 AAIDSIGG 223 (340)
T ss_dssp EEEESSCH
T ss_pred EEEECCCC
Confidence 99999983
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=6.3e-05 Score=62.48 Aligned_cols=83 Identities=16% Similarity=0.249 Sum_probs=58.8
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
+.++.+..+++++|+|+ |.+|..+++.|.+.|++|++++|++++.+.+.+ . .....+..|.++.+.+.+. .
T Consensus 11 ~~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----~--~g~~~~~~d~~~~~~l~~~--~ 81 (155)
T 2g1u_A 11 HHMSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----E--FSGFTVVGDAAEFETLKEC--G 81 (155)
T ss_dssp ------CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----T--CCSEEEESCTTSHHHHHTT--T
T ss_pred hhhhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----c--CCCcEEEecCCCHHHHHHc--C
Confidence 34566778899999996 999999999999999999999999877543211 1 1234567888887665543 1
Q ss_pred cCCCcEEEEcCC
Q 017757 109 AGPVDVLVVNQG 120 (366)
Q Consensus 109 ~~~id~vi~nAG 120 (366)
....|++|.+.+
T Consensus 82 ~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 82 MEKADMVFAFTN 93 (155)
T ss_dssp GGGCSEEEECSS
T ss_pred cccCCEEEEEeC
Confidence 346899999987
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0002 Score=65.77 Aligned_cols=76 Identities=14% Similarity=0.253 Sum_probs=58.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++.... .+.....+ + +. ..
T Consensus 122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~~~~~~~~--~---l~------~~ 187 (281)
T 3o8q_A 122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--EVKAQAFE--Q---LK------QS 187 (281)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--CEEEEEGG--G---CC------SC
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--CeeEeeHH--H---hc------CC
Confidence 5689999999997 7999999999999996 89999999999988888876532 23333221 1 10 36
Q ss_pred CcEEEEcCCCC
Q 017757 112 VDVLVVNQGVF 122 (366)
Q Consensus 112 id~vi~nAG~~ 122 (366)
.|+|||+....
T Consensus 188 aDiIInaTp~g 198 (281)
T 3o8q_A 188 YDVIINSTSAS 198 (281)
T ss_dssp EEEEEECSCCC
T ss_pred CCEEEEcCcCC
Confidence 89999997653
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00016 Score=69.23 Aligned_cols=107 Identities=15% Similarity=0.126 Sum_probs=76.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.+.|++++|+|+ |+||+++++.+...|++|++++|+.++++.+.+.+ +..+ ..|.++.+++.+++. ..|
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----g~~~---~~~~~~~~~l~~~l~---~aD 233 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----CGRI---HTRYSSAYELEGAVK---RAD 233 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTSS---EEEECCHHHHHHHHH---HCS
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----CCee---EeccCCHHHHHHHHc---CCC
Confidence 588999999998 99999999999999999999999988776654433 3232 234556677777766 579
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++|++++...... +..+.+..++.|++ .+.||++++..
T Consensus 234 vVi~~~~~p~~~t-------------------~~li~~~~l~~mk~-----g~~iV~va~~~ 271 (377)
T 2vhw_A 234 LVIGAVLVPGAKA-------------------PKLVSNSLVAHMKP-----GAVLVDIAIDQ 271 (377)
T ss_dssp EEEECCCCTTSCC-------------------CCCBCHHHHTTSCT-----TCEEEEGGGGT
T ss_pred EEEECCCcCCCCC-------------------cceecHHHHhcCCC-----CcEEEEEecCC
Confidence 9999988543210 01123445555554 57899998643
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00023 Score=67.13 Aligned_cols=76 Identities=25% Similarity=0.350 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-c--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-A--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~--~~i 112 (366)
.|+++||+||+|+||.+++..+...|++|+++++++++.+.+.+ + +.+.. .|.. +++.+.+.+ . .++
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~----ga~~v---~~~~--~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V----GADIV---LPLE--EGWAKAVREATGGAGV 228 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H----TCSEE---EESS--TTHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c----CCcEE---ecCc--hhHHHHHHHHhCCCCc
Confidence 58999999999999999999999999999999999888765433 2 33221 2433 233333332 2 269
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|++|+|+|.
T Consensus 229 Dvvid~~g~ 237 (342)
T 4eye_A 229 DMVVDPIGG 237 (342)
T ss_dssp EEEEESCC-
T ss_pred eEEEECCch
Confidence 999999984
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00023 Score=64.97 Aligned_cols=76 Identities=14% Similarity=0.219 Sum_probs=57.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
..++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++.. ..+.... ..+ +.. .
T Consensus 115 ~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~---~~~~~~~--~~~---l~~-----~ 180 (272)
T 3pwz_A 115 GEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH---SRLRISR--YEA---LEG-----Q 180 (272)
T ss_dssp CCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC---TTEEEEC--SGG---GTT-----C
T ss_pred CCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc---CCeeEee--HHH---hcc-----c
Confidence 45789999999997 7999999999999996 899999999998888877653 1233332 211 111 4
Q ss_pred CCcEEEEcCCC
Q 017757 111 PVDVLVVNQGV 121 (366)
Q Consensus 111 ~id~vi~nAG~ 121 (366)
..|+|||+...
T Consensus 181 ~~DivInaTp~ 191 (272)
T 3pwz_A 181 SFDIVVNATSA 191 (272)
T ss_dssp CCSEEEECSSG
T ss_pred CCCEEEECCCC
Confidence 68999999754
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00011 Score=62.57 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=60.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++.+++++|.| .|.+|..+++.|.+. |++|+++++++++.+.+.+ . + +..+..|.++++.++++ .....
T Consensus 35 ~~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~-g--~~~~~gd~~~~~~l~~~-~~~~~ 105 (183)
T 3c85_A 35 INPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E-G--RNVISGDATDPDFWERI-LDTGH 105 (183)
T ss_dssp BCCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T-T--CCEEECCTTCHHHHHTB-CSCCC
T ss_pred cCCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C-C--CCEEEcCCCCHHHHHhc-cCCCC
Confidence 356677889998 599999999999999 9999999999877665432 1 2 34567899998766543 01347
Q ss_pred CcEEEEcCC
Q 017757 112 VDVLVVNQG 120 (366)
Q Consensus 112 id~vi~nAG 120 (366)
.|++|.+.+
T Consensus 106 ad~vi~~~~ 114 (183)
T 3c85_A 106 VKLVLLAMP 114 (183)
T ss_dssp CCEEEECCS
T ss_pred CCEEEEeCC
Confidence 899999876
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00024 Score=64.00 Aligned_cols=83 Identities=22% Similarity=0.338 Sum_probs=66.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEEE
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVAT 91 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~~ 91 (366)
.++++++++|.|+ ||+|.++++.|+..|. ++++++++. .+.+.+++.+.... ..++..
T Consensus 27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~ 105 (249)
T 1jw9_B 27 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP 105 (249)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEE
Confidence 3578899999996 8999999999999997 799999997 78888888887653 346777
Q ss_pred EEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 92 YSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 92 ~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
+..++++ +.++++++ ..|+||.+..
T Consensus 106 ~~~~~~~-~~~~~~~~---~~DvVi~~~d 130 (249)
T 1jw9_B 106 VNALLDD-AELAALIA---EHDLVLDCTD 130 (249)
T ss_dssp ECSCCCH-HHHHHHHH---TSSEEEECCS
T ss_pred EeccCCH-hHHHHHHh---CCCEEEEeCC
Confidence 7766763 55666666 6899999875
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00034 Score=68.65 Aligned_cols=105 Identities=22% Similarity=0.283 Sum_probs=70.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEE--ec--------CCCHHHHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS--AD--------VRDFDAVKTA 105 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~--~D--------ls~~~~v~~~ 105 (366)
.|++++|+||+|++|...+..+...|++|+++++++++++.+. ++ |.....-. .| .++.++++++
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~l----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AM----GAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH----TCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hh----CCcEEEecCcCcccccccccccchHHHHHH
Confidence 6899999999999999999999999999999999887766543 23 33222111 11 2344444333
Q ss_pred HHh----c--CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 106 LDE----A--GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 106 ~~~----~--~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
.++ . .++|++|.++|. + .++.+++.+++ .|+++.+++..+
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G~-----------~---------------~~~~~~~~l~~-----~G~iv~~G~~~~ 348 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPGR-----------E---------------TFGASVFVTRK-----GGTITTCASTSG 348 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSCH-----------H---------------HHHHHHHHEEE-----EEEEEESCCTTC
T ss_pred HHHHHHHhCCCCCcEEEEcCCc-----------h---------------hHHHHHHHhhC-----CcEEEEEecCCC
Confidence 322 1 379999999982 1 12344555555 589999987654
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0005 Score=64.08 Aligned_cols=105 Identities=26% Similarity=0.196 Sum_probs=67.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEec--CchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILAR--SGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r--~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+++||||+|.+|..++..|+.+|. ++.++++ +.++++....++... .+.++.....| +++.+ .+..
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~---al~g 74 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR---IIDE 74 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG---GGTT
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH---HhCC
Confidence 589999999999999999999884 6888998 665554433333321 11222222211 11122 2347
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 156 (366)
.|+|||+||..... ..+. ...++.|+.....+++++.++
T Consensus 75 aD~Vi~~Ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~ 113 (313)
T 1hye_A 75 SDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIAEI 113 (313)
T ss_dssp CSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHHh
Confidence 99999999965321 1232 345889999888888888654
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00058 Score=55.57 Aligned_cols=77 Identities=13% Similarity=0.226 Sum_probs=59.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.++++ .++|.|+ |.+|..+++.|.++|++|+++++++++.+.+.+ ..+..+..|.++++.++++ .....
T Consensus 4 ~~~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-------~g~~~i~gd~~~~~~l~~a--~i~~a 72 (140)
T 3fwz_A 4 VDICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-------RGVRAVLGNAANEEIMQLA--HLECA 72 (140)
T ss_dssp CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------TTCEEEESCTTSHHHHHHT--TGGGC
T ss_pred ccCCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-------cCCCEEECCCCCHHHHHhc--CcccC
Confidence 34444 5677785 889999999999999999999999987765543 1345688999999877664 12368
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|.+|.+.+
T Consensus 73 d~vi~~~~ 80 (140)
T 3fwz_A 73 KWLILTIP 80 (140)
T ss_dssp SEEEECCS
T ss_pred CEEEEECC
Confidence 99998876
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00033 Score=66.07 Aligned_cols=101 Identities=25% Similarity=0.318 Sum_probs=69.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|++++|+|+ |++|..+++.+...|+ +|+++++++++++.+. ++ +.+. ..|..+.+-.+++.+.. ..+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~----Ga~~---~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV----GADY---VINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH----TCSE---EECTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----CCCE---EECCCCcCHHHHHHHHcCCCCC
Confidence 8999999999 9999999999999999 8999999987765443 22 3221 23555433333333322 269
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
|++|.++|. . ..++.+++.+++ .|+++.+++..
T Consensus 238 D~vid~~g~----------~---------------~~~~~~~~~l~~-----~G~iv~~g~~~ 270 (348)
T 2d8a_A 238 DVFLEFSGA----------P---------------KALEQGLQAVTP-----AGRVSLLGLYP 270 (348)
T ss_dssp EEEEECSCC----------H---------------HHHHHHHHHEEE-----EEEEEECCCCS
T ss_pred CEEEECCCC----------H---------------HHHHHHHHHHhc-----CCEEEEEccCC
Confidence 999999983 1 123455566655 57999998754
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.47 E-value=8.5e-05 Score=60.88 Aligned_cols=71 Identities=11% Similarity=0.207 Sum_probs=54.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+++++|.|+ |++|+.+++.|.+.|++|++++|+.++.++..+++. ..+. +..+ +++.++ ..|++|
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~----~~~~----~~~~---~~~~~~---~~Divi 85 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE----YEYV----LIND---IDSLIK---NNDVII 85 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT----CEEE----ECSC---HHHHHH---TCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC----CceE----eecC---HHHHhc---CCCEEE
Confidence 899999996 999999999999999999999999988777666543 2221 2233 334444 589999
Q ss_pred EcCCCC
Q 017757 117 VNQGVF 122 (366)
Q Consensus 117 ~nAG~~ 122 (366)
++.+..
T Consensus 86 ~at~~~ 91 (144)
T 3oj0_A 86 TATSSK 91 (144)
T ss_dssp ECSCCS
T ss_pred EeCCCC
Confidence 998754
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0011 Score=62.73 Aligned_cols=80 Identities=26% Similarity=0.212 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA---GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~---~~ 111 (366)
.|+++||+|+ |++|...+..+...|++ |+++++++++++.+.+ + ...+..+..|-.+.+++.+.+.+. .+
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l----~~~~~~~~~~~~~~~~~~~~v~~~t~g~g 252 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I----CPEVVTHKVERLSAEESAKKIVESFGGIE 252 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H----CTTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----chhcccccccccchHHHHHHHHHHhCCCC
Confidence 5889999998 99999999888889998 9999999887765443 2 334555556656666665555442 37
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 253 ~Dvvid~~g~ 262 (363)
T 3m6i_A 253 PAVALECTGV 262 (363)
T ss_dssp CSEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0014 Score=60.83 Aligned_cols=101 Identities=12% Similarity=0.057 Sum_probs=66.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEec--CchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILAR--SGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r--~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+++||||+|.+|..++..|+.+|. +++++++ +.++++....++.... ..++.... | + .+.+...
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~-------~~a~~~a 71 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G-------YEDTAGS 71 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C-------GGGGTTC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C-------HHHhCCC
Confidence 689999999999999999999875 6889999 7766554444443321 22232222 2 2 1224479
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 155 (366)
|+|||+||..... ..+.. +.+..|+.....+++.+.+
T Consensus 72 DvVi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i~~ 108 (303)
T 1o6z_A 72 DVVVITAGIPRQP---GQTRI---DLAGDNAPIMEDIQSSLDE 108 (303)
T ss_dssp SEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHH
Confidence 9999999964321 12333 3578888877777766643
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00033 Score=64.70 Aligned_cols=73 Identities=22% Similarity=0.266 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~id~ 114 (366)
.|++++|+||+|++|..++..+...|++|+++++++++.+.+. ++ +.+. ..|..+ .+..++ .+++|+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~----ga~~---~~~~~~~~~~~~~----~~~~d~ 192 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL----GAEE---AATYAEVPERAKA----WGGLDL 192 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT----TCSE---EEEGGGHHHHHHH----TTSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc----CCCE---EEECCcchhHHHH----hcCceE
Confidence 5899999999999999999999999999999999988766543 22 3222 235555 332222 257999
Q ss_pred EEEcCCC
Q 017757 115 LVVNQGV 121 (366)
Q Consensus 115 vi~nAG~ 121 (366)
+|+ +|.
T Consensus 193 vid-~g~ 198 (302)
T 1iz0_A 193 VLE-VRG 198 (302)
T ss_dssp EEE-CSC
T ss_pred EEE-CCH
Confidence 999 884
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0011 Score=61.04 Aligned_cols=88 Identities=16% Similarity=0.271 Sum_probs=71.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc------------------hhHHHHHHHHHhhc-CCeEEE
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG------------------KKLEEAKQSIQLAT-GIEVAT 91 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~------------------~~~~~~~~~l~~~~-~~~v~~ 91 (366)
..++++++|+|.|+ ||+|.++++.|+..|. ++.++|.+. .+.+.+++.+++.. ..++..
T Consensus 31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~ 109 (292)
T 3h8v_A 31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV 109 (292)
T ss_dssp -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence 46789999999995 8999999999999995 699999876 67777777777654 457888
Q ss_pred EEecCCCHHHHHHHHHhc--------CCCcEEEEcCC
Q 017757 92 YSADVRDFDAVKTALDEA--------GPVDVLVVNQG 120 (366)
Q Consensus 92 ~~~Dls~~~~v~~~~~~~--------~~id~vi~nAG 120 (366)
+..++++.+.++++++.. ...|+||.+..
T Consensus 110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D 146 (292)
T 3h8v_A 110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD 146 (292)
T ss_dssp ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence 888999888888877532 47899998774
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0015 Score=61.56 Aligned_cols=77 Identities=27% Similarity=0.292 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC----HHHHHHHHHh--c
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD----FDAVKTALDE--A 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~----~~~v~~~~~~--~ 109 (366)
.|++++|+|+ |++|..++..+...|++|+++++++++++.+. ++ +.+. ..|.++ .+.+.+.... -
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga~~---~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC----GADV---TLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT----TCSE---EEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh----CCCE---EEcCcccccHHHHHHHHhccccC
Confidence 5899999997 89999999988889999999999887766443 22 3332 124333 3344443321 2
Q ss_pred CCCcEEEEcCCC
Q 017757 110 GPVDVLVVNQGV 121 (366)
Q Consensus 110 ~~id~vi~nAG~ 121 (366)
+++|++|.++|.
T Consensus 239 ~g~D~vid~~g~ 250 (352)
T 1e3j_A 239 DLPNVTIDCSGN 250 (352)
T ss_dssp SCCSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 469999999983
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00057 Score=64.39 Aligned_cols=75 Identities=19% Similarity=0.340 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~id 113 (366)
.|++++|+||+|++|..++..+...|++|+++++++++++.+.+ + +.+.. .|..+ + +.+.+.+ .+.+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~v---i~~~~-~-~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M----GADIV---LNHKE-S-LLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H----TCSEE---ECTTS-C-HHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c----CCcEE---EECCc-c-HHHHHHHhCCCCcc
Confidence 68999999999999999999999999999999998877665443 2 32221 23332 1 2222222 24799
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++++|+|
T Consensus 220 vv~d~~g 226 (346)
T 3fbg_A 220 YVFCTFN 226 (346)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00052 Score=64.72 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=73.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
.++++++.|+|++|.+|..+|..++.+|. +|+++|++.++++....++.... ..++.+ . .+..+.++
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t------~d~~~al~-- 75 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T------SDIKEALT-- 75 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E------SCHHHHHT--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c------CCHHHHhC--
Confidence 35678999999999999999999999984 79999999887776655565431 112221 1 12223333
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcE-EEEecCC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPAS-IALMSSQ 174 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~-iv~vsS~ 174 (366)
..|++|.+||..... ..+ -.+.++.|..-...+.+. +.+... .+. ++.+|.-
T Consensus 76 -dADvVvitaG~p~kp---G~~---R~dLl~~N~~I~~~i~~~----i~~~~p--~a~~vlvvsNP 128 (343)
T 3fi9_A 76 -DAKYIVSSGGAPRKE---GMT---REDLLKGNAEIAAQLGKD----IKSYCP--DCKHVIIIFNP 128 (343)
T ss_dssp -TEEEEEECCC----------C---HHHHHHHHHHHHHHHHHH----HHHHCT--TCCEEEECSSS
T ss_pred -CCCEEEEccCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHHhcc--CcEEEEEecCc
Confidence 689999999964321 112 334566666555444444 444331 353 6666653
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00013 Score=67.68 Aligned_cols=38 Identities=29% Similarity=0.383 Sum_probs=32.9
Q ss_pred CCCCCE-EEEEcCCC-----------------h-hHHHHHHHHHHCCCeEEEEecCc
Q 017757 34 PIKDRH-VFITGGSS-----------------G-IGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 34 ~l~gk~-vLITGas~-----------------g-IG~aia~~L~~~G~~V~l~~r~~ 71 (366)
+++||+ +|||+|.. | .|.++|++++++|++|+++++..
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 578888 99996654 4 99999999999999999998854
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00094 Score=58.51 Aligned_cols=73 Identities=22% Similarity=0.269 Sum_probs=58.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++|+|+ |.+|..+++.|.++|++|+++++++++.++..+.. .+..+..|.++++.++++ .....|++|.+
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~------~~~~i~gd~~~~~~l~~a--~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL------KATIIHGDGSHKEILRDA--EVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS------SSEEEESCTTSHHHHHHH--TCCTTCEEEEC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc------CCeEEEcCCCCHHHHHhc--CcccCCEEEEe
Confidence 4889996 99999999999999999999999988776654322 345789999999887765 13478999987
Q ss_pred CC
Q 017757 119 QG 120 (366)
Q Consensus 119 AG 120 (366)
.+
T Consensus 73 ~~ 74 (218)
T 3l4b_C 73 TP 74 (218)
T ss_dssp CS
T ss_pred cC
Confidence 75
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0015 Score=61.47 Aligned_cols=74 Identities=26% Similarity=0.375 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
.|+++||+||+|++|..++..+...|++|+++ +++++++.+ +++ +... .| .+.+..+.+.+.. .++|
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l----Ga~~----i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL----GATP----ID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH----TSEE----EE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc----CCCE----ec-cCCCHHHHHHHHhcCCCce
Confidence 68999999999999999999999999999999 777665543 222 4333 34 3332222222222 3799
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++|.|+|
T Consensus 219 ~vid~~g 225 (343)
T 3gaz_A 219 LVYDTLG 225 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00082 Score=64.05 Aligned_cols=76 Identities=21% Similarity=0.275 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|++++|+||+|++|..++..+...|++|++++ ++++.+.+ +++ +.+. ..|.++.+..+++ .+.+++|++
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l----Ga~~---v~~~~~~~~~~~~-~~~~g~D~v 252 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL----GADD---VIDYKSGSVEEQL-KSLKPFDFI 252 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT----TCSE---EEETTSSCHHHHH-HTSCCBSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc----CCCE---EEECCchHHHHHH-hhcCCCCEE
Confidence 689999999999999999998888999999888 45554433 332 3332 2355543333333 334679999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
|.++|.
T Consensus 253 id~~g~ 258 (375)
T 2vn8_A 253 LDNVGG 258 (375)
T ss_dssp EESSCT
T ss_pred EECCCC
Confidence 999984
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0021 Score=58.44 Aligned_cols=66 Identities=23% Similarity=0.327 Sum_probs=51.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+|+++|.|+ ||.|++++..|++.|.+|+++.|+.++.+++. ++. . ... +..+ ....|++|
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~----~--~~~--~~~~----------l~~~DiVI 177 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG----C--DCF--MEPP----------KSAFDLII 177 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT----C--EEE--SSCC----------SSCCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC----C--eEe--cHHH----------hccCCEEE
Confidence 899999996 99999999999999999999999999988776 442 1 111 2222 11689999
Q ss_pred EcCCCC
Q 017757 117 VNQGVF 122 (366)
Q Consensus 117 ~nAG~~ 122 (366)
|+....
T Consensus 178 naTp~G 183 (269)
T 3phh_A 178 NATSAS 183 (269)
T ss_dssp ECCTTC
T ss_pred EcccCC
Confidence 997654
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0012 Score=63.76 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=56.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.++..+++ +..+ .+. +++.+.+. ..
T Consensus 164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----g~~~----~~~---~~l~~~l~---~a 228 (404)
T 1gpj_A 164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----GGEA----VRF---DELVDHLA---RS 228 (404)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----TCEE----CCG---GGHHHHHH---TC
T ss_pred cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----CCce----ecH---HhHHHHhc---CC
Confidence 478999999997 9999999999999998 8999999988776655544 3221 222 23444444 68
Q ss_pred cEEEEcCCCC
Q 017757 113 DVLVVNQGVF 122 (366)
Q Consensus 113 d~vi~nAG~~ 122 (366)
|+||.+.|..
T Consensus 229 DvVi~at~~~ 238 (404)
T 1gpj_A 229 DVVVSATAAP 238 (404)
T ss_dssp SEEEECCSSS
T ss_pred CEEEEccCCC
Confidence 9999998743
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0034 Score=59.47 Aligned_cols=100 Identities=19% Similarity=0.255 Sum_probs=67.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-c--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-A--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~--~~i 112 (366)
.|+++||+| +|++|...+..+...|++|+++++++++++.+ +++ +.+.. .| .+.+++.+.+.+ . .++
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l----Ga~~v---i~-~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL----GADHG---IN-RLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH----TCSEE---EE-TTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc----CCCEE---Ec-CCcccHHHHHHHHhCCCCc
Confidence 589999999 89999999999988999999999998876654 223 33222 24 332333333322 1 379
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
|++|.++|.. . .+.+++.+++ .|+++.++...+
T Consensus 259 D~vid~~g~~--------~------------------~~~~~~~l~~-----~G~iv~~G~~~~ 291 (363)
T 3uog_A 259 DHILEIAGGA--------G------------------LGQSLKAVAP-----DGRISVIGVLEG 291 (363)
T ss_dssp EEEEEETTSS--------C------------------HHHHHHHEEE-----EEEEEEECCCSS
T ss_pred eEEEECCChH--------H------------------HHHHHHHhhc-----CCEEEEEecCCC
Confidence 9999999821 1 2344555555 589999987554
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0023 Score=59.95 Aligned_cols=76 Identities=29% Similarity=0.363 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|+++||+|+ |++|...+..+...|++|+.+++++++.+.+. ++ +.+.. .|..+.+..+.+.+..+++|++
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga~~~---i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RL----GAEVA---VNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT----TCSEE---EETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-Hc----CCCEE---EeCCCcCHHHHHHHhCCCCCEE
Confidence 5899999997 89999999988889999999999988766442 22 33322 3555544444444445689999
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
|.++|
T Consensus 237 id~~g 241 (340)
T 3s2e_A 237 LVTAV 241 (340)
T ss_dssp EESSC
T ss_pred EEeCC
Confidence 99987
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00021 Score=65.48 Aligned_cols=72 Identities=14% Similarity=0.261 Sum_probs=52.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+ ++... ..+++.+.+ ..
T Consensus 113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~--------~~~~~-----~~~~~~~~~---~~ 175 (277)
T 3don_A 113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL--------NINKI-----NLSHAESHL---DE 175 (277)
T ss_dssp TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS--------CCEEE-----CHHHHHHTG---GG
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--------hcccc-----cHhhHHHHh---cC
Confidence 4578999999997 7999999999999999 89999999887654432 11111 233444433 36
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
.|+|||+...
T Consensus 176 aDiVInaTp~ 185 (277)
T 3don_A 176 FDIIINTTPA 185 (277)
T ss_dssp CSEEEECCC-
T ss_pred CCEEEECccC
Confidence 7999999754
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00071 Score=58.84 Aligned_cols=71 Identities=21% Similarity=0.311 Sum_probs=50.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
+++|+||+|.+|.++++.|++.|++|++++|++++.++..+.+..... .++. . +++.+.++ ..|++|+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~---~~D~Vi~ 70 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT--G------MKNEDAAE---ACDIAVL 70 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE--E------EEHHHHHH---HCSEEEE
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC--h------hhHHHHHh---cCCEEEE
Confidence 578999999999999999999999999999998877666554321101 1222 1 12334444 4799999
Q ss_pred cCC
Q 017757 118 NQG 120 (366)
Q Consensus 118 nAG 120 (366)
+..
T Consensus 71 ~~~ 73 (212)
T 1jay_A 71 TIP 73 (212)
T ss_dssp CSC
T ss_pred eCC
Confidence 874
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.004 Score=57.93 Aligned_cols=117 Identities=20% Similarity=0.214 Sum_probs=70.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++.|+||+|.+|..++..|+++| .+|+++|+++ .+....++.... ..++.... ..++.++.++ ..|++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~---~aDvV 72 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK---GCDVV 72 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT---TCSEE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC---CCCEE
Confidence 58999999999999999999988 6899999987 333333443321 11222221 0123444444 78999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
|++||...... .+.. +.+..|+.....+.+.+.++ .. .+.++++|--..
T Consensus 73 vi~ag~~~~~g---~~r~---dl~~~n~~i~~~i~~~i~~~----~p--~a~viv~sNPv~ 121 (314)
T 1mld_A 73 VIPAGVPRKPG---MTRD---DLFNTNATIVATLTAACAQH----CP--DAMICIISNPVN 121 (314)
T ss_dssp EECCSCCCCTT---CCGG---GGHHHHHHHHHHHHHHHHHH----CT--TSEEEECSSCHH
T ss_pred EECCCcCCCCC---CcHH---HHHHHHHHHHHHHHHHHHhh----CC--CeEEEEECCCcc
Confidence 99999754321 1211 23566666555555555433 21 467888765433
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0054 Score=57.36 Aligned_cols=117 Identities=9% Similarity=0.093 Sum_probs=74.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....+++... +..+.....| .+.+.
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~----------~~a~~ 72 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT----------YEDCK 72 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC----------GGGGT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc----------HHHhC
Confidence 4568999996 9999999999999987 89999999888777665665431 1233333222 12344
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
..|++|.+||..... ..+. .+.++.|..-.. .+.+.+.+... .+.++.+|.-.
T Consensus 73 ~aDvVvi~ag~p~kp---G~~R---~dL~~~N~~Iv~----~i~~~I~~~~p--~a~vlvvtNPv 125 (326)
T 3pqe_A 73 DADIVCICAGANQKP---GETR---LELVEKNLKIFK----GIVSEVMASGF--DGIFLVATNPV 125 (326)
T ss_dssp TCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHH----HHHHHHHHTTC--CSEEEECSSSH
T ss_pred CCCEEEEecccCCCC---CccH---HHHHHHHHHHHH----HHHHHHHHhcC--CeEEEEcCChH
Confidence 789999999964321 1232 234566665444 44444444331 46777777643
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0022 Score=60.66 Aligned_cols=81 Identities=15% Similarity=0.164 Sum_probs=52.2
Q ss_pred CC-CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC------HHHHHHHHH-
Q 017757 36 KD-RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD------FDAVKTALD- 107 (366)
Q Consensus 36 ~g-k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~------~~~v~~~~~- 107 (366)
.| ++++|+||+|++|...+..+...|++|+++.++.++.++..+.+.+. |.+..+ |-.+ .+.+.++..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l-Ga~~vi---~~~~~~~~~~~~~i~~~t~~ 241 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL-GATQVI---TEDQNNSREFGPTIKEWIKQ 241 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH-TCSEEE---EHHHHHCGGGHHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc-CCeEEE---ecCccchHHHHHHHHHHhhc
Confidence 47 89999999999999998888888999999988776533332333322 333211 2211 123333320
Q ss_pred hcCCCcEEEEcCC
Q 017757 108 EAGPVDVLVVNQG 120 (366)
Q Consensus 108 ~~~~id~vi~nAG 120 (366)
.-+++|++|.++|
T Consensus 242 ~~~g~Dvvid~~G 254 (364)
T 1gu7_A 242 SGGEAKLALNCVG 254 (364)
T ss_dssp HTCCEEEEEESSC
T ss_pred cCCCceEEEECCC
Confidence 1247999999998
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0026 Score=60.73 Aligned_cols=77 Identities=25% Similarity=0.382 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCC--CHHHHHHHHHhc--C
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR--DFDAVKTALDEA--G 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls--~~~~v~~~~~~~--~ 110 (366)
.|+++||+| +|++|..++..+...| ++|+++++++++++.+. ++ +.+. ..|.. +.+++.+.+.+. +
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~---vi~~~~~~~~~~~~~v~~~~~g 265 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI----GADL---TLNRRETSVEERRKAIMDITHG 265 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT----TCSE---EEETTTSCHHHHHHHHHHHTTT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc----CCcE---EEeccccCcchHHHHHHHHhCC
Confidence 589999999 8999999999888899 59999999987766543 22 3322 12433 244444444332 2
Q ss_pred -CCcEEEEcCCC
Q 017757 111 -PVDVLVVNQGV 121 (366)
Q Consensus 111 -~id~vi~nAG~ 121 (366)
++|++|.++|.
T Consensus 266 ~g~Dvvid~~g~ 277 (380)
T 1vj0_A 266 RGADFILEATGD 277 (380)
T ss_dssp SCEEEEEECSSC
T ss_pred CCCcEEEECCCC
Confidence 69999999984
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0078 Score=57.84 Aligned_cols=77 Identities=26% Similarity=0.317 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|.++||+|+ |++|...+..+...|+ +|+++++++++++.+ +++ |.+. ..|-.+.+-.+++.+.. .++
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l----Ga~~---vi~~~~~~~~~~i~~~t~g~g~ 283 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL----GADH---VIDPTKENFVEAVLDYTNGLGA 283 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH----TCSE---EECTTTSCHHHHHHHHTTTCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc----CCCE---EEcCCCCCHHHHHHHHhCCCCC
Confidence 5899999998 9999999988888999 899999988776544 233 3322 23444443333333332 369
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|++|.++|.
T Consensus 284 D~vid~~g~ 292 (404)
T 3ip1_A 284 KLFLEATGV 292 (404)
T ss_dssp SEEEECSSC
T ss_pred CEEEECCCC
Confidence 999999983
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0019 Score=60.75 Aligned_cols=99 Identities=14% Similarity=0.166 Sum_probs=66.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhcCCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKE--GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEAGPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~i 112 (366)
.|+++||+|+ |++|...+..+... |++|+++++++++.+.+. ++ +.+.. .|..+ .+.++++-+ -.++
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga~~v---i~~~~~~~~~~~~~~-g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL----GADYV---SEMKDAESLINKLTD-GLGA 239 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH----TCSEE---ECHHHHHHHHHHHHT-TCCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh----CCCEE---eccccchHHHHHhhc-CCCc
Confidence 7899999999 89999999888888 999999999888766543 22 32221 23333 232333222 2279
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
|++|.++|.. ...+.+++.+++ .|+++.++..
T Consensus 240 D~vid~~g~~-------------------------~~~~~~~~~l~~-----~G~iv~~g~~ 271 (344)
T 2h6e_A 240 SIAIDLVGTE-------------------------ETTYNLGKLLAQ-----EGAIILVGME 271 (344)
T ss_dssp EEEEESSCCH-------------------------HHHHHHHHHEEE-----EEEEEECCCC
T ss_pred cEEEECCCCh-------------------------HHHHHHHHHhhc-----CCEEEEeCCC
Confidence 9999999831 123445555655 5799988764
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0023 Score=59.51 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=65.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDV 114 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~ 114 (366)
|+ ++|+||+|++|...+..+...|++|+++++++++.+.+.+ + |.+..+ |..+.+. +++. +++|+
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~vi---~~~~~~~----~~~~~~~~~d~ 214 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L----GANRIL---SRDEFAE----SRPLEKQLWAG 214 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H----TCSEEE---EGGGSSC----CCSSCCCCEEE
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c----CCCEEE---ecCCHHH----HHhhcCCCccE
Confidence 56 9999999999999999999999999999999888765533 2 333222 2222111 2222 47899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++.++|. . ..+.+++.+++ .|+++.++...+
T Consensus 215 v~d~~g~------------------------~--~~~~~~~~l~~-----~G~iv~~G~~~~ 245 (324)
T 3nx4_A 215 AIDTVGD------------------------K--VLAKVLAQMNY-----GGCVAACGLAGG 245 (324)
T ss_dssp EEESSCH------------------------H--HHHHHHHTEEE-----EEEEEECCCTTC
T ss_pred EEECCCc------------------------H--HHHHHHHHHhc-----CCEEEEEecCCC
Confidence 9998872 1 23344555554 589999987543
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0012 Score=61.48 Aligned_cols=73 Identities=18% Similarity=0.188 Sum_probs=49.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVLV 116 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~vi 116 (366)
+++|+||+|++|..++..+...|++|+++++++++++.+. ++ +.+.. .|..+.+ .+.+++. +++|++|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l----Ga~~~---i~~~~~~--~~~~~~~~~~~~d~vi 221 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL----GAKEV---LAREDVM--AERIRPLDKQRWAAAV 221 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT----TCSEE---EECC-----------CCSCCEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc----CCcEE---EecCCcH--HHHHHHhcCCcccEEE
Confidence 7999999999999999998889999999999988776553 22 33221 3444432 2222322 4699999
Q ss_pred EcCCC
Q 017757 117 VNQGV 121 (366)
Q Consensus 117 ~nAG~ 121 (366)
.++|.
T Consensus 222 d~~g~ 226 (328)
T 1xa0_A 222 DPVGG 226 (328)
T ss_dssp ECSTT
T ss_pred ECCcH
Confidence 99984
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0013 Score=61.76 Aligned_cols=98 Identities=19% Similarity=0.208 Sum_probs=65.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~i 112 (366)
.|++++|+|+ |++|..++..+...|+ +|+.+++++++++.+.+ + ... ..|..+.+ +.+.+.+ -+++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~~----v~~~~~~~-~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----ADR----LVNPLEED-LLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CSE----EECTTTSC-HHHHHHHHHSSCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HHh----ccCcCccC-HHHHHHHhcCCCC
Confidence 7999999999 9999999998888999 89999998776553322 1 111 23544422 2222222 3479
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
|++|.++|. . ...+..++.+++ .|+++.+++.
T Consensus 233 D~vid~~g~----------~---------------~~~~~~~~~l~~-----~G~iv~~g~~ 264 (343)
T 2dq4_A 233 EVLLEFSGN----------E---------------AAIHQGLMALIP-----GGEARILGIP 264 (343)
T ss_dssp EEEEECSCC----------H---------------HHHHHHHHHEEE-----EEEEEECCCC
T ss_pred CEEEECCCC----------H---------------HHHHHHHHHHhc-----CCEEEEEecC
Confidence 999999983 1 123445556655 5799998873
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0045 Score=57.89 Aligned_cols=120 Identities=15% Similarity=0.176 Sum_probs=69.4
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcC--CeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
++.+++++.|+|+ |.+|.+++..|+..|. +|++.|+++++++-...++..... ..+.....| .+.
T Consensus 5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~----------~~a 73 (326)
T 3vku_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE----------YSD 73 (326)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC----------GGG
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc----------HHH
Confidence 3456778999996 9999999999999987 899999998887766666654221 123222211 123
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+...|++|.+||..... -++-.+.++.|..- .+.+.+.+.+... .+.++.+|.-.
T Consensus 74 ~~~aDiVvi~ag~~~kp------G~tR~dL~~~N~~I----~~~i~~~i~~~~p--~a~ilvvtNPv 128 (326)
T 3vku_A 74 AKDADLVVITAGAPQKP------GETRLDLVNKNLKI----LKSIVDPIVDSGF--NGIFLVAANPV 128 (326)
T ss_dssp GTTCSEEEECCCCC----------------------C----HHHHHHHHHTTTC--CSEEEECSSSH
T ss_pred hcCCCEEEECCCCCCCC------CchHHHHHHHHHHH----HHHHHHHHHhcCC--ceEEEEccCch
Confidence 45789999999964321 11223445556544 4444555555432 46777776533
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0033 Score=56.58 Aligned_cols=83 Identities=20% Similarity=0.296 Sum_probs=62.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEEE
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVAT 91 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~~ 91 (366)
.++++++|+|.|+ ||+|.++++.|+..|. +++++|++. .+.+.+++.+.... ..++..
T Consensus 24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~ 102 (251)
T 1zud_1 24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA 102 (251)
T ss_dssp HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 4578999999997 7899999999999997 688887653 56677777777654 346666
Q ss_pred EEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 92 YSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 92 ~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
+..++++ +.+.++++ ..|+||.+..
T Consensus 103 ~~~~~~~-~~~~~~~~---~~DvVi~~~d 127 (251)
T 1zud_1 103 LQQRLTG-EALKDAVA---RADVVLDCTD 127 (251)
T ss_dssp ECSCCCH-HHHHHHHH---HCSEEEECCS
T ss_pred EeccCCH-HHHHHHHh---cCCEEEECCC
Confidence 6665543 56667776 5799998864
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0056 Score=57.74 Aligned_cols=76 Identities=21% Similarity=0.318 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCC--C-HHHHHHHHHhc-C
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVR--D-FDAVKTALDEA-G 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls--~-~~~v~~~~~~~-~ 110 (366)
.|++++|+|+ |++|...+..+...|+ +|+++++++++++.+. ++ +... ..|.. + .+..+++.+.. +
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~~---vi~~~~~~~~~~~~~i~~~~~~ 241 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI----GADL---VLQISKESPQEIARKVEGQLGC 241 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT----TCSE---EEECSSCCHHHHHHHHHHHHTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----CCCE---EEcCcccccchHHHHHHHHhCC
Confidence 5889999996 8999999988888899 8999999887765443 22 3332 23444 2 33333333322 5
Q ss_pred CCcEEEEcCC
Q 017757 111 PVDVLVVNQG 120 (366)
Q Consensus 111 ~id~vi~nAG 120 (366)
++|++|.++|
T Consensus 242 g~D~vid~~g 251 (356)
T 1pl8_A 242 KPEVTIECTG 251 (356)
T ss_dssp CCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 7999999998
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0058 Score=58.03 Aligned_cols=77 Identities=23% Similarity=0.297 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~--~~ 111 (366)
.|+++||+|+ |++|..++..+...|+ +|+.+++++++++.+. ++ +.+. ..|.++ .+++.+.+.+. ++
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~---vi~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF----GATD---FVNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TCCE---EECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh----CCce---EEeccccchhHHHHHHHHhCCC
Confidence 5899999995 9999999998888999 7999999988876543 22 3322 134442 11233323221 47
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 263 ~D~vid~~g~ 272 (374)
T 1cdo_A 263 VDFSLECVGN 272 (374)
T ss_dssp BSEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0023 Score=60.48 Aligned_cols=101 Identities=15% Similarity=0.206 Sum_probs=66.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHH-HHHH-HHCCCe-EEEEecCch---hHHHHHHHHHhhcCCeEEEEEecCCCHH--HHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLAL-AHQA-AKEGAR-VSILARSGK---KLEEAKQSIQLATGIEVATYSADVRDFD--AVK 103 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~ai-a~~L-~~~G~~-V~l~~r~~~---~~~~~~~~l~~~~~~~v~~~~~Dls~~~--~v~ 103 (366)
..++++++++|+|+ |++|... +..+ ...|++ |+.++++++ +.+.+. ++ +.+. + |..+.+ ++.
T Consensus 168 ~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l----Ga~~--v--~~~~~~~~~i~ 237 (357)
T 2b5w_A 168 AFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL----DATY--V--DSRQTPVEDVP 237 (357)
T ss_dssp TSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT----TCEE--E--ETTTSCGGGHH
T ss_pred cccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc----CCcc--c--CCCccCHHHHH
Confidence 44566699999999 9999998 6655 567998 999999887 665442 32 3322 2 444322 133
Q ss_pred HHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 104 TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 104 ~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++ .+++|++|.++|.. + ..+.+++.+++ .|+++.++...
T Consensus 238 ~~---~gg~Dvvid~~g~~----------~---------------~~~~~~~~l~~-----~G~iv~~g~~~ 276 (357)
T 2b5w_A 238 DV---YEQMDFIYEATGFP----------K---------------HAIQSVQALAP-----NGVGALLGVPS 276 (357)
T ss_dssp HH---SCCEEEEEECSCCH----------H---------------HHHHHHHHEEE-----EEEEEECCCCC
T ss_pred Hh---CCCCCEEEECCCCh----------H---------------HHHHHHHHHhc-----CCEEEEEeCCC
Confidence 33 24799999999831 1 12344555554 57999988743
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0086 Score=56.85 Aligned_cols=78 Identities=17% Similarity=0.063 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVD 113 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id 113 (366)
-.|++++|+||+|++|...+..+...|++|+.+. ++++++. .+++ |... ..|..+.+-.+++.+.. +++|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~~l----Ga~~---vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AKSR----GAEE---VFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHHT----TCSE---EEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HHHc----CCcE---EEECCCchHHHHHHHHccCCcc
Confidence 4789999999999999999999999999998886 5666553 2333 3322 23555544333333322 4699
Q ss_pred EEEEcCCC
Q 017757 114 VLVVNQGV 121 (366)
Q Consensus 114 ~vi~nAG~ 121 (366)
+++.++|.
T Consensus 234 ~v~d~~g~ 241 (371)
T 3gqv_A 234 YALDCITN 241 (371)
T ss_dssp EEEESSCS
T ss_pred EEEECCCc
Confidence 99999983
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.016 Score=54.02 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=73.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhc-----CCeEEEEEecCCCHHHHHHHHH
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLAT-----GIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-----~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+++.+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++.... ..++.. ..| . +
T Consensus 4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~-------~ 71 (324)
T 3gvi_A 4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y-------A 71 (324)
T ss_dssp --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G-------G
T ss_pred CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H-------H
Confidence 356778999998 9999999999999998 99999999988765544444321 223322 122 1 2
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
.+...|++|.++|...... .+ -.+.+..|.. +.+.+.+.+.+... .+.++.+|.-..
T Consensus 72 a~~~aDiVIiaag~p~k~G---~~---R~dl~~~N~~----i~~~i~~~i~~~~p--~a~iivvtNPvd 128 (324)
T 3gvi_A 72 AIEGADVVIVTAGVPRKPG---MS---RDDLLGINLK----VMEQVGAGIKKYAP--EAFVICITNPLD 128 (324)
T ss_dssp GGTTCSEEEECCSCCCC-----------CHHHHHHHH----HHHHHHHHHHHHCT--TCEEEECCSSHH
T ss_pred HHCCCCEEEEccCcCCCCC---CC---HHHHHHhhHH----HHHHHHHHHHHHCC--CeEEEecCCCcH
Confidence 3447899999999643211 12 2234455554 44445555554431 467777776443
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0077 Score=57.09 Aligned_cols=77 Identities=25% Similarity=0.282 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~--~~ 111 (366)
.|+++||+|+ |++|..++..+...|+ +|+++++++++++.+. ++ +... ..|.++ .+++.+.+.+. ++
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~---vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF----GATE---CINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH----TCSE---EECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc----CCce---EeccccccccHHHHHHHHhCCC
Confidence 5889999996 9999999988888899 7999999988876543 33 3222 124432 12233333322 47
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 261 ~D~vid~~g~ 270 (373)
T 2fzw_A 261 VDYSFECIGN 270 (373)
T ss_dssp BSEEEECSCC
T ss_pred CCEEEECCCc
Confidence 9999999984
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.012 Score=54.78 Aligned_cols=119 Identities=16% Similarity=0.173 Sum_probs=74.1
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC--chhHHHHHHHHHhh-----cCCeEEEEEecCCCHHHHHH
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS--GKKLEEAKQSIQLA-----TGIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~--~~~~~~~~~~l~~~-----~~~~v~~~~~Dls~~~~v~~ 104 (366)
|+++.+++.|+|+ |.+|..+|..|+..|. +|++.+++ +++++....++... ...++.. ..|
T Consensus 4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d--------- 72 (315)
T 3tl2_A 4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD--------- 72 (315)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---------
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---------
Confidence 5667889999997 9999999999999999 99999998 45554443333321 1222322 111
Q ss_pred HHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 105 ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 105 ~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
.+.+...|++|.+||..... ..+. .+.++.|..-.-.+.+.+ .+... .+.++.+|.-.
T Consensus 73 -~~a~~~aDvVIiaag~p~kp---g~~R---~dl~~~N~~i~~~i~~~i----~~~~p--~a~vlvvsNPv 130 (315)
T 3tl2_A 73 -YADTADSDVVVITAGIARKP---GMSR---DDLVATNSKIMKSITRDI----AKHSP--NAIIVVLTNPV 130 (315)
T ss_dssp -GGGGTTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHH----HHHCT--TCEEEECCSSH
T ss_pred -HHHhCCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----HHhCC--CeEEEECCChH
Confidence 12345799999999975332 1233 335566665444444444 44321 46777777543
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0042 Score=59.02 Aligned_cols=74 Identities=24% Similarity=0.307 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|.++||+|+ |++|..++..+...|++|+++++++++++.+.+ + +... ..|..+.+.++++. +++|++
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l----Ga~~---vi~~~~~~~~~~~~---~g~Dvv 261 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L----GADE---VVNSRNADEMAAHL---KSFDFI 261 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H----TCSE---EEETTCHHHHHTTT---TCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CCcE---EeccccHHHHHHhh---cCCCEE
Confidence 5899999997 899999998888899999999999888765542 3 3222 23666655443332 579999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
|.++|.
T Consensus 262 id~~g~ 267 (369)
T 1uuf_A 262 LNTVAA 267 (369)
T ss_dssp EECCSS
T ss_pred EECCCC
Confidence 999985
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0019 Score=57.17 Aligned_cols=72 Identities=14% Similarity=0.136 Sum_probs=56.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
.+.++|.|+ |.+|+.+++.|.++|+ |++++++++..+... ..+.++..|.++++.++++ .....|.+|
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a--~i~~ad~vi 76 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--------SGANFVHGDPTRVSDLEKA--NVRGARAVI 76 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--------TTCEEEESCTTCHHHHHHT--TCTTCSEEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--------cCCeEEEcCCCCHHHHHhc--CcchhcEEE
Confidence 457888897 8999999999999999 999999988765442 1367789999999877765 133689999
Q ss_pred EcCC
Q 017757 117 VNQG 120 (366)
Q Consensus 117 ~nAG 120 (366)
.+.+
T Consensus 77 ~~~~ 80 (234)
T 2aef_A 77 VDLE 80 (234)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 8765
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0042 Score=58.25 Aligned_cols=119 Identities=13% Similarity=0.069 Sum_probs=70.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC--e-----EEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA--R-----VSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~--~-----V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.+++||||+|.||..++..|+.+|. + ++++|+++ +.++-...++....-.....+. .+ ++. .+.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~~--~~~---~~~ 76 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--AT--DKE---EIA 76 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EE--SCH---HHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE--Ec--CCc---HHH
Confidence 4799999999999999999999875 5 99999975 3455445555442111111111 11 111 222
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc-EEEEecCCc
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPA-SIALMSSQA 175 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g-~iv~vsS~~ 175 (366)
+...|++|+.||...... .+ -.+.++.|......+.+.+ .+... .+ .++.+|.-.
T Consensus 77 ~~daDvVvitAg~prkpG---~t---R~dll~~N~~i~~~i~~~i----~~~~~--~~~~vivvsNPv 132 (333)
T 5mdh_A 77 FKDLDVAILVGSMPRRDG---ME---RKDLLKANVKIFKCQGAAL----DKYAK--KSVKVIVVGNPA 132 (333)
T ss_dssp TTTCSEEEECCSCCCCTT---CC---TTTTHHHHHHHHHHHHHHH----HHHSC--TTCEEEECSSSH
T ss_pred hCCCCEEEEeCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----HHhCC--CCeEEEEcCCch
Confidence 347899999999653211 12 2335667776665555554 44331 24 577777533
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0017 Score=58.59 Aligned_cols=70 Identities=14% Similarity=0.292 Sum_probs=51.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.++| +++|.|+ ||.|++++..|.+.|+ +|++++|+.++.+++.+++ ... +. +++.+.++ ..
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~--------~~~--~~---~~~~~~~~---~a 167 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV--------KIF--SL---DQLDEVVK---KA 167 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC--------EEE--EG---GGHHHHHH---TC
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc--------ccC--CH---HHHHhhhc---CC
Confidence 4678 8999996 8999999999999998 8999999988766543321 111 22 23444444 68
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|+||++...
T Consensus 168 DiVInatp~ 176 (253)
T 3u62_A 168 KSLFNTTSV 176 (253)
T ss_dssp SEEEECSST
T ss_pred CEEEECCCC
Confidence 999998754
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.01 Score=56.38 Aligned_cols=77 Identities=25% Similarity=0.336 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHh--cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDE--AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~--~~~ 111 (366)
.|++++|+|+ |++|..++..+...|+ +|+++++++++++.+. ++ +.+. ..|.++ .+++.+.+.+ .+.
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~~---vi~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL----GATD---CLNPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TCSE---EECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CCcE---EEccccccchHHHHHHHHhCCC
Confidence 5899999996 9999999988888999 7999999988876543 22 3322 124432 1122222222 147
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 266 ~Dvvid~~G~ 275 (376)
T 1e3i_A 266 VDYSLDCAGT 275 (376)
T ss_dssp BSEEEESSCC
T ss_pred ccEEEECCCC
Confidence 9999999984
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=96.64 E-value=0.009 Score=55.93 Aligned_cols=121 Identities=12% Similarity=0.160 Sum_probs=75.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh--cCCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA--TGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~--~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.+...+++.|+|+ |.+|.+++..|+.+|. +|++.+++.++++....++... +......... .|. +.
T Consensus 15 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~-------~~ 84 (331)
T 4aj2_A 15 EQVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY-------SV 84 (331)
T ss_dssp --CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG-------GG
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH-------HH
Confidence 3566788999997 9999999999999987 8999999988887766666542 1111111211 121 22
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+...|++|.+||...... .+. .+.++.|..-...+.+.+ .+... .+.++++|.-.
T Consensus 85 ~~~aDiVvi~aG~~~kpG---~tR---~dL~~~N~~I~~~i~~~i----~~~~p--~a~vlvvtNPv 139 (331)
T 4aj2_A 85 TANSKLVIITAGARQQEG---ESR---LNLVQRNVNIFKFIIPNV----VKYSP--QCKLLIVSNPV 139 (331)
T ss_dssp GTTEEEEEECCSCCCCTT---CCG---GGGHHHHHHHHHHHHHHH----HHHCT--TCEEEECSSSH
T ss_pred hCCCCEEEEccCCCCCCC---ccH---HHHHHHHHHHHHHHHHHH----HHHCC--CeEEEEecChH
Confidence 447899999999754321 122 235566655444444444 44321 46777777643
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0023 Score=60.51 Aligned_cols=75 Identities=24% Similarity=0.209 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|++++|+|+ |++|...+..+...|++|+++++++++.+.+.+++ +.+. ..|..+.+.++++. +++|++
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l----Ga~~---vi~~~~~~~~~~~~---~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL----GADD---YVIGSDQAKMSELA---DSLDYV 248 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS----CCSC---EEETTCHHHHHHST---TTEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc----CCce---eeccccHHHHHHhc---CCCCEE
Confidence 6899999995 99999999888888999999999988766544232 3222 13555555444332 479999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
|.++|.
T Consensus 249 id~~g~ 254 (357)
T 2cf5_A 249 IDTVPV 254 (357)
T ss_dssp EECCCS
T ss_pred EECCCC
Confidence 999984
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0023 Score=60.56 Aligned_cols=74 Identities=24% Similarity=0.281 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH-HHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF-DAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~-~~v~~~~~~~~~id~ 114 (366)
.|+++||+|+ |++|..++..+...|++|+.+++++++++.+.+ + +.+.. .|..+. +..+++. +++|+
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~v---~~~~~~~~~~~~~~---~~~D~ 246 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M----GADHY---IATLEEGDWGEKYF---DTFDL 246 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H----TCSEE---EEGGGTSCHHHHSC---SCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c----CCCEE---EcCcCchHHHHHhh---cCCCE
Confidence 5899999999 999999998888899999999999888765533 3 32221 243333 2222221 57999
Q ss_pred EEEcCCC
Q 017757 115 LVVNQGV 121 (366)
Q Consensus 115 vi~nAG~ 121 (366)
+|.++|.
T Consensus 247 vid~~g~ 253 (360)
T 1piw_A 247 IVVCASS 253 (360)
T ss_dssp EEECCSC
T ss_pred EEECCCC
Confidence 9999985
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0071 Score=57.41 Aligned_cols=77 Identities=23% Similarity=0.333 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~--~~ 111 (366)
.|++++|+|+ |++|..++..+...|+ +|+.+++++++++.+. ++ +.+. ..|.++ .+++.+.+.+. ++
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~---vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV----GATE---CVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TCSE---EECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CCce---EecccccchhHHHHHHHHhCCC
Confidence 5899999995 9999999998888999 7999999988876543 22 3222 134432 12233333322 47
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 262 ~D~vid~~g~ 271 (374)
T 2jhf_A 262 VDFSFEVIGR 271 (374)
T ss_dssp BSEEEECSCC
T ss_pred CcEEEECCCC
Confidence 9999999984
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0085 Score=56.13 Aligned_cols=91 Identities=16% Similarity=0.266 Sum_probs=65.3
Q ss_pred HcCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc
Q 017757 26 VRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT 85 (366)
Q Consensus 26 ~~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~ 85 (366)
..+......+++++|+|.|+ ||+|.++++.|+..|. +++++|++. .+.+.+++.+.+..
T Consensus 23 ll~~~g~~kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~in 101 (340)
T 3rui_A 23 ILPDLNLDIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 101 (340)
T ss_dssp TCTTCCHHHHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred hcchhhHHHHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhC
Confidence 34444445789999999996 8999999999999996 588988764 46677777777654
Q ss_pred -CCeEEEEEecCC--------------CHHHHHHHHHhcCCCcEEEEcCC
Q 017757 86 -GIEVATYSADVR--------------DFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 86 -~~~v~~~~~Dls--------------~~~~v~~~~~~~~~id~vi~nAG 120 (366)
..++..+..++. +.+.+.++++ ..|+||.+..
T Consensus 102 P~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~---~~DlVvd~tD 148 (340)
T 3rui_A 102 PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIK---EHDIIFLLVD 148 (340)
T ss_dssp TTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHH---HCSEEEECCS
T ss_pred CCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhc---cCCEEEecCC
Confidence 346666665542 2233455555 6799999875
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0052 Score=55.99 Aligned_cols=43 Identities=28% Similarity=0.387 Sum_probs=38.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~ 74 (366)
..+++||+++|.|+++-+|+.+|..|.++|++|+++++....+
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L 197 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDL 197 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhH
Confidence 3678999999999998899999999999999999998865443
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0055 Score=57.89 Aligned_cols=75 Identities=25% Similarity=0.214 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--C-C
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--G-P 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~-~ 111 (366)
.|++++|+|+ |++|...+..+... |++|+.+++++++++.+. ++ |.+. ..|..+. +.+.+.+. + +
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga~~---vi~~~~~--~~~~v~~~~~g~g 254 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL----GADH---VVDARRD--PVKQVMELTRGRG 254 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT----TCSE---EEETTSC--HHHHHHHHTTTCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh----CCCE---EEeccch--HHHHHHHHhCCCC
Confidence 5889999999 89999999888888 999999999887766543 23 3322 1355544 33333332 3 6
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 255 ~Dvvid~~G~ 264 (359)
T 1h2b_A 255 VNVAMDFVGS 264 (359)
T ss_dssp EEEEEESSCC
T ss_pred CcEEEECCCC
Confidence 9999999983
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0068 Score=57.69 Aligned_cols=44 Identities=18% Similarity=0.219 Sum_probs=39.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHH
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQ 79 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~ 79 (366)
+.+++++|+|+ |.+|..+++.+...|++|++++|+.++++.+.+
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57899999997 899999999999999999999999988776643
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0024 Score=58.48 Aligned_cols=70 Identities=17% Similarity=0.244 Sum_probs=52.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.++++|+++|+|+ ||.|++++..|.+.|+ +|+++.|+.++.+++++++ ... ..+++.+ . .
T Consensus 118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~--------~~~-----~~~~l~~----l-~ 178 (282)
T 3fbt_A 118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF--------KVI-----SYDELSN----L-K 178 (282)
T ss_dssp CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS--------EEE-----EHHHHTT----C-C
T ss_pred CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc--------Ccc-----cHHHHHh----c-c
Confidence 5678999999997 7999999999999998 8999999998877654432 111 1223322 3 6
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
.|+|||+...
T Consensus 179 ~DivInaTp~ 188 (282)
T 3fbt_A 179 GDVIINCTPK 188 (282)
T ss_dssp CSEEEECSST
T ss_pred CCEEEECCcc
Confidence 8999999754
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.011 Score=56.88 Aligned_cols=43 Identities=23% Similarity=0.253 Sum_probs=38.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA 77 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~ 77 (366)
.+.+++++|+|+ |.+|+.+++.+...|++|++++++..+++.+
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 377999999996 8999999999999999999999999887664
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0085 Score=56.73 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHH-CCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAK-EGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|+++||+||+|++|...+..+.. .|++|+++++++++.+.+. ++ |.+.. .|-.+ ++.+.+.+. +++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l----Gad~v---i~~~~--~~~~~v~~~~~~g~ 240 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL----GAHHV---IDHSK--PLAAEVAALGLGAP 240 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT----TCSEE---ECTTS--CHHHHHHTTCSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc----CCCEE---EeCCC--CHHHHHHHhcCCCc
Confidence 688999999999999887766655 5899999999987766543 22 33322 24333 233333332 479
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|+++.++|
T Consensus 241 Dvvid~~g 248 (363)
T 4dvj_A 241 AFVFSTTH 248 (363)
T ss_dssp EEEEECSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.029 Score=52.42 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=55.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh---c--CCeEEEEEecCCCHHHHHHHH
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA---T--GIEVATYSADVRDFDAVKTAL 106 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~--~~~v~~~~~Dls~~~~v~~~~ 106 (366)
|..+..++.|+|| |.+|.++|..|+.+|. +|++.++++++++.....+... . ..++.. . +| .++.+
T Consensus 5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d---~~ea~ 76 (331)
T 1pzg_A 5 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YS---YEAAL 76 (331)
T ss_dssp CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CS---HHHHH
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CC---HHHHh
Confidence 4444568999998 9999999999999998 9999999998877644444321 1 122322 1 23 22233
Q ss_pred HhcCCCcEEEEcCCCCC
Q 017757 107 DEAGPVDVLVVNQGVFV 123 (366)
Q Consensus 107 ~~~~~id~vi~nAG~~~ 123 (366)
+ ..|++|..+|...
T Consensus 77 ~---~aDiVi~a~g~p~ 90 (331)
T 1pzg_A 77 T---GADCVIVTAGLTK 90 (331)
T ss_dssp T---TCSEEEECCSCSS
T ss_pred C---CCCEEEEccCCCC
Confidence 3 6899999998654
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0017 Score=59.19 Aligned_cols=73 Identities=23% Similarity=0.339 Sum_probs=52.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.++++++++|.|+ |++|+++++.|.+.|++|++++|+.++.++..+++ + +. +.+ ++.+.+ ...
T Consensus 125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~----g--~~-----~~~--~~~~~~---~~a 187 (275)
T 2hk9_A 125 PEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF----P--LE-----VVN--SPEEVI---DKV 187 (275)
T ss_dssp TTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS----C--EE-----ECS--CGGGTG---GGC
T ss_pred CCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc----C--Ce-----eeh--hHHhhh---cCC
Confidence 3578999999996 79999999999999999999999987766544322 2 21 111 122222 368
Q ss_pred cEEEEcCCCC
Q 017757 113 DVLVVNQGVF 122 (366)
Q Consensus 113 d~vi~nAG~~ 122 (366)
|++|++....
T Consensus 188 DiVi~atp~~ 197 (275)
T 2hk9_A 188 QVIVNTTSVG 197 (275)
T ss_dssp SEEEECSSTT
T ss_pred CEEEEeCCCC
Confidence 9999998754
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.014 Score=55.45 Aligned_cols=101 Identities=27% Similarity=0.336 Sum_probs=67.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH---h-cC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD---E-AG 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~---~-~~ 110 (366)
.|+++||+|+ |++|...+..+...|+ +|+++++++++.+.+ +++ |... ..|.++.+-.+.+.+ . .+
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l----Ga~~---vi~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV----GATA---TVDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH----TCSE---EECTTSSCHHHHHHSTTSSSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc----CCCE---EECCCCcCHHHHHHhhhhccCC
Confidence 5889999998 9999999988888999 799999988776533 333 3322 235555443344333 1 24
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++|++|.++|.. ...+.+++.+++ .|+++.++...
T Consensus 253 g~Dvvid~~G~~-------------------------~~~~~~~~~l~~-----~G~vv~~G~~~ 287 (370)
T 4ej6_A 253 GVDVVIECAGVA-------------------------ETVKQSTRLAKA-----GGTVVILGVLP 287 (370)
T ss_dssp CEEEEEECSCCH-------------------------HHHHHHHHHEEE-----EEEEEECSCCC
T ss_pred CCCEEEECCCCH-------------------------HHHHHHHHHhcc-----CCEEEEEeccC
Confidence 799999999831 123345556555 57999887643
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.065 Score=49.97 Aligned_cols=116 Identities=15% Similarity=0.176 Sum_probs=73.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhc----CCeEEEEEecCCCHHHHHHHHHhc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLAT----GIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~----~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
..+++.|+|+ |.+|..+|..|+.+|. +|++.|+++++++....++.... ..++. ...|.. .+
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~t~d~~----------~~ 87 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIV-SGKDYS----------VS 87 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEE-EESSSC----------SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEE-EcCCHH----------Hh
Confidence 5678999998 9999999999999997 89999999887776665554421 11222 122322 23
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
...|++|.+||...... .+. .+.+..|..- .+.+.+.+.+... .+.++++|.-.
T Consensus 88 ~daDiVIitaG~p~kpG---~tR---~dll~~N~~I----~k~i~~~I~k~~P--~a~ilvvtNPv 141 (330)
T 3ldh_A 88 AGSKLVVITAGARQQEG---ESR---LNLVQRNVNI----FKFIIPNIVKHSP--DCLKELHPELG 141 (330)
T ss_dssp SSCSEEEECCSCCCCSS---CCT---TGGGHHHHHH----HHHHHHHHHHHCT--TCEEEECSSSH
T ss_pred CCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHH----HHHHHHHHHhhCC--CceEEeCCCcc
Confidence 47899999999754321 121 1244555544 3444444444321 56777777643
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.01 Score=54.60 Aligned_cols=74 Identities=23% Similarity=0.340 Sum_probs=54.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
...++|++++|.|+ |.||+++++.+...|++|++.+|+.++.+...+ .+.+ .+ + .++++++++ .
T Consensus 152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-----~g~~--~~--~---~~~l~~~l~---~ 215 (300)
T 2rir_A 152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-----MGLV--PF--H---TDELKEHVK---D 215 (300)
T ss_dssp SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----TTCE--EE--E---GGGHHHHST---T
T ss_pred CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----CCCe--EE--c---hhhHHHHhh---C
Confidence 35789999999996 999999999999999999999999876544322 1322 11 1 123444443 7
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
.|+|+++...
T Consensus 216 aDvVi~~~p~ 225 (300)
T 2rir_A 216 IDICINTIPS 225 (300)
T ss_dssp CSEEEECCSS
T ss_pred CCEEEECCCh
Confidence 8999999874
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0042 Score=58.40 Aligned_cols=69 Identities=26% Similarity=0.348 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|+++||+|+ |++|...+..+...|++|+++++++++.+.+.+ + |.+..+ ++.+.+++ ++|++
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~v~-----~~~~~~~~------~~D~v 238 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-M----GVKHFY-----TDPKQCKE------ELDFI 238 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-T----TCSEEE-----SSGGGCCS------CEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-c----CCCeec-----CCHHHHhc------CCCEE
Confidence 5899999997 999999998888899999999999988765432 2 333322 33332222 79999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
|.++|.
T Consensus 239 id~~g~ 244 (348)
T 3two_A 239 ISTIPT 244 (348)
T ss_dssp EECCCS
T ss_pred EECCCc
Confidence 999984
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.014 Score=55.82 Aligned_cols=44 Identities=20% Similarity=0.202 Sum_probs=39.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHH
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAK 78 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~ 78 (366)
.+.+++++|+|+ |++|+.+++.+...|++|++++|++.+++.+.
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE 212 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 578999999996 89999999999999999999999988776653
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0095 Score=56.65 Aligned_cols=77 Identities=27% Similarity=0.339 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~--~~ 111 (366)
.|.+++|+|+ |++|...+..+...|+ +|+++++++++++.+ +++ +... ..|..+ .+++.+.+.+. ++
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l----Ga~~---vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF----GVNE---FVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT----TCCE---EECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc----CCcE---EEccccCchhHHHHHHHhcCCC
Confidence 5889999998 9999999988888899 799999998887643 222 3322 234332 12233333332 47
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 264 ~D~vid~~g~ 273 (378)
T 3uko_A 264 VDYSFECIGN 273 (378)
T ss_dssp BSEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.028 Score=52.30 Aligned_cols=117 Identities=19% Similarity=0.226 Sum_probs=73.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhc-----CCeEEEEEecCCCHHHHHHHHHh
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLAT-----GIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-----~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
|+.+++.|+|+ |.+|.+++..|+.+|. +|++.++++++++....++.... ..++.. .. +. +.
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~-t~---d~-------~a 70 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG-TN---DY-------KD 70 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ES---CG-------GG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE-cC---CH-------HH
Confidence 34567889995 9999999999999988 99999999988765555554321 223321 11 21 23
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+...|++|..||..... ..+..+ .+..|..-. +.+.+.+.+... .+.++.+|.-.
T Consensus 71 ~~~aDvVIi~ag~p~k~---G~~R~d---l~~~N~~i~----~~i~~~i~~~~p--~a~vivvtNPv 125 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRKP---GMSRDD---LLGINIKVM----QTVGEGIKHNCP--NAFVICITNPL 125 (321)
T ss_dssp GTTCSEEEECCSCCCCT---TCCHHH---HHHHHHHHH----HHHHHHHHHHCT--TCEEEECCSSH
T ss_pred HCCCCEEEEcCCcCCCC---CCCHHH---HHHHhHHHH----HHHHHHHHHHCC--CcEEEEecCch
Confidence 44789999999965322 123333 455555444 444444444431 46777776533
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.018 Score=54.50 Aligned_cols=77 Identities=21% Similarity=0.251 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id 113 (366)
.|+++||+|+ |++|...+..+...|+ +|+.+++++++++.+. ++ +.+.. .|..+.+-.+++.+.. +++|
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~~v---i~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL----GATHV---INSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH----TCSEE---EETTTSCHHHHHHHHTTSCEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc----CCCEE---ecCCccCHHHHHHHhcCCCCc
Confidence 5889999995 9999999888878899 6999999887766542 33 32221 2443332223332222 3799
Q ss_pred EEEEcCCC
Q 017757 114 VLVVNQGV 121 (366)
Q Consensus 114 ~vi~nAG~ 121 (366)
++|.++|.
T Consensus 261 ~vid~~g~ 268 (371)
T 1f8f_A 261 FALESTGS 268 (371)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99999983
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0042 Score=57.68 Aligned_cols=73 Identities=23% Similarity=0.353 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|++++|+||+|++|...+..+...|++|+.++++ ++. +..+++ +.+. ..|..+.+.+ .+...++|++
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~-~~~~~l----Ga~~---~i~~~~~~~~---~~~~~g~D~v 219 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNH-AFLKAL----GAEQ---CINYHEEDFL---LAISTPVDAV 219 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHH-HHHHHH----TCSE---EEETTTSCHH---HHCCSCEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chH-HHHHHc----CCCE---EEeCCCcchh---hhhccCCCEE
Confidence 68999999999999999999999999999988753 332 233332 3332 2344443322 2333589999
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
+.++|
T Consensus 220 ~d~~g 224 (321)
T 3tqh_A 220 IDLVG 224 (321)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99998
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0039 Score=58.87 Aligned_cols=81 Identities=17% Similarity=0.246 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH--HHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF--DAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~--~~v~~~~~~~~~id 113 (366)
.|+++||+||+|++|...+..+...|++++.+.++.++.++..+.++.. |.+..+ |-.+. +.+.++.+..+++|
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l-Ga~~vi---~~~~~~~~~~~~~~~~~~~~D 242 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSL-GAEHVI---TEEELRRPEMKNFFKDMPQPR 242 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHT-TCSEEE---EHHHHHSGGGGGTTSSSCCCS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhc-CCcEEE---ecCcchHHHHHHHHhCCCCce
Confidence 5899999999999999998877778999887776544322222222222 333211 21111 11222111122589
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++|.++|
T Consensus 243 vvid~~g 249 (357)
T 1zsy_A 243 LALNCVG 249 (357)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0088 Score=56.98 Aligned_cols=79 Identities=11% Similarity=0.181 Sum_probs=54.6
Q ss_pred CCCCEEEEEc-CCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CC
Q 017757 35 IKDRHVFITG-GSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GP 111 (366)
Q Consensus 35 l~gk~vLITG-as~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~ 111 (366)
-.|.+++|.| |+|++|...+..+...|++|+.+++++++.+.+.+ + +.+.. .|-.+.+-.+++.+.. ..
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~~---~~~~~~~~~~~v~~~t~~~g 240 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-Q----GAVHV---CNAASPTFMQDLTEALVSTG 240 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-T----TCSCE---EETTSTTHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-C----CCcEE---EeCCChHHHHHHHHHhcCCC
Confidence 3588899997 89999999998888889999999998887665432 2 33221 2444433223322221 26
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 241 ~d~v~d~~g~ 250 (379)
T 3iup_A 241 ATIAFDATGG 250 (379)
T ss_dssp CCEEEESCEE
T ss_pred ceEEEECCCc
Confidence 9999999984
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.013 Score=53.40 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=37.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~ 74 (366)
..+++||+++|.|.++-+|+.+|..|.+.|++|+++.+....+
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L 198 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDL 198 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCH
Confidence 3678999999999988899999999999999999998755433
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.065 Score=50.32 Aligned_cols=123 Identities=12% Similarity=0.104 Sum_probs=70.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCch--hHHHHHHHHHhh-cCCeEEEEEecCCCHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-------RVSILARSGK--KLEEAKQSIQLA-TGIEVATYSADVRDFDA 101 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~~--~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~ 101 (366)
+-+++.-+|.|+||+|+||..++..|++... ++.+.|.++. .++-..-++... +......... ++.
T Consensus 19 ~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~-- 94 (345)
T 4h7p_A 19 PGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP-- 94 (345)
T ss_dssp ---CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH--
T ss_pred CCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh--
Confidence 3456677899999999999999999998643 6899998763 334333344432 1222222221 122
Q ss_pred HHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 102 VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 102 v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
. +.+...|++|..||..... .++.++ .++.|..= ++...+.+.+...+ ...|+.+|.
T Consensus 95 -~---~a~~~advVvi~aG~prkp---GmtR~D---Ll~~Na~I----~~~~~~~i~~~a~~-~~~vlvvsN 151 (345)
T 4h7p_A 95 -R---VAFDGVAIAIMCGAFPRKA---GMERKD---LLEMNARI----FKEQGEAIAAVAAS-DCRVVVVGN 151 (345)
T ss_dssp -H---HHTTTCSEEEECCCCCCCT---TCCHHH---HHHHHHHH----HHHHHHHHHHHSCT-TCEEEECSS
T ss_pred -H---HHhCCCCEEEECCCCCCCC---CCCHHH---HHHHhHHH----HHHHHHHHHhhccC-ceEEEEeCC
Confidence 1 2244789999999975432 234444 56666554 44555555443211 345666664
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.012 Score=53.69 Aligned_cols=42 Identities=17% Similarity=0.191 Sum_probs=37.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
..+++||+++|.|+++-+|+.+|..|.++|++|+++.|....
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~ 197 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD 197 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh
Confidence 357999999999998889999999999999999999876443
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.061 Score=49.91 Aligned_cols=116 Identities=13% Similarity=0.205 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHHHHhc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
++..++.|+|+ |.+|..++..|+.+| .+|++.++++++++....++.... +.++.... | + .+.+
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~-------~~a~ 72 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E-------YSDC 72 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C-------GGGG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C-------HHHh
Confidence 45568999998 999999999999988 489999999877765444443321 12332222 2 2 2224
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
...|++|..+|..... ..+.. ..+..|.. +++.+.+.+.+... .+.++++|.
T Consensus 73 ~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~----i~~~i~~~i~~~~p--~a~viv~tN 124 (317)
T 3d0o_A 73 HDADLVVICAGAAQKP---GETRL---DLVSKNLK----IFKSIVGEVMASKF--DGIFLVATN 124 (317)
T ss_dssp TTCSEEEECCCCCCCT---TCCHH---HHHHHHHH----HHHHHHHHHHHTTC--CSEEEECSS
T ss_pred CCCCEEEECCCCCCCC---CCcHH---HHHHHHHH----HHHHHHHHHHHhCC--CcEEEEecC
Confidence 4789999999975322 12322 23444444 44455555555431 466777654
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.022 Score=54.61 Aligned_cols=44 Identities=23% Similarity=0.276 Sum_probs=39.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHH
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQ 79 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~ 79 (366)
+.+.+++|+|+ |.+|..+++.+...|++|++++++..+++.+.+
T Consensus 188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 57889999998 899999999999999999999999988766543
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.015 Score=53.32 Aligned_cols=41 Identities=24% Similarity=0.338 Sum_probs=36.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
..+++||+++|.|+++-+|+.+|..|.+.|++|++++|...
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~ 200 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS 200 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 35789999999999888999999999999999999988544
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0091 Score=57.70 Aligned_cols=74 Identities=18% Similarity=0.296 Sum_probs=54.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+..++|.|. |.+|+.+++.|.++|.+|++++++++..+.+.+ . .+..+..|.++++.++++ ...+.|++|
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~---g~~vi~GDat~~~~L~~a--gi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F---GMKVFYGDATRMDLLESA--GAAKAEVLI 73 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T---TCCCEESCTTCHHHHHHT--TTTTCSEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C---CCeEEEcCCCCHHHHHhc--CCCccCEEE
Confidence 346889996 889999999999999999999999988766542 1 244577899988877665 112455555
Q ss_pred EcCC
Q 017757 117 VNQG 120 (366)
Q Consensus 117 ~nAG 120 (366)
.+.+
T Consensus 74 v~~~ 77 (413)
T 3l9w_A 74 NAID 77 (413)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 5543
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.015 Score=58.52 Aligned_cols=93 Identities=15% Similarity=0.237 Sum_probs=66.8
Q ss_pred HHHcCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHh
Q 017757 24 LIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQL 83 (366)
Q Consensus 24 ~~~~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~ 83 (366)
+...+......+++.+|+|.|+ ||+|.++|+.|+..|. +++++|.+. .+.+.+++.+.+
T Consensus 313 wRllp~~g~ekL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~ 391 (615)
T 4gsl_A 313 WRILPDLNLDIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR 391 (615)
T ss_dssp HHTCTTCCHHHHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HhhcchhhHHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHh
Confidence 3344444445789999999996 8999999999999996 699998864 466777777776
Q ss_pred hc-CCeEEEEEecC-------CC-------HHHHHHHHHhcCCCcEEEEcCC
Q 017757 84 AT-GIEVATYSADV-------RD-------FDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 84 ~~-~~~v~~~~~Dl-------s~-------~~~v~~~~~~~~~id~vi~nAG 120 (366)
.. ..++..+..++ ++ .+.+.++++ ..|+||.+..
T Consensus 392 iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~---~~DlVvd~tD 440 (615)
T 4gsl_A 392 IFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIK---EHDIIFLLVD 440 (615)
T ss_dssp HCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHH---HCSEEEECCS
T ss_pred hCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhh---cCCEEEecCC
Confidence 64 35666666554 22 233444555 6799999875
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0043 Score=57.69 Aligned_cols=84 Identities=15% Similarity=0.095 Sum_probs=58.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEE-EEEecCCCHHHHHHHHHhcC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVA-TYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~-~~~~Dls~~~~v~~~~~~~~ 110 (366)
..+++|++++|.|++.=+|+.+|+.|++.|++|++++|+..++.+..+++. .... ......++++++.+.+.
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la----~~~~~~t~~~~t~~~~L~e~l~--- 244 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK----LNKHHVEDLGEYSEDLLKKCSL--- 244 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS----CCCCEEEEEEECCHHHHHHHHH---
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh----hhcccccccccccHhHHHHHhc---
Confidence 347999999999987778999999999999999999998443222111111 1111 11112245677888877
Q ss_pred CCcEEEEcCCCC
Q 017757 111 PVDVLVVNQGVF 122 (366)
Q Consensus 111 ~id~vi~nAG~~ 122 (366)
..|+||...|..
T Consensus 245 ~ADIVIsAtg~p 256 (320)
T 1edz_A 245 DSDVVITGVPSE 256 (320)
T ss_dssp HCSEEEECCCCT
T ss_pred cCCEEEECCCCC
Confidence 569999999864
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0069 Score=55.61 Aligned_cols=72 Identities=25% Similarity=0.365 Sum_probs=52.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
..++|++++|.|+ |.||+++++.+...|++|++.+|+.++.+... + .+.+. + + .++++++++ ..
T Consensus 151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~----~g~~~--~--~---~~~l~~~l~---~a 214 (293)
T 3d4o_A 151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-E----MGMEP--F--H---ISKAAQELR---DV 214 (293)
T ss_dssp SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H----TTSEE--E--E---GGGHHHHTT---TC
T ss_pred CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-H----CCCee--c--C---hhhHHHHhc---CC
Confidence 5789999999994 89999999999999999999999987654332 1 13222 1 2 123444443 78
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|+++++..
T Consensus 215 DvVi~~~p 222 (293)
T 3d4o_A 215 DVCINTIP 222 (293)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99999985
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.06 Score=50.17 Aligned_cols=78 Identities=23% Similarity=0.304 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeE-EEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARV-SILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V-~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.|++++|+|+ |++|...+..+...|+++ +.+++++++++.+ +++ |....+ ..+-.+..+..+.+...+..|+
T Consensus 160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~l----Ga~~~i-~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSF----GAMQTF-NSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT----TCSEEE-ETTTSCHHHHHHHHGGGCSSEE
T ss_pred CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHc----CCeEEE-eCCCCCHHHHHHhhcccCCccc
Confidence 6899999987 899999998888899874 6778887765543 222 433222 2222233344444445567899
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
++.++|
T Consensus 233 v~d~~G 238 (346)
T 4a2c_A 233 ILETAG 238 (346)
T ss_dssp EEECSC
T ss_pred cccccc
Confidence 999998
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.024 Score=52.65 Aligned_cols=114 Identities=18% Similarity=0.155 Sum_probs=65.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
..++.|+|+ |.+|..++..|+.+|. +|++.|.++++++....++.... ..++... . .+ .+.+...
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-------~~a~~~a 75 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-------YSDVKDC 75 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-------GGGGTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-------HHHhCCC
Confidence 357888998 9999999999999987 89999999877665555554321 1122211 1 11 2234579
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
|++|.++|..... ..+. .+.+..|..-...+++.+.++ .. .+.|+++|.
T Consensus 76 DvVii~~g~p~k~---g~~r---~dl~~~n~~i~~~i~~~i~~~----~p--~a~viv~tN 124 (318)
T 1y6j_A 76 DVIVVTAGANRKP---GETR---LDLAKKNVMIAKEVTQNIMKY----YN--HGVILVVSN 124 (318)
T ss_dssp SEEEECCCC---------CH---HHHHHHHHHHHHHHHHHHHHH----CC--SCEEEECSS
T ss_pred CEEEEcCCCCCCC---CcCH---HHHHHhhHHHHHHHHHHHHHh----CC--CcEEEEecC
Confidence 9999999964321 1122 234556655555555544443 21 456666544
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.015 Score=58.37 Aligned_cols=89 Identities=17% Similarity=0.269 Sum_probs=65.3
Q ss_pred CCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecC-------------------chhHHHHHHHHHhhc-C
Q 017757 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS-------------------GKKLEEAKQSIQLAT-G 86 (366)
Q Consensus 28 ~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~-~ 86 (366)
+.....++++++|+|.|+ ||+|.++++.|+..|. +++++|.+ ..+.+.+++.+++.. .
T Consensus 318 ~~~gq~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~ 396 (598)
T 3vh1_A 318 PDLNLDIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL 396 (598)
T ss_dssp TTCCHHHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTT
T ss_pred chhhHHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCC
Confidence 444446789999999995 8999999999999997 68899665 256777788887754 4
Q ss_pred CeEEEEEecCC--------------CHHHHHHHHHhcCCCcEEEEcCC
Q 017757 87 IEVATYSADVR--------------DFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 87 ~~v~~~~~Dls--------------~~~~v~~~~~~~~~id~vi~nAG 120 (366)
.++..+..++. +.+.+.++++ ..|+||.+..
T Consensus 397 v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~---~~DvVvdatD 441 (598)
T 3vh1_A 397 MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIK---EHDIIFLLVD 441 (598)
T ss_dssp CEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHH---HCSEEEECCS
T ss_pred cEEEEEeccccccCcccccccccccCHHHHHHHHh---cCCEEEECCC
Confidence 56777766541 2344555665 5799999864
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=96.05 E-value=0.014 Score=52.86 Aligned_cols=41 Identities=20% Similarity=0.203 Sum_probs=36.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
++||+++|.|+++-+|+.+|+.|.++|++|+++++....++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~ 188 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG 188 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH
Confidence 89999999999888999999999999999999987654443
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.043 Score=51.26 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=65.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|++++|+|+ |++|...+..+... |++|+.+++++++++.+. ++ +.+.. .|-.+ +..+++.+.. .++
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~l----Ga~~~---i~~~~-~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EV----GADAA---VKSGA-GAADAIRELTGGQGA 240 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HT----TCSEE---EECST-THHHHHHHHHGGGCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc----CCCEE---EcCCC-cHHHHHHHHhCCCCC
Confidence 5899999998 99999988777666 789999999988766442 22 33322 12222 2223332222 279
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
|+++.++|.. + ..+.+++.+++ .|+++.++...+
T Consensus 241 d~v~d~~G~~----------~---------------~~~~~~~~l~~-----~G~iv~~G~~~~ 274 (345)
T 3jv7_A 241 TAVFDFVGAQ----------S---------------TIDTAQQVVAV-----DGHISVVGIHAG 274 (345)
T ss_dssp EEEEESSCCH----------H---------------HHHHHHHHEEE-----EEEEEECSCCTT
T ss_pred eEEEECCCCH----------H---------------HHHHHHHHHhc-----CCEEEEECCCCC
Confidence 9999999841 1 23445555555 579999886543
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=95.96 E-value=0.029 Score=53.13 Aligned_cols=77 Identities=21% Similarity=0.267 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~--~~ 111 (366)
.|++++|+|+ |++|...+..+...|+ +|+.+++++++++.+. ++ +.+.. .|..+ .+++.+.+.+. ++
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~~v---i~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL----GATEC---LNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT----TCSEE---ECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc----CCcEE---EecccccchHHHHHHHHhCCC
Confidence 5899999995 9999999888888899 7999999988876543 22 33221 24332 11233323221 47
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 262 ~Dvvid~~g~ 271 (373)
T 1p0f_A 262 VDYAVECAGR 271 (373)
T ss_dssp BSEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.12 Score=48.12 Aligned_cols=117 Identities=15% Similarity=0.199 Sum_probs=71.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh--cCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA--TGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~--~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+..++.|+|| |.+|..++..|+.++. +|++.|+++++++....++... ...++.... | + .+.+..
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~-------~~a~~~ 76 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E-------YSDAKD 76 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C-------GGGGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C-------HHHhCC
Confidence 3468999998 9999999999999885 7999999988887666666432 112222222 2 2 122346
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
.|++|..+|..... ..+.. ..+..|.. +++.+.+.+.+... .+.|+++|--.
T Consensus 77 aDvVii~ag~~~k~---g~~R~---dl~~~n~~----i~~~i~~~i~~~~p--~a~iiv~tNPv 128 (326)
T 2zqz_A 77 ADLVVITAGAPQKP---GETRL---DLVNKNLK----ILKSIVDPIVDSGF--NGIFLVAANPV 128 (326)
T ss_dssp CSEEEECCCCC--------CHH---HHHHHHHH----HHHHHHHHHHHHTC--CSEEEECSSSH
T ss_pred CCEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHHHHCC--CeEEEEeCCcH
Confidence 89999999974321 12222 33444544 44444454444431 56777776543
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.17 Score=46.35 Aligned_cols=114 Identities=11% Similarity=0.101 Sum_probs=69.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++.|+|+ |.+|.+++..|+.+|. +|++.++++++++....++... .+........ +|. +.+...|
T Consensus 2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~-------~a~~~aD 71 (294)
T 1oju_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY-------SLLKGSE 71 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG-------GGGTTCS
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCH-------HHhCCCC
Confidence 5789998 9999999999999998 8999999998776333333321 1222221111 121 2234689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
++|.+||..... ..+..+ .++.|. -+++.+.+.+.+... .+.++.+|.-
T Consensus 72 iVViaag~~~kp---G~~R~d---l~~~N~----~i~~~i~~~i~~~~p--~a~iivvsNP 120 (294)
T 1oju_A 72 IIVVTAGLARKP---GMTRLD---LAHKNA----GIIKDIAKKIVENAP--ESKILVVTNP 120 (294)
T ss_dssp EEEECCCCCCCS---SCCHHH---HHHHHH----HHHHHHHHHHHTTST--TCEEEECSSS
T ss_pred EEEECCCCCCCC---CCcHHH---HHHHHH----HHHHHHHHHHHhhCC--CeEEEEeCCc
Confidence 999999975321 123333 355554 344555555555431 4667777643
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.089 Score=48.83 Aligned_cols=115 Identities=13% Similarity=0.220 Sum_probs=70.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.++.|+|| |.+|..++..|+.++. +|++.|+++++++....++.... ...+.... | + .+.+...|
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~-------~~a~~~aD 74 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E-------YSDCKDAD 74 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C-------GGGGTTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C-------HHHhCCCC
Confidence 57999998 9999999999999886 79999999888876666665431 12222222 2 1 22245789
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++|..+|...... .+ -.+.+..|.. +++.+.+.+.+.. ..+.++++|--.
T Consensus 75 vVii~ag~~~~~g---~~---R~dl~~~n~~----i~~~i~~~i~~~~--p~a~iiv~tNPv 124 (318)
T 1ez4_A 75 LVVITAGAPQKPG---ES---RLDLVNKNLN----ILSSIVKPVVDSG--FDGIFLVAANPV 124 (318)
T ss_dssp EEEECCCC----------------CHHHHHH----HHHHHHHHHHHTT--CCSEEEECSSSH
T ss_pred EEEECCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHHHhC--CCeEEEEeCCcH
Confidence 9999999743211 11 1123344443 4455555555543 256777776543
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.014 Score=55.10 Aligned_cols=84 Identities=21% Similarity=0.350 Sum_probs=64.9
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEE
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVA 90 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~ 90 (366)
..++++++|+|.|+ ||+|.++++.|+..|. ++.++|++. .+.+.+++.+.... ..++.
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~ 191 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVS 191 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEE
Confidence 45678999999996 8999999999999996 699998863 35666677776654 35788
Q ss_pred EEEecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 91 TYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 91 ~~~~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
.+..++++..++.+ +...|+||.+..
T Consensus 192 ~~~~~i~~~~~~~~----~~~~DlVvd~~D 217 (353)
T 3h5n_A 192 EIALNINDYTDLHK----VPEADIWVVSAD 217 (353)
T ss_dssp EEECCCCSGGGGGG----SCCCSEEEECCC
T ss_pred EeecccCchhhhhH----hccCCEEEEecC
Confidence 88888887654433 558899999764
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=95.75 E-value=0.017 Score=54.77 Aligned_cols=47 Identities=17% Similarity=0.228 Sum_probs=41.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHH
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI 81 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l 81 (366)
+++||+++|+|. |.+|..+|+.|.+.|++|++.+++.+++++..+++
T Consensus 170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ 216 (364)
T 1leh_A 170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 216 (364)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 799999999996 88999999999999999999999988777666553
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.02 Score=53.74 Aligned_cols=101 Identities=22% Similarity=0.237 Sum_probs=67.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|++++|+|+ |++|...+..+...|+ +|+++++++++++.+ +++ +.+. ..|.++.+-.+++.+.. .++
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l----Ga~~---vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY----GATD---IINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH----TCCE---EECGGGSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh----CCce---EEcCCCcCHHHHHHHHcCCCCC
Confidence 5889999985 9999999888888899 799999988776543 223 3322 23444433334444332 369
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
|+++.++|.. ...+.+++.+++ .|+++.++...
T Consensus 237 D~v~d~~g~~-------------------------~~~~~~~~~l~~-----~G~~v~~G~~~ 269 (352)
T 3fpc_A 237 DKVVIAGGDV-------------------------HTFAQAVKMIKP-----GSDIGNVNYLG 269 (352)
T ss_dssp EEEEECSSCT-------------------------THHHHHHHHEEE-----EEEEEECCCCC
T ss_pred CEEEECCCCh-------------------------HHHHHHHHHHhc-----CCEEEEecccC
Confidence 9999999842 123344555555 57999888643
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.73 E-value=0.019 Score=54.89 Aligned_cols=77 Identities=27% Similarity=0.287 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-c--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-A--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~--~~ 111 (366)
.|++++|+|+ |++|...+..+...|+ +|+++++++++++.+. ++ |.+ ..|.++.+.+.+.+.+ . .+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~----~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ----GFE----IADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT----TCE----EEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc----CCc----EEccCCcchHHHHHHHHhCCCC
Confidence 5899999995 9999999888888899 6899999888766542 22 433 2354443322222222 1 36
Q ss_pred CcEEEEcCCCC
Q 017757 112 VDVLVVNQGVF 122 (366)
Q Consensus 112 id~vi~nAG~~ 122 (366)
+|++|.++|..
T Consensus 255 ~Dvvid~~G~~ 265 (398)
T 1kol_A 255 VDCAVDAVGFE 265 (398)
T ss_dssp EEEEEECCCTT
T ss_pred CCEEEECCCCc
Confidence 99999999853
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.019 Score=54.98 Aligned_cols=76 Identities=29% Similarity=0.347 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCH----HHHHHHHHhcC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF----DAVKTALDEAG 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~----~~v~~~~~~~~ 110 (366)
.|++++|+|+ |++|...+..+...|+ +|+.+++++++++.+. ++ +.+ . .|..+. +.+.++.. -.
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~--~--i~~~~~~~~~~~~~~~~~-g~ 253 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DA----GFE--T--IDLRNSAPLRDQIDQILG-KP 253 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TT----TCE--E--EETTSSSCHHHHHHHHHS-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc----CCc--E--EcCCCcchHHHHHHHHhC-CC
Confidence 5899999996 9999999888877899 8999999988765432 22 432 2 354443 23333322 12
Q ss_pred CCcEEEEcCCCC
Q 017757 111 PVDVLVVNQGVF 122 (366)
Q Consensus 111 ~id~vi~nAG~~ 122 (366)
++|++|.++|..
T Consensus 254 g~Dvvid~~g~~ 265 (398)
T 2dph_A 254 EVDCGVDAVGFE 265 (398)
T ss_dssp CEEEEEECSCTT
T ss_pred CCCEEEECCCCc
Confidence 699999999853
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.026 Score=51.75 Aligned_cols=57 Identities=26% Similarity=0.290 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHcCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhH
Q 017757 15 PLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~ 74 (366)
+|.-.-++-+..+ ...+++||+++|.|++.-+|+.+|+.|.+.|++|+++++....+
T Consensus 146 PcTp~gi~~ll~~---~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L 202 (301)
T 1a4i_A 146 PCTPKGCLELIKE---TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL 202 (301)
T ss_dssp CHHHHHHHHHHHT---TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred CchHHHHHHHHHH---cCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccH
Confidence 4444443334432 23579999999999988899999999999999999998765443
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=95.63 E-value=0.082 Score=48.68 Aligned_cols=73 Identities=15% Similarity=0.255 Sum_probs=48.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++.|+|+ |.+|..++..|+.+|. +|++.++++++++....++.... ........ + +. +.+...|+
T Consensus 2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~--~~-------~a~~~aDv 70 (304)
T 2v6b_A 2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G--GH-------SELADAQV 70 (304)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E--CG-------GGGTTCSE
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C--CH-------HHhCCCCE
Confidence 6889998 9999999999999998 99999999877665444443221 01111111 1 21 22447899
Q ss_pred EEEcCCCC
Q 017757 115 LVVNQGVF 122 (366)
Q Consensus 115 vi~nAG~~ 122 (366)
+|.++|..
T Consensus 71 VIi~~~~~ 78 (304)
T 2v6b_A 71 VILTAGAN 78 (304)
T ss_dssp EEECC---
T ss_pred EEEcCCCC
Confidence 99999864
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.13 Score=44.20 Aligned_cols=76 Identities=13% Similarity=0.226 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCC-eEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGI-EVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.++++|-.|++.|. ++..+++.+.+|+.++.+++.++.+.+.+....-. ++.++..|+.+. +...+.+|+
T Consensus 55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~------~~~~~~~D~ 125 (204)
T 3njr_A 55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA------LADLPLPEA 125 (204)
T ss_dssp TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG------GTTSCCCSE
T ss_pred CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh------cccCCCCCE
Confidence 46789999976652 34445555899999999999888877776554333 689999998752 223357899
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
++.+.+
T Consensus 126 v~~~~~ 131 (204)
T 3njr_A 126 VFIGGG 131 (204)
T ss_dssp EEECSC
T ss_pred EEECCc
Confidence 997764
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.14 Score=47.50 Aligned_cols=115 Identities=10% Similarity=0.158 Sum_probs=69.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++.|+|+ |.+|..++..|+.+|. +|++.++++++++-...++... .+.++.....|. .+.+...|
T Consensus 2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~---------~~a~~~aD 71 (314)
T 3nep_X 2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND---------YGPTEDSD 71 (314)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS---------SGGGTTCS
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC---------HHHhCCCC
Confidence 4788996 9999999999999987 8999999998776555555432 122222221121 12345789
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
++|.+||..... -++-.+.++.|.. +.+.+.+.+.+.. ..+.++++|.-.
T Consensus 72 vVii~ag~~~kp------G~~R~dl~~~N~~----i~~~i~~~i~~~~--p~a~vivvtNPv 121 (314)
T 3nep_X 72 VCIITAGLPRSP------GMSRDDLLAKNTE----IVGGVTEQFVEGS--PDSTIIVVANPL 121 (314)
T ss_dssp EEEECCCC-------------CHHHHHHHHH----HHHHHHHHHHTTC--TTCEEEECCSSH
T ss_pred EEEECCCCCCCC------CCCHHHHHHhhHH----HHHHHHHHHHHhC--CCcEEEecCCch
Confidence 999999974321 1122344555554 4455555555543 156777777643
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=95.54 E-value=0.027 Score=51.29 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=38.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+++||+++|.|++.-+|+.+|+.|.+.|++|+++++....++
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~ 197 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR 197 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence 35799999999999888999999999999999999987765443
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.018 Score=56.47 Aligned_cols=73 Identities=21% Similarity=0.351 Sum_probs=59.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
+++|.|+ |-+|..+|+.|.++|++|++++++++.++.+.+.+ ++..+..|-++++.++++-- ...|++|..
T Consensus 5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Agi--~~ad~~ia~ 75 (461)
T 4g65_A 5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAGA--QDADMLVAV 75 (461)
T ss_dssp EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHTT--TTCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcCC--CcCCEEEEE
Confidence 5788886 88999999999999999999999998887765543 46678999999998887732 257888776
Q ss_pred CC
Q 017757 119 QG 120 (366)
Q Consensus 119 AG 120 (366)
.+
T Consensus 76 t~ 77 (461)
T 4g65_A 76 TN 77 (461)
T ss_dssp CS
T ss_pred cC
Confidence 54
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=95.47 E-value=0.015 Score=54.30 Aligned_cols=72 Identities=14% Similarity=0.136 Sum_probs=57.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
.+.++|.|+ |.+|+.++++|.++|. |++++++++..+ ..+ ..+..+..|.+|++.++++ ...+.|.++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------~~~~~i~gd~~~~~~L~~a--~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------SGANFVHGDPTRVSDLEKA--NVRGARAVI 182 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------TTCEEEESCTTSHHHHHHT--CSTTEEEEE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------CCcEEEEeCCCCHHHHHhc--ChhhccEEE
Confidence 567999996 8999999999999999 999999988766 332 2467899999999988876 123678888
Q ss_pred EcCC
Q 017757 117 VNQG 120 (366)
Q Consensus 117 ~nAG 120 (366)
...+
T Consensus 183 ~~~~ 186 (336)
T 1lnq_A 183 VDLE 186 (336)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 7764
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=95.33 E-value=0.27 Score=45.29 Aligned_cols=116 Identities=18% Similarity=0.199 Sum_probs=72.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+++.|+|| |.+|..++..|+.++ .+|++.|+++++++..+.++.... ..++.... | +. +.+...|
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~-------~a~~~aD 69 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SY-------GDLEGAR 69 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-------GGGTTEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CH-------HHhCCCC
Confidence 36889998 999999999999987 589999999888876666665421 12222222 2 21 1244789
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~ 176 (366)
++|..+|..... ..+..+ .+..|.. +++.+.+.+.+... .+.|+++|--..
T Consensus 70 ~Vii~ag~~~~~---g~~r~d---l~~~n~~----i~~~i~~~i~~~~p--~a~iiv~tNPv~ 120 (310)
T 2xxj_A 70 AVVLAAGVAQRP---GETRLQ---LLDRNAQ----VFAQVVPRVLEAAP--EAVLLVATNPVD 120 (310)
T ss_dssp EEEECCCCCCCT---TCCHHH---HHHHHHH----HHHHHHHHHHHHCT--TCEEEECSSSHH
T ss_pred EEEECCCCCCCC---CcCHHH---HHHhhHH----HHHHHHHHHHHHCC--CcEEEEecCchH
Confidence 999999975322 123332 3444444 44444555454431 567777765433
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=95.29 E-value=0.022 Score=52.56 Aligned_cols=68 Identities=15% Similarity=0.139 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|+++||+|| |++|...+..+...|++|+.++ ++++.+.+. ++ |.+..+ | | .+++ -+++|++
T Consensus 142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~l----Ga~~v~---~--d---~~~v---~~g~Dvv 203 (315)
T 3goh_A 142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KR----GVRHLY---R--E---PSQV---TQKYFAI 203 (315)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HH----TEEEEE---S--S---GGGC---CSCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-Hc----CCCEEE---c--C---HHHh---CCCccEE
Confidence 6899999999 9999999988888899999999 777766543 23 332222 2 2 2222 3579999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
+.++|.
T Consensus 204 ~d~~g~ 209 (315)
T 3goh_A 204 FDAVNS 209 (315)
T ss_dssp ECC---
T ss_pred EECCCc
Confidence 999984
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.017 Score=53.66 Aligned_cols=72 Identities=19% Similarity=0.202 Sum_probs=49.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVLV 116 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~vi 116 (366)
+++|+||+|++|..++..+...|++|+++++++++++.+. ++ +.+.. .|..+.+ .+.+++. +++|++|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l----Ga~~v---~~~~~~~--~~~~~~~~~~~~d~vi 222 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL----GASEV---ISREDVY--DGTLKALSKQQWQGAV 222 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH----TCSEE---EEHHHHC--SSCCCSSCCCCEEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CCcEE---EECCCch--HHHHHHhhcCCccEEE
Confidence 7999999999999999988889999999999988766543 23 32221 2322111 1111221 3689999
Q ss_pred EcCC
Q 017757 117 VNQG 120 (366)
Q Consensus 117 ~nAG 120 (366)
.++|
T Consensus 223 d~~g 226 (330)
T 1tt7_A 223 DPVG 226 (330)
T ss_dssp ESCC
T ss_pred ECCc
Confidence 9998
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.15 Score=46.97 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=51.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh---c--CCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA---T--GIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~--~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+++.|+|| |.+|..++..|+..|. +|+++++++++++....++... . ..++... .|. +.+..
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~----------~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NNY----------ADTAN 70 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SCG----------GGGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CCH----------HHHCC
Confidence 47899998 9999999999999996 8999999988777555555431 1 1223221 221 22347
Q ss_pred CcEEEEcCCCCC
Q 017757 112 VDVLVVNQGVFV 123 (366)
Q Consensus 112 id~vi~nAG~~~ 123 (366)
.|++|.++|...
T Consensus 71 aD~Vi~a~g~p~ 82 (309)
T 1ur5_A 71 SDVIVVTSGAPR 82 (309)
T ss_dssp CSEEEECCCC--
T ss_pred CCEEEEcCCCCC
Confidence 899999999743
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.24 Score=45.81 Aligned_cols=114 Identities=16% Similarity=0.174 Sum_probs=68.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHC-C--CeEEEEecCchhHHHHHHHHHhhcCC--eEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 39 HVFITGGSSGIGLALAHQAAKE-G--ARVSILARSGKKLEEAKQSIQLATGI--EVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~-G--~~V~l~~r~~~~~~~~~~~l~~~~~~--~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++.|+||+|.+|.+++..|+.+ + .+++++++++ +.+-...+++.. .. ++..+.. -.+. + .+...|
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~-~~~~~v~~~~~-~~~~----~---~~~~aD 71 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-PTAVKIKGFSG-EDAT----P---ALEGAD 71 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS-CSSEEEEEECS-SCCH----H---HHTTCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC-CCCceEEEecC-CCcH----H---HhCCCC
Confidence 5789999999999999999886 4 5799999987 444334444432 22 2222211 0111 1 223689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
++|..||..... ..+. .+.++.|..-.-.+.+.+.++ .. .+.++.+|.-
T Consensus 72 ivii~ag~~rkp---G~~R---~dll~~N~~I~~~i~~~i~~~----~p--~a~vlvvtNP 120 (312)
T 3hhp_A 72 VVLISAGVARKP---GMDR---SDLFNVNAGIVKNLVQQVAKT----CP--KACIGIITNP 120 (312)
T ss_dssp EEEECCSCSCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH----CT--TSEEEECSSC
T ss_pred EEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH----CC--CcEEEEecCc
Confidence 999999975321 1233 446666765555555544433 21 4577777653
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.028 Score=50.55 Aligned_cols=70 Identities=21% Similarity=0.316 Sum_probs=53.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.+++| +++|.|+ |++|+++++.|.+.|++|++++|+.++.++..+++. .. ..+ ++++ + ..
T Consensus 113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~----~~-------~~~---~~~~-~---~~ 172 (263)
T 2d5c_A 113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG----LR-------AVP---LEKA-R---EA 172 (263)
T ss_dssp CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT----CE-------ECC---GGGG-G---GC
T ss_pred CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cc-------hhh---Hhhc-c---CC
Confidence 46788 9999996 889999999999999999999999887776665442 22 112 2222 2 58
Q ss_pred cEEEEcCCCC
Q 017757 113 DVLVVNQGVF 122 (366)
Q Consensus 113 d~vi~nAG~~ 122 (366)
|++|++....
T Consensus 173 Divi~~tp~~ 182 (263)
T 2d5c_A 173 RLLVNATRVG 182 (263)
T ss_dssp SEEEECSSTT
T ss_pred CEEEEccCCC
Confidence 9999998764
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.11 Score=48.43 Aligned_cols=76 Identities=25% Similarity=0.262 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|.+++|+|+ |++|...+..+... |++|+.+++++++++.+. ++ +.... .|-++.+..+++.+.. ..+
T Consensus 163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~----Ga~~~---i~~~~~~~~~~v~~~t~g~g~ 233 (348)
T 4eez_A 163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KI----GADVT---INSGDVNPVDEIKKITGGLGV 233 (348)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HT----TCSEE---EEC-CCCHHHHHHHHTTSSCE
T ss_pred CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hc----CCeEE---EeCCCCCHHHHhhhhcCCCCc
Confidence 5889999987 78888777777765 789999999988755332 22 33322 3444444444444433 257
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|.++.+++
T Consensus 234 d~~~~~~~ 241 (348)
T 4eez_A 234 QSAIVCAV 241 (348)
T ss_dssp EEEEECCS
T ss_pred eEEEEecc
Confidence 88888887
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.032 Score=52.72 Aligned_cols=43 Identities=9% Similarity=0.209 Sum_probs=36.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHH
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAK 78 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~ 78 (366)
++++++.|.| .|-+|..+|+.|++.|++|++.+|++++.+++.
T Consensus 20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~ 62 (358)
T 4e21_A 20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALE 62 (358)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 4567888998 699999999999999999999999988766554
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=95.14 E-value=0.038 Score=50.17 Aligned_cols=43 Identities=23% Similarity=0.379 Sum_probs=37.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCchhH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKE--GARVSILARSGKKL 74 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~~~~ 74 (366)
..+++||+++|.|++.-+|+-+|+.|.++ |++|+++.|+...+
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L 197 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDL 197 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCH
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHH
Confidence 35799999999999888899999999999 89999998776443
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=95.11 E-value=0.23 Score=45.47 Aligned_cols=113 Identities=12% Similarity=0.104 Sum_probs=69.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++.|+|+ |++|..+|..|..++. ++++.|.+++..+-.+.++... .+........+ |. +....-|
T Consensus 2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~-------~~~~~aD 71 (294)
T 2x0j_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY-------SLLKGSE 71 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG-------GGGTTCS
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH-------HHhCCCC
Confidence 4678895 9999999999998874 6999999987766555555432 12222222211 11 1234689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
++|..||..... .++.++ .++.|.. +.+.+.+.+.+... .+.++.+|.
T Consensus 72 vVvitAG~prkp---GmtR~d---Ll~~Na~----I~~~i~~~i~~~~p--~aivlvvsN 119 (294)
T 2x0j_A 72 IIVVTAGLARKP---GMTRLD---LAHKNAG----IIKDIAKKIVENAP--ESKILVVTN 119 (294)
T ss_dssp EEEECCCCCCCS---SSCHHH---HHHHHHH----HHHHHHHHHHTTST--TCEEEECSS
T ss_pred EEEEecCCCCCC---CCchHH---HHHHHHH----HHHHHHHHHHhcCC--ceEEEEecC
Confidence 999999975432 134443 5666655 45555555555432 456666665
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.03 E-value=0.064 Score=52.27 Aligned_cols=80 Identities=23% Similarity=0.202 Sum_probs=53.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC-
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP- 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~- 111 (366)
+++++|.++|.|. |+.|.++|+.|.++|++|.+.|++........+.++.. +.++ ....-. + +.+ ..
T Consensus 5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~-gi~~--~~g~~~--~---~~~---~~~ 72 (451)
T 3lk7_A 5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE-GIKV--VCGSHP--L---ELL---DED 72 (451)
T ss_dssp CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT-TCEE--EESCCC--G---GGG---GSC
T ss_pred hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC-CCEE--EECCCh--H---Hhh---cCC
Confidence 5678999999998 88999999999999999999999754222233444433 3333 221111 1 111 23
Q ss_pred CcEEEEcCCCCCC
Q 017757 112 VDVLVVNQGVFVP 124 (366)
Q Consensus 112 id~vi~nAG~~~~ 124 (366)
.|.||.+.|+...
T Consensus 73 ~d~vv~spgi~~~ 85 (451)
T 3lk7_A 73 FCYMIKNPGIPYN 85 (451)
T ss_dssp EEEEEECTTSCTT
T ss_pred CCEEEECCcCCCC
Confidence 7999999998543
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=94.93 E-value=0.27 Score=45.31 Aligned_cols=111 Identities=13% Similarity=0.152 Sum_probs=68.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHC--CCeEEEEecCchhHHHHHHHHHhh-----cCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKE--GARVSILARSGKKLEEAKQSIQLA-----TGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~--G~~V~l~~r~~~~~~~~~~~l~~~-----~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
++.|+|+ |.+|..++..|+++ |.+|++.++++++++....++... ...++.. ..| . +.+..
T Consensus 2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d---~-------~~l~~ 69 (310)
T 1guz_A 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-SND---Y-------ADTAN 69 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ESC---G-------GGGTT
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-CCC---H-------HHHCC
Confidence 5788998 99999999999996 789999999988777554333221 1112221 122 1 12347
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
.|++|.+++..... ..+ ..+.++.|..-...+.+.+.++. + .+.++.++.
T Consensus 70 aDvViiav~~p~~~---g~~---r~dl~~~n~~i~~~i~~~i~~~~-~-----~~~viv~tN 119 (310)
T 1guz_A 70 SDIVIITAGLPRKP---GMT---REDLLMKNAGIVKEVTDNIMKHS-K-----NPIIIVVSN 119 (310)
T ss_dssp CSEEEECCSCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHC-S-----SCEEEECCS
T ss_pred CCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHhC-C-----CcEEEEEcC
Confidence 89999999853221 112 22455566655555555555441 1 457777654
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.23 Score=44.97 Aligned_cols=84 Identities=20% Similarity=0.288 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHH-CCCeEE-EEecCchhH--HHHH-------------HHHHhhcCCeEEEEEecCCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAK-EGARVS-ILARSGKKL--EEAK-------------QSIQLATGIEVATYSADVRD 98 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~-~G~~V~-l~~r~~~~~--~~~~-------------~~l~~~~~~~v~~~~~Dls~ 98 (366)
+.-++.|+|++|.+|+.+++.+.+ .|++|+ +++++.+.. +++. ..+..... .+ -+..|++.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~-~~-DvVIDft~ 81 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-DF-DVFIDFTR 81 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-SC-SEEEECSC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc-CC-CEEEEcCC
Confidence 334799999999999999999885 477766 566654320 0000 00000000 11 23458888
Q ss_pred HHHHHHHHHhc--CCCcEEEEcCCC
Q 017757 99 FDAVKTALDEA--GPVDVLVVNQGV 121 (366)
Q Consensus 99 ~~~v~~~~~~~--~~id~vi~nAG~ 121 (366)
++...+.++.. .++++++-..|.
T Consensus 82 p~~~~~~~~~a~~~G~~vVigTtG~ 106 (273)
T 1dih_A 82 PEGTLNHLAFCRQHGKGMVIGTTGF 106 (273)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred hHHHHHHHHHHHhCCCCEEEECCCC
Confidence 88877666542 467788777763
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=94.84 E-value=0.38 Score=44.35 Aligned_cols=74 Identities=16% Similarity=0.214 Sum_probs=51.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh-----cCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA-----TGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~-----~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+++.|+|+ |.+|.++|..|++.|. +|++.++++++++....++... ...++.. ..|. +.+..
T Consensus 5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~----------~a~~~ 72 (317)
T 2ewd_A 5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDDY----------ADISG 72 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESCG----------GGGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCCH----------HHhCC
Confidence 57889997 9999999999999998 9999999988777543222211 1222321 1221 22347
Q ss_pred CcEEEEcCCCCC
Q 017757 112 VDVLVVNQGVFV 123 (366)
Q Consensus 112 id~vi~nAG~~~ 123 (366)
.|++|.++|...
T Consensus 73 aDiVi~avg~p~ 84 (317)
T 2ewd_A 73 SDVVIITASIPG 84 (317)
T ss_dssp CSEEEECCCCSS
T ss_pred CCEEEEeCCCCC
Confidence 899999998654
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.2 Score=45.48 Aligned_cols=44 Identities=20% Similarity=0.316 Sum_probs=37.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC---eEEEEecCchhHHHHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGKKLEEAKQS 80 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~---~V~l~~r~~~~~~~~~~~ 80 (366)
+.+++.|.|+ |-+|.++++.|++.|+ +|++.+|+++++++..++
T Consensus 2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~ 48 (280)
T 3tri_A 2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK 48 (280)
T ss_dssp CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH
Confidence 3467888886 9999999999999998 899999999888777654
|
| >1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=94.82 E-value=0.26 Score=48.29 Aligned_cols=78 Identities=17% Similarity=0.218 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC-----CCeEEEEecCchhHHHHHHHHHhh---c--CCeEEEEEecCCCHHHHHH
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKE-----GARVSILARSGKKLEEAKQSIQLA---T--GIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~-----G~~V~l~~r~~~~~~~~~~~l~~~---~--~~~v~~~~~Dls~~~~v~~ 104 (366)
++.+++.|.||++..|.+++..|+++ +.+|++.++++++++...+..... . ..++.. . +| .++
T Consensus 26 m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~-t---~D---~~e 98 (472)
T 1u8x_X 26 KKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-T---TD---PEE 98 (472)
T ss_dssp CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-E---SC---HHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEE-E---CC---HHH
Confidence 34568889999888899999999998 668999999998877643322211 1 223332 1 23 223
Q ss_pred HHHhcCCCcEEEEcCCCC
Q 017757 105 ALDEAGPVDVLVVNQGVF 122 (366)
Q Consensus 105 ~~~~~~~id~vi~nAG~~ 122 (366)
.++ ..|+||..+|..
T Consensus 99 al~---~AD~VViaag~~ 113 (472)
T 1u8x_X 99 AFT---DVDFVMAHIRVG 113 (472)
T ss_dssp HHS---SCSEEEECCCTT
T ss_pred HHc---CCCEEEEcCCCc
Confidence 333 689999999864
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=94.78 E-value=0.1 Score=50.30 Aligned_cols=73 Identities=15% Similarity=0.161 Sum_probs=56.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.+-+.+|+++|.|+ |.+|+.+++.+.+.|.+|++++.++..... .+ .. ..+..|..|.+.+.++++ +
T Consensus 30 ~~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~---~~----ad--~~~~~~~~d~~~l~~~a~---~ 96 (419)
T 4e4t_A 30 SPILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG---AV----AD--RHLRAAYDDEAALAELAG---L 96 (419)
T ss_dssp CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH---HH----SS--EEECCCTTCHHHHHHHHH---H
T ss_pred ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh---hh----CC--EEEECCcCCHHHHHHHHh---c
Confidence 35678999999996 679999999999999999999876653221 11 11 245689999999999996 5
Q ss_pred CcEEEE
Q 017757 112 VDVLVV 117 (366)
Q Consensus 112 id~vi~ 117 (366)
+|+++.
T Consensus 97 ~D~V~~ 102 (419)
T 4e4t_A 97 CEAVST 102 (419)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 898873
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.46 Score=44.11 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=52.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh---c--CCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA---T--GIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~--~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+++.|+|| |.+|..+|..|+..|. +|++.++++++++.....+... . ..++.. ..|. +.+..
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d~----------~al~~ 82 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENNY----------EYLQN 82 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESCG----------GGGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCCH----------HHHCC
Confidence 57889998 9999999999999998 9999999998877544333321 1 223332 1221 22447
Q ss_pred CcEEEEcCCCCC
Q 017757 112 VDVLVVNQGVFV 123 (366)
Q Consensus 112 id~vi~nAG~~~ 123 (366)
.|++|.++|...
T Consensus 83 aD~VI~avg~p~ 94 (328)
T 2hjr_A 83 SDVVIITAGVPR 94 (328)
T ss_dssp CSEEEECCSCCC
T ss_pred CCEEEEcCCCCC
Confidence 899999999654
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.23 Score=45.78 Aligned_cols=112 Identities=17% Similarity=0.264 Sum_probs=69.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh---cC--CeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA---TG--IEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~~--~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++.|+|| |.+|..++..++.+|. +|++.|+++++++....++... .+ .++... .| . +.+...
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~-------~a~~~a 68 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NS---Y-------EDMRGS 68 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G-------GGGTTC
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CC---H-------HHhCCC
Confidence 3678998 9999999999999887 6999999988877655555432 12 223221 22 1 224478
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
|++|..+|...... .+.. +.+..|.. +.+.+.+.+.+.. ..+.++++|.-
T Consensus 69 D~Vi~~ag~~~k~G---~~r~---dl~~~n~~----i~~~i~~~i~~~~--p~a~iiv~tNP 118 (308)
T 2d4a_B 69 DIVLVTAGIGRKPG---MTRE---QLLEANAN----TMADLAEKIKAYA--KDAIVVITTNP 118 (308)
T ss_dssp SEEEECCSCCCCSS---CCTH---HHHHHHHH----HHHHHHHHHHHHC--TTCEEEECCSS
T ss_pred CEEEEeCCCCCCCC---CcHH---HHHHHHHH----HHHHHHHHHHHHC--CCeEEEEeCCc
Confidence 99999999754221 1222 23344433 4455555555433 14677777653
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=0.12 Score=46.13 Aligned_cols=75 Identities=19% Similarity=0.218 Sum_probs=53.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVL 115 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~v 115 (366)
++.|.|++|.+|+.+++.+.+. |++++.+....+.+++... . ..+ +..|+|.++.+.+.++.. .++++|
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~-~~D---vvIDfT~p~a~~~~~~~a~~~g~~~V 73 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----G-NTE---VVIDFTHPDVVMGNLEFLIDNGIHAV 73 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----T-TCC---EEEECSCTTTHHHHHHHHHHTTCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----c-CCc---EEEEccChHHHHHHHHHHHHcCCCEE
Confidence 5899999999999999999876 8888755443444443321 1 222 567999998887776552 468999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
+-..|.
T Consensus 74 igTTG~ 79 (245)
T 1p9l_A 74 VGTTGF 79 (245)
T ss_dssp ECCCCC
T ss_pred EcCCCC
Confidence 988874
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=0.063 Score=49.18 Aligned_cols=43 Identities=28% Similarity=0.471 Sum_probs=37.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQS 80 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~ 80 (366)
-+++.|.|+ |.+|.++|..|++.|++|++.+|++++++...+.
T Consensus 15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~ 57 (302)
T 1f0y_A 15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG 57 (302)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 367899997 9999999999999999999999999887765443
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=94.68 E-value=0.38 Score=44.58 Aligned_cols=74 Identities=16% Similarity=0.209 Sum_probs=52.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh---c--CCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA---T--GIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~--~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+++.|+|| |.+|..++..|+.+|. +|++.|+++++++.....+... . ..++.. ..|. +.+..
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d~----------~al~~ 72 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNTY----------DDLAG 72 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECCG----------GGGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-CCCH----------HHhCC
Confidence 47889998 9999999999999998 8999999998877655555432 1 222322 1221 22447
Q ss_pred CcEEEEcCCCCC
Q 017757 112 VDVLVVNQGVFV 123 (366)
Q Consensus 112 id~vi~nAG~~~ 123 (366)
.|++|.++|...
T Consensus 73 aD~Vi~a~g~p~ 84 (322)
T 1t2d_A 73 ADVVIVTAGFTK 84 (322)
T ss_dssp CSEEEECCSCSS
T ss_pred CCEEEEeCCCCC
Confidence 899999999643
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.88 Score=41.91 Aligned_cols=114 Identities=11% Similarity=0.173 Sum_probs=68.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcC---CeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATG---IEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~---~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.+++.|+|+ |.+|..++..|+.+|. +|++.|+++++++....++..... ..+.... | + .+.+..
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~-------~~al~~ 74 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D-------YDDCRD 74 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C-------GGGTTT
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c-------HHHhCC
Confidence 468999998 9999999999999874 799999998766654444543211 1232222 2 1 122447
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
.|+||.++|....... +.. +.+..| .-+.+.+.+.+.+... .+.++++|-
T Consensus 75 aDvViia~~~~~~~g~---~r~---dl~~~n----~~i~~~i~~~i~~~~p--~a~~iv~tN 124 (316)
T 1ldn_A 75 ADLVVICAGANQKPGE---TRL---DLVDKN----IAIFRSIVESVMASGF--QGLFLVATN 124 (316)
T ss_dssp CSEEEECCSCCCCTTT---CSG---GGHHHH----HHHHHHHHHHHHHHTC--CSEEEECSS
T ss_pred CCEEEEcCCCCCCCCC---CHH---HHHHcC----hHHHHHHHHHHHHHCC--CCEEEEeCC
Confidence 8999999997543221 111 123334 3345555555555431 455665544
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=94.65 E-value=0.57 Score=43.23 Aligned_cols=74 Identities=20% Similarity=0.266 Sum_probs=51.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++.|+|+ |.+|.+++..|++.|. +|++.++++++++.....+.... ........ ++.+ .+...|+
T Consensus 2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~-------~~~~aDv 70 (319)
T 1a5z_A 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA-------DLKGSDV 70 (319)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG-------GGTTCSE
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH-------HhCCCCE
Confidence 5789998 9999999999999998 99999999887776554443211 11111111 2321 2347899
Q ss_pred EEEcCCCCC
Q 017757 115 LVVNQGVFV 123 (366)
Q Consensus 115 vi~nAG~~~ 123 (366)
+|.+++...
T Consensus 71 Viiav~~~~ 79 (319)
T 1a5z_A 71 VIVAAGVPQ 79 (319)
T ss_dssp EEECCCCCC
T ss_pred EEEccCCCC
Confidence 999998644
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=94.61 E-value=0.069 Score=48.54 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=38.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI 81 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l 81 (366)
-+++.|.|+ |.+|..+|..|++.|++|++.+|+++.+++..+.+
T Consensus 4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 47 (283)
T 4e12_A 4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF 47 (283)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence 367888885 88999999999999999999999999888777664
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=94.59 E-value=0.062 Score=47.24 Aligned_cols=77 Identities=21% Similarity=0.247 Sum_probs=52.4
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
|...+++||.+||.|| |.+|...++.|.+.|++|++++.+... + .+++... .++.++.-+.... .+
T Consensus 24 Pifl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~--~-l~~l~~~--~~i~~i~~~~~~~--------dL 89 (223)
T 3dfz_A 24 TVMLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSA--E-INEWEAK--GQLRVKRKKVGEE--------DL 89 (223)
T ss_dssp EEEECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCH--H-HHHHHHT--TSCEEECSCCCGG--------GS
T ss_pred ccEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCH--H-HHHHHHc--CCcEEEECCCCHh--------Hh
Confidence 4556899999999996 689999999999999999999886542 1 2222222 2444444333321 13
Q ss_pred CCCcEEEEcCC
Q 017757 110 GPVDVLVVNQG 120 (366)
Q Consensus 110 ~~id~vi~nAG 120 (366)
...|.||-+.+
T Consensus 90 ~~adLVIaAT~ 100 (223)
T 3dfz_A 90 LNVFFIVVATN 100 (223)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46788887765
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=94.57 E-value=0.049 Score=49.39 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.+++++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+++. .. +..++. ....|+
T Consensus 118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~----~~---~~~~~~-----------~~~~Di 178 (271)
T 1npy_A 118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG----YA---YINSLE-----------NQQADI 178 (271)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT----CE---EESCCT-----------TCCCSE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC----Cc---cchhhh-----------cccCCE
Confidence 5788999995 8999999999999997 79999999988888776653 11 111110 236899
Q ss_pred EEEcCCCCC
Q 017757 115 LVVNQGVFV 123 (366)
Q Consensus 115 vi~nAG~~~ 123 (366)
|||+.....
T Consensus 179 vInaTp~gm 187 (271)
T 1npy_A 179 LVNVTSIGM 187 (271)
T ss_dssp EEECSSTTC
T ss_pred EEECCCCCc
Confidence 999976543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 366 | ||||
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 1e-35 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 6e-35 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 3e-33 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 8e-33 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 3e-32 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 2e-31 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 3e-31 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 7e-31 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 2e-30 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 2e-30 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 5e-30 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 1e-29 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 2e-29 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 3e-29 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 4e-29 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 4e-29 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 7e-29 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 5e-28 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 7e-28 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 9e-28 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 9e-28 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 3e-27 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 4e-27 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 5e-27 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 2e-26 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 3e-26 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 3e-26 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 6e-26 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 2e-25 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 8e-25 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 4e-24 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 1e-23 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 3e-23 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 7e-23 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 1e-22 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 2e-22 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 4e-22 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 7e-22 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 8e-22 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 9e-22 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 1e-21 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 1e-21 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 2e-21 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-21 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 3e-21 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 4e-21 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 5e-21 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-20 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 1e-20 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 1e-19 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 2e-19 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 2e-18 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 5e-18 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-17 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 4e-17 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-16 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 4e-15 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-14 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 1e-13 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 2e-13 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 4e-10 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 1e-09 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 5e-09 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 6e-09 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 5e-08 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 6e-08 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-07 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 6e-07 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 1e-06 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 6e-06 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 7e-06 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-06 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-05 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 2e-05 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-05 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 6e-05 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-04 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 2e-04 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 2e-04 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 3e-04 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 5e-04 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 8e-04 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.001 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 0.002 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 0.003 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 0.003 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 0.003 |
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 1e-35
Identities = 52/266 (19%), Positives = 94/266 (35%), Gaps = 45/266 (16%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ-LATGIEVATYSA 94
+DR +TG S GIG A+A ++G +V AR+ +EE + + Y
Sbjct: 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRC 68
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+ + + + + VD+ + N G+ P L S + M +VN+
Sbjct: 69 DLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICT 128
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+ A +K+R I ++S +G H S
Sbjct: 129 REAYQSMKERNVDD-GHIININSMSGH--------------------RVLPLSVTHFYS- 166
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTETPGLEEENK 268
A+K+ + L E L+QE+ I + I P ET + +
Sbjct: 167 ----------------ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD 210
Query: 269 RRPRLTSIIAASSGAMKADEVAKKAL 294
+ P + +K ++VA+ +
Sbjct: 211 KDPEKAAATYEQMKCLKPEDVAEAVI 236
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 6e-35
Identities = 59/294 (20%), Positives = 102/294 (34%), Gaps = 61/294 (20%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT 91
R + V ITG GIG A++ AK +++ + + LEE + G +V T
Sbjct: 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCK-GLGAKVHT 60
Query: 92 YSADVRDFDAVKTA----LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF 147
+ D + + + ++ E G V +LV N GV +L ++ +VN+ F
Sbjct: 61 FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 120
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHV 207
KA LP + K +G I ++S AG S Y
Sbjct: 121 WTTKAFLPAMTKNNHG---HIVTVASAAGH-------------------VSVPFLLAYC- 157
Query: 208 TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA---DDIHVSLIFPPDTETPGLE 264
+SKF G + L E+ A + + + P T ++
Sbjct: 158 -------------------SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK 198
Query: 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGI-KSGSFIVPCNSEGFLLSIAT 317
+ ++ +EV + + GI I +S FL ++
Sbjct: 199 NPSTSLGPT----------LEPEEVVNRLMHGILTEQKMIFIPSSIAFLTTLER 242
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 3e-33
Identities = 40/262 (15%), Positives = 80/262 (30%), Gaps = 48/262 (18%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ R V +TG GIG GARV ++R+ L+ + +
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCV 59
Query: 95 DVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
D+ D++A + AL GPVD+LV N V + + + +VN+ + +
Sbjct: 60 DLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVA 119
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
+ R + +
Sbjct: 120 RGLIAR-----------------------------------------GVPGAIVNVSSQC 138
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274
Q + ++ ++K L L + + E+ I V+ + P T + +
Sbjct: 139 SQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAK 198
Query: 275 SIIAASS--GAMKADEVAKKAL 294
+++ + + V L
Sbjct: 199 TMLNRIPLGKFAEVEHVVNAIL 220
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 120 bits (303), Expect = 8e-33
Identities = 58/240 (24%), Positives = 91/240 (37%), Gaps = 53/240 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ V +TGG+ GIG A+A A+EGA V++ + E A+ I A + D
Sbjct: 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA-------IGGAFFQVD 56
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ D ++EA G VDVLV N + PG L E R +++VN+T H+
Sbjct: 57 LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA 116
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A ++K G +I ++S G + + Y+
Sbjct: 117 LAAREMRKV---GGGAIVNVASVQGLFA-------------------EQENAAYN----- 149
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
ASK GL L +L ++ I V+ + P T + E P
Sbjct: 150 ---------------ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP 194
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 119 bits (299), Expect = 3e-32
Identities = 53/265 (20%), Positives = 91/265 (34%), Gaps = 51/265 (19%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
KD+ ITGG++GIG A+A + A EGA ++I EA G V T D
Sbjct: 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR---NLGRRVLTVKCD 60
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V V+ + G D+LV N G++ + + ++ + ++N+ F M K
Sbjct: 61 VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 120
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A +P +K+ G ++ +
Sbjct: 121 AFVPGMKRNGWGRIINLTSTTYWLKIEAYT------------------------------ 150
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE--NKR 269
+I++K G AL ++ D I V+ I P T E +
Sbjct: 151 ------------HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM 198
Query: 270 RPRLTSIIAASSGAMKADEVAKKAL 294
L +++ A ++ A
Sbjct: 199 FDVLPNMLQAIPRLQVPLDLTGAAA 223
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 117 bits (293), Expect = 2e-31
Identities = 46/281 (16%), Positives = 92/281 (32%), Gaps = 59/281 (20%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ +++V GIGL + + K + ++ + + + + + ++
Sbjct: 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62
Query: 95 DVRDFDA-----VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV A +K D+ VD+L+ G+ ++E I +N TG +
Sbjct: 63 DVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIE--------RTIAINFTGLVNT 114
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
A L KR+ G IA + S G ++ Y
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTG-------------------FNAIHQVPVYS--- 152
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN-- 267
ASK + +L + + I P T TP + N
Sbjct: 153 -----------------ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW 195
Query: 268 -KRRPRLTSIIAASSGAMKADEVAK---KALDGIKSGSFIV 304
PR+ ++ + +++ + KA++ K+G+
Sbjct: 196 LDVEPRVAELLLSHPT-QTSEQCGQNFVKAIEANKNGAIWK 235
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 117 bits (293), Expect = 3e-31
Identities = 51/269 (18%), Positives = 89/269 (33%), Gaps = 49/269 (18%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT 91
R +K + V +TGG+ GIG A+ + A GA + AR+ +L E Q G +V
Sbjct: 3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ-KKGFQVTG 61
Query: 92 YSADVRDFDAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGS 146
D + + G +D+L+ N G + ++ I N+ +
Sbjct: 62 SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESA 121
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYH 206
+H+ + A PL+K G ++ ++
Sbjct: 122 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGS------------------------- 156
Query: 207 VTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266
++ A+K L LA L E +D I + + P TP E
Sbjct: 157 -----------------IYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV 199
Query: 267 NKRRPRLTSIIAASSGAM-KADEVAKKAL 294
+ I G + +EV+
Sbjct: 200 YDDEFKKVVISRKPLGRFGEPEEVSSLVA 228
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 115 bits (290), Expect = 7e-31
Identities = 61/264 (23%), Positives = 97/264 (36%), Gaps = 51/264 (19%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ V ITGG+ G+G A QA GARV + ++ + + G D
Sbjct: 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLD 59
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + + + A G VD LV N G+ LE +S++ R ++++N+TG F +K
Sbjct: 60 VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+P +K G SI +SS AG Y
Sbjct: 120 TVIPAMKDAGGG---SIVNISSAAGLMGLAL-------------------TSSYGA---- 153
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN-KRR 270
SK+G+RGL++ E+ D I V+ + P T TP E ++
Sbjct: 154 ----------------SKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG 197
Query: 271 PRLTSIIAASSGAMKADEVAKKAL 294
+ E+A +
Sbjct: 198 EGNYPNTPMGRVGNEPGEIAGAVV 221
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 115 bits (288), Expect = 2e-30
Identities = 56/278 (20%), Positives = 91/278 (32%), Gaps = 61/278 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--TGIEVATYS 93
++ ITG S+GIG A A A+EGA+V+I R ++LEE +Q I A + V +
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGE----LEVQSLDEVRLMIDVNITG 145
ADV L G +D+LV N G +P QS++ +++N+
Sbjct: 64 ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY 205
+ K A+P + G
Sbjct: 124 VIALTKKAVPHLSS------------------------------------------TKGE 141
Query: 206 HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---- 261
V SG + +K + ++I I V+ I P T
Sbjct: 142 IVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA 201
Query: 262 -GLEEENKRRPRLTSIIAASSGAMK----ADEVAKKAL 294
G+ EE ++ T ++A+
Sbjct: 202 MGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA 239
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 115 bits (288), Expect = 2e-30
Identities = 53/278 (19%), Positives = 96/278 (34%), Gaps = 61/278 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--TGIEVATYS 93
++ V ITG S+GIG A A+EGA V+I RS ++LEE +Q I + + +V +
Sbjct: 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEV----QSLDEVRLMIDVNITG 145
ADV D ++ G +DVLV N G +P Q +D + +N+
Sbjct: 64 ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123
Query: 146 SFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY 205
M K P + + ++++ Q +
Sbjct: 124 VIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYA--------------------- 162
Query: 206 HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---G 262
+K L + ++ I V+ + P ET
Sbjct: 163 ---------------------IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNA 201
Query: 263 LEEENKRRPRLTSIIAASSGAM------KADEVAKKAL 294
+ ++ + + +A+ + K + +A L
Sbjct: 202 MGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 239
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 113 bits (284), Expect = 5e-30
Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 48/238 (20%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT 91
R ++ +TGGS GIG + + A GA V +R+ K+L + + + G +V
Sbjct: 3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR-SKGFKVEA 61
Query: 92 YSADVRDFDAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGS 146
D+ + ++ G +++LV N G+ + E + ++++ L++ +N +
Sbjct: 62 SVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAA 121
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYH 206
+H+ A P +K + G I+ +S +
Sbjct: 122 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYG---------------------- 159
Query: 207 VTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264
A+K + L L E D+I V+ + P T +E
Sbjct: 160 --------------------ATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVE 197
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 112 bits (281), Expect = 1e-29
Identities = 58/266 (21%), Positives = 102/266 (38%), Gaps = 50/266 (18%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITGG+ GIGLA+A + +EGA+V I R E+A +S+ T ++ + D
Sbjct: 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV--GTPDQIQFFQHD 62
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
D D D GPV LV N G+ V +E + E R ++ VN+ G F +
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+ +K + G MSS G G Y+
Sbjct: 123 LGIQRMKNKGLGASIIN--MSSIEGF-------------------VGDPSLGAYN----- 156
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA--DDIHVSLIFPPDTETPGLEEENKR 269
ASK +R ++++ + D+ V+ + P +TP +++
Sbjct: 157 ---------------ASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA 201
Query: 270 RPRLTSIIAASSGAM-KADEVAKKAL 294
++ G + + +++A +
Sbjct: 202 EEAMSQRTKTPMGHIGEPNDIAYICV 227
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 111 bits (278), Expect = 2e-29
Identities = 38/261 (14%), Positives = 76/261 (29%), Gaps = 48/261 (18%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+TG GIG GA+V + R+ L + + D
Sbjct: 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVD 58
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+ D+DA + AL GPVD+LV N + + + + VN+ F + +
Sbjct: 59 LGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 118
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+ R G + + +
Sbjct: 119 DMINRGVPG-----------------------------------------SIVNVSSMVA 137
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275
+ + ++K + L +A+ E+ I V+ + P T ++ +
Sbjct: 138 HVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARK 197
Query: 276 IIAASS-GAM-KADEVAKKAL 294
+ + ++V L
Sbjct: 198 LKERHPLRKFAEVEDVVNSIL 218
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (279), Expect = 3e-29
Identities = 51/246 (20%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 38 RHV-FITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
HV +TGG+ GIGLA+ + V + AR + + A Q +Q A G+ + D
Sbjct: 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQ-AEGLSPRFHQLD 61
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ D +++ D G +DVLV N G+ + + + N G+ +
Sbjct: 62 IDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 121
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNT--NMKGINENKLCESSGKGHGGYHVTS 209
LPLIK + + +SS + + + E G V
Sbjct: 122 ELLPLIKPQ-----GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176
Query: 210 WRELSGQFCLLGTLLWIASKFGL----RGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
++ Q + + +K G+ R A L ++ D I ++ P T
Sbjct: 177 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 236
Query: 266 ENKRRP 271
+ + P
Sbjct: 237 KATKSP 242
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (279), Expect = 4e-29
Identities = 55/288 (19%), Positives = 99/288 (34%), Gaps = 57/288 (19%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ + V +TG S GIG +A+ AK GA V + ARS + L++ +
Sbjct: 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 95 DVRDFDAVK----TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
+ D + A G +D+L++N L + VR ++VN +
Sbjct: 72 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 131
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
AALP++K+ SI ++SS AG+ Y
Sbjct: 132 VAALPMLKQSN----GSIVVVSSLAGKVA-------------------YPMVAAYS---- 164
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD--DIHVSLIFPPDTETPGLEEENK 268
ASKF L G ++++E ++ ++L +T +
Sbjct: 165 ----------------ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS 208
Query: 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIA 316
+ A +E A + + G V +S + +
Sbjct: 209 GIVHMQ--------AAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 248
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 110 bits (276), Expect = 4e-29
Identities = 50/273 (18%), Positives = 97/273 (35%), Gaps = 63/273 (23%)
Query: 40 VFITGGSSGIGLALAHQAAKEGAR-------VSILARSGKKLEEAKQSIQLATGIEVATY 92
+ ITG GIG A+A + A+ + + +R+ LE+ + A G T
Sbjct: 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR-AEGALTDTI 62
Query: 93 SADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
+AD+ D V+ G +D LV N GV G L + ++ ++ N+ G+F
Sbjct: 63 TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122
Query: 149 MIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVT 208
+ +A L++++ +G I +++
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATKA-------------------------------- 150
Query: 209 SWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268
+ ++ SKFG RGL E ++ ++ ++ + P TP + +
Sbjct: 151 ----------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD 200
Query: 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGS 301
L M +++A + S
Sbjct: 201 EMQAL---------MMMPEDIAAPVVQAYLQPS 224
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 110 bits (276), Expect = 7e-29
Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 38/263 (14%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
++ + +TGG+ GIGLA A GA V+++ RS E + + G++ Y D
Sbjct: 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCD 67
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + D V + + GP+ L+ N GV V + ++ + DVN+ G F+ +
Sbjct: 68 VSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCR 127
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A L ++Q G SI + SS + Q + N Y+
Sbjct: 128 AVAKLWLQKQQKG--SIVVTSSMSSQIINQSSLNG------------SLTQVFYN----- 168
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
+SK L + L E + I V+ + P T +K+
Sbjct: 169 ---------------SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIR 213
Query: 272 RLTSIIAASSGAMKADEVAKKAL 294
+ + + +E+ +A+
Sbjct: 214 DHQASNIPLNRFAQPEEMTGQAI 236
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 108 bits (269), Expect = 5e-28
Identities = 46/283 (16%), Positives = 88/283 (31%), Gaps = 58/283 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYS 93
V +TG + GIGL L Q K+ + AR +K E K V
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK----DSRVHVLP 57
Query: 94 ADVRDFDAVKTALDEA------GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGS 146
V ++ T + + + +L+ N GV + G + + +DVN T
Sbjct: 58 LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYH 206
+ + LPL+K + +S A + ++ + G +
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT---------DNTSGSAQFP 168
Query: 207 VTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266
V ++R SK + L ++ D++ V P +T
Sbjct: 169 VLAYR---------------MSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN----- 208
Query: 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGI------KSGSFI 303
+ + A+ ++ + + +G F
Sbjct: 209 ----------LGGKNAALTVEQSTAELISSFNKLDNSHNGRFF 241
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 107 bits (269), Expect = 7e-28
Identities = 54/266 (20%), Positives = 95/266 (35%), Gaps = 47/266 (17%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
++ R +TGGS G+G +A A+ G V + +R+ ++ EA Q + G+E +
Sbjct: 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
DV +++ VK L+ G +D +V G+ E LDE R +I+VN+ G++++
Sbjct: 63 DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYV- 121
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
S S
Sbjct: 122 --------------------------CREAFSLLRESDNPSIINIGSLTVEEVTMPNISA 155
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
+ ASK G+ L +AL +E I V++I P T E
Sbjct: 156 --------------YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP 201
Query: 271 PRLTSIIAASS-GAM-KADEVAKKAL 294
+L ++ G +++ A+
Sbjct: 202 EKLDYMLKRIPLGRTGVPEDLKGVAV 227
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (268), Expect = 9e-28
Identities = 49/275 (17%), Positives = 84/275 (30%), Gaps = 62/275 (22%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYS 93
+ + +TG + GIG A A +GA+V+++ + + + K ++ + +
Sbjct: 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 60
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV D ++ + G +D+LV N GV E + +N+
Sbjct: 61 CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEK--------TLQINLVSVISG 112
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
L + K+ G I MSS AG Y
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGL-------------------MPVAQQPVYC--- 150
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAE--ALQQEVIADDIHVSLIFPPDTETPGLE--- 264
ASK G+ G AL ++ + ++ I P T LE
Sbjct: 151 -----------------ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIE 193
Query: 265 -EENKRRPRLTSIIAASSGAMK----ADEVAKKAL 294
EEN + +A +
Sbjct: 194 KEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI 228
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 107 bits (269), Expect = 9e-28
Identities = 55/270 (20%), Positives = 101/270 (37%), Gaps = 54/270 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+D+ ITGG+ GIG A + GA+V I + ++ +I ++ D
Sbjct: 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV--ISFVHCD 62
Query: 96 VRDFDAVKTALD----EAGPVDVLVVNQGV--FVPGELEVQSLDEVRLMIDVNITGSFHM 149
V + V+ +D + G +D++ N GV P + ++ + ++D+N+ G+F +
Sbjct: 63 VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
K A ++ + G A +SS G G HV +
Sbjct: 123 AKHAARVMIPAKKGSIVFTASISSFTA------------------------GEGVSHVYT 158
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE---- 265
K + GL +L E+ I V+ + P +P L +
Sbjct: 159 AT-----------------KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV 201
Query: 266 ENKRRPRLTSIIAASSGAM-KADEVAKKAL 294
++ R L A G + +A++VA
Sbjct: 202 DSSRVEELAHQAANLKGTLLRAEDVADAVA 231
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 107 bits (268), Expect = 3e-27
Identities = 63/271 (23%), Positives = 98/271 (36%), Gaps = 67/271 (24%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI---------LARSGKKLEEAKQSIQLATG 86
R V +TG G+G A A A+ GA V + + + ++ + I+ G
Sbjct: 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG 65
Query: 87 IEVATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGS 146
VA Y + VKTALD G +DV+V N G+ S ++ ++ V++ GS
Sbjct: 66 KAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGS 125
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYH 206
F + +AA +KK+ G I + +S +G G Y
Sbjct: 126 FQVTRAAWDHMKKQNYG---RIIMTASASGIYG-------------------NFGQANYS 163
Query: 207 VTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GL 263
A+K GL GLA L E ++IH + I P +
Sbjct: 164 --------------------AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM 203
Query: 264 EEENKRRPRLTSIIAASSGAMKADEVAKKAL 294
E+ A+K + VA L
Sbjct: 204 PEDLVE-------------ALKPEYVAPLVL 221
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 105 bits (264), Expect = 4e-27
Identities = 57/270 (21%), Positives = 96/270 (35%), Gaps = 53/270 (19%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG +SGIGL +A + KEG RV + AR + L + ++ G+E + DVR
Sbjct: 5 ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSV 63
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
++ + GPVDVLV N G G + + +++ N+TG F + K L
Sbjct: 64 PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 123
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+ G + + S+ Q
Sbjct: 124 AGGMLERGTGRIVNIASTGGKQGVVHAAP------------------------------- 152
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275
+ ASK G+ G +AL E+ I V+ + P ETP + +
Sbjct: 153 ---------YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIW- 202
Query: 276 IIAASSGAMKADEVAKKALDGIKSGSFIVP 305
+ +E + + G ++ P
Sbjct: 203 -------EVSTEEAFDRITARVPIGRYVQP 225
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 105 bits (263), Expect = 5e-27
Identities = 51/270 (18%), Positives = 89/270 (32%), Gaps = 58/270 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TGG+SG+GL + EGA+V+ + ++ + G D
Sbjct: 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHD 60
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + G ++VLV N G+ +PG++E L++ ++ +N F +
Sbjct: 61 VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+ +K + GG SI M+S + Y S
Sbjct: 121 QGIAAMK--ETGG--SIINMASVSSW----------------------LPIEQYAGYSA- 153
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIAD--DIHVSLIFPPDTETP----GLEE 265
SK + L A I V+ I P TP L +
Sbjct: 154 ----------------SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK 197
Query: 266 ENKRRPRLTSIIAASSG-AMKADEVAKKAL 294
+ L +G A + +A+ L
Sbjct: 198 GVSKEMVLHDPKLNRAGRAYMPERIAQLVL 227
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 2e-26
Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 55/271 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQ----LATGIEVAT 91
+ + +TGG++GIG A+ + + G+ V I +R ++L+ A +Q V
Sbjct: 11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70
Query: 92 YSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF 147
++R+ + V + G ++ LV N G E S +++ N+TG+F
Sbjct: 71 IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 130
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHV 207
+M KA G +
Sbjct: 131 YMCKAVYS--------------------------------------SWMKEHGGSIVNII 152
Query: 208 TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267
+ + A++ G+ L ++L E I ++ + P + E
Sbjct: 153 VPTKAGFP-----LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY 207
Query: 268 KRRPRLTSIIAASSGAMK----ADEVAKKAL 294
+ + K +EV+
Sbjct: 208 GSWGQSFFEGSFQKIPAKRIGVPEEVSSVVC 238
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 103 bits (258), Expect = 3e-26
Identities = 41/236 (17%), Positives = 75/236 (31%), Gaps = 47/236 (19%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
P+ + TG GIG +A + + GA V + S K E + G +
Sbjct: 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 62
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
AD+ V D+A G +D ++ N G+ V + + + + ++N G F +
Sbjct: 63 ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
+ L ++ G +
Sbjct: 123 AQQGLKHCRR----------------------------------------GGRIILTSSI 142
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
++G L+ SK + G A + A + V+ I P +T +E
Sbjct: 143 AAVMTGIP---NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDE 195
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 3e-26
Identities = 59/270 (21%), Positives = 93/270 (34%), Gaps = 59/270 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ V +TGG GIG + GARV I + +Q + A I D
Sbjct: 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL-----CD 59
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMI 150
V D VKT + E G +D +V N G P + E S R ++++N+ G++ +
Sbjct: 60 VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 119
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
K ALP ++K Q ++ +SS G Y
Sbjct: 120 KLALPYLRKSQ----GNVINISSLVGAIG-------------------QAQAVPYVA--- 153
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
+K + + +AL + + V+ I P + TP EE
Sbjct: 154 -----------------TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM 196
Query: 271 PRLTSIIAASSGAM------KADEVAKKAL 294
P + I A + EV A+
Sbjct: 197 PDPRASIREGMLAQPLGRMGQPAEVGAAAV 226
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 103 bits (257), Expect = 6e-26
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 13/164 (7%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
K V ITGG+SG+G AL + EGA+V++L +S ++L E + G V D
Sbjct: 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----GDNVLGIVGD 59
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQ-----SLDEVRLMIDVNITGS 146
VR + K A G +D L+ N G++ V + +N+ G
Sbjct: 60 VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190
H +KA LP + + +I+ + I
Sbjct: 120 IHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIV 163
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 101 bits (253), Expect = 2e-25
Identities = 51/276 (18%), Positives = 88/276 (31%), Gaps = 59/276 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--TGIEVATYS 93
+ V ITG S+GIG + A AKEGA+V+I R+ +LEE KQ I A ++
Sbjct: 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVN--QGVFVPGELEVQSLDEVRLMIDVNITGSF 147
ADV + ++ G +D+LV N + Q ++ + +N
Sbjct: 63 ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHV 207
M + + I + + H GY
Sbjct: 123 EMTQ-------------------------KTKEHLIKTKGEIVNVSSIVAGPQAHSGYPY 157
Query: 208 TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLE 264
+ +K L ++I + V+ + P T +
Sbjct: 158 YA-----------------CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG 200
Query: 265 EENKRRPRLTSIIAASSGAM------KADEVAKKAL 294
+L S I + + K +E+A +
Sbjct: 201 LPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV 236
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 99.4 bits (247), Expect = 8e-25
Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 54/274 (19%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT 91
R +K +TGGS GIG A+ + A GARV +R+ K+L+E + + G+ V
Sbjct: 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR-EKGLNVEG 59
Query: 92 YSADVRDFDAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGS 146
D+ + G +++LV N GV + E + + + +++ N +
Sbjct: 60 SVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAA 119
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYH 206
+H+ + A PL+K QNG ++ ++ +
Sbjct: 120 YHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVS------------------------- 154
Query: 207 VTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266
L+ ASK + + ++L E D+I V+ + P TP +E
Sbjct: 155 -----------------LYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA 197
Query: 267 NKRRPRLTSIIAASSGAM------KADEVAKKAL 294
K+ P I K EV+
Sbjct: 198 IKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA 231
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.5 bits (242), Expect = 4e-24
Identities = 56/265 (21%), Positives = 93/265 (35%), Gaps = 53/265 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +T + GIG A A A+EGA+V + KL+E L + T D
Sbjct: 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE------LEKYPGIQTRVLD 58
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
V + +E +DVL G G + + +++N+ + MIKA LP
Sbjct: 59 VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLP 118
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
+ +++G I MSS A S KG V S
Sbjct: 119 KMLAQKSGN---IINMSSVAS---------------------SVKGVVNRCVYS------ 148
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTS 275
+K + GL +++ + I I + + P +TP L+E + R
Sbjct: 149 -----------TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEE 197
Query: 276 IIAASSGAM------KADEVAKKAL 294
A+E+A +
Sbjct: 198 ARNDFLKRQKTGRFATAEEIAMLCV 222
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 96.2 bits (239), Expect = 1e-23
Identities = 51/264 (19%), Positives = 99/264 (37%), Gaps = 49/264 (18%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+++ +TG GIG +A AK + V ++R+ K + I+ + G E + Y+ D
Sbjct: 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK-SFGYESSGYAGD 67
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + + +++ VD+LV N G+ DE ++ N+ F++ +
Sbjct: 68 VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+ + G I +SS G + G Y
Sbjct: 128 PISKRMINNRYG---RIINISSIVGL-------------------TGNVGQANYS----- 160
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN-KRR 270
+SK G+ G ++L +E+ + +I V+ I P + ++ + + +
Sbjct: 161 ---------------SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIK 205
Query: 271 PRLTSIIAASSGAMKADEVAKKAL 294
+ S I A +EVA A
Sbjct: 206 KNIISNIPAGRMG-TPEEVANLAC 228
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 95.3 bits (236), Expect = 3e-23
Identities = 56/275 (20%), Positives = 103/275 (37%), Gaps = 54/275 (19%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSA 94
K + +TG +SGIGL +A A +GA + + ++E+ + + G++V A
Sbjct: 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D+ +AV+ +D A G +D+LV N G+ +E ++ ++ +N++ FH
Sbjct: 63 DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
AALP +KK+ G + +
Sbjct: 123 AAALPHMKKQGFG------------------------------------------RIINI 140
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
G ++A+K G+ G + E I + I P TP +E
Sbjct: 141 ASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE------ 194
Query: 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVP 305
+ S +A +G + + + S F+ P
Sbjct: 195 -KQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 93.5 bits (232), Expect = 7e-23
Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 53/263 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
KD+ V ITG + GIG A AKEGAR+ L EA A + D
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA------AEAVGAHPVVMD 57
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D +V+ EA G +D +V G+ L++ L++ VN+TGSF + K
Sbjct: 58 VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
AA + M+ N + ++ + + G
Sbjct: 118 AA-----------------------------SEAMREKNPGSIVLTASRVYLGNL----- 143
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
G + AS G+ GL L E+ I V+ + P ET + ++
Sbjct: 144 ---------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVR 194
Query: 272 RLTSIIAASSGAMKADEVAKKAL 294
A K EVA AL
Sbjct: 195 EKAIAATPLGRAGKPLEVAYAAL 217
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 93.6 bits (232), Expect = 1e-22
Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 47/234 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG GIG +A + + G +V + + + E + G + A A+
Sbjct: 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKAN 76
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + + +EA G +D++ N GV G ++ + +E + +N G F + +
Sbjct: 77 VGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR 136
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A + + G + H
Sbjct: 137 EAYK---------------------------HLEIGGRLILMGSITGQAKAVPKHAV--- 166
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
+ SK + A + ++ I V+++ P +T
Sbjct: 167 -------------YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA 207
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 93.3 bits (231), Expect = 2e-22
Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 48/236 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI-QLATGIEVATYSA 94
DR V ITGG SG+G A A + A EGA++S++ S + LE +K ++ + A EV T A
Sbjct: 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62
Query: 95 DVRDFDAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHM 149
DV D V+ + G +D N G+ E + E ++ +N+ G F
Sbjct: 63 DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 122
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
++ L +++++ +G + +S G +G G +
Sbjct: 123 LEKVLKIMREQGSGMVVN---TASVGGI----------------------RGIGNQSGYA 157
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
A+K G+ GL E I ++ I P TP +E
Sbjct: 158 -----------------AAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN 196
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 92.1 bits (228), Expect = 4e-22
Identities = 55/266 (20%), Positives = 92/266 (34%), Gaps = 49/266 (18%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + V ITG S+G+G ++A + A E A+V + RS + + G E D
Sbjct: 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGD 65
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V V + A G +DV++ N G+ P SL + +ID N+TG+F +
Sbjct: 66 VTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSR 125
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A+ + G + +
Sbjct: 126 EAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA------------------------- 160
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE---ENK 268
SK G++ + E L E I V+ I P TP E + +
Sbjct: 161 ----------------SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPE 204
Query: 269 RRPRLTSIIAASSGAMKADEVAKKAL 294
+R + S+I + +E+A A
Sbjct: 205 QRADVESMIPMGYIG-EPEEIAAVAA 229
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 91.4 bits (226), Expect = 7e-22
Identities = 51/236 (21%), Positives = 83/236 (35%), Gaps = 46/236 (19%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+TG GIG A+A + K+G V+I + + I G DV D
Sbjct: 4 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN-QAGGHAVAVKVDVSDR 62
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
D V A+++A G DV+V N GV +E + + V + ++N+ G I+AA+
Sbjct: 63 DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 122
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSG 215
KK I N G+ +
Sbjct: 123 AFKKEG---------------HGGKIINACS---------------QAGHVGNPELAVYS 152
Query: 216 QFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
SKF +RGL + +++ I V+ P +TP E +++
Sbjct: 153 S-----------SKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVS 197
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 91.4 bits (226), Expect = 8e-22
Identities = 50/288 (17%), Positives = 85/288 (29%), Gaps = 62/288 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAK---EGARVSILARSGKKLEEAKQSIQ-LATGIEVAT 91
+TG S G G ALA Q A+ G+ + + ARS L + K+ + ++V
Sbjct: 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64
Query: 92 YSADVRDFDAVKT--------ALDEAGPVDVLVVN---QGVFVPGELEVQSLDEVRLMID 140
+AD+ V+ E +L+ N G G L V L EV
Sbjct: 65 AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124
Query: 141 VNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGK 200
+N+T + L + N + +
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSPGL-----------------------SKTVVNISSLCALQ 161
Query: 201 GHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260
+ G+ + A K L + L E + V P +
Sbjct: 162 PYKGWGLYC-----------------AGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDN 202
Query: 261 PGLEE--ENKRRPRLTSIIAASSGA---MKADEVAKKALDGIKSGSFI 303
+ E + P L S + + A+K L ++ +F
Sbjct: 203 DMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQ 250
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 90.9 bits (225), Expect = 9e-22
Identities = 48/243 (19%), Positives = 87/243 (35%), Gaps = 53/243 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ++GG+ G+G + EGA+V ++ + + D
Sbjct: 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL----ADAARYVHLD 60
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V K A+D A G + VLV N G+ G +E +L E + ++DVN+TG F I+
Sbjct: 61 VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 120
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A + +K+ + +
Sbjct: 121 AVVKPMKEAGR------------------------------------------GSIINIS 138
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP---GLEEENK 268
+ G + + A+KF +RGL ++ E+ I V+ I P +TP + E+
Sbjct: 139 SIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF 198
Query: 269 RRP 271
+
Sbjct: 199 QTA 201
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 91.0 bits (225), Expect = 1e-21
Identities = 52/275 (18%), Positives = 102/275 (37%), Gaps = 51/275 (18%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ +TG IGLA A + A+EG +++L + + LE+A+ S++ G+E +Y D
Sbjct: 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVR-EKGVEARSYVCD 62
Query: 96 VRDFDAVK----TALDEAGPVDVLVVN-QGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
V +AV + + + G +D L N ++ D+ ++ +N+TG+FH++
Sbjct: 63 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
KA + + G + A M+ G Y
Sbjct: 123 KAVSRQMITQNYGRIVNTASMAGVKGPPN----------------------MAAYG---- 156
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
SK + L E ++ +I V+ I P + E R+
Sbjct: 157 ----------------TSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE---RQ 197
Query: 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVP 305
L + + + + VA++ + + +
Sbjct: 198 VELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 232
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 90.5 bits (224), Expect = 1e-21
Identities = 41/234 (17%), Positives = 74/234 (31%), Gaps = 48/234 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITG +GIG +A A GA V + + IQ G + D
Sbjct: 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ-QLGGQAFACRCD 68
Query: 96 VRDFDAVK----TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ + A+ + G VD+LV N G P ++ + + R ++N+ FH+ +
Sbjct: 69 ITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDM-PMADFRRAYELNVFSFFHLSQ 127
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
P ++K G +I M+++ + K
Sbjct: 128 LVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA----------------------- 164
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
L + ++ +I V+ I P T L+
Sbjct: 165 -------------------AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS 199
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 90.2 bits (223), Expect = 2e-21
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 9/157 (5%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ ITG + GIG A A +EGARV+I + + I G + D
Sbjct: 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GPAACAIALD 59
Query: 96 VRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D ++ + E G +D+LV N +F + + + + +N++G+ M++
Sbjct: 60 VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119
Query: 152 AALPLIKKRQNGGPASIALM-SSQAGQCWTIKNTNMK 187
A + GG + + G+ K
Sbjct: 120 AVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK 156
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 89.8 bits (222), Expect = 2e-21
Identities = 59/261 (22%), Positives = 100/261 (38%), Gaps = 50/261 (19%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATGIEVATYSADVRD 98
V +TG S GIG A+A K G +V + ARS K EE + I+ A G + T+ DV
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIE-AYGGQAITFGGDVSK 62
Query: 99 FDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
V+ + A G +DV+V N G+ L + +ID+N+TG F +AA
Sbjct: 63 EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
++ K++ G I ++S G G Y
Sbjct: 123 KIMMKKRKG---RIINIASVVGL-------------------IGNIGQANYA-------- 152
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE-ENKRRPRL 273
A+K G+ G ++ +E + +I+V+++ P + + ++
Sbjct: 153 ------------AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKI 200
Query: 274 TSIIAASSGAMKADEVAKKAL 294
I + + VA
Sbjct: 201 LGTIPLGRTG-QPENVAGLVE 220
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 90.2 bits (223), Expect = 3e-21
Identities = 44/267 (16%), Positives = 86/267 (32%), Gaps = 50/267 (18%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + FITGG +G+G + + GA+ I +R L+ + I TG +V D
Sbjct: 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCD 83
Query: 96 VRDFDAVKTA----LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
VRD D V+ + AG ++++ N E S + + + D+ + G+ +
Sbjct: 84 VRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTL 143
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+ + + G G
Sbjct: 144 E------------------------IGKQLIKAQKGAAFLSITTIYAETGSGFVVP---- 175
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG----LEEEN 267
++K G+ ++++L E + ++I P +T G L+
Sbjct: 176 -------------SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG 222
Query: 268 KRRPRLTSIIAASSGAMKADEVAKKAL 294
+ I +E+A A
Sbjct: 223 TFEKEMIGRIPCGRLG-TVEELANLAA 248
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.9 bits (222), Expect = 4e-21
Identities = 71/286 (24%), Positives = 110/286 (38%), Gaps = 66/286 (23%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-----TGIEVATYSA 94
V ITG SSGIGL LA + A + ++ + + + L+ + + A + T
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 95 DVRDFDAVKTA--LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152
DVRD +V A G VDVLV N G+ + G LE D V ++DVN+ G+ M++A
Sbjct: 65 DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124
Query: 153 ALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRE 212
LP +K+R +G + G + Y
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLMGLP----------------------FNDVYC------ 156
Query: 213 LSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE------- 265
ASKF L GL E+L ++ +H+SLI T +E+
Sbjct: 157 --------------ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEE 202
Query: 266 -----ENKRRPRLTSIIAAS-----SGAMKADEVAKKALDGIKSGS 301
+ R +A S A +EVA+ L +++
Sbjct: 203 VLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK 248
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 88.6 bits (219), Expect = 5e-21
Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 57/262 (21%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
I+D+ V + S GIG A+A ++EGA V+I AR+ + L+ +
Sbjct: 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY----------VVC 51
Query: 95 DVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
D+R + ++ VD+LV+N G G + + ++ + ID +++ L
Sbjct: 52 DLR--KDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 109
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
P +K++ G +I S + +
Sbjct: 110 PAMKEKGWGRIVAITSFSVISPIENLYTSN------------------------------ 139
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE--ENKRRPR 272
+++ L G + L EV I V+ + P TET ++E +++ +
Sbjct: 140 ------------SARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQ 187
Query: 273 LTSIIAASSGAMKADEVAKKAL 294
+ S I A K +E+A
Sbjct: 188 VESQIPMRRMA-KPEEIASVVA 208
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 87.9 bits (217), Expect = 1e-20
Identities = 52/230 (22%), Positives = 87/230 (37%), Gaps = 50/230 (21%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG S GIG A+A A GA+V A S + + G +
Sbjct: 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL----GANGKGLMLN 58
Query: 96 VRDFDAVKT----ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D ++++ E G VD+LV N G+ L +E +I+ N++ F + K
Sbjct: 59 VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 118
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
A + + K+++G I + S G G Y
Sbjct: 119 AVMRAMMKKRHG---RIITIGSVVGT-------------------MGNGGQANYA----- 151
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261
A+K GL G +++L +EV + I V+++ P ET
Sbjct: 152 ---------------AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD 186
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 87.8 bits (217), Expect = 1e-20
Identities = 24/153 (15%), Positives = 51/153 (33%), Gaps = 12/153 (7%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+T G+ A + ++ G V+ S K+ +E +
Sbjct: 3 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-------AFAETYPQLKPMSE 55
Query: 100 DAVKTALDEA----GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
++ G VDVLV N ++ ++++ R ++ F ++ A
Sbjct: 56 QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 115
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187
+KKR++G I + T+ +
Sbjct: 116 SQMKKRKSGHIIFITSATPFGPWKELSTYTSAR 148
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 84.8 bits (209), Expect = 1e-19
Identities = 56/263 (21%), Positives = 90/263 (34%), Gaps = 53/263 (20%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + +TG +SGIG A A+EGA + + R + L EA ++ E AD
Sbjct: 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVAD 59
Query: 96 VRDFDAVKT----ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V D AV+ AL+E G + + GV L+ ++ VN+TGSF +
Sbjct: 60 VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLV-- 117
Query: 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWR 211
+G + +G G G +
Sbjct: 118 --------------------------ARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAG 151
Query: 212 ELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271
K G+ GLA L E+ + V+++ P +TP
Sbjct: 152 -----------------KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAW 194
Query: 272 RLTSIIAASSGAMKADEVAKKAL 294
+ A + +EVA+ AL
Sbjct: 195 EQEVGASPLGRAGRPEEVAQAAL 217
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 84.8 bits (208), Expect = 2e-19
Identities = 42/282 (14%), Positives = 83/282 (29%), Gaps = 61/282 (21%)
Query: 38 RHVFITGGSSGIGLALAHQ---AAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ ITG + G+GL L + + R+ ++ +E + +
Sbjct: 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED--LAKNHSNIHILEI 60
Query: 95 DVRDFDAVK------TALDEAGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSF 147
D+R+FDA + + ++VL N G+ + E+ + N
Sbjct: 61 DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 120
Query: 148 HMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHV 207
+ KA LPL+KK + M ++
Sbjct: 121 MLAKACLPLLKKAAKANESQP--MGVGRAAII--------------------------NM 152
Query: 208 TSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267
+S G + SK L ++L ++ I + P +T
Sbjct: 153 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD------ 206
Query: 268 KRRPRLTSIIAASSGAMKADEVAKKALDGI------KSGSFI 303
+ SS + + + I ++G F+
Sbjct: 207 ---------MGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFV 239
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 81.3 bits (200), Expect = 2e-18
Identities = 55/265 (20%), Positives = 98/265 (36%), Gaps = 58/265 (21%)
Query: 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS 93
P R V +TGG+ GIGLA+A + A +G +V++ R + +
Sbjct: 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------GLFGVE 51
Query: 94 ADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
DV D DAV A GPV+VLV N G+ L + ++ +I+ N+TG+F +
Sbjct: 52 VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV 111
Query: 150 IKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTS 209
+ A +++ + G I +S G
Sbjct: 112 AQRASRSMQRNKFGRMIFIGSVSGLWGIGNQA---------------------------- 143
Query: 210 WRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269
+ ASK G+ G+A ++ +E+ ++ +++ P +T ++R
Sbjct: 144 --------------NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER 189
Query: 270 RPRLTSIIAASSGAMKADEVAKKAL 294
+ + EVA
Sbjct: 190 IQQGALQFIPAKRVGTPAEVAGVVS 214
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 80.7 bits (198), Expect = 5e-18
Identities = 37/264 (14%), Positives = 69/264 (26%), Gaps = 36/264 (13%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKL-EEAKQSIQLATGIEVATYSADVRD 98
ITGG+ IG ++A + ++G RV + R + + + A D+
Sbjct: 4 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63
Query: 99 F--------DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMI 150
D + + G DVLV N + P L +
Sbjct: 64 SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELF 123
Query: 151 KAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+ L +A + + N + +
Sbjct: 124 GSNA------------VAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCV 171
Query: 211 RELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270
+K L GL A E+ I V+ + P + P + + +
Sbjct: 172 Y--------------TMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ-ETQ 216
Query: 271 PRLTSIIAASSGAMKADEVAKKAL 294
+ A ++A
Sbjct: 217 EEYRRKVPLGQSEASAAQIADAIA 240
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 77.6 bits (190), Expect = 3e-17
Identities = 28/229 (12%), Positives = 55/229 (24%), Gaps = 52/229 (22%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ R V + GG +G V+ + + A +++
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFT-----EQ 55
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGE-LEVQSLDEVRLMIDVNITGSFHMIKAAL 154
A L VD ++ G + G LM +I S A
Sbjct: 56 ADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA- 114
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
+ + L ++A T
Sbjct: 115 ----TKHLKEGGLLTLAGAKAALDGTP--------------------------------- 137
Query: 215 GQFCLLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIFPPDTETP 261
G + + +K + L ++L + + + P +TP
Sbjct: 138 ------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 180
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 77.5 bits (190), Expect = 4e-17
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 23/151 (15%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96
+R +TGG+SG+G A A G RV +L G ++ DV
Sbjct: 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLR-------------REGEDLIYVEGDV 47
Query: 97 RDFDAVKTALDEA-------GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
+ V+ A+ A V V + G+ L+ R +++VN+ G+F++
Sbjct: 48 TREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 107
Query: 150 IKAALPLIKKRQ---NGGPASIALMSSQAGQ 177
++ A +++ G I +S A
Sbjct: 108 LRLAAWAMRENPPDAEGQRGVIVNTASVAAF 138
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 75.7 bits (185), Expect = 2e-16
Identities = 33/265 (12%), Positives = 63/265 (23%), Gaps = 60/265 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V + GG +G A+ K G V + S ++ + +
Sbjct: 5 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGN----KNWTEQEQSIL 60
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQ-SLDEVRLMIDVNITGSFHMIKAALPLIK 158
+ ++L + VD + G + G + + LMI ++ S K
Sbjct: 61 EQTASSL-QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK------- 112
Query: 159 KRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFC 218
T + G
Sbjct: 113 ------------------LATTHLKPGGLLQL-----TGAAAAMGPTPSMIGY------- 142
Query: 219 LLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIFPPDTETPGLEEENKRRPRLTSI 276
+K + L +L + + D+ V I P +TP +
Sbjct: 143 -------GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADH---- 191
Query: 277 IAASSGAMKADEVAKKALDGIKSGS 301
S +++ L S
Sbjct: 192 ----SSWTPLSFISEHLLKWTTETS 212
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.2 bits (176), Expect = 4e-15
Identities = 57/279 (20%), Positives = 96/279 (34%), Gaps = 50/279 (17%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+K ITGG+SG+GLA A + +GA +L E + + A ++
Sbjct: 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62
Query: 95 DVRDFDAVKTALDEAGPVDVLVVNQGVFVPG------ELEVQSLDEVRLMIDVNITGSFH 148
+ A+ A + G VDV V G+ V + + +L++ + ++DVN+ G+F+
Sbjct: 63 EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 122
Query: 149 MIKAALPLIKKRQNG---GPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGY 205
+I+ + + + I +S A G Y
Sbjct: 123 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAF-------------------EGQVGQAAY 163
Query: 206 HVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265
ASK G+ G+ + +++ I V I P TP L
Sbjct: 164 S--------------------ASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS 203
Query: 266 -ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFI 303
K L S + S E A I F+
Sbjct: 204 LPEKVCNFLASQVPFPSRLGDPAEYAHLVQA-IIENPFL 241
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 70.1 bits (170), Expect = 3e-14
Identities = 31/190 (16%), Positives = 49/190 (25%), Gaps = 42/190 (22%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQLATG------------ 86
+TG + +G ++A EG V + RS + ++
Sbjct: 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64
Query: 87 -----IEVATYSADVRDFDAVKTALDEA----GPVDVLVVNQGVFVPGELEVQSLDEVRL 137
+ A SA V F + G DVLV N F P L D
Sbjct: 65 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 124
Query: 138 --------------MIDVNITGSFHMI------KAALPLIKKRQNGGPASIALMSSQAGQ 177
+ N + +I A P + N ++ +
Sbjct: 125 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 184
Query: 178 CWTIKNTNMK 187
T K
Sbjct: 185 LGYTIYTMAK 194
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 68.0 bits (165), Expect = 1e-13
Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 30/191 (15%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ I+G ++GIG A G ++ + ++ AD+
Sbjct: 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI------------------ADLSTA 45
Query: 100 DAVKTALDEA-----GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAAL 154
+ K A+ + +D LV+ G+ ++ + ++ VN G+ ++ A L
Sbjct: 46 EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKV-------LGNVVSVNYFGATELMDAFL 98
Query: 155 PLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELS 214
P +KK I+ ++S E + + G S
Sbjct: 99 PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158
Query: 215 GQFCLLGTLLW 225
+
Sbjct: 159 KNALTVAVRKR 169
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 67.2 bits (163), Expect = 2e-13
Identities = 22/153 (14%), Positives = 57/153 (37%), Gaps = 13/153 (8%)
Query: 33 IPIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVA 90
+ + + + G ++ +G A+A + + GA V++ ++ + EA++ + G +
Sbjct: 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLF 63
Query: 91 TYSADVRDF--DAVKTALDEAGPVDVLV----VNQGVFVPGELEVQSLDEVRLMIDVNIT 144
+ + G +D LV + G + L ++V+
Sbjct: 64 RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123
Query: 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
+ + A PL+++ I ++ A +
Sbjct: 124 SLVAVARRAEPLLREG-----GGIVTLTYYASE 151
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 57.6 bits (138), Expect = 4e-10
Identities = 19/151 (12%), Positives = 49/151 (32%), Gaps = 14/151 (9%)
Query: 36 KDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL--ATGIEVAT 91
+ + +TG +S I +A +EGA ++ ++ K ++ + +
Sbjct: 4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCD 63
Query: 92 YSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELE-----VQSLDEVRLMIDVNITGS 146
+ D D V + G +L+ + + ++ D++
Sbjct: 64 VAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSF 123
Query: 147 FHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177
M KA ++ ++ +S +
Sbjct: 124 VAMAKACRSMLNPGS-----ALLTLSYLGAE 149
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 56.6 bits (135), Expect = 1e-09
Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 5/180 (2%)
Query: 36 KDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEV--AT 91
K + I G ++ I +A +GA ++ + + + Q V
Sbjct: 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELD 63
Query: 92 YSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
S + + + G +D +V + LE L+ + + + S + +
Sbjct: 64 VSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLI 123
Query: 152 AALPLIKKRQNGGPASI-ALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSW 210
+K N G + + + G +H+
Sbjct: 124 ELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVN 183
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 54.2 bits (129), Expect = 5e-09
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 37 DRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGKKLEEAKQSIQ 82
V +TGG+ G+G +A A+ GA +L +RSG + A + +
Sbjct: 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVA 55
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 53.0 bits (126), Expect = 6e-09
Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 9/136 (6%)
Query: 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIE 88
K +K + + G+ +G+ A A EGA V + R K + + + +
Sbjct: 15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA--AADSVNKRFK 72
Query: 89 VATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFH 148
V +A+ D + A+ + + + E+ + + I ++
Sbjct: 73 VNVTAAETADDASRAEAV---KGAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYN 125
Query: 149 MIKAALPLIKKRQNGG 164
+ G
Sbjct: 126 AQPPLGIGGIDATDKG 141
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 50.8 bits (120), Expect = 5e-08
Identities = 16/115 (13%), Positives = 33/115 (28%), Gaps = 3/115 (2%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG---IEVATYSADV 96
V + GG+ +G LA + A G + + +R +K E + G I
Sbjct: 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAA 62
Query: 97 RDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
D + +D + + + + R + +
Sbjct: 63 EACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAE 117
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 50.9 bits (120), Expect = 6e-08
Identities = 8/44 (18%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 36 KDRHVFITG--GSSGIGLALAHQAAKEGARVSILARSGKKLEEA 77
+ + ++G S I +A A ++GA++ + +L +
Sbjct: 5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQR 48
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 50.2 bits (119), Expect = 1e-07
Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILAR-----SGKKLEEAKQSIQLATGIEVATYSA 94
ITG + G LA ++G V + R + ++++ Q + +
Sbjct: 4 ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT-CNPKFHLHYG 62
Query: 95 DVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D+ D + L E P +V + V S + DV+ G+ +++A
Sbjct: 63 DLSDTSNLTRILREVQPDEVYNLGAMSHVA-----VSFESPEYTADVDAMGTLRLLEAI 116
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 48.2 bits (113), Expect = 6e-07
Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Query: 33 IPIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVA 90
I ++ + FI G + G G A+A A GA + + +
Sbjct: 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63
Query: 91 TYSADVRDFDAV 102
+ + V
Sbjct: 64 LPDGSLMEIKKV 75
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 47.4 bits (111), Expect = 1e-06
Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 12/124 (9%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSI---LARSGKKLEEAKQSIQLATGIEVATYSADV 96
+ ITGG +G LA A +G + + L+R G + + E D+
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT--DNLHWLSSLGNFEF--VHGDI 58
Query: 97 RDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156
R+ + V + + P + V + S+D + ++N+ G+ ++++A
Sbjct: 59 RNKNDVTRLITKYMPDSCFHLAGQVAMT-----TSIDNPCMDFEINVGGTLNLLEAVRQY 113
Query: 157 IKKR 160
Sbjct: 114 NSNC 117
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 45.2 bits (105), Expect = 6e-06
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSA 94
+ + VF+TG + G L+ GA V + + + ++ ++A G++
Sbjct: 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQS--EIG 63
Query: 95 DVRDFDAV 102
D+RD + +
Sbjct: 64 DIRDQNKL 71
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 45.0 bits (105), Expect = 7e-06
Identities = 21/157 (13%), Positives = 46/157 (29%), Gaps = 7/157 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ +++ +TGG+ IG H V + K +++ G V D
Sbjct: 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGD 60
Query: 96 VRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALP 155
+ D + V +A + SL++ I N G++ +++AA
Sbjct: 61 IADAELVDKLAAKADAIVHYAAESHND-------NSLNDPSPFIHTNFIGTYTLLEAARK 113
Query: 156 LIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192
+ + + +
Sbjct: 114 YDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE 150
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 44.7 bits (105), Expect = 8e-06
Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ ITGG+ IG A+ K + + ++ AD+ D
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS 62
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
+ ++ P V+ + V +S+ I+ NI G++ +++ A
Sbjct: 63 AEITRIFEQYQPDAVMHLAAESHVD-----RSITGPAAFIETNIVGTYALLEVA 111
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 43.8 bits (102), Expect = 2e-05
Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TGGS IG Q + G V IL I+ G D+R+
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
+ L + D ++ G+ GE S+ + D N+ G+ +I
Sbjct: 63 ALMTEILHDHAI-DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLIS 109
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 43.6 bits (101), Expect = 2e-05
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVAT- 91
+P + V +TG + + + Q + G +V ARS KL ++ T
Sbjct: 8 LP-EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETA 66
Query: 92 YSADVRDFDAVK 103
D+ A
Sbjct: 67 VVEDMLKQGAYD 78
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (102), Expect = 2e-05
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 10/119 (8%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILAR-----SGKKLEEAKQSIQLATGIEVATYSA 94
ITG + G LA ++G V + R + ++E ++ Q + +
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63
Query: 95 DVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAA 153
D+ D + ++E P ++ + V S D DV+ G+ ++ A
Sbjct: 64 DLTDSTCLVKIINEVKPTEIYNLGAQSHVK-----ISFDLAEYTADVDGVGTLRLLDAV 117
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 42.2 bits (97), Expect = 6e-05
Identities = 8/56 (14%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Query: 37 DRHVFITG--GSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVA 90
+ FI G ++G G +A + +K ++ K ++
Sbjct: 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMI 57
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (95), Expect = 1e-04
Identities = 17/121 (14%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRD 98
+ ITGG+ +G L + +G V+++ + + I + ++ +
Sbjct: 4 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGH--------ENFELIN 55
Query: 99 FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIK 158
D V+ E + L + + N G+ +M+ A +
Sbjct: 56 HDVVEPLYIEVDQIYHLASPASP-------PNYMYNPIKTLKTNTIGTLNMLGLAKRVGA 108
Query: 159 K 159
+
Sbjct: 109 R 109
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.8 bits (94), Expect = 2e-04
Identities = 13/75 (17%), Positives = 27/75 (36%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
V +TGG+ IG + + G + ++ +++ T + Y D+ D
Sbjct: 4 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63
Query: 100 DAVKTALDEAGPVDV 114
++ E V
Sbjct: 64 KGLEKVFKEYKIDSV 78
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 40.8 bits (94), Expect = 2e-04
Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSAD 95
+ + + + G + G +L AA G V S K L + +Q + +
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL--IAEELQAIPNVTLFQ--GP 57
Query: 96 VRDFDAVKTALDEAGPVDVLV 116
+ + + L E + +
Sbjct: 58 LLNNVPLMDTLFEGAHLAFIN 78
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (90), Expect = 3e-04
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKL 74
+ I G + GL QA + G V++L R +L
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL 40
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.0 bits (89), Expect = 5e-04
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILA--RSGKKLEEAKQSIQLATG 86
V +TG S G + + + + RS + E+ + G
Sbjct: 6 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIG 54
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 38.5 bits (88), Expect = 8e-04
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILAR-----SGKKLEEAKQSIQLATGIEVATYSA 94
ITG + G L +G V L R + +++ + + A
Sbjct: 4 ALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYA 63
Query: 95 DVRDFDAVKTALD 107
D+ D +++ +D
Sbjct: 64 DLTDASSLRRWID 76
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.1 bits (87), Expect = 0.001
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSIL------ARSGKKLEEAKQSIQLATGIEVATYS 93
V +TGG+ IG + + G ++ R G L E+ + +Q TG V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 94 ADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHM 149
D+ D A++ + + V+ V +S+ + VN+TG+ +
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVG-----ESVQKPLDYYRVNLTGTIQL 115
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.7 bits (83), Expect = 0.002
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEE 76
+ V + G + G L + E ++A + K L E
Sbjct: 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE 41
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.9 bits (84), Expect = 0.003
Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 11/126 (8%)
Query: 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR----SGKKLEEAKQSIQLATGI 87
+P + + ITG + IG L K +V L + L+E + +
Sbjct: 11 ELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS 70
Query: 88 EVATYSADVRDFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSF 147
D+R+ D A V V +S+++ NI G
Sbjct: 71 NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVP-------RSINDPITSNATNIDGFL 123
Query: 148 HMIKAA 153
+M+ AA
Sbjct: 124 NMLIAA 129
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 36.5 bits (82), Expect = 0.003
Identities = 14/112 (12%), Positives = 31/112 (27%), Gaps = 20/112 (17%)
Query: 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDF 99
+ + G + +G L A G +++ S + + D +
Sbjct: 3 ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE-------------------FCGDFSNP 43
Query: 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIK 151
V + + P DV+V + E + L + +
Sbjct: 44 KGVAETVRKLRP-DVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANE 94
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 36.7 bits (83), Expect = 0.003
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Query: 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAK-QSIQLATGIEVATYSA 94
K V I GG+ IG + + + G +L R K Q + + A
Sbjct: 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 61
Query: 95 DVRDF 99
+ D
Sbjct: 62 SLDDH 66
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 366 | |||
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.96 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.77 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.76 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.71 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.71 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.68 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.68 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.67 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.66 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.65 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.63 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.61 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.59 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.59 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.58 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.57 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.57 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.55 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.55 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.54 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.53 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.52 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.48 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.46 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.46 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.22 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.16 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.14 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 98.95 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.9 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 98.89 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 98.87 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.75 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.02 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.98 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.94 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.87 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.75 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.68 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.62 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.6 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.5 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.5 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.47 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.41 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.4 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.39 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.38 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.38 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.28 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.19 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.16 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.1 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.1 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.03 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.02 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.02 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.01 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.97 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.96 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.96 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.94 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.94 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.89 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.86 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.86 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.82 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.8 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.77 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 96.71 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.71 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.69 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.61 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.55 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.54 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.51 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.48 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.47 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.47 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.45 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.44 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.4 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.37 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.34 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.28 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.27 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.27 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.26 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.21 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.09 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.09 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.06 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.0 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.96 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 95.95 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.91 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.9 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 95.89 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.82 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.57 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.47 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 95.41 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.33 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.12 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.0 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 94.99 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 94.95 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 94.91 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 94.5 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 94.49 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 94.47 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.18 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 94.11 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 94.03 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 94.01 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 93.96 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 93.94 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 93.89 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 93.76 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.74 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 93.62 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 93.53 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 93.42 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 93.41 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.36 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.24 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 93.21 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 93.09 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 93.07 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 93.03 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 92.95 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 92.87 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 92.78 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 92.74 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 92.69 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 92.64 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 92.62 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 92.52 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 92.35 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 92.29 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 92.25 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 92.25 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 92.23 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 92.14 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 92.13 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 91.91 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 91.87 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 91.79 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 91.78 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 91.36 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 91.3 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 91.28 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 91.19 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 91.17 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 91.11 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 91.1 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 91.1 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 90.85 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 90.65 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 90.59 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 90.57 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 90.48 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 90.43 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 90.42 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 90.35 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.24 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 90.22 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 90.18 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 90.0 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 89.96 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 89.83 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 89.57 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 89.42 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 89.28 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 88.97 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 88.94 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 88.79 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 88.73 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 88.7 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 88.62 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 88.43 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 88.02 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 87.82 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 87.69 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 87.35 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 87.14 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 86.33 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 86.2 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 86.07 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 85.88 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 85.86 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 85.49 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 85.14 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 85.12 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 85.1 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 85.05 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 84.92 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 84.89 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 84.8 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 84.71 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 84.58 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 84.03 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 84.03 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 83.93 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 83.82 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 83.76 | |
| d1kl7a_ | 511 | Threonine synthase {Baker's yeast (Saccharomyces c | 83.76 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 83.74 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 82.4 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 82.36 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 82.36 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 82.25 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 81.65 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 80.7 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 80.61 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 80.57 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 80.56 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 80.19 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 80.04 |
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=7.6e-55 Score=397.79 Aligned_cols=246 Identities=26% Similarity=0.346 Sum_probs=225.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+.++.++++|++|++++++++++
T Consensus 1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999887788999999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||+++|..+...
T Consensus 81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~G~Ii~i~S~~~~~~--------- 148 (251)
T d1vl8a_ 81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD---NPSIINIGSLTVEEV--------- 148 (251)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS---SCEEEEECCGGGTCC---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc---cccccccccchhccc---------
Confidence 68999999999998889999999999999999999999999999999999877 689999999765330
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++.+....
T Consensus 149 ------------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~ 199 (251)
T d1vl8a_ 149 ------------TMPNIS-----------------AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS 199 (251)
T ss_dssp ------------CSSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT
T ss_pred ------------cCcccc-----------------chHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccC
Confidence 455666 899999999999999999999999999999999999999876432
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.++..+.+.+.+|.||+++|+|++..++||+ |++++|+|||+|.||||||+
T Consensus 200 -----------------~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~----S~~a~~itG~~i~vDGG~ta 250 (251)
T d1vl8a_ 200 -----------------DPEKLDYMLKRIPLGRTGVPEDLKGVAVFLA----SEEAKYVTGQIIFVDGGWTA 250 (251)
T ss_dssp -----------------CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred -----------------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CchhCCCcCcEEEeCcCeeC
Confidence 2445677888999999999999999999999 99999999999999999974
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=1.7e-54 Score=396.95 Aligned_cols=250 Identities=25% Similarity=0.290 Sum_probs=228.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh----
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.... +.++.++++|++|++++++++++
T Consensus 1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999988887654 45899999999999999888765
Q ss_pred cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||+..+ .++++.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~---~G~Ii~isS~~~~~--------- 148 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG---SGMVVNTASVGGIR--------- 148 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCGGGTS---------
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc---CCCCcccccHhhcc---------
Confidence 6999999999998754 6788999999999999999999999999999999887 78999999999987
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+.+|+++||.|++++|||||+|+||+|+|++.+...
T Consensus 149 -------------~~~~~~-----------------~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~ 198 (258)
T d1iy8a_ 149 -------------GIGNQS-----------------GYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM 198 (258)
T ss_dssp -------------BCSSBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH
T ss_pred -------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHH
Confidence 777777 99999999999999999999999999999999999999987654
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.... ...+++..+.+.+.+|.||+++|+|+++.++||+ |++++|+|||+|.||||+++
T Consensus 199 ~~~~-----------~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~----S~~s~~itG~~i~VDGG~sa 256 (258)
T d1iy8a_ 199 KQLD-----------PENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL----SDDASYVNATVVPIDGGQSA 256 (258)
T ss_dssp HHHC-----------TTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTTTT
T ss_pred hhcC-----------cccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCcCceEEcCcchhc
Confidence 3211 2357888899999999999999999999999999 99999999999999999985
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=2.3e-54 Score=396.46 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=228.8
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.+++|+||++|||||++|||+++|++|+++|++|++++|++++++++.++++.. +.++.++++|++|++++++++++
T Consensus 2 g~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d2ae2a_ 2 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDLSSRSERQELMNTVA 80 (259)
T ss_dssp CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999999998765 67889999999999999988765
Q ss_pred --cC-CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 --AG-PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 --~~-~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++ ++|++|||||+....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~G~Ii~isS~~~~~------- 150 (259)
T d2ae2a_ 81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE---RGNVVFISSVSGAL------- 150 (259)
T ss_dssp HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS---SEEEEEECCGGGTS-------
T ss_pred HHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc---cccccccccccccc-------
Confidence 45 799999999999899999999999999999999999999999999999987 68999999999987
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+|++.+.
T Consensus 151 ---------------~~~~~~-----------------~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~ 198 (259)
T d2ae2a_ 151 ---------------AVPYEA-----------------VYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM 198 (259)
T ss_dssp ---------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH
T ss_pred ---------------cccccc-----------------chHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHh
Confidence 777888 999999999999999999999999999999999999998765
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
.... ...++..+.+.+.+|.||+++|+|+++.++||+ |++++|+|||+|.||||+++.
T Consensus 199 ~~~~--------------~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~----S~~s~~itG~~i~VDGG~~a~ 256 (259)
T d2ae2a_ 199 TIQD--------------PEQKENLNKLIDRCALRRMGEPKELAAMVAFLC----FPAASYVTGQIIYVDGGLMAN 256 (259)
T ss_dssp HTTS--------------HHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGGC
T ss_pred hhhc--------------hhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhCCCcCcEEEECCCeEee
Confidence 4321 123556677888999999999999999999999 999999999999999998753
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.8e-54 Score=395.38 Aligned_cols=243 Identities=21% Similarity=0.291 Sum_probs=223.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..++++||++|||||++|||+++|++|+++|++|++++|++++++++.++++.. +.++.++++|++|++++++++++
T Consensus 4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~-g~~~~~~~~Dvt~~~~v~~~~~~~~ 82 (251)
T d2c07a1 4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDVSKKEEISEVINKIL 82 (251)
T ss_dssp CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999765 66899999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||.....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~G~IVnisS~~~~~-------- 151 (251)
T d2c07a1 83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR---YGRIINISSIVGLT-------- 151 (251)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT---CEEEEEECCTHHHH--------
T ss_pred HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC---CeEEEEECCHHhcC--------
Confidence 69999999999999999999999999999999999999999999999999987 79999999999987
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. +|++||+|+.+|+|++|.|++++|||||+|+||+|+|++.+..
T Consensus 152 --------------~~~~~~-----------------~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~ 200 (251)
T d2c07a1 152 --------------GNVGQA-----------------NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI 200 (251)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C
T ss_pred --------------CCCCCH-----------------HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc
Confidence 777888 9999999999999999999999999999999999999987642
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+++..+.+.+.+|.||+++|+|+++.+.||+ |++++|+|||+|.||||+|
T Consensus 201 -------------------~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~----S~~s~~itG~~i~vDGG~s 250 (251)
T d2c07a1 201 -------------------SEQIKKNIISNIPAGRMGTPEEVANLACFLS----SDKSGYINGRVFVIDGGLS 250 (251)
T ss_dssp -------------------CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSC
T ss_pred -------------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhCCCcCcEEEECCCcC
Confidence 3667788899999999999999999999999 9999999999999999975
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1.9e-54 Score=397.35 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=216.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
|+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++....+.++.++++|++|++++++++++ +
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999997 46778888888877788999999999999999988765 6
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||+..+.++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~---~G~Iv~isS~~~~~----------- 147 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG---FGRIINIASAHGLV----------- 147 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS-----------
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC---CceEeeccccccee-----------
Confidence 9999999999999999999999999999999999999999999999999987 68999999999988
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++.+.....
T Consensus 148 -----------~~~~~~-----------------~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~ 199 (260)
T d1x1ta1 148 -----------ASANKS-----------------AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISA 199 (260)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------
T ss_pred -----------ccCCcc-----------------hhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhh
Confidence 778888 9999999999999999999999999999999999999998765432
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..... .....+...+.+.+.+|.||+++|+|+++.++||+ |++++|+|||+|.+|||+|+
T Consensus 200 ~~~~~-------~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~----S~~a~~itG~~i~vDGG~ta 259 (260)
T d1x1ta1 200 LAEKN-------GVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA----SDAAAQITGTTVSVDGGWTA 259 (260)
T ss_dssp ----------------------CHHHHCTTCCCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred hhhhc-------CCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----ChhhCCCcCCEEEECcchhc
Confidence 21110 01122334455778899999999999999999999 99999999999999999873
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.3e-54 Score=390.72 Aligned_cols=241 Identities=20% Similarity=0.233 Sum_probs=222.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+.++.+|++|++++++++++++++
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~g~i 75 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGDWDATEKALGGIGPV 75 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999988888777653 4678899999999999999999999
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||+..+.++.+.+.++|++++++|+.++++++|++.|.|.+++. .|+||++||.++..
T Consensus 76 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~--~g~ii~isS~~~~~-------------- 139 (242)
T d1cyda_ 76 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV--PGSIVNVSSMVAHV-------------- 139 (242)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCGGGTS--------------
T ss_pred eEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcc--cCcccccchhhccc--------------
Confidence 99999999998999999999999999999999999999999998766543 68999999999887
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+...
T Consensus 140 --------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~----- 189 (242)
T d1cyda_ 140 --------TFPNLI-----------------TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS----- 189 (242)
T ss_dssp --------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-----
T ss_pred --------cCCccc-----------------cccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc-----
Confidence 777888 99999999999999999999999999999999999999877643
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
..++..+.+.+.+|.||+++|+|++..+.||+ |++++|+|||+|.+||||++
T Consensus 190 ------------~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~----S~~s~~itG~~i~vDGG~~a 241 (242)
T d1cyda_ 190 ------------ADPEFARKLKERHPLRKFAEVEDVVNSILFLL----SDRSASTSGGGILVDAGYLA 241 (242)
T ss_dssp ------------CCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSSEEEESTTGGG
T ss_pred ------------CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCcCCceEEeCcchhc
Confidence 23567778888999999999999999999999 99999999999999999875
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-54 Score=392.13 Aligned_cols=243 Identities=22% Similarity=0.265 Sum_probs=222.6
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
|+++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+.++.+|++|++++++++++++
T Consensus 1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~g 75 (244)
T d1pr9a_ 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999999999999888877654 46788999999999999999999
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
++|++|||||.....++.+.+.++|++++++|+.++++++|+++|.|.+++. .|+||++||.++..
T Consensus 76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~--~g~Ii~isS~~~~~------------ 141 (244)
T d1pr9a_ 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV--PGAIVNVSSQCSQR------------ 141 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCGGGTS------------
T ss_pred CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC--cceEeecccccccc------------
Confidence 9999999999999999999999999999999999999999999997765432 68999999999987
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcC
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRR 270 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~ 270 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++.+...
T Consensus 142 ----------~~~~~~-----------------~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~--- 191 (244)
T d1pr9a_ 142 ----------AVTNHS-----------------VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW--- 191 (244)
T ss_dssp ----------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS---
T ss_pred ----------cccchh-----------------hhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc---
Confidence 777888 99999999999999999999999999999999999999876532
Q ss_pred CcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 271 PRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
...+..+.+.+.+|.||+++|+|+++.+.||+ |++++|+|||+|++||||++
T Consensus 192 --------------~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~----S~~a~~itG~~i~vDGG~~A 243 (244)
T d1pr9a_ 192 --------------SDPHKAKTMLNRIPLGKFAEVEHVVNAILFLL----SDRSGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp --------------CSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred --------------cChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhCCcCCcEEEECccHhh
Confidence 22455677888999999999999999999999 99999999999999999985
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8e-54 Score=391.88 Aligned_cols=244 Identities=21% Similarity=0.253 Sum_probs=223.9
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.+|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.++++.. +.++.++++|++|++++++++++
T Consensus 5 d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~-g~~~~~~~~Dvs~~~~~~~~~~~~~ 83 (255)
T d1fmca_ 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999999999875 66899999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+..+.++ +.+.++|++++++|+.++++++|+++|+|++++ .++||++||.++..
T Consensus 84 ~~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~g~Ii~isS~~~~~-------- 151 (255)
T d1fmca_ 84 SKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG---GGVILTITSMAAEN-------- 151 (255)
T ss_dssp HHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTC--------
T ss_pred HHcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc---ccccccccccchhc--------
Confidence 6899999999998877665 789999999999999999999999999999987 68999999999987
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. +|++||+|+.+|++++|.|++++|||||+|+||+|+|++.+..
T Consensus 152 --------------~~~~~~-----------------~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 200 (255)
T d1fmca_ 152 --------------KNINMT-----------------SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV 200 (255)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred --------------cccccc-----------------cchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc
Confidence 778888 9999999999999999999999999999999999999987642
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. +++..+.+.+.+|.||+++|+|++..++||+ ||+++|+|||+|.+|||+++
T Consensus 201 -----------------~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~----S~~s~~itG~~i~vDGG~~~ 252 (255)
T d1fmca_ 201 -----------------I-TPEIEQKMLQHTPIRRLGQPQDIANAALFLC----SPAASWVSGQILTVSGGGVQ 252 (255)
T ss_dssp -----------------C-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSCC
T ss_pred -----------------C-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCcCCEEEECcCccc
Confidence 1 2455677788999999999999999999999 99999999999999999753
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=6.1e-54 Score=393.53 Aligned_cols=245 Identities=26% Similarity=0.318 Sum_probs=193.8
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
.+++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++... +.++.++.+|+++++++++++++
T Consensus 2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d1xq1a_ 2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVCDASLRPEREKLMQTVS 80 (259)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999999998765 56899999999999999888765
Q ss_pred --c-CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 --A-GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 --~-~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
+ +++|++|||||...+.++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..
T Consensus 81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~---~G~Iv~isS~~~~~------- 150 (259)
T d1xq1a_ 81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG---CGNIIFMSSIAGVV------- 150 (259)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---SCEEEEEC-------------
T ss_pred HHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc---cccccccccccccc-------
Confidence 4 6899999999999999999999999999999999999999999999999887 68999999999987
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++.+.
T Consensus 151 ---------------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~ 198 (259)
T d1xq1a_ 151 ---------------SASVGS-----------------IYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA 198 (259)
T ss_dssp -------------------CC-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------
T ss_pred ---------------cccccc-----------------cccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhh
Confidence 777777 999999999999999999999999999999999999998765
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.. +++..+.+...+|.||+++|+|+++.++||+ |++++|+|||+|.+|||++.
T Consensus 199 ~~------------------~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~----S~~s~~iTG~~i~vDGG~s~ 251 (259)
T d1xq1a_ 199 VY------------------DDEFKKVVISRKPLGRFGEPEEVSSLVAFLC----MPAASYITGQTICVDGGLTV 251 (259)
T ss_dssp -------------------------------------CCGGGGHHHHHHHT----SGGGTTCCSCEEECCCCEEE
T ss_pred hc------------------hHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh----CchhcCCcCcEEEeCCCEEC
Confidence 32 3455667788899999999999999999999 99999999999999999863
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=2.6e-53 Score=389.72 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=228.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+|+||++|||||++|||+++|++|+++|++|++++|++++++++.++++.. +.++.++++|++|++++++++++ +
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDVTSEEAVIGTVDSVVRDF 80 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999999999999999998765 67899999999999999888765 6
Q ss_pred CCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||...+ .++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~---~G~II~isS~~~~~---------- 147 (260)
T d1zema1 81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN---YGRIVNTASMAGVK---------- 147 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHS----------
T ss_pred CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc---CCCCCeeechhhcc----------
Confidence 999999999998754 6799999999999999999999999999999999877 79999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++..+...
T Consensus 148 ------------~~~~~~-----------------~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~ 198 (260)
T d1zema1 148 ------------GPPNMA-----------------AYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQV 198 (260)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHH
T ss_pred ------------CCcchH-----------------HHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcch
Confidence 778888 999999999999999999999999999999999999998765432
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAG 337 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG 337 (366)
.. ...........++++..+.+...+|.||+++|+|++..++||+ |++++|+|||+|+||||
T Consensus 199 ~~---~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~----S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 199 EL---QAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLL----GDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp HH---HHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHH----SGGGTTCCSCEEEESCC
T ss_pred hh---hhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCccCCeEEeCCC
Confidence 11 0111111234578999999999999999999999999999999 99999999999999998
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.7e-54 Score=390.14 Aligned_cols=237 Identities=24% Similarity=0.315 Sum_probs=219.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++. .+..++++|++|++++++++++ +
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----ANGKGLMLNVTDPASIESVLEKIRAEF 76 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCCcEEEEEecCHHHhhhhhhhhhccc
Confidence 5899999999999999999999999999999999999999988887774 4678899999999999888765 6
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||.....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~G~II~isS~~~~~----------- 142 (243)
T d1q7ba_ 77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR---HGRIITIGSVVGTM----------- 142 (243)
T ss_dssp CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHH-----------
T ss_pred CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC---CCEeeeecchhhcC-----------
Confidence 8999999999999999999999999999999999999999999999999887 69999999999987
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. +|++||+|+.+|++++|.|++++|||||+|+||+++|++.+...
T Consensus 143 -----------~~~~~~-----------------~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~-- 192 (243)
T d1q7ba_ 143 -----------GNGGQA-----------------NYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS-- 192 (243)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC--
T ss_pred -----------CCCCCH-----------------HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh--
Confidence 778888 99999999999999999999999999999999999999876531
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
++..+.+.+.+|.||+++|+|+++.+.||+ |++++|+|||+|.+|||++
T Consensus 193 -----------------~~~~~~~~~~~pl~R~~~pedvA~~v~fL~----S~~s~~itGq~i~vdGG~~ 241 (243)
T d1q7ba_ 193 -----------------DDQRAGILAQVPAGRLGGAQEIANAVAFLA----SDEAAYITGETLHVNGGMY 241 (243)
T ss_dssp -----------------HHHHHHHHTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTSS
T ss_pred -----------------hhHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CchhcCCcCCeEEECCCeE
Confidence 334567788899999999999999999999 9999999999999999975
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=9e-54 Score=392.23 Aligned_cols=249 Identities=26% Similarity=0.367 Sum_probs=226.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~ 111 (366)
.||++|||||++|||+++|++|+++|++|++++|++++++++.++++.. +.++.++++|++|++++++++++ +++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDVRSVPEIEALVAAVVERYGP 79 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4899999999999999999999999999999999999999999999765 67899999999999999888765 699
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPL--IKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~--l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+|++|||||+....++.+.+.++|++++++|+.++++++|+++|+ |.+++ .++||+++|..+..
T Consensus 80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~---~g~Ii~i~S~~~~~----------- 145 (257)
T d2rhca1 80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG---TGRIVNIASTGGKQ----------- 145 (257)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT---EEEEEEECCGGGTS-----------
T ss_pred CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC---Cccccccccccccc-----------
Confidence 999999999998999999999999999999999999999999997 45544 58999999999987
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. +|++||+|+.+|+|+||.|++++|||||+|+||+|+|++.+.....
T Consensus 146 -----------~~~~~~-----------------~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~ 197 (257)
T d2rhca1 146 -----------GVVHAA-----------------PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREH 197 (257)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHH
T ss_pred -----------ccccch-----------------hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhh
Confidence 888888 9999999999999999999999999999999999999998765432
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.... ...++++..+.+.+.+|.||+++|+|++..++||+ |++++|+|||+|+||||++
T Consensus 198 ~~~~--------~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~----S~~s~~itG~~i~vDGG~~ 255 (257)
T d2rhca1 198 YSDI--------WEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI----GPGAAAVTAQALNVCGGLG 255 (257)
T ss_dssp HHHH--------TTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTCC
T ss_pred hhhh--------cccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCcCceEEECcCcc
Confidence 2111 13467888999999999999999999999999999 9999999999999999964
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=5.1e-53 Score=387.69 Aligned_cols=246 Identities=24% Similarity=0.250 Sum_probs=222.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
..+|+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.++++.. +.++.++++|++|++++++++++
T Consensus 2 ~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (261)
T d1geea_ 2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999864 577777777654 67899999999999999888765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||+..+.++.+.+.++|++++++|+.++++++|+++|+|++++. .++|+++||.++..
T Consensus 81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--g~~Iv~isS~~~~~-------- 150 (261)
T d1geea_ 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI--KGTVINMSSVHEKI-------- 150 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--CCEEEEECCGGGTS--------
T ss_pred HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccc--cccccccccchhcc--------
Confidence 689999999999999999999999999999999999999999999999988763 45799999999887
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. +|++||+|+.+|+++||.|++++|||||+|+||+|+|++....
T Consensus 151 --------------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~ 199 (261)
T d1geea_ 151 --------------PWPLFV-----------------HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK 199 (261)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH
T ss_pred --------------cCcccc-----------------ccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhh
Confidence 778888 9999999999999999999999999999999999999987664
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.. .++..+.+.+.+|.||+++|+|++..++||+ |++++|+|||+|.||||++.
T Consensus 200 ~~-----------------~~~~~~~~~~~~pl~R~~~pediA~~v~fL~----S~~s~~itG~~i~vDGG~sl 252 (261)
T d1geea_ 200 FA-----------------DPEQRADVESMIPMGYIGEPEEIAAVAAWLA----SSEASYVTGITLFADGGMTL 252 (261)
T ss_dssp HH-----------------SHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred cC-----------------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----CchhcCCcCCeEEECCCeeC
Confidence 32 2445567788899999999999999999999 99999999999999999974
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=3.6e-53 Score=387.88 Aligned_cols=250 Identities=21% Similarity=0.303 Sum_probs=224.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++++|++|++++++++++
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 76 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GPAACAIALDVTDQASIDRCVAELLDR 76 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999888887776 56789999999999999988765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+....++.+.+.++|++++++|+.|+++++|+++|.|.++++ .|+||++||.++..
T Consensus 77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~---------- 144 (256)
T d1k2wa_ 77 WGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGR--GGKIINMASQAGRR---------- 144 (256)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--CEEEEEECCGGGTS----------
T ss_pred hCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhcc--CCccccccchhhcc----------
Confidence 689999999999998899999999999999999999999999999998776543 68999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+++|++.+....
T Consensus 145 ------------~~~~~~-----------------~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~ 195 (256)
T d1k2wa_ 145 ------------GEALVG-----------------VYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDA 195 (256)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHH
T ss_pred ------------cccccc-----------------chhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhh
Confidence 888888 999999999999999999999999999999999999999876543
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... ...+.++..+.+...+|.||+++|+|++..++||+ |++++|+|||+|.||||..
T Consensus 196 ~~~~~--------~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~----S~~a~~iTG~~i~vDGG~~ 254 (256)
T d1k2wa_ 196 KFADY--------ENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLA----TPEADYIVAQTYNVDGGNW 254 (256)
T ss_dssp HHHHH--------HTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTT----SGGGTTCCSCEEEESTTSS
T ss_pred hhhhh--------ccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhCCccCceEEECcchh
Confidence 21111 02345667788889999999999999999999999 9999999999999999954
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=4.3e-53 Score=386.22 Aligned_cols=243 Identities=27% Similarity=0.315 Sum_probs=219.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. +.++.++++|++|++++++++++
T Consensus 2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (251)
T d1zk4a1 2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 359999999999999999999999999999999999999999998888753 45889999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||...+.++.+.+.++|++++++|+.++++++|+++|+|++++. .++||++||.++..
T Consensus 80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~--gg~Ii~isS~~~~~---------- 147 (251)
T d1zk4a1 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL--GASIINMSSIEGFV---------- 147 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS--CEEEEEECCGGGTS----------
T ss_pred hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCC--CCceEeeeccceec----------
Confidence 699999999999999999999999999999999999999999999999998763 46999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhH--hccCCcEEEEEcCCCCCCCChhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQE--VIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e--~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+.+|++++|.| ++++|||||+|+||+|+|++.+..
T Consensus 148 ------------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~ 198 (251)
T d1zk4a1 148 ------------GDPSLG-----------------AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198 (251)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS
T ss_pred ------------cCCCch-----------------hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhc
Confidence 777888 9999999999999999998 568999999999999999987653
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. . ++........+|.||+++|+|++..++||+ |++++|+|||+|.||||+|+
T Consensus 199 ~-----------------~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~----S~~s~~itG~~i~vDGG~ta 250 (251)
T d1zk4a1 199 P-----------------G-AEEAMSQRTKTPMGHIGEPNDIAYICVYLA----SNESKFATGSEFVVDGGYTA 250 (251)
T ss_dssp T-----------------T-HHHHHTSTTTCTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred C-----------------C-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHh----CchhCCCcCcEEEECccccc
Confidence 2 1 233344556789999999999999999999 99999999999999999873
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=5.6e-53 Score=384.59 Aligned_cols=241 Identities=25% Similarity=0.286 Sum_probs=213.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
.|+||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++ ...++++|++|++++++++++ +
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~ 74 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI------GGAFFQVDLEDERERVRFVEEAAYAL 74 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence 479999999999999999999999999999999999977543 33333 235689999999999888765 6
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||+..+.++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..
T Consensus 75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~---~G~Ii~isS~~~~~----------- 140 (248)
T d2d1ya1 75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG---GGAIVNVASVQGLF----------- 140 (248)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT---CEEEEEECCGGGTS-----------
T ss_pred CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc---cccccccccccccc-----------
Confidence 9999999999999999999999999999999999999999999999999876 68999999999987
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+++|++..+....
T Consensus 141 -----------~~~~~~-----------------~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~ 192 (248)
T d2d1ya1 141 -----------AEQENA-----------------AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIAL 192 (248)
T ss_dssp -----------BCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC-
T ss_pred -----------cccccc-----------------hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhc
Confidence 777777 9999999999999999999999999999999999999988764322
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. .++++..+.+.+.+|.||+++|+|++..+.||+ |++++|+|||+|.+|||+|+
T Consensus 193 ~-------------~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~----S~~s~~itG~~i~vDGG~ta 246 (248)
T d2d1ya1 193 S-------------PDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA----SEKASFITGAILPVDGGMTA 246 (248)
T ss_dssp --------------------CHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred C-------------CCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCCCcEEEcCcCccc
Confidence 1 245777788889999999999999999999999 99999999999999999974
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=9.6e-53 Score=381.78 Aligned_cols=236 Identities=29% Similarity=0.319 Sum_probs=214.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +..+++||++|++++++++++
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~ 74 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAH 74 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCeEEEEecCCHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999999998888876654 356789999999999988765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+..+.++.+.+.++|++++++|+.|+++++|+++|+|++++ .++|+++||. +..
T Consensus 75 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~~~i~~~ss~-~~~---------- 140 (242)
T d1ulsa_ 75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN---PGSIVLTASR-VYL---------- 140 (242)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CEEEEEECCG-GGG----------
T ss_pred cCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc---cceeeeeccc-ccc----------
Confidence 68999999999999999999999999999999999999999999999999876 5778777774 444
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. +|++||+|+.+|++++|.|++++|||||+|+||+++|++.+..
T Consensus 141 ------------~~~~~~-----------------~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~-- 189 (242)
T d1ulsa_ 141 ------------GNLGQA-----------------NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-- 189 (242)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--
T ss_pred ------------CCCCCc-----------------chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC--
Confidence 666677 9999999999999999999999999999999999999987542
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+++..+.+.+.+|.||+++|+|++..+.||+ |++++|+|||+|.+|||++.
T Consensus 190 -----------------~~~~~~~~~~~~pl~R~~~pedia~~v~fL~----S~~s~~itG~~i~vDGG~t~ 240 (242)
T d1ulsa_ 190 -----------------PEKVREKAIAATPLGRAGKPLEVAYAALFLL----SDESSFITGQVLFVDGGRTI 240 (242)
T ss_dssp -----------------CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTTT
T ss_pred -----------------CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----chhhCCCCCcEEEECCCccC
Confidence 3666778889999999999999999999999 99999999999999999874
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=5.5e-53 Score=386.50 Aligned_cols=248 Identities=25% Similarity=0.334 Sum_probs=223.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~id 113 (366)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++++. +.++.++++|++|++++++++++ ++++|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 78899999999999999999999999999999999999999999765 66899999999999999888765 69999
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
++|||||+....++.+.+.++|++++++|+.|+++++|+++|+|.+++. .++|+++||.++..
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--~g~Iv~isS~~~~~--------------- 143 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH--GGKIINACSQAGHV--------------- 143 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--CEEEEEECCGGGTS---------------
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcc--ccccccccchhhcc---------------
Confidence 9999999998899999999999999999999999999999999887653 58999999999887
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++...........
T Consensus 144 -------~~~~~~-----------------~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~ 199 (255)
T d1gega_ 144 -------GNPELA-----------------VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEA 199 (255)
T ss_dssp -------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHH
T ss_pred -------cCcccc-----------------cchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhh
Confidence 778888 99999999999999999999999999999999999999987654322111
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
...+.++..+.+.+.+|.||+++|+|+++.++||+ |++++|+|||+|.+|||++
T Consensus 200 --------~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~----S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 200 --------AGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA----SPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp --------HTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESSSSS
T ss_pred --------hcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhCCccCcEEEecCCEE
Confidence 01234566677888999999999999999999999 9999999999999999975
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=1.6e-52 Score=384.44 Aligned_cols=254 Identities=23% Similarity=0.337 Sum_probs=224.2
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
|.++|+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+.++.++++|++|++++++++++
T Consensus 1 p~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~ 80 (260)
T d1h5qa_ 1 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ 80 (260)
T ss_dssp CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999998877788999999999999999888765
Q ss_pred ----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|++|||||...+.++.+.+.++|++++++|+.|+++++|++.|+|.+++. .++|++++|.....
T Consensus 81 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--~g~i~~~~s~~~~~------ 152 (260)
T d1h5qa_ 81 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ--KGSIVVTSSMSSQI------ 152 (260)
T ss_dssp HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--CEEEEEECCGGGTS------
T ss_pred HHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc--ceEEEEeecccccc------
Confidence 689999999999998999999999999999999999999999999999976553 67888888876543
Q ss_pred CccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChh
Q 017757 185 NMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~ 264 (366)
... ....+.++...|++||+|+.+|+|++|.|++++|||||+|+||+|+|++..
T Consensus 153 ----------------~~~----------~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~ 206 (260)
T d1h5qa_ 153 ----------------INQ----------SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA 206 (260)
T ss_dssp ----------------CCE----------EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred ----------------ccc----------cccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh
Confidence 110 000112233389999999999999999999999999999999999999876
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.. +++..+.+.+.+|.||+++|+|+++.++||+ |++++|+|||+|.||||++
T Consensus 207 ~~-------------------~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~----S~~s~~itG~~i~VDGG~~ 258 (260)
T d1h5qa_ 207 HM-------------------DKKIRDHQASNIPLNRFAQPEEMTGQAILLL----SDHATYMTGGEYFIDGGQL 258 (260)
T ss_dssp GS-------------------CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHH----SGGGTTCCSCEEEECTTGG
T ss_pred cc-------------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----cchhCCCcCceEEECCCee
Confidence 52 2566678888999999999999999999999 9999999999999999986
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=7.6e-53 Score=383.66 Aligned_cols=241 Identities=26% Similarity=0.303 Sum_probs=203.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+|+||++|||||++|||+++|++|+++|++|++++|++.+ +..+.++ ..+.++.++++|++|++++++++++ +
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~-~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 78 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTF 78 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHH-HcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999999999998753 2223333 3377899999999999999888765 6
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||+....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~G~Iv~isS~~~~~----------- 144 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG---WGRIINLTSTTYWL----------- 144 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGGS-----------
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC---CCCccccccchhcc-----------
Confidence 9999999999999999999999999999999999999999999999999987 69999999999987
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++.+.....
T Consensus 145 -----------~~~~~~-----------------~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~ 196 (247)
T d2ew8a1 145 -----------KIEAYT-----------------HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS 196 (247)
T ss_dssp -----------CCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------
T ss_pred -----------cCcccc-----------------cchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc
Confidence 777888 9999999999999999999999999999999999999987653221
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+..........+.+|+++|+|+++.++||+ |++++|+|||+|.||||+++
T Consensus 197 -----------------~~~~~~~~~~~~l~r~~~pedvA~~v~fL~----S~~s~~itG~~i~vDGG~~~ 246 (247)
T d2ew8a1 197 -----------------AMFDVLPNMLQAIPRLQVPLDLTGAAAFLA----SDDASFITGQTLAVDGGMVR 246 (247)
T ss_dssp ------------------------CTTSSSCSCCCTHHHHHHHHHHT----SGGGTTCCSCEEEESSSCCC
T ss_pred -----------------hhHHHHHHHhccCCCCCCHHHHHHHHHHHh----CchhcCCcCCeEEECCCEec
Confidence 111111112247899999999999999999 99999999999999999863
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=9.5e-53 Score=381.92 Aligned_cols=236 Identities=25% Similarity=0.307 Sum_probs=215.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
-+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .++.++++|++|++++++++++
T Consensus 2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (244)
T d1nffa_ 2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAVTA 77 (244)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----CcceEEEeecCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999888887774 4688999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||.....++++.+.++|++++++|+.++++++|++.|+|++++ .|+||++||.++..
T Consensus 78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~G~Ii~isS~~~~~---------- 144 (244)
T d1nffa_ 78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG---RGSIINISSIEGLA---------- 144 (244)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS----------
T ss_pred hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC---cceEEecccccccc----------
Confidence 68999999999999899999999999999999999999999999999999987 68999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+|++.+...+
T Consensus 145 ------------~~~~~~-----------------~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~ 195 (244)
T d1nffa_ 145 ------------GTVACH-----------------GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE 195 (244)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT
T ss_pred ------------cccccc-----------------chhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH
Confidence 777788 999999999999999999999999999999999999998754321
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFV 342 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~ 342 (366)
. ...+|.+|+++|+|++..++||+ |++++|+|||+|.||||+++.+
T Consensus 196 ~------------------------~~~~pl~R~~~p~diA~~v~fL~----s~~s~~itG~~i~vDGG~~ag~ 241 (244)
T d1nffa_ 196 D------------------------IFQTALGRAAEPVEVSNLVVYLA----SDESSYSTGAEFVVDGGTVAGL 241 (244)
T ss_dssp T------------------------CSCCSSSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGGSC
T ss_pred H------------------------HHhccccCCCCHHHHHHHHHHHh----ChhhCCCcCCEEEECCCeeccc
Confidence 1 12468899999999999999999 9999999999999999998654
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=4.4e-53 Score=386.37 Aligned_cols=238 Identities=28% Similarity=0.339 Sum_probs=216.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++++|+++++++++++++ +
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999999999999999999998888777665 45789999999999999988765 6
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||+..+.++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~---~G~II~isS~~~~~----------- 143 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG---GGSIVNISSAAGLM----------- 143 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS-----------
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC---CCeecccccchhcc-----------
Confidence 8999999999999999999999999999999999999999999999999887 69999999999987
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|++||+|+.+|+++||.|++++|||||+|+||+|+|++..+....
T Consensus 144 -----------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~ 195 (254)
T d1hdca_ 144 -----------GLALTS-----------------SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR 195 (254)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC
T ss_pred -----------cccchh-----------------hHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH
Confidence 777888 9999999999999999999999999999999999999988764332
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeE-eeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFI-VPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~-~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. .+.....+|.||++ .|+|++..++||+ |++++|+|||+|.||||||.
T Consensus 196 ~-------------------~~~~~~~~pl~R~g~~PedvA~~v~fL~----S~~a~~itG~~i~vDGG~t~ 244 (254)
T d1hdca_ 196 Q-------------------GEGNYPNTPMGRVGNEPGEIAGAVVKLL----SDTSSYVTGAELAVDGGWTT 244 (254)
T ss_dssp C-------------------STTSCTTSTTSSCB-CHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTTT
T ss_pred H-------------------HHHHHhCCCCCCCCCCHHHHHHHHHHHh----chhhCCCCCceEEeCCCccC
Confidence 1 12234567899998 5999999999999 99999999999999999984
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=7.3e-52 Score=379.43 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=221.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++... +..+.++.+|+++++++++++++
T Consensus 1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~ 79 (258)
T d1ae1a_ 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDLLSRTERDKLMQTVAH 79 (258)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCceEEEeecCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999888765 67788999999999999888764
Q ss_pred -c-CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 -A-GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 -~-~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
+ +.+|++|||||.....++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||.++..
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~---~g~ii~isS~~~~~-------- 148 (258)
T d1ae1a_ 80 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ---NGNVIFLSSIAGFS-------- 148 (258)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---SEEEEEECCGGGTS--------
T ss_pred HhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc---cccccccccccccc--------
Confidence 4 6899999999999999999999999999999999999999999999999987 78999999999987
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|+++|+|+.+|++++|.|++++|||||+|+||+++|++.+..
T Consensus 149 --------------~~~~~~-----------------~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~ 197 (258)
T d1ae1a_ 149 --------------ALPSVS-----------------LYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA 197 (258)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------
T ss_pred --------------ccccch-----------------hHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhh
Confidence 778888 9999999999999999999999999999999999999998764
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.... ..+++..+.+...+|.||++.|+|++..++||+ |++++|+|||+|.||||++.
T Consensus 198 ~~~~-------------~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~----S~~s~~itG~~i~vDGG~s~ 254 (258)
T d1ae1a_ 198 IKKN-------------PHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC----FPAASYITGQIIWADGGFTA 254 (258)
T ss_dssp -------------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred hhhh-------------hhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----ChhhCCCcCcEEEeCCCeec
Confidence 4322 123667778888999999999999999999999 99999999999999999985
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-52 Score=381.60 Aligned_cols=241 Identities=24% Similarity=0.304 Sum_probs=216.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++. ++.++++|++|++++++++++ +
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-----~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSETIRRF 77 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-----CCeEEEccCCCHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999999999988888776653 578899999999999988765 6
Q ss_pred CCCcEEEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||... ..++++.+.++|++++++|+.++++++|+++|+|+++ .|+||++||.++..
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~----~G~Ii~isS~~~~~---------- 143 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS----QGNVINISSLVGAI---------- 143 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEECCHHHHH----------
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC----CCCCcccccccccc----------
Confidence 89999999999765 4678899999999999999999999999999999875 48999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++.++...
T Consensus 144 ------------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~ 194 (250)
T d1ydea1 144 ------------GQAQAV-----------------PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAA 194 (250)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHT
T ss_pred ------------cccCcc-----------------hhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhh
Confidence 777777 999999999999999999999999999999999999998876543
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.. .++++..+.....+|.||+++|+|++..++||+ |+ ++|+|||+|.||||+++
T Consensus 195 ~~-------------~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~----Sd-a~~itG~~i~vDGG~~l 248 (250)
T d1ydea1 195 LM-------------PDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA----SE-ANFCTGIELLVTGGAEL 248 (250)
T ss_dssp TS-------------SSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH----HH-CTTCCSCEEEESTTTTS
T ss_pred cC-------------CCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----Cc-cCCCcCCeEEECCCccc
Confidence 32 235666677778889999999999999999999 86 78999999999999874
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=4.8e-52 Score=377.63 Aligned_cols=236 Identities=27% Similarity=0.353 Sum_probs=217.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEe-cCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
+++|||||++|||+++|++|+++|++|++++ |+++.++++.++++.. +.++.++++|++|++++++++++ ++++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999999875 5677788888888755 67899999999999999888765 6999
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|++|||||.....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~G~IVnisS~~~~~-------------- 143 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR---KGRIINIASVVGLI-------------- 143 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCTHHHH--------------
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC---CcEEEEEcChhhcC--------------
Confidence 9999999999999999999999999999999999999999999999887 79999999999988
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCc
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPR 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~ 272 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+++|++.+..
T Consensus 144 --------~~~~~~-----------------~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~------ 192 (244)
T d1edoa_ 144 --------GNIGQA-----------------NYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL------ 192 (244)
T ss_dssp --------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT------
T ss_pred --------CCCCCH-----------------HHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh------
Confidence 777888 9999999999999999999999999999999999999987652
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHH-HhcCCCCchhHHHHHHHHHHHHHH
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSI-ATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L-~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+++..+.+.+.+|.||+++|+|+++.+.|| . ||+++|+|||+|.+|||++
T Consensus 193 -------------~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~----S~~a~~itG~~i~vdGG~s 243 (244)
T d1edoa_ 193 -------------GEDMEKKILGTIPLGRTGQPENVAGLVEFLAL----SPAASYITGQAFTIDGGIA 243 (244)
T ss_dssp -------------CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHH----CSGGGGCCSCEEEESTTTT
T ss_pred -------------hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHC----CchhcCCcCCeEEeCCCee
Confidence 255667888899999999999999999999 6 9999999999999999976
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.6e-52 Score=377.73 Aligned_cols=230 Identities=27% Similarity=0.395 Sum_probs=204.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+++||++|||||++|||+++|++|+++|++|++++|+.+.+ .++..+++|++|++++++++++
T Consensus 3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------KGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh------------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999999987653 3567899999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||+..+.++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~g~Iv~isS~~~~~---------- 137 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK---FGRMIFIGSVSGLW---------- 137 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCCCC------------
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC---CCceEEEcchhhcc----------
Confidence 68999999999999899999999999999999999999999999999999987 68999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+++|++.+..
T Consensus 138 ------------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~-- 186 (237)
T d1uzma1 138 ------------GIGNQA-----------------NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-- 186 (237)
T ss_dssp ---------------CCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--
T ss_pred ------------CCcccH-----------------HHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc--
Confidence 777777 9999999999999999999999999999999999999987652
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+++..+.+.+.+|.||+++|+|+++.+.||+ |++++|+|||+|.+|||++
T Consensus 187 -----------------~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~----S~~s~~itG~~i~vdGG~~ 236 (237)
T d1uzma1 187 -----------------DERIQQGALQFIPAKRVGTPAEVAGVVSFLA----SEDASYISGAVIPVDGGMG 236 (237)
T ss_dssp -----------------CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred -----------------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCcCCeEEECCCCC
Confidence 2556677888999999999999999999999 9999999999999999975
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=2.9e-51 Score=377.77 Aligned_cols=252 Identities=21% Similarity=0.269 Sum_probs=219.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.. ...+.++++|++|++++++++++
T Consensus 2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (268)
T d2bgka1 2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDEDVRNLVDTTIAK 79 (268)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 469999999999999999999999999999999999999999999988864 34577899999999999988765
Q ss_pred cCCCcEEEEcCCCCCCC--CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 AGPVDVLVVNQGVFVPG--ELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||..... .+.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||..+..
T Consensus 80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~---~g~ii~iss~~~~~-------- 148 (268)
T d2bgka1 80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK---KGSIVFTASISSFT-------- 148 (268)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT---CEEEEEECCGGGTC--------
T ss_pred cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC---CCCccccccccccc--------
Confidence 69999999999986543 578899999999999999999999999999999877 68999999998876
Q ss_pred cCccccccccccCCCCCC-ccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 187 KGINENKLCESSGKGHGG-YHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++ .. .|++||+|+.+|++++|.|++++|||||+|+||+++|++..+
T Consensus 149 --------------~~~~~~~-----------------~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~ 197 (268)
T d2bgka1 149 --------------AGEGVSH-----------------VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD 197 (268)
T ss_dssp --------------CCTTSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTT
T ss_pred --------------ccccccc-----------------ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhh
Confidence 4433 34 799999999999999999999999999999999999998765
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHH-hhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKAL-DGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVAL 344 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~~~ 344 (366)
.... ++++..+... ...+.||+++|+|++..++||+ |++++|+|||+|.||||+|+.-+.
T Consensus 198 ~~~~---------------~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~----S~~s~~itGq~i~VDGG~t~~~p~ 258 (268)
T d2bgka1 198 VFGV---------------DSSRVEELAHQAANLKGTLLRAEDVADAVAYLA----GDESKYVSGLNLVIDGGYTRTNPA 258 (268)
T ss_dssp SSSC---------------CHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGGCCTH
T ss_pred hhcC---------------CHHHHHHHHHhccccCCCCcCHHHHHHHHHHHh----ChhhCCccCceEEECcCcccCCCC
Confidence 4321 2333333222 2347889999999999999999 999999999999999999987766
Q ss_pred Hhh
Q 017757 345 CFQ 347 (366)
Q Consensus 345 ~~~ 347 (366)
+|.
T Consensus 259 ~p~ 261 (268)
T d2bgka1 259 FPT 261 (268)
T ss_dssp HHH
T ss_pred Chh
Confidence 665
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=5.1e-51 Score=375.25 Aligned_cols=250 Identities=24% Similarity=0.286 Sum_probs=205.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.... +.++.++++|++|++++++++++
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999998753 34699999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc-ccccccc
Q 017757 109 -AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA-GQCWTIK 182 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~-~~~~~~~ 182 (366)
++++|++|||||...+ ..+.+.+.|+|++++++|+.++++++|+++|+|++++ +++|+++|.. +..
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~----g~iI~~~S~~~~~~---- 153 (264)
T d1spxa_ 82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK----GEIVNISSIASGLH---- 153 (264)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCTTSSSS----
T ss_pred HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc----Ccceeeeeeccccc----
Confidence 6999999999998654 3456679999999999999999999999999998864 5666666655 455
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+.+|+++||.|++++|||||+|+||+|+|++
T Consensus 154 ------------------~~~~~~-----------------~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~ 198 (264)
T d1spxa_ 154 ------------------ATPDFP-----------------YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 198 (264)
T ss_dssp ------------------CCTTSH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred ------------------cCCCch-----------------hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 667777 999999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCC-chhHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSP-QRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~-~~~~itG~~i~~dgG~~~ 340 (366)
.......... ....++..+.+.+.+|.||+++|+|+++.+.||+ |+ .++|+|||+|.||||++.
T Consensus 199 ~~~~~~~~~~----------~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~----S~~~s~~itG~~i~vDGG~sl 263 (264)
T d1spxa_ 199 GSAMGMPEET----------SKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA----DRKTSSYIIGHQLVVDGGSSL 263 (264)
T ss_dssp ------------------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHH----CHHHHTTCCSCEEEESTTGGG
T ss_pred hhccCCcHHH----------HHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CCcccCCccCceEEeCCChhh
Confidence 7754322111 1123455567788899999999999999999999 95 589999999999999874
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=1.2e-51 Score=376.90 Aligned_cols=243 Identities=21% Similarity=0.279 Sum_probs=215.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.+..++++|++|++++++++++
T Consensus 2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 77 (253)
T d1hxha_ 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence 4699999999999999999999999999999999999999888887776 45788999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||...+.++.+.+.++|++++++|+.++++++|+++|+|+++ .|+||++||.++..
T Consensus 78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~----~G~Iv~isS~~~~~---------- 143 (253)
T d1hxha_ 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET----GGSIINMASVSSWL---------- 143 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT----CEEEEEECCGGGTS----------
T ss_pred hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc----CCceecccchhhhc----------
Confidence 6899999999999988999999999999999999999999999999999754 58999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc--CCcEEEEEcCCCCCCCChhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA--DDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~--~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. +|++||+|+.+|++++|.|+++ +|||||+|+||+|+|++.+..
T Consensus 144 ------------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~ 194 (253)
T d1hxha_ 144 ------------PIEQYA-----------------GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS 194 (253)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH
T ss_pred ------------Cccccc-----------------cccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhh
Confidence 778888 9999999999999999999997 459999999999999987654
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.... ..++.........+.||+++|+|+++.++||+ |++++|+|||+|.||||++.
T Consensus 195 ~~~~--------------~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~----S~~s~~itG~~i~VDGG~~~ 250 (253)
T d1hxha_ 195 LPKG--------------VSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA----SDESSVMSGSELHADNSILG 250 (253)
T ss_dssp SCTT--------------CCHHHHBCBTTTBTTCCEECHHHHHHHHHHHH----SGGGTTCCSCEEEESSSCTT
T ss_pred Ccch--------------hhHHHHHhCccccccCCCCCHHHHHHHHHHHh----ChhhCCCcCcEEEECccHhh
Confidence 3221 11333334445567899999999999999999 99999999999999999764
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=2.7e-51 Score=378.70 Aligned_cols=251 Identities=24% Similarity=0.276 Sum_probs=213.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.. +.++.++++|++|++++++++++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999997653 35799999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCCCc----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC-Ccccccccc
Q 017757 109 -AGPVDVLVVNQGVFVPGEL----EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS-QAGQCWTIK 182 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS-~~~~~~~~~ 182 (366)
++++|++|||||...+..+ .+.+.++|++++++|+.++++++|+++|+|++++ +++|+++| .++..
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~----g~iI~~~Ss~a~~~---- 153 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK----GEIVNVSSIVAGPQ---- 153 (272)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCGGGSSS----
T ss_pred HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC----Cccccccchhcccc----
Confidence 6899999999999876544 4678889999999999999999999999999864 45555555 56666
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.++.. .|++||+|+.+|+++||.|++++|||||+|+||+|+|++
T Consensus 154 ------------------~~~~~~-----------------~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 198 (272)
T d1xkqa_ 154 ------------------AQPDFL-----------------YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 198 (272)
T ss_dssp ------------------CCCSSH-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred ------------------CCCCcc-----------------hhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchh
Confidence 777777 999999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCc-hhHHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQ-RSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~-~~~itG~~i~~dgG~~~~ 341 (366)
........... ...++..+...+.+|.||+++|+|+++.++||+ |++ +.|+|||+|+||||+++.
T Consensus 199 ~~~~~~~~~~~----------~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~----S~~as~~iTG~~i~vDGG~~l~ 264 (272)
T d1xkqa_ 199 TNAMGMPDQAS----------QKFYNFMASHKECIPIGAAGKPEHIANIILFLA----DRNLSFYILGQSIVADGGTSLV 264 (272)
T ss_dssp HHHTTCCHHHH----------HHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH----CHHHHTTCCSCEEEESTTGGGC
T ss_pred hhccCCchHHH----------HHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh----CcchhCCccCeEEEeCcCHHHh
Confidence 87643211000 011333344556789999999999999999999 976 679999999999999865
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-50 Score=378.80 Aligned_cols=248 Identities=21% Similarity=0.235 Sum_probs=221.5
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh----cCCeEEEEEecCCCHHHHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA----TGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~----~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+-.|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... .+.++.++++|++|+++++++++
T Consensus 7 ~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 86 (297)
T d1yxma1 7 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 86 (297)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999988753 35689999999999999998876
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
+ ++++|++|||||.....++.+.+.++|++++++|+.|+++++|+++|+|++++ .++||++||. +..
T Consensus 87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~---~g~Ii~~ss~-~~~----- 157 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH---GGSIVNIIVP-TKA----- 157 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH---CEEEEEECCC-CTT-----
T ss_pred HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc---cccccccccc-ccc-----
Confidence 5 68999999999999899999999999999999999999999999999999987 6889988764 333
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++.
T Consensus 158 -----------------~~~~~~-----------------~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~ 203 (297)
T d1yxma1 158 -----------------GFPLAV-----------------HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTA 203 (297)
T ss_dssp -----------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGG
T ss_pred -----------------cccccc-----------------cchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcch
Confidence 556666 9999999999999999999999999999999999999987
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
.+.... .+++..+...+.+|.||+++|+|+++.++||+ |++++|+|||+|.||||++..
T Consensus 204 ~~~~~~---------------~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~----Sd~s~~iTG~~i~VDGG~sl~ 262 (297)
T d1yxma1 204 VENYGS---------------WGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLL----SPAASFITGQSVDVDGGRSLY 262 (297)
T ss_dssp GTTSGG---------------GGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGGC
T ss_pred hhhccc---------------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCcCCcEEEeCcChhhh
Confidence 543221 12444556677889999999999999999999 999999999999999999864
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=5.9e-51 Score=376.72 Aligned_cols=252 Identities=23% Similarity=0.262 Sum_probs=217.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC--CeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+... .++.++++|++|++++++++++
T Consensus 1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999987642 4789999999999999888765
Q ss_pred -cCCCcEEEEcCCCCCCC--CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 109 -AGPVDVLVVNQGVFVPG--ELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
++++|++|||||..... ...+.+.++|++++++|+.++++++|+++|+|++++ .++|+++||.++..
T Consensus 81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~---~g~ii~~ss~~~~~------- 150 (274)
T d1xhla_ 81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK---GEIVNVSSIVAGPQ------- 150 (274)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEECCGGGSSS-------
T ss_pred HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc---cccccchhhhhccc-------
Confidence 68999999999976543 455678999999999999999999999999999876 68999999988876
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+|++...
T Consensus 151 ---------------~~~~~~-----------------~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~ 198 (274)
T d1xhla_ 151 ---------------AHSGYP-----------------YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGA 198 (274)
T ss_dssp ---------------CCTTSH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHH
T ss_pred ---------------cCCCCc-----------------eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhh
Confidence 777777 999999999999999999999999999999999999998766
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCC-chhHHHHHHHHHHHHHHHH
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSP-QRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~-~~~~itG~~i~~dgG~~~~ 341 (366)
........ ...++..+...+.+|.||+++|+|+++.++||+ |+ +++|+|||+|.+|||++..
T Consensus 199 ~~~~~~~~----------~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~----S~d~s~~itG~~i~vDGG~~l~ 261 (274)
T d1xhla_ 199 MGLPETAS----------DKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA----DRNLSSYIIGQSIVADGGSTLV 261 (274)
T ss_dssp TTCCHHHH----------HHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH----CHHHHTTCCSCEEEESTTGGGC
T ss_pred hcccchhh----------HHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc----CCccccCccCcEEEeCcCHHHh
Confidence 42211000 011233334456689999999999999999999 95 7999999999999999864
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=3e-50 Score=372.37 Aligned_cols=247 Identities=24% Similarity=0.307 Sum_probs=210.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++..+.+|+++++++++++++
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----GDNVLGIVGDVRSLEDQKQAASRCVAR 76 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeeEEecccccHHHHHHHHHHHHHH
Confidence 6799999999999999999999999999999999999998887766654 45799999999999999888765
Q ss_pred cCCCcEEEEcCCCCCCCC-----ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 AGPVDVLVVNQGVFVPGE-----LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||||+..... ..+.+.++|++++++|+.|+++++|+++|+|++++ |+||+++|.++..
T Consensus 77 ~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~----g~iI~i~S~~~~~----- 147 (276)
T d1bdba_ 77 FGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR----GNVIFTISNAGFY----- 147 (276)
T ss_dssp HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CEEEEECCGGGTS-----
T ss_pred hCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC----CCceeeeechhcc-----
Confidence 699999999999865432 24455678999999999999999999999998763 7999999998887
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.++.. .|++||+|+.+|+|++|.|++++ ||||+|+||+|+|++.
T Consensus 148 -----------------~~~~~~-----------------~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~ 192 (276)
T d1bdba_ 148 -----------------PNGGGP-----------------LYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLR 192 (276)
T ss_dssp -----------------TTSSCH-----------------HHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCC
T ss_pred -----------------CCCCCc-----------------hHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcC
Confidence 777777 99999999999999999999985 9999999999999987
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCC-chhHHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSP-QRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~-~~~~itG~~i~~dgG~~~ 340 (366)
........ ......++..+.+...+|.||+++|+|+++.++||+ |+ +++|+|||+|.||||++.
T Consensus 193 ~~~~~~~~---------~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~----S~~~a~~itG~~i~VDGG~~~ 257 (276)
T d1bdba_ 193 GPSSLGMG---------SKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFA----TRGDAAPATGALLNYDGGLGV 257 (276)
T ss_dssp CCGGGC------------------CHHHHHTTTCTTSSCCCGGGGSHHHHHHH----CHHHHTTCSSCEEEESSSGGG
T ss_pred Cccchhhh---------hhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc----CCcccCCeeCcEEEECcChhh
Confidence 65322111 012345667778888999999999999999999999 84 799999999999999873
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.6e-50 Score=364.08 Aligned_cols=230 Identities=24% Similarity=0.297 Sum_probs=209.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
|+||++|||||++|||+++|++|+++|++|++++|+++.+++. ...++.+|+++ +++.++++++++|+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~----------~~~~~~~Dv~~--~~~~~~~~~g~iD~ 69 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS----------GHRYVVCDLRK--DLDLLFEKVKEVDI 69 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT----------CSEEEECCTTT--CHHHHHHHSCCCSE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc----------CCcEEEcchHH--HHHHHHHHhCCCcE
Confidence 7999999999999999999999999999999999997665432 23467899986 47888999999999
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
+|||||.....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||+++|..+..
T Consensus 70 lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---~G~ii~i~S~~~~~---------------- 130 (234)
T d1o5ia_ 70 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG---WGRIVAITSFSVIS---------------- 130 (234)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS----------------
T ss_pred EEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc---cccccccccccccc----------------
Confidence 99999998889999999999999999999999999999999999877 68999999998876
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcch
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~ 274 (366)
+.+... .|++||+|+.+|+|++|.|++++|||||+|+||+++|++.++..
T Consensus 131 ------~~~~~~-----------------~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~------- 180 (234)
T d1o5ia_ 131 ------PIENLY-----------------TSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL------- 180 (234)
T ss_dssp ------CCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS-------
T ss_pred ------cccccc-----------------cchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhc-------
Confidence 777777 99999999999999999999999999999999999999887642
Q ss_pred hhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 275 SIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 275 ~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
+++..+.+.+.+|.||+++|+|+++.++||+ |++++|+|||+|.+|||+++
T Consensus 181 -----------~~~~~~~~~~~~pl~R~~~pediA~~v~fL~----S~~s~~itG~~i~vDGG~s~ 231 (234)
T d1o5ia_ 181 -----------SEEKKKQVESQIPMRRMAKPEEIASVVAFLC----SEKASYLTGQTIVVDGGLSK 231 (234)
T ss_dssp -----------CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTCCC
T ss_pred -----------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----ChhhcCCcCcEEEECccccc
Confidence 2455677888999999999999999999999 99999999999999999874
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-49 Score=360.81 Aligned_cols=242 Identities=23% Similarity=0.312 Sum_probs=219.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+ ...+....+|+++.+.++...++++++|
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~id 76 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK------YPGIQTRVLDVTKKKQIDQFANEVERLD 76 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG------STTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh------ccCCceeeeeccccccccccccccccce
Confidence 4999999999999999999999999999999999999877665432 2357788999999999999999999999
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
++|||||...+.++.+.+.++|++.+++|+.++++++|++.|+|.+++ .|+||++||.++..
T Consensus 77 ~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~---~g~Ii~isS~~~~~--------------- 138 (245)
T d2ag5a1 77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK---SGNIINMSSVASSV--------------- 138 (245)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCSBTTT---------------
T ss_pred eEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC---Cceeeeeechhhcc---------------
Confidence 999999999999999999999999999999999999999999999887 78999999987642
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
++.+... .|+++|+|+++|+|++|.|++++|||||+|+||+|+|++.+......
T Consensus 139 ------~~~~~~~-----------------~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~--- 192 (245)
T d2ag5a1 139 ------KGVVNRC-----------------VYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQAR--- 192 (245)
T ss_dssp ------BCCTTBH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHS---
T ss_pred ------CCccchh-----------------HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhh---
Confidence 0556666 99999999999999999999999999999999999999887754432
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..+++..+.+...+|.||+++|+|++..+.||+ ||+++|+|||+|+||||+|
T Consensus 193 ----------~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~----s~~s~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 193 ----------GNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA----SDESAYVTGNPVIIDGGWS 244 (245)
T ss_dssp ----------SSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHH----SGGGTTCCSCEEEECTTGG
T ss_pred ----------hhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----ChhhCCCcCceEEeCCCcC
Confidence 356788888999999999999999999999999 9999999999999999987
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=9.4e-50 Score=361.87 Aligned_cols=234 Identities=25% Similarity=0.297 Sum_probs=206.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|+++++++++++++ +
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~i~~~~~~i~~~~ 77 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVADVSDPKAVEAVFAEALEEF 77 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999999998877665544 56889999999999999988876 5
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||...+.++.+.+.++|++++++|+.+++.++|+++|+|++ .++|+++||.+..
T Consensus 78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~-----~~~i~~~ss~a~~------------ 140 (241)
T d2a4ka1 78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE-----GGSLVLTGSVAGL------------ 140 (241)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT-----TCEEEEECCCTTC------------
T ss_pred CCccEeccccccccccchhhhhcccccccccccccccccccccccccccc-----ccceeeccccccc------------
Confidence 89999999999988899999999999999999999999999999999876 3567777765543
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.++.. .|+++|+|+++|++++|.|++++|||||+|+||+++|++.+..
T Consensus 141 -----------~~~~~~-----------------~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--- 189 (241)
T d2a4ka1 141 -----------GAFGLA-----------------HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--- 189 (241)
T ss_dssp -----------CHHHHH-----------------HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---
T ss_pred -----------cccCcc-----------------ccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh---
Confidence 445556 8999999999999999999999999999999999999976531
Q ss_pred CCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+++..+.+.+.+|.+|+++|+|+++.++||+ |++++|+|||+|.+|||++
T Consensus 190 ----------------~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~----S~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 190 ----------------PPWAWEQEVGASPLGRAGRPEEVAQAALFLL----SEESAYITGQALYVDGGRS 239 (241)
T ss_dssp ----------------CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTTT
T ss_pred ----------------hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHh----cchhCCCcCceEEeCCCcc
Confidence 3566778888999999999999999999999 9999999999999999987
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=3.4e-50 Score=367.24 Aligned_cols=238 Identities=17% Similarity=0.102 Sum_probs=207.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH----hcCCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD----EAGPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~----~~~~id~ 114 (366)
++|||||++|||+++|++|+++|++|++++|+.++++++.+.... +.++|++++++++++++ +++++|+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iDi 74 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------YPQLKPMSEQEPAELIEAVTSAYGQVDV 74 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-------CTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc-------EEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999999999888776543322 34689998888777665 4799999
Q ss_pred EEEcCCCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 115 LVVNQGVFV-PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 115 vi~nAG~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
+|||||... ..++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||++||.++..
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~---~G~IV~isS~~~~~--------------- 136 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK---SGHIIFITSATPFG--------------- 136 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CCEEEEECCSTTTS---------------
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc---cceeeccccccccc---------------
Confidence 999999865 47889999999999999999999999999999999987 68999999999987
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcc
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRL 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~ 273 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+|++..........
T Consensus 137 -------~~~~~~-----------------~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~- 191 (252)
T d1zmta1 137 -------PWKELS-----------------TYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPW- 191 (252)
T ss_dssp -------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHH-
T ss_pred -------cccccc-----------------ccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccc-
Confidence 777777 9999999999999999999999999999999999999987653221100
Q ss_pred hhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 274 TSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 274 ~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
...++..+.+.+.+|.||+++|+|+++.+.||+ |++++|+|||+|.||||+++
T Consensus 192 ----------~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~----S~~s~~iTG~~i~vdGG~~~ 244 (252)
T d1zmta1 192 ----------KTNPEHVAHVKKVTALQRLGTQKELGELVAFLA----SGSCDYLTGQVFWLAGGFPM 244 (252)
T ss_dssp ----------TTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHH----TTSCGGGTTCEEEESTTCCC
T ss_pred ----------cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhcCCcCCeEEECCCcee
Confidence 122455678888999999999999999999999 99999999999999999875
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=8.5e-49 Score=359.42 Aligned_cols=252 Identities=19% Similarity=0.238 Sum_probs=220.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec-CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.+|+||++|||||++|||+++|++|+++|++|+++++ +.+.++++.++++.. +.++.++++|++|++++++++++
T Consensus 2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (259)
T d1ja9a_ 2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADISKPSEVVALFDKAVS 80 (259)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc-CCCceEecCCCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999998755 555677777777654 67899999999999999888764
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||.....++.+.+.++|++.+++|+.++++++|.++|+|+++ +++++++|..+..
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----g~~iii~s~~~~~--------- 146 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-----GRIILTSSIAAVM--------- 146 (259)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-----EEEEEECCGGGTC---------
T ss_pred HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-----Ccccccccccccc---------
Confidence 6899999999999989999999999999999999999999999999999763 5777777766533
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
.+.++.. .|++||+|+.+|+|+||.|++++|||||+|+||+++|++.++..
T Consensus 147 ------------~~~~~~~-----------------~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~ 197 (259)
T d1ja9a_ 147 ------------TGIPNHA-----------------LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENS 197 (259)
T ss_dssp ------------CSCCSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHG
T ss_pred ------------cCCCCch-----------------hHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhh
Confidence 0456666 99999999999999999999999999999999999999988754
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
..... ......+++++.+.+.+.+|.+|+++|+|+++.++||+ |++++|+|||+|.+|||+
T Consensus 198 ~~~~~------~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~----S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 198 WHYAP------GGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC----QEESEWINGQVIKLTGGG 258 (259)
T ss_dssp GGTST------TCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTC
T ss_pred hhhhh------hhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh----CchhcCCcCceEEeCCCC
Confidence 33211 11224578899999999999999999999999999999 999999999999999995
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.3e-49 Score=360.74 Aligned_cols=243 Identities=17% Similarity=0.169 Sum_probs=207.3
Q ss_pred CCcCCCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 31 VRIPIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
+.++|+||++|||||+| |||+++|++|+++|++|++++|+++..+++ +++... +.+..++++|++|++++++++++
T Consensus 2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~ 79 (256)
T d1ulua_ 2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEA-LGGALLFRADVTQDEELDALFAG 79 (256)
T ss_dssp EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHH-TTCCEEEECCTTCHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhc-cCcccccccccCCHHHHHHHHHH
Confidence 35689999999999987 999999999999999999999987655544 334333 44667899999999999988765
Q ss_pred ----cCCCcEEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 109 ----AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
++++|++|||||.... ..+.+.+.++|+..+++|+.+++.++|++.|+|++ .|+||++||.++..
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-----~G~Iv~isS~~~~~-- 152 (256)
T d1ulua_ 80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-----GGGIVTLTYYASEK-- 152 (256)
T ss_dssp HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-----EEEEEEEECGGGTS--
T ss_pred HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-----CCEEEEEeehHhcC--
Confidence 6899999999998643 45678899999999999999999999999999876 47999999999887
Q ss_pred ccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 181 IKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+++|
T Consensus 153 --------------------~~~~~~-----------------~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t 195 (256)
T d1ulua_ 153 --------------------VVPKYN-----------------VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRT 195 (256)
T ss_dssp --------------------BCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--
T ss_pred --------------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeee
Confidence 777778 9999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
++..... ..++..+.+.+.+|.||+++|+|+++.++||+ |++++|+|||+|.||||++.
T Consensus 196 ~~~~~~~-----------------~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~----S~~s~~itG~~i~VDGG~~~ 254 (256)
T d1ulua_ 196 VAARSIP-----------------GFTKMYDRVAQTAPLRRNITQEEVGNLGLFLL----SPLASGITGEVVYVDAGYHI 254 (256)
T ss_dssp -------------------------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred ccccchh-----------------hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh----CchhCCccCCeEEECcCEeC
Confidence 9765432 23667778888999999999999999999999 99999999999999999873
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=7.1e-48 Score=359.47 Aligned_cols=266 Identities=20% Similarity=0.221 Sum_probs=230.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
++|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++....+.++.++++|++++++++++++.
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 100 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence 5899999999999999999999999999999999999999999999999888888999999999999999887654
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
++++|++|||||......+.+.+.+++++.+.+|+.+.+.+.+.+.+.+..... .+.+++++|.++..
T Consensus 101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~i~~~ss~~~~~---------- 168 (294)
T d1w6ua_ 101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK--GAAFLSITTIYAET---------- 168 (294)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEECCTHHHH----------
T ss_pred ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccc--cccccccccchhhh----------
Confidence 689999999999998899999999999999999999999999998888776553 67889999988776
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|++||+|+.+|+|++|.|++++|||||+|+||+|+|++......
T Consensus 169 ------------~~~~~~-----------------~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~ 219 (294)
T d1w6ua_ 169 ------------GSGFVV-----------------PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD 219 (294)
T ss_dssp ------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC
T ss_pred ------------cccccc-----------------hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccC
Confidence 667777 999999999999999999999999999999999999998765432
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHhhh
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQW 348 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~~~~~~~ 348 (366)
+.++..+...+.+|.||+++|+|++..+.||+ |++++|+|||+|.||||++..++-.+.-
T Consensus 220 ----------------~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~----sd~s~~itG~~i~vDGG~~l~~~~~~~~ 279 (294)
T d1w6ua_ 220 ----------------PTGTFEKEMIGRIPCGRLGTVEELANLAAFLC----SDYASWINGAVIKFDGGEEVLISGEFND 279 (294)
T ss_dssp ----------------TTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTHHHHHHSTTGG
T ss_pred ----------------CcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHh----CchhcCCCCcEEEECCChhheeCCCCCc
Confidence 23455678888999999999999999999999 9999999999999999999888866653
Q ss_pred hhHHHHHHHHh
Q 017757 349 NWYGSIEKWHA 359 (366)
Q Consensus 349 ~~~~~~~~~~~ 359 (366)
.-...-+.|..
T Consensus 280 ~~~~~~~~~~~ 290 (294)
T d1w6ua_ 280 LRKVTKEQWDT 290 (294)
T ss_dssp GGGCCHHHHHH
T ss_pred hhhcchhhhhh
Confidence 22223344543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=1.7e-48 Score=359.96 Aligned_cols=256 Identities=19% Similarity=0.272 Sum_probs=219.8
Q ss_pred CCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc-hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 29 KPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 29 ~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
+|.+.+|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++... +.++.++++|++|+++++++++
T Consensus 10 ~~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~~~~~~v~~~~~ 88 (272)
T d1g0oa_ 10 GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANVGVVEDIVRMFE 88 (272)
T ss_dssp SGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh-CCceeeEeCCCCCHHHHHHHHH
Confidence 4567789999999999999999999999999999999998874 5667777777654 6789999999999999988876
Q ss_pred h----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 108 E----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 108 ~----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
+ ++++|++|||+|.....++.+.+.++|++++++|+.++++++|++.|+|++ .+++++++|..+..
T Consensus 89 ~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-----~g~~i~i~s~~~~~----- 158 (272)
T d1g0oa_ 89 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-----GGRLILMGSITGQA----- 158 (272)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-----TCEEEEECCGGGTC-----
T ss_pred HHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc-----cccccccccccccc-----
Confidence 5 589999999999999999999999999999999999999999999999987 46889998877643
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
.+.+... .|++||+|+.+|++++|.||+++|||||+|+||+|+|++.
T Consensus 159 ----------------~~~~~~~-----------------~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~ 205 (272)
T d1g0oa_ 159 ----------------KAVPKHA-----------------VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMY 205 (272)
T ss_dssp ----------------SSCSSCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHH
T ss_pred ----------------ccccchh-----------------hHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHH
Confidence 0344555 8999999999999999999999999999999999999998
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHH-HHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAK-KALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
+......... ......++..+ .....+|.||+++|+|++..+.||+ |++++|+|||+|.||||++
T Consensus 206 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~----s~~s~~itG~~i~vDGG~~ 271 (272)
T d1g0oa_ 206 HAVCREYIPN-------GENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA----SNDGGWVTGKVIGIDGGAC 271 (272)
T ss_dssp HHHGGGGSTT-------CTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTCC
T ss_pred HHHHHhhhhc-------ccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHh----CchhcCccCceEeECCCCC
Confidence 7754432211 01223444433 5677889999999999999999999 9999999999999999964
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-49 Score=359.11 Aligned_cols=241 Identities=21% Similarity=0.241 Sum_probs=210.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh----c
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE----A 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~----~ 109 (366)
++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.... +.++.++++|++|++++++++++ +
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 479999999999999999999999999999999999999999999887653 56899999999999999888765 6
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+++|++|||||...+ ++|++++++|+.+++++++.++|+|++++.+..|+||++||.++..
T Consensus 81 G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~----------- 141 (254)
T d2gdza1 81 GRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM----------- 141 (254)
T ss_dssp SCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------
T ss_pred CCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc-----------
Confidence 999999999998643 4588999999999999999999999988766679999999999987
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHH--HHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEA--LQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~--la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. +|++||+|+.+|+|+ |+.|++++|||||+|+||+|+|++++...
T Consensus 142 -----------~~~~~~-----------------~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~ 193 (254)
T d2gdza1 142 -----------PVAQQP-----------------VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIE 193 (254)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGG
T ss_pred -----------CCCCcc-----------------chHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcc
Confidence 788888 999999999999997 78899999999999999999999887643
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
..... ....+..+.+.+.+|.+|+++|+|++..++||+ |++ ++|||+|.||||+.
T Consensus 194 ~~~~~-----------~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~----s~~--~itG~~i~VdGG~~ 248 (254)
T d2gdza1 194 KEENM-----------GQYIEYKDHIKDMIKYYGILDPPLIANGLITLI----EDD--ALNGAIMKITTSKG 248 (254)
T ss_dssp CHHHH-----------GGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH----HCT--TCSSCEEEEETTTE
T ss_pred ccccc-----------cccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH----cCC--CCCCCEEEECCCCe
Confidence 22100 011234456778889999999999999999999 765 49999999999963
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-47 Score=345.80 Aligned_cols=243 Identities=22% Similarity=0.268 Sum_probs=211.0
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
|.+.+++||++|||||++|||+++|++|+++|++|++++|++++++++.++++... +.++.+++||+++++++++++++
T Consensus 3 ~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~ 82 (257)
T d1xg5a_ 3 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA 82 (257)
T ss_dssp TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence 44456999999999999999999999999999999999999999999999998864 45899999999999999888765
Q ss_pred ----cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccccc
Q 017757 109 ----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNT 184 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~ 184 (366)
++++|++|||||...+.++.+.+.++|++.+++|+.++++++++++|.|++++.. .|+||++||.++..
T Consensus 83 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~------ 155 (257)
T d1xg5a_ 83 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD-DGHIININSMSGHR------ 155 (257)
T ss_dssp HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-SCEEEEECCGGGTS------
T ss_pred HHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccC-CCceEEEechHhcC------
Confidence 6899999999999999999999999999999999999999999999999886532 58999999998865
Q ss_pred CccCccccccccccCCCC--CCccccccccccccccccccchhhhhHHHHHHHHHHHHhHh--ccCCcEEEEEcCCCCCC
Q 017757 185 NMKGINENKLCESSGKGH--GGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEV--IADDIHVSLIFPPDTET 260 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~--~~~gI~Vn~V~PG~v~T 260 (366)
.. +... .|++||+|+.+|+++|+.|+ +++|||||+|+||+++|
T Consensus 156 ----------------~~p~~~~~-----------------~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t 202 (257)
T d1xg5a_ 156 ----------------VLPLSVTH-----------------FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVET 202 (257)
T ss_dssp ----------------CCSCGGGH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCS
T ss_pred ----------------CCCCcccH-----------------HHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCC
Confidence 33 3344 79999999999999999998 78999999999999999
Q ss_pred CChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHH
Q 017757 261 PGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVA 335 (366)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~d 335 (366)
++.....+. . .+.....++.+|+++|+|+++.+.||+ |+.++|+|||++.-+
T Consensus 203 ~~~~~~~~~---------------~----~~~~~~~~~~~r~~~pedvA~~v~fL~----s~~a~~itG~i~i~~ 254 (257)
T d1xg5a_ 203 QFAFKLHDK---------------D----PEKAAATYEQMKCLKPEDVAEAVIYVL----STPAHIQIGDIQMRP 254 (257)
T ss_dssp SHHHHHTTT---------------C----HHHHHHHHC---CBCHHHHHHHHHHHH----HSCTTEEEEEEEEEE
T ss_pred hhhhhcChh---------------h----HHHHHhcCCCCCCcCHHHHHHHHHHHh----CChhcCeECCEEEEe
Confidence 987765321 1 234566779999999999999999999 999999999964433
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=7.6e-46 Score=335.75 Aligned_cols=219 Identities=21% Similarity=0.339 Sum_probs=196.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCe-------EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGAR-------VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~-------V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-- 108 (366)
+++|||||++|||+++|++|+++|++ |++++|+.++++++.++++.. +.++.++++|++|++++++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~-g~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITADISDMADVRRLTTHIV 80 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999998 999999999999999998765 67899999999999999887765
Q ss_pred --cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCc
Q 017757 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 109 --~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
++++|++|||||.....++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..
T Consensus 81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~---~G~Ii~isS~~~~~-------- 149 (240)
T d2bd0a1 81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH---SGHIFFITSVAATK-------- 149 (240)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEECCGGGTS--------
T ss_pred HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC---CCceEEEechhhcC--------
Confidence 69999999999999999999999999999999999999999999999999987 68999999999988
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.++.
T Consensus 150 --------------~~~~~~-----------------~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~ 198 (240)
T d2bd0a1 150 --------------AFRHSS-----------------IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV 198 (240)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC
T ss_pred --------------CCCCCh-----------------HHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc
Confidence 888888 9999999999999999999999999999999999999987653
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFV 331 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~ 331 (366)
.+. ..+++.+|+|++..++||+ ++.+++++|+.
T Consensus 199 ~~~----------------------------~~~~~~~PedvA~~v~~l~----s~~~~~~~~~~ 231 (240)
T d2bd0a1 199 DDE----------------------------MQALMMMPEDIAAPVVQAY----LQPSRTVVEEI 231 (240)
T ss_dssp CST----------------------------TGGGSBCHHHHHHHHHHHH----TSCTTEEEEEE
T ss_pred CHh----------------------------hHhcCCCHHHHHHHHHHHH----cCCccCccCCE
Confidence 211 0135667888889999999 87777777764
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-45 Score=345.48 Aligned_cols=230 Identities=24% Similarity=0.291 Sum_probs=197.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC---------chhHHHHHHHHHhhcCCeEEEEEecCCCHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS---------GKKLEEAKQSIQLATGIEVATYSADVRDFDAV 102 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~---------~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v 102 (366)
+|+|+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++... .....+|++|.+++
T Consensus 2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~~ 77 (302)
T d1gz6a_ 2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR----GGKAVANYDSVEAG 77 (302)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT----TCEEEEECCCGGGH
T ss_pred CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc----ccccccccchHHHH
Confidence 578999999999999999999999999999999999765 34456666666543 33456788887766
Q ss_pred HHHH----HhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 103 KTAL----DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 103 ~~~~----~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
++++ ++++++|+||||||+..+.++.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..
T Consensus 78 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~---~G~IV~isS~~~~~ 154 (302)
T d1gz6a_ 78 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN---YGRIIMTASASGIY 154 (302)
T ss_dssp HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CEEEEEECCHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC---CcEEEEeCChhhcC
Confidence 6555 4579999999999999999999999999999999999999999999999999987 79999999999987
Q ss_pred ccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||++
T Consensus 155 ----------------------~~~~~~-----------------~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~ 195 (302)
T d1gz6a_ 155 ----------------------GNFGQA-----------------NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 195 (302)
T ss_dssp ----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred ----------------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence 777888 99999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 259 ETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 259 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
.|++.... +++.. |.+.|+|++..++||+ |+.+ ++|||+|.+||||
T Consensus 196 ~t~~~~~~-------------------~~~~~----------~~~~PedvA~~v~fL~----S~~a-~itG~~i~vdGG~ 241 (302)
T d1gz6a_ 196 SRMTETVM-------------------PEDLV----------EALKPEYVAPLVLWLC----HESC-EENGGLFEVGAGW 241 (302)
T ss_dssp STTTGGGS-------------------CHHHH----------HHSCGGGTHHHHHHHT----STTC-CCCSCEEEEETTE
T ss_pred CcchhhcC-------------------cHhhH----------hcCCHHHHHHHHHHHc----CCCc-CCCCcEEEeCCCc
Confidence 88764321 23322 3356999999999999 8876 7899999999998
Q ss_pred HHH
Q 017757 339 IRF 341 (366)
Q Consensus 339 ~~~ 341 (366)
..-
T Consensus 242 ~~~ 244 (302)
T d1gz6a_ 242 IGK 244 (302)
T ss_dssp EEE
T ss_pred eeE
Confidence 653
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-43 Score=317.80 Aligned_cols=225 Identities=23% Similarity=0.345 Sum_probs=199.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
+.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.++.||++|++++++++++
T Consensus 2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~ 80 (244)
T d1yb1a_ 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDCSNREDIYSSAKKVKA 80 (244)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999764 67899999999999999888764
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|++|||||......+.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++..
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---~G~Iv~isS~~~~~--------- 148 (244)
T d1yb1a_ 81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN---HGHIVTVASAAGHV--------- 148 (244)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CEEEEEECCCC-CC---------
T ss_pred HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC---CceEEEeecchhcC---------
Confidence 78999999999999999999999999999999999999999999999999887 79999999999987
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc---CCcEEEEEcCCCCCCCChh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA---DDIHVSLIFPPDTETPGLE 264 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~---~gI~Vn~V~PG~v~T~~~~ 264 (366)
+.++.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|++.+
T Consensus 149 -------------~~~~~~-----------------~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~ 198 (244)
T d1yb1a_ 149 -------------SVPFLL-----------------AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK 198 (244)
T ss_dssp -------------CHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred -------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh
Confidence 777777 9999999999999999999987 5899999999999999876
Q ss_pred hhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCC--eEeeCCch
Q 017757 265 EENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGS--FIVPCNSE 309 (366)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr--~~~~~~v~ 309 (366)
+.... ....++||++++.+...+..++ ...|.+++
T Consensus 199 ~~~~~----------~~~~~~pe~va~~i~~~~~~~~~~i~~p~~~~ 235 (244)
T d1yb1a_ 199 NPSTS----------LGPTLEPEEVVNRLMHGILTEQKMIFIPSSIA 235 (244)
T ss_dssp CTHHH----------HCCCCCHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred CcCcc----------ccCCCCHHHHHHHHHHHHhcCCcEEEehHHHH
Confidence 53221 1235689999999999887764 33466654
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1e-43 Score=325.35 Aligned_cols=240 Identities=21% Similarity=0.187 Sum_probs=209.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHH---CCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAK---EGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~---~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
..|+||++|||||++|||+++|++|++ +|++|++++|+.++++++.+++.... +.++.+++||++++++++++++.
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 368999999999999999999999996 79999999999999999999998764 56899999999999999998764
Q ss_pred --------cCCCcEEEEcCCCCC---CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc
Q 017757 109 --------AGPVDVLVVNQGVFV---PGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (366)
Q Consensus 109 --------~~~id~vi~nAG~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~ 177 (366)
.+.+|++|||||... ...+.+.++++|++++++|+.++++++|+++|+|++++. ..++||++||.++.
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~-~~g~Iv~isS~~~~ 160 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG-LSKTVVNISSLCAL 160 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT-CEEEEEEECCGGGT
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCC-Cccccccccccccc
Confidence 246889999999754 356788999999999999999999999999999987642 25799999999998
Q ss_pred cccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 178 CWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
. +.++.. .|++||+|+.+|+++||.| ++|||||+|+||+
T Consensus 161 ~----------------------~~~~~~-----------------~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~ 199 (259)
T d1oaaa_ 161 Q----------------------PYKGWG-----------------LYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGP 199 (259)
T ss_dssp S----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCS
T ss_pred C----------------------CCccch-----------------HHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCC
Confidence 7 778888 9999999999999999998 6799999999999
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
|+|++.+...... ..++..+.+....+.||+++|+|++..++||+ ++ .+|+|||.|.
T Consensus 200 i~T~~~~~~~~~~--------------~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll----~~-~s~~TG~~id 256 (259)
T d1oaaa_ 200 LDNDMQQLARETS--------------KDPELRSKLQKLKSDGALVDCGTSAQKLLGLL----QK-DTFQSGAHVD 256 (259)
T ss_dssp BSSHHHHHHHHHC--------------SCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHH----HH-CCSCTTEEEE
T ss_pred CCCHHHHHhhhcC--------------CCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh----hh-ccCCCCCeEE
Confidence 9999887654322 22456667778889999999999999999999 65 4599998664
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=5.8e-45 Score=332.60 Aligned_cols=245 Identities=17% Similarity=0.205 Sum_probs=196.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCC-CHHHHHHHHHh---
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVR-DFDAVKTALDE--- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls-~~~~v~~~~~~--- 108 (366)
|+|+||++|||||++|||+++|++|+++|++|++++|+.++.+++.+......+.++.++.+|++ +.+++++++++
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999998887666554444444668999999998 66677776654
Q ss_pred -cCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCcc
Q 017757 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMK 187 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~ 187 (366)
++++|+||||||.. +.++|++++++|+.|+++++++++|+|.+++.+..|+||++||.++..
T Consensus 81 ~~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~--------- 143 (254)
T d1sbya1 81 QLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--------- 143 (254)
T ss_dssp HHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS---------
T ss_pred HcCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc---------
Confidence 69999999999964 567789999999999999999999999988766679999999999987
Q ss_pred CccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhh
Q 017757 188 GINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.+...
T Consensus 144 -------------~~~~~~-----------------~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~ 193 (254)
T d1sbya1 144 -------------AIHQVP-----------------VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFN 193 (254)
T ss_dssp -------------CCTTSH-----------------HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCC
T ss_pred -------------CCCCCH-----------------HHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccc
Confidence 788888 99999999999999999999999999999999999999876532
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFVALCFQ 347 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~~~~~~ 347 (366)
... +..+.+......++..++++++..++++. + ...||+++.+|||+...+.+-.+
T Consensus 194 ~~~-----------------~~~~~~~~~~~~~~~~~~e~va~~~~~~~----~---~~~tG~vi~vdgG~l~~~~~~~~ 249 (254)
T d1sbya1 194 SWL-----------------DVEPRVAELLLSHPTQTSEQCGQNFVKAI----E---ANKNGAIWKLDLGTLEAIEWTKH 249 (254)
T ss_dssp CGG-----------------GSCTTHHHHHTTSCCEEHHHHHHHHHHHH----H---HCCTTCEEEEETTEEEECCCCCS
T ss_pred cch-----------------hHHHHHHhccccCCCCCHHHHHHHHHHhh----h---CCCCCCEEEECCCEeCccCCccc
Confidence 211 01111122223345667788887776665 2 23499999999997544443333
Q ss_pred h
Q 017757 348 W 348 (366)
Q Consensus 348 ~ 348 (366)
|
T Consensus 250 w 250 (254)
T d1sbya1 250 W 250 (254)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-42 Score=314.88 Aligned_cols=233 Identities=26% Similarity=0.302 Sum_probs=197.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---- 108 (366)
.+||||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.+.....+|+.+.+.+++..++
T Consensus 1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (248)
T d2o23a1 1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTSEKDVQTALALAKGK 76 (248)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCCcccccccccccccccccccccccc
Confidence 3799999999999999999999999999999999999999998888776 45778899999999888777654
Q ss_pred cCCCcEEEEcCCCCCC------CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEEecCCccccc
Q 017757 109 AGPVDVLVVNQGVFVP------GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN---GGPASIALMSSQAGQCW 179 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~---~~~g~iv~vsS~~~~~~ 179 (366)
...+|.+++|++.... .++.+.+.++|++++++|+.++++++|++.|+|..+.. ...|+||++||.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~- 155 (248)
T d2o23a1 77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE- 155 (248)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-
T ss_pred cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc-
Confidence 4789999999876543 34567789999999999999999999999999986532 2468999999999987
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.++.. +|++||+|+.+|++++|.|++++|||||+|+||+++
T Consensus 156 ---------------------~~~~~~-----------------~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~ 197 (248)
T d2o23a1 156 ---------------------GQVGQA-----------------AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFG 197 (248)
T ss_dssp ---------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred ---------------------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCcee
Confidence 788888 999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhC-CCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 260 TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKS-GSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 260 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~-gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
|++.... +++..+.+.+.+|. ||+++|+|++..++||+ + ++|+|||+|.
T Consensus 198 T~~~~~~-------------------~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~----s--~~~itGq~I~ 247 (248)
T d2o23a1 198 TPLLTSL-------------------PEKVCNFLASQVPFPSRLGDPAEYAHLVQAII----E--NPFLNGEVIR 247 (248)
T ss_dssp CC-----------------------------CHHHHTCSSSCSCBCHHHHHHHHHHHH----H--CTTCCSCEEE
T ss_pred cchhhcC-------------------CHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHH----h--CCCCCceEeE
Confidence 9987653 34555667778886 99999999999999999 5 5799999764
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=2.2e-42 Score=319.91 Aligned_cols=239 Identities=18% Similarity=0.170 Sum_probs=197.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC-chhHHHHHHHHHhhcCCeEEEEE-----------------ecCCCH
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARS-GKKLEEAKQSIQLATGIEVATYS-----------------ADVRDF 99 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~-----------------~Dls~~ 99 (366)
.++|||||++|||+++|++|+++|++|++++++ .+.++++.+++....+.....++ +|++++
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 479999999999999999999999999998764 56677788888877666665554 558999
Q ss_pred HHHHHHHHh----cCCCcEEEEcCCCCCCCCccCCCHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHhcc
Q 017757 100 DAVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVR--------------LMIDVNITGSFHMIKAALPLIKKRQ 161 (366)
Q Consensus 100 ~~v~~~~~~----~~~id~vi~nAG~~~~~~~~~~~~~~~~--------------~~~~vN~~~~~~l~~~~~~~l~~~~ 161 (366)
+++++++++ ++++|++|||||...+.++.+.+.++|+ .++++|+.+++++.|.+.+.+....
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 998888765 6999999999999888887777666554 4789999999999999999875422
Q ss_pred ---CCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHH
Q 017757 162 ---NGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEA 238 (366)
Q Consensus 162 ---~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~ 238 (366)
.+..++|++++|..... +.++.. +|++||+|+.+|+++
T Consensus 163 ~~~~~~~~~ii~~~s~~~~~----------------------~~~~~~-----------------~Y~asKaal~~lt~~ 203 (284)
T d1e7wa_ 163 AKHRGTNYSIINMVDAMTNQ----------------------PLLGYT-----------------IYTMAKGALEGLTRS 203 (284)
T ss_dssp GGGSCSCEEEEEECCTTTTS----------------------CCTTCH-----------------HHHHHHHHHHHHHHH
T ss_pred HHhcCCCCcccccccccccC----------------------Ccccee-----------------eeccccccchhhhHH
Confidence 23467999999988876 777777 999999999999999
Q ss_pred HHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhC-CCeEeeCCchhHHHHHHh
Q 017757 239 LQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKS-GSFIVPCNSEGFLLSIAT 317 (366)
Q Consensus 239 la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~-gr~~~~~~v~~~~~~L~~ 317 (366)
+|.|++++|||||+|+||++.+. .. .+++..+.....+|. ||+++|+|+++.+.||+
T Consensus 204 lA~el~~~gIrvN~I~PG~t~~~--~~-------------------~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~- 261 (284)
T d1e7wa_ 204 AALELAPLQIRVNGVGPGLSVLV--DD-------------------MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLC- 261 (284)
T ss_dssp HHHHHGGGTEEEEEEEESSBCCG--GG-------------------SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHH-
T ss_pred HHHHhCCcccccccccccccccc--cc-------------------CCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh-
Confidence 99999999999999999986543 11 235666777888885 99999999999999999
Q ss_pred cCCCCchhHHHHHHHHHHHHHHH
Q 017757 318 AGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 318 ~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
|++++|+|||+|.||||++.
T Consensus 262 ---S~~s~~itG~~i~VDGG~sl 281 (284)
T d1e7wa_ 262 ---SSKAKYITGTCVKVDGGYSL 281 (284)
T ss_dssp ---SGGGTTCCSCEEEESTTGGG
T ss_pred ---CchhcCccCCeEEECcChhc
Confidence 99999999999999999874
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.8e-42 Score=316.47 Aligned_cols=240 Identities=13% Similarity=0.103 Sum_probs=207.3
Q ss_pred CCCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.|+||++|||||++ |||+++|+.|+++|++|++++|+++..+.+ +++... .........|+++.+++.+.+++
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ-LGSDIVLQCDVAEDASIDTMFAELGK 79 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh-cCCcceeecccchHHHHHHHHHHhhh
Confidence 48999999999998 899999999999999999999996655544 444433 34567788999999988877765
Q ss_pred -cCCCcEEEEcCCCCCCCCc-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccccc
Q 017757 109 -AGPVDVLVVNQGVFVPGEL-----EVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIK 182 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~ 182 (366)
++++|++||||+......+ ++...+.+...+++|+.+.+.+++.+.+.+++ .++|+++||..+..
T Consensus 80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~Ii~iss~~~~~---- 150 (258)
T d1qsga_ 80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-----GSALLTLSYLGAER---- 150 (258)
T ss_dssp TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEEECGGGTS----
T ss_pred cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CcEEEEecchhhcc----
Confidence 5899999999998654432 35677889999999999999999999998865 46899999988876
Q ss_pred ccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 183 NTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.|... .|++||+|+.+|++++|.|++++|||||+|+||+|+|++
T Consensus 151 ------------------~~~~~~-----------------~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~ 195 (258)
T d1qsga_ 151 ------------------AIPNYN-----------------VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 195 (258)
T ss_dssp ------------------BCTTTT-----------------HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred ------------------CCCCcH-----------------HHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccc
Confidence 777777 999999999999999999999999999999999999998
Q ss_pred hhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 263 LEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
.... ...++..+.+.+.+|.||+++|+|+++.+.||+ |++++|+|||++.+|||++.
T Consensus 196 ~~~~-----------------~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~----s~~s~~itG~~i~vDGG~~i 252 (258)
T d1qsga_ 196 ASGI-----------------KDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC----SDLSAGISGEVVHVDGGFSI 252 (258)
T ss_dssp GGGS-----------------TTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHT----SGGGTTCCSCEEEESTTGGG
T ss_pred cccc-----------------chhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHh----CchhcCccCceEEECcCHHH
Confidence 7653 245667778888999999999999999999999 99999999999999999873
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-39 Score=300.22 Aligned_cols=240 Identities=22% Similarity=0.256 Sum_probs=209.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~ 110 (366)
|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++....+..+..+.+|+++.++++.+.+. ++
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999999999999999999999999998888888999999999999998877655 58
Q ss_pred CCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcc
Q 017757 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGIN 190 (366)
Q Consensus 111 ~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~ 190 (366)
.+|+++||||......+.+.+.+++++++++|+.|++.+++.++|+|+++ .|+||++||.++..
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~----~G~ii~isS~~~~~------------ 155 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS----NGSIVVVSSLAGKV------------ 155 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCEEEEEEEGGGTS------------
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc----CCcceEeccchhcC------------
Confidence 99999999999988899999999999999999999999999999999864 48999999999988
Q ss_pred ccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc--CCcEEEEEcCCCCCCCChhhhhh
Q 017757 191 ENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA--DDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~--~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.|+.. .|++||+|+.+|+++|+.|+++ .||+||+|+||+|+|++..+...
T Consensus 156 ----------~~p~~~-----------------~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~ 208 (269)
T d1xu9a_ 156 ----------AYPMVA-----------------AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS 208 (269)
T ss_dssp ----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC
T ss_pred ----------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhcc
Confidence 888888 9999999999999999999975 57999999999999998765432
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHH
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMA 329 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG 329 (366)
.... ....+||++++.++..+..++.....+....+.+|+ +..+..+..
T Consensus 209 ~~~~--------~~~~~~e~~a~~i~~~~~~~~~~i~~~~~~~~~~l~----~~~~~~i~~ 257 (269)
T d1xu9a_ 209 GIVH--------MQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI----RNPSRKILE 257 (269)
T ss_dssp GGGG--------GGCBCHHHHHHHHHHHHHTTCSEEEECSCHHHHHHS----CCHHHHHHH
T ss_pred CCcc--------ccCCCHHHHHHHHHHHhhcCCCEEEccHHHHHHHHH----HHhHHHHHH
Confidence 2111 124689999999999999888766556566666666 555555443
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.9e-42 Score=324.20 Aligned_cols=257 Identities=14% Similarity=0.058 Sum_probs=198.2
Q ss_pred CCCEEEEEc--CCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC-----------CeEEEEEe--------
Q 017757 36 KDRHVFITG--GSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG-----------IEVATYSA-------- 94 (366)
Q Consensus 36 ~gk~vLITG--as~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-----------~~v~~~~~-------- 94 (366)
.+|++|||| +++|||+++|++|+++|++|++++++................ .......+
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 479999999 558999999999999999999999987655544333222111 11233333
Q ss_pred ------------cCCCHHHHHHHH----HhcCCCcEEEEcCCCCCC--CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017757 95 ------------DVRDFDAVKTAL----DEAGPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNITGSFHMIKAALPL 156 (366)
Q Consensus 95 ------------Dls~~~~v~~~~----~~~~~id~vi~nAG~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 156 (366)
|+++.+++++++ ++++++|++|||||...+ +++.+.+.++|++++++|+.+.+.++|+++|+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~ 160 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence 555655555554 457999999999997654 57889999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHH
Q 017757 157 IKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLA 236 (366)
Q Consensus 157 l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~ 236 (366)
|++ .|+||++||..+.. +.|++.. .|++||+|+++|+
T Consensus 161 m~~-----~GsIv~iss~~~~~----------------------~~p~y~~----------------~y~asKaal~~lt 197 (329)
T d1uh5a_ 161 MKP-----QSSIISLTYHASQK----------------------VVPGYGG----------------GMSSAKAALESDT 197 (329)
T ss_dssp EEE-----EEEEEEEECGGGTS----------------------CCTTCTT----------------THHHHHHHHHHHH
T ss_pred ccc-----ccccccceeehhcc----------------------cccccch----------------hhhhhhccccccc
Confidence 965 57999999988876 6666431 6899999999999
Q ss_pred HHHHhHhcc-CCcEEEEEcCCCCCCCChhhhhhcCC--------------------------cchhhhhccCCCCCHHHH
Q 017757 237 EALQQEVIA-DDIHVSLIFPPDTETPGLEEENKRRP--------------------------RLTSIIAASSGAMKADEV 289 (366)
Q Consensus 237 ~~la~e~~~-~gI~Vn~V~PG~v~T~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~ 289 (366)
|+||.||++ +|||||+|+||+|+|+..+....... ...............++.
T Consensus 198 r~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (329)
T d1uh5a_ 198 RVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYA 277 (329)
T ss_dssp HHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC------------------------------------------CHHHHH
T ss_pred hhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHH
Confidence 999999997 69999999999999965433111000 000000111123457888
Q ss_pred HHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 017757 290 AKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLI 339 (366)
Q Consensus 290 a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~ 339 (366)
.+.+.+.+|.||+++|+|+++.++||+ |+.++|+|||+|.||||++
T Consensus 278 ~~~~~~~~Pl~R~~~pedvA~~v~fLa----Sd~s~~iTGq~i~VDGG~~ 323 (329)
T d1uh5a_ 278 IEYSEKYAPLRQKLLSTDIGSVASFLL----SRESRAITGQTIYVDNGLN 323 (329)
T ss_dssp HHHHHHHSSSCSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGG
T ss_pred HHHHhccCCCCCCcCHHHHHHHHHHHh----CchhCCccCCeEEECCCcc
Confidence 889999999999999999999999999 9999999999999999985
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-39 Score=302.28 Aligned_cols=250 Identities=27% Similarity=0.287 Sum_probs=191.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEE---ecCchhHHHHHHHHHh--hcCCeEEEEEecCCCHHHHHHHHHhc--
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSIL---ARSGKKLEEAKQSIQL--ATGIEVATYSADVRDFDAVKTALDEA-- 109 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~---~r~~~~~~~~~~~l~~--~~~~~v~~~~~Dls~~~~v~~~~~~~-- 109 (366)
.|++|||||++|||+++|++|+++|++|+.+ .|+.+..+++.+.... ..+.++.++.+|++|++++++++++.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 5789999999999999999999999985544 5554444444333322 22568999999999999999999884
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
+.+|++|||||......+.+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~---~G~Iv~isS~~g~~----------- 147 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG---SGRVLVTGSVGGLM----------- 147 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---CEEEEEEEEGGGTS-----------
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC---CCceEEEechhhcC-----------
Confidence 7899999999999999999999999999999999999999999999999887 69999999999988
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhc
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKR 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~ 269 (366)
+.|+.. .|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.++....
T Consensus 148 -----------~~~~~~-----------------~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~ 199 (285)
T d1jtva_ 148 -----------GLPFND-----------------VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGS 199 (285)
T ss_dssp -----------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CC
T ss_pred -----------CCCCch-----------------HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccC
Confidence 888888 9999999999999999999999999999999999999998764322
Q ss_pred CCcchhhhhccCCCCCHHHHHHHH--HhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHH
Q 017757 270 RPRLTSIIAASSGAMKADEVAKKA--LDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEV 333 (366)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~--~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~ 333 (366)
........ .....++..+.+ ...++.++.++|+|+++.+++++.. .+|..+|++|+.+.
T Consensus 200 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~-~~p~~ry~~g~~~~ 260 (285)
T d1jtva_ 200 PEEVLDRT----DIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRA-PKPTLRYFTTERFL 260 (285)
T ss_dssp HHHHHHTS----CHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHC-SSCCSEEESCSTTH
T ss_pred HHHHhhcc----chhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhC-CCCCeEEecHHHHH
Confidence 10000000 000112222211 2334566788888888888888732 24556788876543
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=7.8e-41 Score=311.54 Aligned_cols=247 Identities=17% Similarity=0.104 Sum_probs=195.5
Q ss_pred CCcCCCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc--------C--Ce-EEEEEec--
Q 017757 31 VRIPIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT--------G--IE-VATYSAD-- 95 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~--------~--~~-v~~~~~D-- 95 (366)
++++|+||++|||||++ |||+++|++|+++|++|++++|++.............. + .+ -....+|
T Consensus 2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 57899999999999875 99999999999999999999998654433332221110 0 01 1222333
Q ss_pred C------------------CCHH----HHHHHHHhcCCCcEEEEcCCCCC--CCCccCCCHHHHHHHHHHHHHHHHHHHH
Q 017757 96 V------------------RDFD----AVKTALDEAGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNITGSFHMIK 151 (366)
Q Consensus 96 l------------------s~~~----~v~~~~~~~~~id~vi~nAG~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 151 (366)
+ ++.+ -++++.++++++|++|||||... ..++.+.+.++|++++++|+.+++.+++
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 161 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence 1 2222 23444556899999999999854 4678899999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHH
Q 017757 152 AALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFG 231 (366)
Q Consensus 152 ~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa 231 (366)
+++|.+.++ ++++.+++...... ..+... .|+++|++
T Consensus 162 ~~~~~~~~~-----g~~~~~~~~~~~~~---------------------~~~~~~-----------------~y~~aKaa 198 (297)
T d1d7oa_ 162 HFLPIMNPG-----GASISLTYIASERI---------------------IPGYGG-----------------GMSSAKAA 198 (297)
T ss_dssp HHGGGEEEE-----EEEEEEECGGGTSC---------------------CTTCTT-----------------THHHHHHH
T ss_pred HHHHHhhcC-----Ccceeeeehhhccc---------------------cccccc-----------------ceeccccc
Confidence 999888774 56666666655430 334445 89999999
Q ss_pred HHHHHHHHHhHhc-cCCcEEEEEcCCCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchh
Q 017757 232 LRGLAEALQQEVI-ADDIHVSLIFPPDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEG 310 (366)
Q Consensus 232 l~~l~~~la~e~~-~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~ 310 (366)
+.++++.++.|++ ++|||||+|+||+++|++.+.. ...++..+...+.+|.||+++|+|++.
T Consensus 199 ~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-----------------~~~~~~~~~~~~~~PlgR~~~peevA~ 261 (297)
T d1d7oa_ 199 LESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-----------------GFIDTMIEYSYNNAPIQKTLTADEVGN 261 (297)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-----------------SHHHHHHHHHHHHSSSCCCBCHHHHHH
T ss_pred ccccccccchhccccceEEecccccccccchhhhhc-----------------cCCHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999999997 6899999999999999986542 134677788889999999999999999
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 017757 311 FLLSIATAGLSPQRSVLMAFVEVVAAGLIRF 341 (366)
Q Consensus 311 ~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~ 341 (366)
.++||+ |++++|+|||+|.+|||++..
T Consensus 262 ~v~fL~----S~~a~~itGq~i~vDGG~s~~ 288 (297)
T d1d7oa_ 262 AAAFLV----SPLASAITGATIYVDNGLNSM 288 (297)
T ss_dssp HHHHHT----SGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHh----CchhcCCcCceEEECcCHhhc
Confidence 999999 999999999999999999753
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.4e-40 Score=300.36 Aligned_cols=227 Identities=23% Similarity=0.290 Sum_probs=190.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---cCCCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---AGPVD 113 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~---~~~id 113 (366)
+|++|||||++|||+++|++|+++|++|++++|+++. .+....++|+++...+..+.+. ....+
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 67 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------------EDLIYVEGDVTREEDVRRAVARAQEEAPLF 67 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------------ccceEeeccccchhhhHHHHHhhhcccccc
Confidence 5999999999999999999999999999999998753 3567789999999988877655 24567
Q ss_pred EEEEcCCCCCC----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCCcEEEEecCCccccccccccCc
Q 017757 114 VLVVNQGVFVP----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQ---NGGPASIALMSSQAGQCWTIKNTNM 186 (366)
Q Consensus 114 ~vi~nAG~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~---~~~~g~iv~vsS~~~~~~~~~~~~~ 186 (366)
.++++++.... ......+.+.+++++++|+.+++.+++.+.+.+.+.. .++.|+||++||.++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-------- 139 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-------- 139 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH--------
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc--------
Confidence 77777765433 3445678899999999999999999999999976532 13468999999999987
Q ss_pred cCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhh
Q 017757 187 KGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. .|++||+|+.+|++++|.|++++|||||+|+||+|+|++....
T Consensus 140 --------------~~~~~~-----------------~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~ 188 (241)
T d1uaya_ 140 --------------GQIGQA-----------------AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL 188 (241)
T ss_dssp --------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS
T ss_pred --------------CCCCch-----------------hhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh
Confidence 788888 9999999999999999999999999999999999999987653
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhC-CCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKS-GSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~-gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
. ++..+.+...++. +|+++|+|++..+.||+ | ++|+|||+|.||||+++
T Consensus 189 ~-------------------~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~----s--~~~iTG~~i~VDGG~~m 238 (241)
T d1uaya_ 189 P-------------------EKAKASLAAQVPFPPRLGRPEEYAALVLHIL----E--NPMLNGEVVRLDGALRM 238 (241)
T ss_dssp C-------------------HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHH----H--CTTCCSCEEEESTTCCC
T ss_pred h-------------------hhHHHHHHhcCCCCCCCcCHHHHHHHHHHHH----h--CCCCCCCEEEECCcccC
Confidence 2 2333445555655 99999999999999999 6 46999999999999863
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=5.2e-40 Score=302.69 Aligned_cols=240 Identities=16% Similarity=0.114 Sum_probs=189.0
Q ss_pred CCCCCEEEEEcCCC--hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGas~--gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.|+||++|||||+| |||+++|++|+++|++|++++|+++ +++..+++.+. +....++.+|+++++++++++++
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVKK 79 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh-CCceeEeeecccchhhHHHHHHHHHH
Confidence 48999999999765 9999999999999999999999954 44555666555 45667789999999998877755
Q ss_pred -cCCCcEEEEcCCCCCCCC----ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccc
Q 017757 109 -AGPVDVLVVNQGVFVPGE----LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKN 183 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~ 183 (366)
++++|++|||+|...... ..+...+.+...+.++..+.+...+...+.++. .+.|+++||.+...
T Consensus 80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~s~~~~~~----- 149 (274)
T d2pd4a1 80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-----GASVLTLSYLGSTK----- 149 (274)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEEECGGGTS-----
T ss_pred HcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc-----Ccceeeeccccccc-----
Confidence 689999999999865532 333445555555555555444444444332211 34566666655544
Q ss_pred cCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCCh
Q 017757 184 TNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGL 263 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~ 263 (366)
+.+... .|+++|+|+.+++++++.|++++|||||+|+||+++|++.
T Consensus 150 -----------------~~~~~~-----------------~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~ 195 (274)
T d2pd4a1 150 -----------------YMAHYN-----------------VMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLAS 195 (274)
T ss_dssp -----------------BCTTCH-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred -----------------ccccch-----------------hhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccc
Confidence 555556 8999999999999999999999999999999999999987
Q ss_pred hhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 017757 264 EEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIR 340 (366)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~ 340 (366)
... .+.++..+......+.+|+++|+|++..+.||+ |+.++|+|||+|.||||++.
T Consensus 196 ~~~-----------------~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~----S~~s~~itG~~i~vDGG~~~ 251 (274)
T d2pd4a1 196 SGI-----------------ADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL----SSLSSGVSGEVHFVDAGYHV 251 (274)
T ss_dssp GGS-----------------TTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHH----SGGGTTCCSCEEEESTTGGG
T ss_pred ccc-----------------CchHHHHHHHhhhhhccCCcCHHHHHHHHHHHh----ChhhCCCcCceEEECCChhh
Confidence 653 244677778888899999999999999999999 99999999999999999973
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=1.4e-39 Score=297.94 Aligned_cols=239 Identities=19% Similarity=0.219 Sum_probs=197.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-HHHHHHHHHhhcCCeEEEEEecCCC----HHHHHHHH----Hh
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-LEEAKQSIQLATGIEVATYSADVRD----FDAVKTAL----DE 108 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~Dls~----~~~v~~~~----~~ 108 (366)
.++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++....+.+....++|+.+ .+.+++++ ++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999998654 5677888888878888888877765 45555544 45
Q ss_pred cCCCcEEEEcCCCCCCCCccC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCcEEEEecCCc
Q 017757 109 AGPVDVLVVNQGVFVPGELEV-----------QSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN--GGPASIALMSSQA 175 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~-----------~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~--~~~g~iv~vsS~~ 175 (366)
++++|++|||||+..+..+.+ ...+.+...+..|+.+.+...+...+.+..... ...+.+++++|..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 799999999999877654332 345567888999999999999988887665432 2356888888887
Q ss_pred cccccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcC
Q 017757 176 GQCWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255 (366)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~P 255 (366)
+.. +.|+.. .|++||+|+++|++++|.|++++|||||+|+|
T Consensus 162 ~~~----------------------~~~~~~-----------------~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~P 202 (266)
T d1mxha_ 162 TDL----------------------PLPGFC-----------------VYTMAKHALGGLTRAAALELAPRHIRVNAVAP 202 (266)
T ss_dssp GGS----------------------CCTTCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred ccc----------------------cCcchh-----------------hhhhhHHHHhhhHHHHHHHhCccCcEEEEecc
Confidence 766 777777 99999999999999999999999999999999
Q ss_pred CCCCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCe-EeeCCchhHHHHHHhcCCCCchhHHHHHHHHH
Q 017757 256 PDTETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSF-IVPCNSEGFLLSIATAGLSPQRSVLMAFVEVV 334 (366)
Q Consensus 256 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~-~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~ 334 (366)
|+++|++.. +++..+.+.+.+|.+|. ++|+|++.+++||+ |++++|+|||+|.|
T Consensus 203 G~i~t~~~~---------------------~~~~~~~~~~~~pl~r~~~~peeva~~v~fL~----s~~s~~itG~~i~v 257 (266)
T d1mxha_ 203 GLSLLPPAM---------------------PQETQEEYRRKVPLGQSEASAAQIADAIAFLV----SKDAGYITGTTLKV 257 (266)
T ss_dssp SSBSCCSSS---------------------CHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHH----SGGGTTCCSCEEEE
T ss_pred CcEeccccC---------------------CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh----CchhCCccCCeEEE
Confidence 999998532 35666778888999875 89999999999999 99999999999999
Q ss_pred HHHHHH
Q 017757 335 AAGLIR 340 (366)
Q Consensus 335 dgG~~~ 340 (366)
|||++.
T Consensus 258 DGG~~l 263 (266)
T d1mxha_ 258 DGGLIL 263 (266)
T ss_dssp STTGGG
T ss_pred CccHhh
Confidence 999874
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=8.6e-40 Score=300.03 Aligned_cols=247 Identities=12% Similarity=0.084 Sum_probs=200.4
Q ss_pred CCCCCEEEEEcC--CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---
Q 017757 34 PIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (366)
Q Consensus 34 ~l~gk~vLITGa--s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--- 108 (366)
.|+||++||||| ++|||+++|++|+++|++|++++|+.+++.+ ++.+..+.+...+++|++++++++++++.
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~ 79 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRLPAKAPLLELDVQNEEHLASLAGRVTE 79 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHcCCceeeEeeecccccccccccchhhh
Confidence 489999999994 5799999999999999999999999876533 33344467788899999999988777654
Q ss_pred ----cCCCcEEEEcCCCCCC-----CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccc
Q 017757 109 ----AGPVDVLVVNQGVFVP-----GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179 (366)
Q Consensus 109 ----~~~id~vi~nAG~~~~-----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~ 179 (366)
++.+|+++||||+... .++.+.+.+++.+.+++|+.+.+...+...+.+.+ +.+++++|.....
T Consensus 80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~s~~~~~- 152 (268)
T d2h7ma1 80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP------GGSIVGMDFDPSR- 152 (268)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE------EEEEEEEECCCSS-
T ss_pred ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc------ccccccccccccc-
Confidence 3689999999997532 35677899999999999999999999888765433 3455555555554
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
+.|+.. .|+++|+|+.+|++++|.|++++|||||+|+||+++
T Consensus 153 ---------------------~~p~~~-----------------~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~ 194 (268)
T d2h7ma1 153 ---------------------AMPAYN-----------------WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIR 194 (268)
T ss_dssp ---------------------CCTTTH-----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred ---------------------cCcccc-----------------hhhccccchhhccccchhhhhccCCcceEEecCCCC
Confidence 666777 999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCC-eEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 017757 260 TPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGS-FIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGL 338 (366)
Q Consensus 260 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr-~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~ 338 (366)
|++.............. ...+.+.+.+....|.+| ++.|+|+++.+.||+ ||.++|+|||+|+||||+
T Consensus 195 T~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~----Sd~a~~iTG~~i~vDGG~ 263 (268)
T d2h7ma1 195 TLAMSAIVGGALGEEAG-------AQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALL----SDWLPATTGDIIYADGGA 263 (268)
T ss_dssp CHHHHHHHTTTTCHHHH-------HHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHH----SSSCTTCCSEEEEESTTG
T ss_pred Chhhhhhccchhhhhhc-------cchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh----CchhcCccCCEEEECcCc
Confidence 99887654332111100 123556667777788876 999999999999999 999999999999999998
Q ss_pred H
Q 017757 339 I 339 (366)
Q Consensus 339 ~ 339 (366)
+
T Consensus 264 ~ 264 (268)
T d2h7ma1 264 H 264 (268)
T ss_dssp G
T ss_pred c
Confidence 5
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=8.8e-37 Score=277.60 Aligned_cols=213 Identities=21% Similarity=0.269 Sum_probs=164.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc---
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--- 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--- 109 (366)
|+.|+||||||++|||+++|++|+++|+ +|++++|+.++++++. +..+.++.++++|++|++++++++++.
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 76 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIKDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TCCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----HhhCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence 4679999999999999999999999996 6899999998877654 334668999999999999999888763
Q ss_pred -C--CCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------CCcEEEEecCCccc
Q 017757 110 -G--PVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNG--------GPASIALMSSQAGQ 177 (366)
Q Consensus 110 -~--~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~--------~~g~iv~vsS~~~~ 177 (366)
+ ++|++|||||+..+ ..+.+.+.++|++++++|+.|++++++.++|+|+++..+ ..+++++++|..+.
T Consensus 77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~ 156 (250)
T d1yo6a1 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence 3 59999999998654 677889999999999999999999999999999876421 24688888887654
Q ss_pred cccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCC
Q 017757 178 CWTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPD 257 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~ 257 (366)
. ..+... .+..+..+|++||+|+.+|+++++.|++++||+||+|+||+
T Consensus 157 ~----------------------~~~~~~----------~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~ 204 (250)
T d1yo6a1 157 I----------------------TDNTSG----------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGW 204 (250)
T ss_dssp S----------------------TTCCST----------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCC
T ss_pred c----------------------cCCccc----------ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCC
Confidence 3 110000 01112237999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhhhh
Q 017757 258 TETPGLEEENKRRPRLTSIIAASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 258 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~ 298 (366)
|+|+|..+. ..++||+.++.++..+.
T Consensus 205 v~T~m~~~~---------------~~~~~e~~a~~~~~~~~ 230 (250)
T d1yo6a1 205 VQTNLGGKN---------------AALTVEQSTAELISSFN 230 (250)
T ss_dssp C----------------------------HHHHHHHHHHHT
T ss_pred CCCCCCCCC---------------CCCCHHHHHHHHHHHHh
Confidence 999986542 13578998888887773
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-37 Score=287.43 Aligned_cols=233 Identities=21% Similarity=0.200 Sum_probs=174.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh----cCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----~~~i 112 (366)
+++|||||++|||+++|++|+++ |++|++++|+.++++++.++++.. +.++.+++||++|.+++++++++ ++++
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i 82 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 82 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 45699999999999999999986 899999999999999999999876 56789999999999999888765 5899
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC-------
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN------- 185 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~------- 185 (366)
|+||||||+..+....+.+.++|++++++|+.|++++++.++|+|++ .|+||++||..+.........
T Consensus 83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-----~g~ivnisS~~~~~~~~~~~~y~~~k~~ 157 (275)
T d1wmaa1 83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-----QGRVVNVSSIMSVRALKSCSPELQQKFR 157 (275)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----EEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCcccccccceeccccccchhhhhhhc
Confidence 99999999998888888899999999999999999999999999976 479999999887642110000
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhcc----CCcEEEEEcCCCCCCC
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIA----DDIHVSLIFPPDTETP 261 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~----~gI~Vn~V~PG~v~T~ 261 (366)
........... .......+..+.....+..+...|++||+|+.+|++.++.|+++ .||+||+|+||+|+|+
T Consensus 158 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~ 232 (275)
T d1wmaa1 158 SETITEEELVG-----LMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 232 (275)
T ss_dssp CSSCCHHHHHH-----HHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred ccccchhhhcc-----ccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence 00000000000 00000000000000011123347999999999999999999976 5999999999999999
Q ss_pred ChhhhhhcCCcchhhhhccCCCCCHHHHHHHHHhh
Q 017757 262 GLEEENKRRPRLTSIIAASSGAMKADEVAKKALDG 296 (366)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 296 (366)
|..... ..+||+.++.++..
T Consensus 233 m~~~~~---------------~~~pee~A~~~~~~ 252 (275)
T d1wmaa1 233 MAGPKA---------------TKSPEEGAETPVYL 252 (275)
T ss_dssp TTCTTC---------------SBCHHHHTHHHHHH
T ss_pred cccCcc---------------cCCHHHHHHHHHHH
Confidence 876421 24677777655543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=2.6e-36 Score=274.17 Aligned_cols=191 Identities=23% Similarity=0.301 Sum_probs=163.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHH---HCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-----
Q 017757 37 DRHVFITGGSSGIGLALAHQAA---KEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----- 108 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~---~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~----- 108 (366)
.|++|||||++|||+++|++|+ ++|++|++++|++++++++.+... . +.++.+++||++|++++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK-N-HSNIHILEIDLRNFDAYDKLVADIEGVT 79 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH-H-CTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh-c-CCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence 4899999999999999999996 579999999999999887654333 3 56899999999999999988774
Q ss_pred -cCCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CCCcEEEEecCCcccc
Q 017757 109 -AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN--------GGPASIALMSSQAGQC 178 (366)
Q Consensus 109 -~~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~--------~~~g~iv~vsS~~~~~ 178 (366)
++++|++|||||+..+ ..+.+.+.++|++++++|+.|+++++++++|+|+++.. ...+++|+++|.++..
T Consensus 80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 4789999999998665 46778999999999999999999999999999987531 2368999999988764
Q ss_pred ccccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 179 WTIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
. .++.++.. +|++||+|+.+|++++|.|++++||+||+|+||+|
T Consensus 160 ~-------------------~~~~~~~~-----------------~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v 203 (248)
T d1snya_ 160 Q-------------------GNTDGGMY-----------------AYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWV 203 (248)
T ss_dssp T-------------------TCCSCCCH-----------------HHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSB
T ss_pred C-------------------CCCCCChH-----------------HHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcc
Confidence 0 01334445 89999999999999999999999999999999999
Q ss_pred CCCChhh
Q 017757 259 ETPGLEE 265 (366)
Q Consensus 259 ~T~~~~~ 265 (366)
+|++...
T Consensus 204 ~T~m~~~ 210 (248)
T d1snya_ 204 KTDMGGS 210 (248)
T ss_dssp CSTTTCT
T ss_pred cCCcccc
Confidence 9998764
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.3e-39 Score=288.65 Aligned_cols=213 Identities=13% Similarity=0.067 Sum_probs=179.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh------c
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE------A 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~------~ 109 (366)
+||++|||||++|||+++|++|+++|++|+++++++... ........+|.++.++++.+.+. .
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----------ASASVIVKMTDSFTEQADQVTAEVGKLLGD 69 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccccceeecccCcHHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999999999999976531 23456677888888877766544 2
Q ss_pred CCCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 ~~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|++|||||.... ....+.+.++|++++++|+.+++++++.++|+|++ .|+||++||.++..
T Consensus 70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-----~G~Iv~isS~~~~~---------- 134 (236)
T d1dhra_ 70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-----GGLLTLAGAKAALD---------- 134 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCGGGGS----------
T ss_pred CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-----ccceeEEccHHHcC----------
Confidence 479999999997655 45566778999999999999999999999999965 58999999999987
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc--cCCcEEEEEcCCCCCCCChhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTETPGLEEE 266 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~Vn~V~PG~v~T~~~~~~ 266 (366)
+.++.. +|++||+|+.+|+++||.|++ ++|||||+|+||+++|++.+..
T Consensus 135 ------------~~~~~~-----------------~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~ 185 (236)
T d1dhra_ 135 ------------GTPGMI-----------------GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS 185 (236)
T ss_dssp ------------CCTTBH-----------------HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH
T ss_pred ------------CccCCc-----------------ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhh
Confidence 778888 999999999999999999998 6899999999999999987653
Q ss_pred hhcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHH
Q 017757 267 NKRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVV 334 (366)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~ 334 (366)
.... +.++...|++++..+.||+ +++..++||+.+.|
T Consensus 186 ~~~~---------------------------~~~~~~~pe~va~~~~~l~----s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 186 MPEA---------------------------DFSSWTPLEFLVETFHDWI----TGNKRPNSGSLIQV 222 (236)
T ss_dssp STTS---------------------------CGGGSEEHHHHHHHHHHHH----TTTTCCCTTCEEEE
T ss_pred Cccc---------------------------hhhcCCCHHHHHHHHHHHh----CCCccCCCCCeEEE
Confidence 2210 1245677888899999999 99999999987655
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=4.9e-37 Score=279.67 Aligned_cols=244 Identities=19% Similarity=0.194 Sum_probs=170.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-----cCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-----AGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-----~~~i 112 (366)
|++|||||++|||+++|++|+++|++|++++|+..+ ..+|+++.+..+....+ .+.+
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------~~~d~~~~~~~~~~~~~~~~~~~~~i 63 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADLSTAEGRKQAIADVLAKCSKGM 63 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------EECCTTSHHHHHHHHHHHHTTCTTCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------HHHHhcCHHHHHHHHHHHHHHhCCCC
Confidence 899999999999999999999999999999997642 35689998887765543 3679
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+++||||+.... +.++...++|..+...+.+...+.+.+.. ...+..+++...............
T Consensus 64 d~lv~~Ag~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---- 129 (257)
T d1fjha_ 64 DGLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGH---QPAAVVISSVASAHLAFDKNPLAL---- 129 (257)
T ss_dssp SEEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS---SCEEEEECCGGGGSSCGGGCTTHH----
T ss_pred cEEEEcCCCCCcH-------HHHHHHHHHHHHHHHHHHHHhhhhhhhhc---cCcceeeeeccccchhhhhhhhhh----
Confidence 9999999975432 34677889999999999999999998876 456777766544321000000000
Q ss_pred ccccccCCCCCCccccccccccccc-cccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQF-CLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRP 271 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~ 271 (366)
........+..+..+.. ..++..+|++||+|+.+|+|++|.||+++|||||+|+||+++|++.+....
T Consensus 130 --------~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~--- 198 (257)
T d1fjha_ 130 --------ALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--- 198 (257)
T ss_dssp --------HHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------
T ss_pred --------hccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcC---
Confidence 00000111111221111 223345899999999999999999999999999999999999998765422
Q ss_pred cchhhhhccCCCCCHHHHHHHHHh-hhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 017757 272 RLTSIIAASSGAMKADEVAKKALD-GIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVVAAGLIRFV 342 (366)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~a~~~~~-~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~dgG~~~~~ 342 (366)
.++..+.+.+ ..|.||+++|+|+++.+.||+ |++++|+|||+|.+|||++..+
T Consensus 199 --------------~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~----S~~s~~itG~~i~vDGG~tav~ 252 (257)
T d1fjha_ 199 --------------DPRYGESIAKFVPPMGRRAEPSEMASVIAFLM----SPAASYVHGAQIVIDGGIDAVM 252 (257)
T ss_dssp ------------------------CCCSTTSCCCTHHHHHHHHHHT----SGGGTTCCSCEEEESTTHHHHH
T ss_pred --------------CHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh----CchhCCccCceEEeCCCccchh
Confidence 2233333333 369999999999999999999 9999999999999999999754
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.7e-35 Score=266.51 Aligned_cols=213 Identities=15% Similarity=0.101 Sum_probs=169.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh------cC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE------AG 110 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~------~~ 110 (366)
.++||||||++|||+++|++|+++|++|++++|++++. ........+|+++.+......+. ++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----------ADSNILVDGNKNWTEQEQSILEQTASSLQGS 70 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-----------ccccceeccccCchhHHHHHHHHHHHHhcCC
Confidence 45679999999999999999999999999999987642 22445667788877765544332 48
Q ss_pred CCcEEEEcCCCCCC-CCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 111 PVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 111 ~id~vi~nAG~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
++|+||||||.... ..+.+.+.++|+.++++|+.++++++|+++|+|++ .|+||++||..+..
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-----~g~Iv~isS~~~~~----------- 134 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-----GGLLQLTGAAAAMG----------- 134 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-----EEEEEEECCGGGGS-----------
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-----ceEEEEeccHHhcC-----------
Confidence 89999999998665 34455567889999999999999999999999976 47999999999887
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc--cCCcEEEEEcCCCCCCCChhhhh
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI--ADDIHVSLIFPPDTETPGLEEEN 267 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~Vn~V~PG~v~T~~~~~~~ 267 (366)
+.++.. .|++||+|+.+|+++||.|++ +.+|+||+|+||+++|++.++..
T Consensus 135 -----------~~~~~~-----------------~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~ 186 (235)
T d1ooea_ 135 -----------PTPSMI-----------------GYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM 186 (235)
T ss_dssp -----------CCTTBH-----------------HHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS
T ss_pred -----------Cccccc-----------------chHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC
Confidence 777777 999999999999999999998 57999999999999999887653
Q ss_pred hcCCcchhhhhccCCCCCHHHHHHHHHhhhhCCCeEeeCCchhHHHHHHhcCCCCchhHHHHHHHHH
Q 017757 268 KRRPRLTSIIAASSGAMKADEVAKKALDGIKSGSFIVPCNSEGFLLSIATAGLSPQRSVLMAFVEVV 334 (366)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr~~~~~~v~~~~~~L~~~~~s~~~~~itG~~i~~ 334 (366)
.... ...+.+|+++++.+ +.|+. ++.++++||+.++|
T Consensus 187 ~~~~--------~~~~~~~~~va~~~------------------~~~l~----~~~~~~~tG~~i~v 223 (235)
T d1ooea_ 187 PNAD--------HSSWTPLSFISEHL------------------LKWTT----ETSSRPSSGALLKI 223 (235)
T ss_dssp TTCC--------GGGCBCHHHHHHHH------------------HHHHH----CGGGCCCTTCEEEE
T ss_pred cCCc--------cccCCCHHHHHHHH------------------HHHhc----CccccCCCceEEEE
Confidence 2211 11234555555433 23566 77778888887776
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.96 E-value=3.1e-29 Score=228.39 Aligned_cols=211 Identities=18% Similarity=0.265 Sum_probs=167.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc---hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG---KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-- 109 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-- 109 (366)
.++++|||||++|||+++|++|+++|+ +|++++|+. +..++..++++.. +.++.++.||++|++++++++++.
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dv~d~~~~~~~~~~i~~ 86 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GARTTVAACDVTDRESVRELLGGIGD 86 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc-cccccccccccchHHHHHHhhccccc
Confidence 367999999999999999999999999 589999974 4456666666544 789999999999999999999874
Q ss_pred -CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccC
Q 017757 110 -GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKG 188 (366)
Q Consensus 110 -~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~ 188 (366)
+++|.+|||+|.....++.+.++++|++.+++|+.+++++.+.+ .+.+ .++||++||.++..
T Consensus 87 ~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~---~~~iv~~SS~a~~~---------- 149 (259)
T d2fr1a1 87 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELD---LTAFVLFSSFASAF---------- 149 (259)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSC---CSEEEEEEEHHHHT----------
T ss_pred cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccC---CceEeeecchhhcc----------
Confidence 57999999999999999999999999999999999999887754 3333 67999999999988
Q ss_pred ccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh
Q 017757 189 INENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK 268 (366)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~ 268 (366)
+.++.. .|+++|+++++|++.++ ..|++|++|+||.+.++.+.....
T Consensus 150 ------------g~~~~~-----------------~YaAaka~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~ 196 (259)
T d2fr1a1 150 ------------GAPGLG-----------------GYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV 196 (259)
T ss_dssp ------------CCTTCT-----------------TTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC---------
T ss_pred ------------CCcccH-----------------HHHHHHHhHHHHHHHHH----hCCCCEEECCCCcccCCccccchH
Confidence 888888 99999999988776655 469999999999987664432211
Q ss_pred cCCcchhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 269 RRPRLTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
. ..+...+...++|++.++.+...+..++
T Consensus 197 ~----~~~~~~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 197 A----DRFRRHGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp -------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred H----HHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 1 1111222346899999998888877664
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=2.5e-18 Score=162.58 Aligned_cols=185 Identities=14% Similarity=0.066 Sum_probs=129.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh-----HHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK-----LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.|+||||||+|.||.+++++|.++|++|++++|.... ++....+. .....++.++++|++|.++++++++.. .
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~ 78 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP-HTCNPKFHLHYGDLSDTSNLTRILREV-Q 78 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH-C
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhh-hhcCCCeEEEEeecCCHHHHHHHHhcc-C
Confidence 3899999999999999999999999999999995432 22222211 122457999999999999999999876 5
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|+++|+|+..+... +.++.+..+++|+.|+.++++++...-.+ ...++|++||...+..+ .. ..+
T Consensus 79 ~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~~~----~~~r~i~~SS~~vYG~~-~~---~~~-- 144 (357)
T d1db3a_ 79 PDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLGLE----KKTRFYQASTSELYGLV-QE---IPQ-- 144 (357)
T ss_dssp CSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTTCT----TTCEEEEEEEGGGGTTC-CS---SSB--
T ss_pred CCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhCCC----CCcEEEEEEchhhhCCC-CC---CCc--
Confidence 899999999866432 23445667899999999999988543222 14589999997654310 00 000
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+ +..+..+...|+.||.+.+.+++.++..+ ++++..+.|+.+.+|.
T Consensus 145 ----~------------------E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~ 190 (357)
T d1db3a_ 145 ----K------------------ETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPR 190 (357)
T ss_dssp ----C------------------TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred ----C------------------CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCC
Confidence 0 11111122379999999999999988875 7888889988777763
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.76 E-value=4e-20 Score=160.07 Aligned_cols=114 Identities=17% Similarity=0.195 Sum_probs=97.6
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
....+|+||+++||||++|||+++|++|+++|++|++++|+.++++++.+++..... +....+|++|.+++++++.
T Consensus 16 ~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~-- 91 (191)
T d1luaa1 16 AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK--VNVTAAETADDASRAEAVK-- 91 (191)
T ss_dssp HTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHT--CCCEEEECCSHHHHHHHTT--
T ss_pred HcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccc--hhhhhhhcccHHHHHHHhc--
Confidence 446799999999999999999999999999999999999999999999998876533 4468899999999988875
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHH
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKA 152 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ 152 (366)
++|+||||||+.. ...+.++|+..+++|+.+.++....
T Consensus 92 -~iDilin~Ag~g~----~~~~~e~~~~~~~~nv~~~~~~~~~ 129 (191)
T d1luaa1 92 -GAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQPP 129 (191)
T ss_dssp -TCSEEEECCCTTC----CCBCHHHHHTCTTCCEEEECCCSSS
T ss_pred -CcCeeeecCcccc----ccCCHHHHHhhhcceeehhHhhHHH
Confidence 7899999999643 3468999999999998877765433
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.71 E-value=8.2e-17 Score=151.11 Aligned_cols=182 Identities=15% Similarity=0.167 Sum_probs=126.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
|+||||||+|.||++++++|+++|++|+++++....-.+...........++.++.+|++|.++++++++.. ++|+|||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~d~Vih 80 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-KIDSVIH 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-CCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-CCCEEEE
Confidence 789999999999999999999999999999864322122222223333567889999999999999999887 6999999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+|+...... ..+.......+|+.++.++++++... + ..+++++||...+..+.+.....
T Consensus 81 lAa~~~~~~----~~~~~~~~~~~N~~~t~~ll~~~~~~----~---i~~~i~~SS~~vyg~~~~~~~~~---------- 139 (347)
T d1z45a2 81 FAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQY----N---VSKFVFSSSATVYGDATRFPNMI---------- 139 (347)
T ss_dssp CCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHHH----T---CCEEEEEEEGGGGCCGGGSTTCC----------
T ss_pred ccccccccc----cccCcccccccchhhhHHHHHHHHhc----c---cceEEeecceeeecCcccCCCCC----------
Confidence 999653221 33444678889999999999998542 2 45899999987665211110000
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCC
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPP 256 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG 256 (366)
+..+..+..+...|+.||.+.+.+++.+.... ..++++..+.|+
T Consensus 140 --------------~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~ 183 (347)
T d1z45a2 140 --------------PIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYF 183 (347)
T ss_dssp --------------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEEC
T ss_pred --------------ccccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeec
Confidence 01111122223389999999999988887653 235666655544
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=7.4e-17 Score=150.97 Aligned_cols=182 Identities=20% Similarity=0.178 Sum_probs=129.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++|||||+|.||.+++++|+++|++|++++|.....+............++.++++|++|.+.+.++++.. ++|+|||+
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~d~ViHl 80 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-AIDTVIHF 80 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-TCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-CCCEEEEC
Confidence 49999999999999999999999999999874332222222333333568999999999999999999976 58999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
|+..... .+.++.+..+++|+.|+.++++++... + ..++|++||...+...... ...+ .
T Consensus 81 Aa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~---v~~~i~~Ss~~vy~~~~~~---------~~~e-~ 139 (338)
T d1udca_ 81 AGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRAA----N---VKNFIFSSSATVYGDQPKI---------PYVE-S 139 (338)
T ss_dssp CSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHH----T---CCEEEEEEEGGGGCSCCSS---------SBCT-T
T ss_pred CCccchh----hHHhCHHHHHHhHHHHHHHHHHHHHHh----C---CCEEEecCcceEEcccccc---------cccc-c
Confidence 9964321 244456789999999999999988654 2 4589999997765411100 0000 0
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
.+... +...|+.+|.+.+.+.+....+. .++++..+.|+.+.++
T Consensus 140 ~~~~~-----------------p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 183 (338)
T d1udca_ 140 FPTGT-----------------PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA 183 (338)
T ss_dssp SCCCC-----------------CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred cccCC-----------------CcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEec
Confidence 01111 22389999999999998777764 4677777777666554
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.68 E-value=1.8e-16 Score=148.57 Aligned_cols=202 Identities=16% Similarity=0.092 Sum_probs=134.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
+||+||||||+|.||.+++++|+++|++|+++.|+.++.+.......... ......+..|++|.+++.+++. .+|+
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~~~ 86 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---GAAG 86 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT---TCSE
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc---cchh
Confidence 59999999999999999999999999999999999877666554433322 3345567789999998877765 6899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
++|+|+..... .++ ...+..|+.|+.++++.+... + ...++|++||..+...+.........+ +.
T Consensus 87 v~~~a~~~~~~----~~~---~~~~~~nv~gt~~ll~~~~~~----~--~v~~~i~~SS~~~~~~~~~~~~~~~~~-e~- 151 (342)
T d1y1pa1 87 VAHIASVVSFS----NKY---DEVVTPAIGGTLNALRAAAAT----P--SVKRFVLTSSTVSALIPKPNVEGIYLD-EK- 151 (342)
T ss_dssp EEECCCCCSCC----SCH---HHHHHHHHHHHHHHHHHHHTC----T--TCCEEEEECCGGGTCCCCTTCCCCEEC-TT-
T ss_pred hhhhccccccc----ccc---cccccchhhhHHHHHHhhhcc----c--ccccccccccceeeccCCCCCCCcccc-cc-
Confidence 99999865321 233 345778999999988887432 1 256999999976544221111100000 00
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
..+......-....+..+..+...|+.||.+.+.+++.+++... .++++.+|+|+.+..|.
T Consensus 152 ------~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~ 212 (342)
T d1y1pa1 152 ------SWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTI 212 (342)
T ss_dssp ------CCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCC
T ss_pred ------ccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCC
Confidence 00000000000111112222334899999999999999888764 46888888888776654
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=1.7e-16 Score=148.42 Aligned_cols=184 Identities=14% Similarity=0.037 Sum_probs=126.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-----hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-----KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-----~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
|++|||||+|.||.+++++|.++|++|+.++|... +++............++.++.+|++|.+.+.++++.. .+
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~ 80 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-KP 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-CC
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-cc
Confidence 44599999999999999999999999999999643 2222222222222357899999999999999999877 57
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
++++|+|+..... ...+.....+++|+.|+.++++++..+-... ..++|++||.+.+..+ + ...
T Consensus 81 ~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~----~~~~i~~SS~~vyg~~-~---~~~---- 144 (347)
T d1t2aa_ 81 TEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN----SVKFYQASTSELYGKV-Q---EIP---- 144 (347)
T ss_dssp SEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT----TCEEEEEEEGGGTCSC-S---SSS----
T ss_pred ceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCCCC----CcEEEEecchheecCC-C---CCC----
Confidence 8888888764322 2345556678999999999998886543221 3589999997654310 0 000
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
..+..+..+...|+.||.+.+.+++.+++.+ ++.+..+.|+.+..|
T Consensus 145 --------------------~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp 190 (347)
T d1t2aa_ 145 --------------------QKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP 190 (347)
T ss_dssp --------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred --------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCC
Confidence 0111112223379999999999998887764 778888888766665
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.67 E-value=7.6e-16 Score=146.77 Aligned_cols=198 Identities=13% Similarity=0.074 Sum_probs=135.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC----------------chhHHHHHHHHHhhcCCeEEEEEecCCCHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARS----------------GKKLEEAKQSIQLATGIEVATYSADVRDFD 100 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~----------------~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~ 100 (366)
|++||||||+|.||.+++++|+++|++|+++|.- .....+.........+.++.++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 7899999999999999999999999999998721 112223333444444678999999999999
Q ss_pred HHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccccc
Q 017757 101 AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWT 180 (366)
Q Consensus 101 ~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~ 180 (366)
.++++++.. ++|+|+|.|+..... ....+.+.....+++|+.|+.++++++...-. ..++++.||.......
T Consensus 81 ~l~~~~~~~-~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~------~~~~i~~ss~~~~~~~ 152 (393)
T d1i24a_ 81 FLAESFKSF-EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE------ECHLVKLGTMGEYGTP 152 (393)
T ss_dssp HHHHHHHHH-CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT------TCEEEEECCGGGGCCC
T ss_pred HHHHHHHhh-cchheeccccccccc-cccccccccccccccccccccHHHHHHHHhcc------ccceeecccccccccc
Confidence 999999987 699999999864321 12246677788999999999999998854322 2467777776554311
Q ss_pred ccccC--ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCC
Q 017757 181 IKNTN--MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDT 258 (366)
Q Consensus 181 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v 258 (366)
-.+.. .....+. ......+.+..+...|+.||.+.+.+++.++.++ ++++.++.|+.+
T Consensus 153 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v 212 (393)
T d1i24a_ 153 NIDIEEGYITITHN-----------------GRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVV 212 (393)
T ss_dssp SSCBCSSEEEEEET-----------------TEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred cccccccccccccc-----------------ccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccc
Confidence 10000 0000000 0000111222333479999999999998888765 788888888877
Q ss_pred CCCC
Q 017757 259 ETPG 262 (366)
Q Consensus 259 ~T~~ 262 (366)
..+.
T Consensus 213 ~G~~ 216 (393)
T d1i24a_ 213 YGVK 216 (393)
T ss_dssp ECSC
T ss_pred cCCC
Confidence 7654
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.66 E-value=2.5e-16 Score=148.95 Aligned_cols=232 Identities=14% Similarity=0.103 Sum_probs=146.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCchhHHHHHHHHHh-hcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQL-ATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l-~~r~~~~~~~~~~~l~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+||||||+|.||++++++|+++|++|++ +++...... ...+.. ....++.++.+|++|.++++++++.. .+|+||
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~d~Vi 78 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-QPDAVM 78 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-CCCEEE
Confidence 5899999999999999999999998554 444221100 011111 11357899999999999999999877 699999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCcEEEEecCCccccccccccCccCcccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQN--GGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~--~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|+|+..... .+.++....+++|+.|+.++++.+......... ....++|++||...+.........+.......
T Consensus 79 hlAa~~~~~----~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~ 154 (361)
T d1kewa_ 79 HLAAESHVD----RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL 154 (361)
T ss_dssp ECCSCCCHH----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC
T ss_pred ECccccchh----hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCC
Confidence 999864321 133455678999999999999999887543100 01358999999876652111100000000000
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh------h--
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE------E-- 266 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~------~-- 266 (366)
.. +..+..+...|+.||.+.+.+++.++..+ |+++.++.|+.|..|.... .
T Consensus 155 ~~------------------e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~ 213 (361)
T d1kewa_ 155 FT------------------ETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVIL 213 (361)
T ss_dssp BC------------------TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHH
T ss_pred cc------------------cCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHH
Confidence 00 01111222379999999999999998875 6888888887776654221 1
Q ss_pred --hhcCCcchhhhhcc---CCCCCHHHHHHHHHhhhhCC
Q 017757 267 --NKRRPRLTSIIAAS---SGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 267 --~~~~~~~~~~~~~~---~~~~~~~~~a~~~~~~i~~g 300 (366)
...++ . .....+ ..++..+++++.+...+..+
T Consensus 214 ~~~~g~~-~-~v~g~g~~~r~~i~v~D~a~ai~~~~~~~ 250 (361)
T d1kewa_ 214 NALEGKP-L-PIYGKGDQIRDWLYVEDHARALHMVVTEG 250 (361)
T ss_dssp HHHHTCC-E-EEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHcCCC-c-EEeCCCCeEEeCEEHHHHHHHHHHHHhcC
Confidence 00010 0 000000 11357899999888877554
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.65 E-value=9.4e-16 Score=142.74 Aligned_cols=186 Identities=15% Similarity=0.048 Sum_probs=130.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-----hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-----KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-----~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
|++|||||+|.||++++++|+++|++|+.++|..+ +.+.............+.+..+|+++.+++.+.++.. ++
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~-~~ 80 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-KP 80 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-CC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh-cc
Confidence 89999999999999999999999999999998532 2222222222222457889999999999999998876 69
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINEN 192 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~ 192 (366)
|+|||+|+..... ...++....+++|..+...++.++.....+... ..++++.||..... +.. ..+
T Consensus 81 D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~~ss~~~~~-~~~----~~~--- 146 (339)
T d1n7ha_ 81 DEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR--TVKYYQAGSSEMFG-STP----PPQ--- 146 (339)
T ss_dssp SEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC--CCEEEEEEEGGGGT-TSC----SSB---
T ss_pred chhhhcccccccc----ccccCccccccccccccchhhhhhhhccccccc--ceeeeecccceecc-cCC----CCC---
Confidence 9999999965432 134556778999999999999998776555331 34566666654332 000 000
Q ss_pred ccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 193 KLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
.+..+..+...|+.+|.+.+.++...++.+ ++++..+.|+.|..|.
T Consensus 147 ---------------------~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~ 192 (339)
T d1n7ha_ 147 ---------------------SETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPR 192 (339)
T ss_dssp ---------------------CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred ---------------------CCCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCC
Confidence 111122223389999999999998888765 7899999998887764
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=2.6e-15 Score=130.45 Aligned_cols=192 Identities=14% Similarity=0.130 Sum_probs=125.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
|..|+++||||||+||++++++|+++|++|+++.|++++++.. ....+.++.+|++|.+++.++++ ..|+
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-------~~~~~~~~~gD~~d~~~l~~al~---~~d~ 70 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------GPRPAHVVVGDVLQAADVDKTVA---GQDA 70 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------SCCCSEEEESCTTSHHHHHHHHT---TCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-------cccccccccccccchhhHHHHhc---CCCE
Confidence 4678999999999999999999999999999999998774321 23467889999999999999887 6899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
|||++|...+.... +++..+..++++ .+++++ ..++|++||.....
T Consensus 71 vi~~~g~~~~~~~~-----------~~~~~~~~~l~~----aa~~~~---v~r~i~~ss~~~~~---------------- 116 (205)
T d1hdoa_ 71 VIVLLGTRNDLSPT-----------TVMSEGARNIVA----AMKAHG---VDKVVACTSAFLLW---------------- 116 (205)
T ss_dssp EEECCCCTTCCSCC-----------CHHHHHHHHHHH----HHHHHT---CCEEEEECCGGGTS----------------
T ss_pred EEEEeccCCchhhh-----------hhhHHHHHHHHH----HHHhcC---CCeEEEEeeeeccC----------------
Confidence 99999975433221 233344444444 445544 56999999865543
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhhcCCcch
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENKRRPRLT 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~~~~~~~ 274 (366)
..+... +....|...|.+.+.+. ...|++...|.||.+........ ....
T Consensus 117 ------~~~~~~-------------~~~~~~~~~~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~----~~~~ 166 (205)
T d1hdoa_ 117 ------DPTKVP-------------PRLQAVTDDHIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGA----YTVT 166 (205)
T ss_dssp ------CTTCSC-------------GGGHHHHHHHHHHHHHH-------HHTCSEEEEECCSEEECCCCCSC----CEEE
T ss_pred ------CCcccc-------------ccccccchHHHHHHHHH-------HhcCCceEEEecceecCCCCccc----EEEe
Confidence 111111 00115666666554432 23689999999987743211110 0000
Q ss_pred hhhhccCCCCCHHHHHHHHHhhhhCC
Q 017757 275 SIIAASSGAMKADEVAKKALDGIKSG 300 (366)
Q Consensus 275 ~~~~~~~~~~~~~~~a~~~~~~i~~g 300 (366)
..-......++.+++|+.+++.+...
T Consensus 167 ~~~~~~~~~i~~~DvA~~~~~~l~~~ 192 (205)
T d1hdoa_ 167 LDGRGPSRVISKHDLGHFMLRCLTTD 192 (205)
T ss_dssp SSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred eCCCCCCCcCCHHHHHHHHHHHhCCC
Confidence 00111223568899999988887544
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.61 E-value=2.9e-15 Score=139.89 Aligned_cols=184 Identities=16% Similarity=0.086 Sum_probs=131.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch----hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK----KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~----~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
..+-|++|||||+|.||++++++|.++|++|++++|... ..+............++.++.+|..|.........
T Consensus 13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-- 90 (341)
T d1sb8a_ 13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-- 90 (341)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--
Confidence 346789999999999999999999999999999987332 22222222222223578999999999998776666
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
..+.++|.++..... .+.++....+++|+.|+.++++++... + ..++|++||...+...
T Consensus 91 -~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~---~~~~i~~SS~~vyg~~--------- 149 (341)
T d1sb8a_ 91 -GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----K---VQSFTYAASSSTYGDH--------- 149 (341)
T ss_dssp -TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T---CSEEEEEEEGGGGTTC---------
T ss_pred -ccccccccccccccc----ccccCccchhheeehhHHHHHHHHHhc----C---CceEEEcccceeeCCC---------
Confidence 679999998754321 245667789999999999999988533 2 4599999998876411
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+... ..+..+..+...|+.||.+.+.+++.++... ++++..+.|+.+.++.
T Consensus 150 -------------~~~~------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~ 200 (341)
T d1sb8a_ 150 -------------PGLP------KVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRR 200 (341)
T ss_dssp -------------CCSS------BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTT
T ss_pred -------------CCCC------ccCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccC
Confidence 0000 0011111222389999999999999998765 6788888888776553
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.59 E-value=5.7e-15 Score=138.26 Aligned_cols=187 Identities=12% Similarity=0.046 Sum_probs=132.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.+||+||||||+|.||.+++++|.++|++|++++|+........+.... ...+.++.+|++|++.+.++++.. .+|+
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~--~~~i~~~~~Dl~d~~~l~~~~~~~-~~~~ 82 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDIRDQNKLLESIREF-QPEI 82 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT--TTTSEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc--ccCCeEEEeeccChHhhhhhhhhc-hhhh
Confidence 6899999999999999999999999999999999987654443333221 346889999999999999998876 6899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKL 194 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~ 194 (366)
++|+|+..... .+.+..+..+++|+.++.++++++...-. ...+++.||.......... .
T Consensus 83 v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~------~~~~~~~s~~~~~~~~~~~----------~ 142 (356)
T d1rkxa_ 83 VFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAIRHVGG------VKAVVNITSDKCYDNKEWI----------W 142 (356)
T ss_dssp EEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHHCC------CCEEEEECCGGGBCCCCSS----------S
T ss_pred hhhhhcccccc----ccccCCccccccccccchhhhhhhhcccc------ccccccccccccccccccc----------c
Confidence 99999864331 23455677899999999999988854311 2355555554433210000 0
Q ss_pred ccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc------cCCcEEEEEcCCCCCCC
Q 017757 195 CESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI------ADDIHVSLIFPPDTETP 261 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~------~~gI~Vn~V~PG~v~T~ 261 (366)
. ..+..+..+...|+.+|.+.+.+++..+.++. ..++.+..+.|+.+..|
T Consensus 143 ~-----------------~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp 198 (356)
T d1rkxa_ 143 G-----------------YRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG 198 (356)
T ss_dssp C-----------------BCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred c-----------------cccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCC
Confidence 0 00111122233899999999999998888664 34678888888766554
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.59 E-value=3.8e-15 Score=139.48 Aligned_cols=192 Identities=14% Similarity=0.155 Sum_probs=126.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
.|.||||||+|.||.+++++|.++|++|.+++++.-.-......+....+.++.++.+|++|.+.+.++++ ..|.++
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~---~~~~v~ 78 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA---KADAIV 78 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT---TCSEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh---hhhhhh
Confidence 57899999999999999999999998765554431000000011122235689999999999999999987 678899
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
|.|+...... ..++....+++|+.|+.+++.++... ..+++++||...+...+....... ....
T Consensus 79 ~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~~~--------~~k~i~~ss~~vyg~~~~~~~~~~-~~~~--- 142 (346)
T d1oc2a_ 79 HYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAARKY--------DIRFHHVSTDEVYGDLPLREDLPG-HGEG--- 142 (346)
T ss_dssp ECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHHH--------TCEEEEEEEGGGGCCBCCGGGSTT-TTCS---
T ss_pred hhhhcccccc----hhhCcccceeeehHhHHhhhhhhccc--------cccccccccceEecccCccccccc-cccC---
Confidence 9998654321 22344678899999999999877433 247788877665431111110000 0000
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
+.....+..+..+...|+.+|.+.+.+++..+.++ |+++.++.|+.+..|.
T Consensus 143 ------------~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~ 193 (346)
T d1oc2a_ 143 ------------PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPY 193 (346)
T ss_dssp ------------TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTT
T ss_pred ------------cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCC
Confidence 00001111222233489999999999999888775 8999999998887753
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.58 E-value=6.3e-15 Score=136.08 Aligned_cols=181 Identities=15% Similarity=0.058 Sum_probs=125.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH-HHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE-EAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
|+||||||+|.||++++++|+++|++|+.++|...... ...+.+.. ..++.++.+|++|.+++.+.+... ..++++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-~~~~~~ 77 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI--EGDIQYEDGDMADACSVQRAVIKA-QPQEVY 77 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC--GGGEEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc--cCCcEEEEccccChHHhhhhhccc-cccccc
Confidence 78999999999999999999999999999998653211 11222211 347899999999999999998876 467888
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
|+|+...... ..+.....+++|+.|+.++++++...-. ..++++.||..-.. ..... .
T Consensus 78 ~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~~~------~~~~i~~Ss~~~~~-~~~~~---~-------- 135 (321)
T d1rpna_ 78 NLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQFSP------ETRFYQASTSEMFG-LIQAE---R-------- 135 (321)
T ss_dssp ECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHHCT------TSEEEEEEEGGGGC-SCSSS---S--------
T ss_pred cccccccccc----cccchHHHHhhhhhchHHHHHHHHHhCC------CcccccccchhhcC-cccCC---C--------
Confidence 8887543321 2233467889999999999888854321 24677777654332 00000 0
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
..+..+..+...|+.||.+.+.+++.++.++ ++++..+.|+.+..|.
T Consensus 136 ----------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~ 182 (321)
T d1rpna_ 136 ----------------QDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL 182 (321)
T ss_dssp ----------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred ----------------CCCCCCccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCC
Confidence 0111122233389999999999999988775 6788888887666553
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1.3e-14 Score=135.67 Aligned_cols=182 Identities=18% Similarity=0.183 Sum_probs=125.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEec------CchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILAR------SGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r------~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
|+||||||+|.||.+++++|+++|++|+.+++ +.....+..+.+......++.++.+|++|.+.+++++... .
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~ 81 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-S 81 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-C
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc-c
Confidence 78899999999999999999999999999874 2222222333333334668899999999999999988875 5
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+++++|+|+..... .+.++....+++|+.++.++++++. +.+ ..+++++||...+..+....
T Consensus 82 ~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~----~~~---v~~~i~~ss~~~~~~~~~~~------- 143 (346)
T d1ek6a_ 82 FMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMK----AHG---VKNLVFSSSATVYGNPQYLP------- 143 (346)
T ss_dssp EEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTT---CCEEEEEEEGGGGCSCSSSS-------
T ss_pred cccccccccccCcH----hhHhCHHHHHHhhhcccccccchhh----hcC---cccccccccceeeecccccc-------
Confidence 88999999975432 2334456789999999999888874 222 45899998877664211100
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTET 260 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T 260 (366)
.+...+...... .|+.+|.+.+...+.++.. ..++....+.|+.+.+
T Consensus 144 ---~~~~~~~~~~~~-----------------~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G 190 (346)
T d1ek6a_ 144 ---LDEAHPTGGCTN-----------------PYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTG 190 (346)
T ss_dssp ---BCTTSCCCCCSS-----------------HHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEEC
T ss_pred ---ccccccccccCC-----------------hHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceec
Confidence 000000111222 7999999998888877653 2466776666655444
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=1.7e-14 Score=134.45 Aligned_cols=179 Identities=13% Similarity=0.040 Sum_probs=123.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
+||||||+|.||++++++|+++| .+|+++++......... ...++.++++|+++.+++.+.+.+ .+|+|||
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~------~~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih 73 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVK--KCDVVLP 73 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc------cCCCeEEEECccCChHHHHHHHHh--CCCcccc
Confidence 48999999999999999999999 47999988665433221 145799999999998777664433 5899999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+|+...... ..++....+++|+.|+.++++++... ..+.+++||...+..+........ ....
T Consensus 74 ~a~~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~~--------~~~~~~~ss~~~~~~~~~~~~~~~----~~~~- 136 (342)
T d2blla1 74 LVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVKY--------RKRIIFPSTSEVYGMCSDKYFDED----HSNL- 136 (342)
T ss_dssp CBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHT--------TCEEEEECCGGGGBTCCCSSBCTT----TCCC-
T ss_pred ccccccccc----cccCCccccccccccccccccccccc--------cccccccccccccccccccccccc----cccc-
Confidence 999754321 33445678999999999999997432 246677777666542211111000 0000
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
.......+...|+.||.+.+.+++..++.+ |+++..+.|+.+..+
T Consensus 137 ----------------~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~ 181 (342)
T d2blla1 137 ----------------IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGP 181 (342)
T ss_dssp ----------------BCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECS
T ss_pred ----------------cccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccc
Confidence 001111222389999999999999998876 788888877776655
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.55 E-value=1.6e-14 Score=133.01 Aligned_cols=167 Identities=17% Similarity=0.136 Sum_probs=120.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
.|+||||||+|.||++++++|+++|+.++++++.. .+|+++.+.++++++.. .+|.++
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------~~~~~~~~~~~~~~~~~-~~d~v~ 59 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE-RIDQVY 59 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH-CCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------hccccCHHHHHHHHhhc-CCCEEE
Confidence 46899999999999999999999999988765432 15899999999998765 689999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
|+|+...... ....+..+.+++|+.++.++++++..+ + ..++|++||.+.+..+.. .+..+....
T Consensus 60 ~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~---v~~~i~~SS~~vyg~~~~----~~~~E~~~~- 124 (315)
T d1e6ua_ 60 LAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAAHQN----D---VNKLLFLGSSCIYPKLAK----QPMAESELL- 124 (315)
T ss_dssp ECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT----T---CCEEEEECCGGGSCTTCC----SSBCGGGTT-
T ss_pred Ecchhccccc---cchhhHHHHHHHHHHHHHHHHHHHHHc----C---CCEEEEECCceEcCCCCC----CCccCCccc-
Confidence 9997643211 234445667889999999998888543 2 458999999887652111 001110000
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCC
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETP 261 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~ 261 (366)
..++.+.. ..|+.||.+.+.+++.+..+. |+++..+.|+.|..|
T Consensus 125 -~~~~~~~~-----------------~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp 168 (315)
T d1e6ua_ 125 -QGTLEPTN-----------------EPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGP 168 (315)
T ss_dssp -SSCCCGGG-----------------HHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEST
T ss_pred -cCCCCCCC-----------------CHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECC
Confidence 00011112 279999999999999998875 789999999877665
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.55 E-value=6.3e-14 Score=132.86 Aligned_cols=191 Identities=18% Similarity=0.134 Sum_probs=131.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH-CCCeEEEEec---------CchhHHHHHHHHHhh-------cCCeEEEEEecCCCH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAK-EGARVSILAR---------SGKKLEEAKQSIQLA-------TGIEVATYSADVRDF 99 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~-~G~~V~l~~r---------~~~~~~~~~~~l~~~-------~~~~v~~~~~Dls~~ 99 (366)
+.+||||||+|.||.+++++|++ .|++|+++|+ ..+..+.....+... ....+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 34699999999999999999986 6899999874 122233333333322 124678899999999
Q ss_pred HHHHHHHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccc
Q 017757 100 DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCW 179 (366)
Q Consensus 100 ~~v~~~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~ 179 (366)
+.++++++...++|+|+|+|+...... ..+.....+++|+.++..+++++... + ..++++++|......
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~~~~----~---~~~~~~~~s~~~~~~ 150 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLLH----K---CDKIIFSSSAAIFGN 150 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHT----T---CCEEEEEEEGGGTBS
T ss_pred HHhhhhhhccceeehhhcccccccccc----cccccccccccccccccccchhhhcc----C---Ccccccccccccccc
Confidence 999999999888999999999754321 33445678899999999999888532 2 357777777665441
Q ss_pred cccccCccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCC
Q 017757 180 TIKNTNMKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTE 259 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~ 259 (366)
..... ......+..+..+..+...|+.||.+.+.+++.+...+ |+.+.++.|+.+.
T Consensus 151 ~~~~~---------------------~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vy 206 (383)
T d1gy8a_ 151 PTMGS---------------------VSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNAC 206 (383)
T ss_dssp CCC--------------------------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEE
T ss_pred ccccc---------------------ccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceee
Confidence 11000 00000011112223334489999999999998888765 7888888887766
Q ss_pred CCC
Q 017757 260 TPG 262 (366)
Q Consensus 260 T~~ 262 (366)
.+.
T Consensus 207 G~~ 209 (383)
T d1gy8a_ 207 GAH 209 (383)
T ss_dssp CCC
T ss_pred ccC
Confidence 554
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=1.2e-14 Score=134.41 Aligned_cols=176 Identities=15% Similarity=0.075 Sum_probs=115.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
|+||||||+|.||++++++|+++|++|+++++... ..+.. .... ...++.....|+.+ .+ ...+|+||
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~-~~~~--~~~~~d~~~~~~~~-----~~---~~~~d~Vi 70 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV-EHWI--GHENFELINHDVVE-----PL---YIEVDQIY 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT-GGGT--TCTTEEEEECCTTS-----CC---CCCCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH-HHhc--CCCceEEEehHHHH-----HH---HcCCCEEE
Confidence 78999999999999999999999999999987332 21111 1111 12234444444432 22 23699999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCE 196 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
|+|+...... ..++..+.+++|+.++.++++++.. . ..++|++||.+.+..+-. .+.++..
T Consensus 71 hlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~----~----~~k~I~~SS~~vy~~~~~----~~~~e~~--- 131 (312)
T d2b69a1 71 HLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKR----V----GARLLLASTSEVYGDPEV----HPQSEDY--- 131 (312)
T ss_dssp ECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHH----H----TCEEEEEEEGGGGBSCSS----SSBCTTC---
T ss_pred ECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHHH----c----CCcEEEEEChheecCCCC----CCCCccc---
Confidence 9998654321 1123456789999999999988743 2 248999999766541100 0000000
Q ss_pred ccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 197 SSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
..+..+..+...|+.||.+.+.+++..+..+ |+++..+.|+.|..|.
T Consensus 132 ----------------~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~ 178 (312)
T d2b69a1 132 ----------------WGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPR 178 (312)
T ss_dssp ----------------CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred ----------------cCCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCC
Confidence 0111122233389999999999999998875 7899999999887764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.53 E-value=1.1e-13 Score=127.93 Aligned_cols=181 Identities=14% Similarity=0.089 Sum_probs=117.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch-hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGK-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
+||||||+|.||++++++|+++|++|+++++-.. ...+....+.. ..++.++.+|++|.+++.++++.. ++|+|||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~--~~~~~~i~~Di~~~~~l~~~~~~~-~~d~Vih 78 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS--LGNFEFVHGDIRNKNDVTRLITKY-MPDSCFH 78 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc--cCCcEEEEcccCCHHHHHHHHHhc-CCceEEe
Confidence 5899999999999999999999999999875322 22222222222 357889999999999999999876 5899999
Q ss_pred cCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccccc
Q 017757 118 NQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCES 197 (366)
Q Consensus 118 nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+|+..... ...++.+..+++|+.|+.++++++... + ..+.++.||....................
T Consensus 79 ~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~----~---~~~~i~~sS~~~~~~~~~~~~~~~~~~~~---- 143 (338)
T d1orra_ 79 LAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQY----N---SNCNIIYSSTNKVYGDLEQYKYNETETRY---- 143 (338)
T ss_dssp CCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHH----C---TTCEEEEEEEGGGGTTCTTSCEEECSSCE----
T ss_pred eccccccc----ccccChHHHHHHHHHHHHHHHHhhhcc----c---ccccccccccccccccccccccccccccc----
Confidence 99875431 133456788999999999999887543 2 33555555555443221111000000000
Q ss_pred cCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhc
Q 017757 198 SGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVI 244 (366)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~ 244 (366)
.............+..+...|+.+|...+.+....+..+.
T Consensus 144 -------~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~ 183 (338)
T d1orra_ 144 -------TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG 183 (338)
T ss_dssp -------EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -------cccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence 0000011112223334455899999999999988888763
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.52 E-value=1.5e-13 Score=129.01 Aligned_cols=183 Identities=15% Similarity=0.002 Sum_probs=128.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++.+||||||+|.||.+++++|.++|++|+++++...... . .......+..+|+.+.+.+.++++ .+|++
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~-~~~~~~~~~~~D~~~~~~~~~~~~---~~d~V 83 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------T-EDMFCDEFHLVDLRVMENCLKVTE---GVDHV 83 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------C-GGGTCSEEEECCTTSHHHHHHHHT---TCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------h-hhcccCcEEEeechhHHHHHHHhh---cCCeE
Confidence 6778999999999999999999999999999987544210 0 001245678899999998888776 78999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
||+|+...... ...+.....+.+|+.++.+++.++... + ..++|++||...+....... ..+....
T Consensus 84 ih~a~~~~~~~---~~~~~~~~~~~~n~~gt~~ll~~~~~~----~---vk~~i~~SS~~~~~~~~~~~----~~~~~~~ 149 (363)
T d2c5aa1 84 FNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARIN----G---IKRFFYASSACIYPEFKQLE----TTNVSLK 149 (363)
T ss_dssp EECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHHT----T---CSEEEEEEEGGGSCGGGSSS----SSSCEEC
T ss_pred eeccccccccc---ccccccccccccccchhhHHHHhHHhh----C---cccccccccccccccccccc----ccccccc
Confidence 99998765421 123345667889999999998887543 2 45899999987665221100 0000000
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
. .+..+..+...|+.||.+.+.+++.+..++ |+++..+.|+.+..+.
T Consensus 150 ~-----------------~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~ 196 (363)
T d2c5aa1 150 E-----------------SDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF 196 (363)
T ss_dssp G-----------------GGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred c-----------------ccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccC
Confidence 0 011122223389999999999998888775 7899999998887653
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.48 E-value=1.8e-13 Score=119.73 Aligned_cols=203 Identities=16% Similarity=0.135 Sum_probs=127.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCe--EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGAR--VSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~--V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
-++||||||+|.||++++++|+++|++ |+...|++++.+.. ..++..+.+|+++.+++.++++ .+|.
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~---~~d~ 71 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------GGEADVFIGDITDADSINPAFQ---GIDA 71 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------TCCTTEEECCTTSHHHHHHHHT---TCSE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--------cCCcEEEEeeeccccccccccc---ccee
Confidence 379999999999999999999999976 55667877654322 3467789999999999999887 6899
Q ss_pred EEEcCCCCCCCC---------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccC
Q 017757 115 LVVNQGVFVPGE---------LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTN 185 (366)
Q Consensus 115 vi~nAG~~~~~~---------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~ 185 (366)
+||+|+...... ..............+|+.++..++....... .+...+.++.....
T Consensus 72 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~s~~~~~~------- 137 (252)
T d2q46a1 72 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-------VKHIVVVGSMGGTN------- 137 (252)
T ss_dssp EEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-------CSEEEEEEETTTTC-------
T ss_pred eEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-------ccccccccccccCC-------
Confidence 999998643211 1111223345567788888887776654332 45677777655432
Q ss_pred ccCccccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhh
Q 017757 186 MKGINENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEE 265 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~ 265 (366)
+..... . .+...+.........+.. ..|+++..+.||.+..+....
T Consensus 138 ---------------~~~~~~------------~----~~~~~~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~ 183 (252)
T d2q46a1 138 ---------------PDHPLN------------K----LGNGNILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKEGGV 183 (252)
T ss_dssp ---------------TTCGGG------------G----GGGCCHHHHHHHHHHHHH---HSSSCEEEEEECEEECSCTTS
T ss_pred ---------------CCcccc------------c----ccccchhhhhhhhhhhhh---cccccceeecceEEECCCcch
Confidence 111111 0 122222222223333333 358999999999887764332
Q ss_pred hhhcCCcchhhhhccCCCCCHHHHHHHHHhhhh
Q 017757 266 ENKRRPRLTSIIAASSGAMKADEVAKKALDGIK 298 (366)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~ 298 (366)
..................++.+++|+.++..+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~ 216 (252)
T d2q46a1 184 RELLVGKDDELLQTDTKTVPRADVAEVCIQALL 216 (252)
T ss_dssp SCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTT
T ss_pred hhhhhccCcccccCCCCeEEHHHHHHHHHHHhC
Confidence 111111111222333456788999998887764
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=7.3e-14 Score=123.53 Aligned_cols=160 Identities=17% Similarity=0.166 Sum_probs=114.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
++.|++|++|||||||.||++++++|.++|. +|++++|++..... .....+....+|+.+.+++. +.+
T Consensus 9 ~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------~~~~~i~~~~~D~~~~~~~~---~~~ 78 (232)
T d2bkaa1 9 DFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------EAYKNVNQEVVDFEKLDDYA---SAF 78 (232)
T ss_dssp HHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------GGGGGCEEEECCGGGGGGGG---GGG
T ss_pred HhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------cccceeeeeeeccccccccc---ccc
Confidence 3568899999999999999999999999995 79999997654221 11235666677777765544 444
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCc
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGI 189 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~ 189 (366)
...|++||++|... .........++|+.++..+++.+. +.+ ..++|++||.....
T Consensus 79 ~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~----~~~---v~~fi~~Ss~~~~~----------- 133 (232)
T d2bkaa1 79 QGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAK----AGG---CKHFNLLSSKGADK----------- 133 (232)
T ss_dssp SSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHH----HTT---CCEEEEECCTTCCT-----------
T ss_pred cccccccccccccc-------cccchhhhhhhcccccceeeeccc----ccC---ccccccCCcccccc-----------
Confidence 57999999998531 334456677889999998888774 222 56899999976532
Q ss_pred cccccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCc-EEEEEcCCCCCCCCh
Q 017757 190 NENKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDI-HVSLIFPPDTETPGL 263 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI-~Vn~V~PG~v~T~~~ 263 (366)
.... .|+.+|...+...+. .+. ++..+.||.+..+..
T Consensus 134 -------------~~~~-----------------~Y~~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~ 171 (232)
T d2bkaa1 134 -------------SSNF-----------------LYLQVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQ 171 (232)
T ss_dssp -------------TCSS-----------------HHHHHHHHHHHHHHT-------TCCSEEEEEECCEEECTTG
T ss_pred -------------Cccc-----------------hhHHHHHHhhhcccc-------ccccceEEecCceeecCCC
Confidence 1223 699999976654322 233 477789999987743
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.46 E-value=1.8e-13 Score=126.54 Aligned_cols=177 Identities=16% Similarity=0.127 Sum_probs=122.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEE------EecCchhHHHHHHHHH-hhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSI------LARSGKKLEEAKQSIQ-LATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l------~~r~~~~~~~~~~~l~-~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+||||||+|.||++++++|+++|++|.. .+........ ..+. .....++.++.+|+++......... .
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~ 76 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVDADPRLRFVHGDIRDAGLLARELR---G 76 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGTTCTTEEEEECCTTCHHHHHHHTT---T
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhhcCCCeEEEEeccccchhhhcccc---c
Confidence 5899999999999999999999986543 3322111000 0011 1114578999999999998876655 7
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
+|.++|+|+..... ...+.....+++|+.++.++++++... + ..++|++||...+..+
T Consensus 77 ~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~----~---~~~~I~~Ss~~~yg~~----------- 134 (322)
T d1r6da_ 77 VDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDA----G---VGRVVHVSTNQVYGSI----------- 134 (322)
T ss_dssp CCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHT----T---CCEEEEEEEGGGGCCC-----------
T ss_pred cceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHHHHc----C---CceEEEeecceeecCC-----------
Confidence 89999999865332 234455667899999999999988532 2 4589999998766411
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
... +..+..+..+...|+.||.+.+.+++.+++++ |+++..+.|+.+..|.
T Consensus 135 -----------~~~------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~ 185 (322)
T d1r6da_ 135 -----------DSG------SWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPY 185 (322)
T ss_dssp -----------SSS------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred -----------CCC------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcC
Confidence 000 01111222233389999999999999998875 7889889888887664
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.22 E-value=8.2e-11 Score=105.46 Aligned_cols=193 Identities=13% Similarity=0.088 Sum_probs=120.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++|||||+|.||.+++++|.++|++|+.++|+. +|++|.++++++++.. .+|+|||+
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~-~~d~vih~ 59 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEK-KPNVVINC 59 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccCCCHHHHHHHHHHc-CCCEEEee
Confidence 489999999999999999999999999998853 4899999999999876 68999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCcccccccccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLCESS 198 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (366)
|+..... ......+..++.|+.....+...+... ...+++.||......+.
T Consensus 60 a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~~--------~~~~~~~ss~~v~~~~~----------------- 110 (281)
T d1vl0a_ 60 AAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAYSV--------GAEIVQISTDYVFDGEA----------------- 110 (281)
T ss_dssp CCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHH--------TCEEEEEEEGGGSCSCC-----------------
T ss_pred ccccccc----cccccchhhcccccccccccccccccc--------cccccccccceeeeccc-----------------
Confidence 9865432 123344566777887777766655332 24666666654432000
Q ss_pred CCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCChhhhhh------cCCc
Q 017757 199 GKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPGLEEENK------RRPR 272 (366)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~~~~~~~------~~~~ 272 (366)
.. +..+..+..+...|+.+|.+.+.+.+. .+.+...+.|+.+..+....... ....
T Consensus 111 -----~~------~~~e~~~~~~~~~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~ 172 (281)
T d1vl0a_ 111 -----KE------PITEFDEVNPQSAYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDE 172 (281)
T ss_dssp -----SS------CBCTTSCCCCCSHHHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCHHHHHHHHHHHCSE
T ss_pred -----cc------cccccccccchhhhhhhhhHHHHHHHH-------hCCCccccceeEEeCCCcccccchhhhhccCCc
Confidence 00 001111122233799999876655432 24567778888886654221100 0111
Q ss_pred chhhhhccCCCCCHHHHHHHHHhhhhCCC
Q 017757 273 LTSIIAASSGAMKADEVAKKALDGIKSGS 301 (366)
Q Consensus 273 ~~~~~~~~~~~~~~~~~a~~~~~~i~~gr 301 (366)
..............+++++.+...+....
T Consensus 173 ~~~~~~~~~~~i~v~D~~~~~~~~~~~~~ 201 (281)
T d1vl0a_ 173 LKVVHDQVGTPTSTVDLARVVLKVIDEKN 201 (281)
T ss_dssp EEEESSCEECCEEHHHHHHHHHHHHHHTC
T ss_pred eeecCCceeccchhhhhhhhhhhhhhhcc
Confidence 10011111234577888888777775554
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.16 E-value=2.2e-11 Score=105.42 Aligned_cols=148 Identities=16% Similarity=0.150 Sum_probs=99.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-CCCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVD 113 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~-~~id 113 (366)
.|++|||||||.||++++++|.++|+ +|+...|++... ..+ +..+..|..++ .+.. ..+|
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----------~~~---~~~~~~d~~~~---~~~~~~~~d 64 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----------HPR---LDNPVGPLAEL---LPQLDGSID 64 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----------CTT---EECCBSCHHHH---GGGCCSCCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----------ccc---ccccccchhhh---hhccccchh
Confidence 48999999999999999999999997 577767654320 112 23455554443 3332 5689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENK 193 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~ 193 (366)
.+|+++|.... ....-+...++|+.++..+++.+. +.+ ..+++++||..+..
T Consensus 65 ~vi~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~a~----~~~---v~~~i~~Ss~~~~~--------------- 116 (212)
T d2a35a1 65 TAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRAL----EMG---ARHYLVVSALGADA--------------- 116 (212)
T ss_dssp EEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHH----HTT---CCEEEEECCTTCCT---------------
T ss_pred eeeeeeeeecc------ccccccccccchhhhhhhcccccc----ccc---cccccccccccccc---------------
Confidence 99999986422 111235678889999988888763 332 56899999976532
Q ss_pred cccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCc-EEEEEcCCCCCCCC
Q 017757 194 LCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDI-HVSLIFPPDTETPG 262 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI-~Vn~V~PG~v~T~~ 262 (366)
.... .|..+|...+...+ + .+. +...+.|+.+..+.
T Consensus 117 ---------~~~~-----------------~y~~~K~~~E~~l~----~---~~~~~~~I~Rp~~v~G~~ 153 (212)
T d2a35a1 117 ---------KSSI-----------------FYNRVKGELEQALQ----E---QGWPQLTIARPSLLFGPR 153 (212)
T ss_dssp ---------TCSS-----------------HHHHHHHHHHHHHT----T---SCCSEEEEEECCSEESTT
T ss_pred ---------cccc-----------------chhHHHHHHhhhcc----c---cccccceeeCCcceeCCc
Confidence 1223 69999986654332 2 233 57788999997664
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.14 E-value=3.7e-11 Score=108.42 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=80.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
++|||||+|-||.+++++|.++|..| .++++... +..|++|.+.++++++.. ++|+|||+
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~-~~D~Vih~ 61 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------------FCGDFSNPKGVAETVRKL-RPDVIVNA 61 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------------SCCCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------------ccCcCCCHHHHHHHHHHc-CCCEEEEe
Confidence 48999999999999999999998644 44444321 346999999999999876 58999999
Q ss_pred CCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 119 QGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 119 AG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
||...... +.+.-+..+++|+.++..+.+++. +. ..+++++||...+.
T Consensus 62 Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~----~~~~~~~ss~~~~~ 109 (298)
T d1n2sa_ 62 AAHTAVDK----AESEPELAQLLNATSVEAIAKAAN----ET----GAWVVHYSTDYVFP 109 (298)
T ss_dssp CCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHT----TT----TCEEEEEEEGGGSC
T ss_pred cccccccc----cccCccccccccccccccchhhhh----cc----cccccccccccccc
Confidence 99764322 122335678899999999888873 21 35788887765443
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=98.95 E-value=2.1e-09 Score=97.02 Aligned_cols=82 Identities=21% Similarity=0.221 Sum_probs=63.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHH-HHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEE-AKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~-~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
++||||||+|.||++++++|.++|++|+++.|+...... ..+.+.......+..+.+|++|.+++.+.++ ..+.++
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~---~~~~~~ 80 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK---QVDVVI 80 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT---TCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc---Ccchhh
Confidence 459999999999999999999999999999997543211 1122222234578889999999999988887 678999
Q ss_pred EcCCCC
Q 017757 117 VNQGVF 122 (366)
Q Consensus 117 ~nAG~~ 122 (366)
++++..
T Consensus 81 ~~~~~~ 86 (312)
T d1qyda_ 81 SALAGG 86 (312)
T ss_dssp ECCCCS
T ss_pred hhhhhc
Confidence 988753
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.90 E-value=3e-13 Score=115.12 Aligned_cols=48 Identities=25% Similarity=0.375 Sum_probs=43.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG 86 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~ 86 (366)
++.|+||+|++|+++|+.|+++|++|++.+|++++++++.+++.....
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~ 49 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG 49 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence 367888889999999999999999999999999999999999876643
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=98.89 E-value=1.1e-08 Score=91.54 Aligned_cols=84 Identities=18% Similarity=0.275 Sum_probs=66.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH--HHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE--EAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~--~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+.|+||||||+|.||++++++|.++|++|++++|+..... +....+.......+..+.+|+.+.+...+.++ ..+
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~ 78 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK---NVD 78 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH---TCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh---hce
Confidence 3578999999999999999999999999999999765422 12223333335567889999999999888887 679
Q ss_pred EEEEcCCCC
Q 017757 114 VLVVNQGVF 122 (366)
Q Consensus 114 ~vi~nAG~~ 122 (366)
.++++++..
T Consensus 79 ~vi~~~~~~ 87 (307)
T d1qyca_ 79 VVISTVGSL 87 (307)
T ss_dssp EEEECCCGG
T ss_pred eeeeccccc
Confidence 999998753
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=4.3e-09 Score=94.74 Aligned_cols=169 Identities=15% Similarity=0.115 Sum_probs=99.6
Q ss_pred EEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHH-HHHH--hcCCCcEE
Q 017757 40 VFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVK-TALD--EAGPVDVL 115 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~-~~~~--~~~~id~v 115 (366)
||||||+|.||.+++++|+++|+ +|+++++-.... +..... .. ..+|..+.+... .... .+..++++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVNLV----DL----NIADYMDKEDFLIQIMAGEEFGDVEAI 72 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHHHH----TS----CCSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhccc----cc----chhhhccchHHHHHHhhhhcccchhhh
Confidence 79999999999999999999996 588876422211 111111 11 123334444433 3332 24678999
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccccccc
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINENKLC 195 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
+|.|+...... ...+...+.|+.+...+++++... . .++++.||......+.....
T Consensus 73 ~~~aa~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~----~----i~~v~~ss~~~~~~~~~~~~---------- 128 (307)
T d1eq2a_ 73 FHEGACSSTTE------WDGKYMMDNNYQYSKELLHYCLER----E----IPFLYASSAATYGGRTSDFI---------- 128 (307)
T ss_dssp EECCSCCCTTC------CCHHHHHHHTHHHHHHHHHHHHHH----T----CCEEEEEEGGGGTTCCSCBC----------
T ss_pred hhhcccccccc------cccccccccccccccccccccccc----c----cccccccccccccccccccc----------
Confidence 99998543321 123446677888888777766433 2 24555555554431111000
Q ss_pred cccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcCCCCCCCC
Q 017757 196 ESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFPPDTETPG 262 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~PG~v~T~~ 262 (366)
....+..+...|+.+|.+.+.+++.++.++ ++.+..+.|..+..|.
T Consensus 129 ------------------~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~r~~~vyGp~ 174 (307)
T d1eq2a_ 129 ------------------ESREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPR 174 (307)
T ss_dssp ------------------SSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSS
T ss_pred ------------------ccccccccccccccccchhhhhcccccccc---ccccccccceeEeecc
Confidence 001112233389999999999888887664 6777777777766653
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.75 E-value=1.3e-07 Score=87.34 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHH-HHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA-VKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~-v~~~~~~~~~id~ 114 (366)
+.|+|+||||||.||.+++++|+++|++|+++.|+.++... ..+.. ...+..+++|++|..+ ++.++. ..|.
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~--~~~v~~~~gD~~d~~~~~~~a~~---~~~~ 74 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA--IPNVTLFQGPLLNNVPLMDTLFE---GAHL 74 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT--STTEEEEESCCTTCHHHHHHHHT---TCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc--cCCCEEEEeeCCCcHHHHHHHhc---CCce
Confidence 57899999999999999999999999999999998776432 22221 3468889999999655 455554 6788
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
++.+..
T Consensus 75 ~~~~~~ 80 (350)
T d1xgka_ 75 AFINTT 80 (350)
T ss_dssp EEECCC
T ss_pred EEeecc
Confidence 877754
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.02 E-value=3e-05 Score=64.44 Aligned_cols=87 Identities=23% Similarity=0.312 Sum_probs=67.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHhc
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
..++++|+++|.|+ ||.|++++..|.+.|. +++++.|+.++.+++.+..++.. .........|+.+.+++.+...
T Consensus 13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 89 (182)
T d1vi2a1 13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-- 89 (182)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--
Confidence 35789999999997 7999999999999998 58899999887776554332211 1234456789999988877776
Q ss_pred CCCcEEEEcCCCC
Q 017757 110 GPVDVLVVNQGVF 122 (366)
Q Consensus 110 ~~id~vi~nAG~~ 122 (366)
..|++||+....
T Consensus 90 -~~diiIN~Tp~G 101 (182)
T d1vi2a1 90 -SADILTNGTKVG 101 (182)
T ss_dssp -TCSEEEECSSTT
T ss_pred -ccceeccccCCc
Confidence 689999997653
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.98 E-value=3e-05 Score=63.83 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=56.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
+|.++||+||+|++|...++.....|++|+++++++++.+.+. ++ |..- ..|-++.+-.+++.+.. ..+|
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~----Ga~~---vi~~~~~~~~~~i~~~t~~~g~d 99 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QN----GAHE---VFNHREVNYIDKIKKYVGEKGID 99 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT----TCSE---EEETTSTTHHHHHHHHHCTTCEE
T ss_pred CCCEEEEEeccccccccccccccccCccccccccccccccccc-cc----Cccc---ccccccccHHHHhhhhhccCCce
Confidence 6889999999999999999999889999999998876654432 22 3322 23666665555554443 4689
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++.+.|
T Consensus 100 ~v~d~~g 106 (174)
T d1yb5a2 100 IIIEMLA 106 (174)
T ss_dssp EEEESCH
T ss_pred EEeeccc
Confidence 9999886
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.94 E-value=1.9e-05 Score=64.67 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.+|+++|.|| |.+|+.+|+.|+++|++|++++|+.+++++..+.+. .......+..+.......+. ..|.+
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~-----~~~~~~~~~~~~~~~~~~i~---~~~~~ 71 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-----HSTPISLDVNDDAALDAEVA---KHDLV 71 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT-----TEEEEECCTTCHHHHHHHHT---TSSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc-----ccccccccccchhhhHhhhh---cccee
Confidence 3689999987 999999999999999999999999998887765432 34455567777777777776 56777
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
+....
T Consensus 72 i~~~~ 76 (182)
T d1e5qa1 72 ISLIP 76 (182)
T ss_dssp EECSC
T ss_pred Eeecc
Confidence 76543
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.87 E-value=5e-05 Score=61.70 Aligned_cols=75 Identities=21% Similarity=0.325 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++++++|.|+ |++|+.+++.|..+|+ ++.++.|+.++.++..+++. .++ .+.+++.+.+. ..
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~----~~~-------~~~~~~~~~l~---~~ 85 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG----GEA-------VRFDELVDHLA---RS 85 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT----CEE-------CCGGGHHHHHH---TC
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh----ccc-------ccchhHHHHhc---cC
Confidence 589999999997 9999999999999998 59999999888877776653 222 12334445555 68
Q ss_pred cEEEEcCCCCC
Q 017757 113 DVLVVNQGVFV 123 (366)
Q Consensus 113 d~vi~nAG~~~ 123 (366)
|++|++.+...
T Consensus 86 Divi~atss~~ 96 (159)
T d1gpja2 86 DVVVSATAAPH 96 (159)
T ss_dssp SEEEECCSSSS
T ss_pred CEEEEecCCCC
Confidence 99999988543
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.75 E-value=5e-05 Score=62.90 Aligned_cols=103 Identities=20% Similarity=0.296 Sum_probs=70.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~id 113 (366)
+|.++||+||+|++|.+.+.-....|++|+.+.+++++.+.+.+ . +.+..+ |-++++..+...+. .+.+|
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~-Ga~~vi---~~~~~~~~~~~~~~~~~~Gvd 100 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----I-GFDAAF---NYKTVNSLEEALKKASPDGYD 100 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T-TCSEEE---ETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----h-hhhhhc---ccccccHHHHHHHHhhcCCCc
Confidence 69999999999999999999999999999999998876544332 2 333333 33343333333333 24699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~ 177 (366)
+++.+.|. . ..+..++.+++ .|+++.++...+.
T Consensus 101 ~v~D~vG~------------------------~--~~~~~~~~l~~-----~G~~v~~G~~~~~ 133 (182)
T d1v3va2 101 CYFDNVGG------------------------E--FLNTVLSQMKD-----FGKIAICGAISVY 133 (182)
T ss_dssp EEEESSCH------------------------H--HHHHHGGGEEE-----EEEEEECCCGGGT
T ss_pred eeEEecCc------------------------h--hhhhhhhhccC-----CCeEEeecceeec
Confidence 99999972 1 12344555555 5799988765543
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.68 E-value=0.00011 Score=60.29 Aligned_cols=80 Identities=15% Similarity=0.139 Sum_probs=61.0
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
...++||+++|.|+ ||.+++++..|.+.+.+|+++.|+.+++++..+.+... ..+.....|-. ....
T Consensus 13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~--~~~~~~~~~~~----------~~~~ 79 (171)
T d1p77a1 13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--GNIQAVSMDSI----------PLQT 79 (171)
T ss_dssp TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--SCEEEEEGGGC----------CCSC
T ss_pred CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc--cccchhhhccc----------cccc
Confidence 35789999999985 88899999999998899999999999999988887643 24445554422 1347
Q ss_pred CcEEEEcCCCCCC
Q 017757 112 VDVLVVNQGVFVP 124 (366)
Q Consensus 112 id~vi~nAG~~~~ 124 (366)
.|++||+......
T Consensus 80 ~diiIN~tp~g~~ 92 (171)
T d1p77a1 80 YDLVINATSAGLS 92 (171)
T ss_dssp CSEEEECCCC---
T ss_pred cceeeeccccccc
Confidence 8999999876543
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.62 E-value=6.5e-05 Score=61.60 Aligned_cols=78 Identities=14% Similarity=0.184 Sum_probs=59.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
..+++||.++|.|+ ||-+++++..|.+.|.+|.++.|+.++.+++.+.+.... .+.....| +. ....
T Consensus 13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~--~~~~~~~~--~~--------~~~~ 79 (170)
T d1nyta1 13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQALSMD--EL--------EGHE 79 (170)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEEECCSG--GG--------TTCC
T ss_pred CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc--cccccccc--cc--------cccc
Confidence 45789999999996 889999999999999999999999999998888776542 23322222 11 1246
Q ss_pred CcEEEEcCCCC
Q 017757 112 VDVLVVNQGVF 122 (366)
Q Consensus 112 id~vi~nAG~~ 122 (366)
.|++||+....
T Consensus 80 ~dliIN~Tp~G 90 (170)
T d1nyta1 80 FDLIINATSSG 90 (170)
T ss_dssp CSEEEECCSCG
T ss_pred cceeecccccC
Confidence 89999997543
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.60 E-value=0.00037 Score=56.61 Aligned_cols=80 Identities=25% Similarity=0.276 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeE-EEEEecCCCHHHHHHHHHh-c-CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEV-ATYSADVRDFDAVKTALDE-A-GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v-~~~~~Dls~~~~v~~~~~~-~-~~i 112 (366)
.|.+++|+| +|++|...+..+...|++|+++++++++++.+.+ + +... ....-.-.+.+++.+.+.+ . +.+
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~----ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 99 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C----GADVTLVVDPAKEEESSIIERIRSAIGDLP 99 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T----TCSEEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c----CCcEEEeccccccccchhhhhhhcccccCC
Confidence 577999997 6899999999998899999999999988765433 2 3232 2222223344555555544 3 479
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|++|.++|.
T Consensus 100 D~vid~~g~ 108 (170)
T d1e3ja2 100 NVTIDCSGN 108 (170)
T ss_dssp SEEEECSCC
T ss_pred ceeeecCCC
Confidence 999999983
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.50 E-value=0.00013 Score=56.91 Aligned_cols=73 Identities=16% Similarity=0.301 Sum_probs=58.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
.++|.|+ |.+|+.+++.|.++|++|++++++++..+++.+++ .+..+..|.+|++.++++- ....|.++..
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~------~~~vi~Gd~~~~~~l~~~~--i~~a~~vv~~ 72 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDAG--IEDADMYIAV 72 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHTT--TTTCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh------hhhhccCcccchhhhhhcC--hhhhhhhccc
Confidence 5789997 99999999999999999999999998877665432 3457889999999887762 2357888776
Q ss_pred CC
Q 017757 119 QG 120 (366)
Q Consensus 119 AG 120 (366)
..
T Consensus 73 t~ 74 (132)
T d1lssa_ 73 TG 74 (132)
T ss_dssp CS
T ss_pred CC
Confidence 43
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.50 E-value=0.00011 Score=60.28 Aligned_cols=74 Identities=24% Similarity=0.311 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+|++++|+||+|++|...+..+...|++|+.+++++++.+.+.+ + |.+.. .|..+ ..+.....+++|++
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-l----Ga~~~---i~~~~---~~~~~~~~~g~D~v 95 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L----GAEEA---ATYAE---VPERAKAWGGLDLV 95 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T----TCSEE---EEGGG---HHHHHHHTTSEEEE
T ss_pred CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-c----cccee---eehhh---hhhhhhcccccccc
Confidence 78999999999999999999888899999999998877665432 2 33222 23332 22233345679999
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
+.+.|
T Consensus 96 ~d~~G 100 (171)
T d1iz0a2 96 LEVRG 100 (171)
T ss_dssp EECSC
T ss_pred ccccc
Confidence 99877
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.47 E-value=0.00017 Score=59.12 Aligned_cols=78 Identities=21% Similarity=0.237 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~id 113 (366)
.|++++|+||+|++|...+.-....|++|+.+++++++.+.+.+ + |.+. ..|-++++-.+++.+. -..+|
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l----Ga~~---vi~~~~~d~~~~v~~~t~g~g~d 99 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A----GAWQ---VINYREEDLVERLKEITGGKKVR 99 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H----TCSE---EEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c----CCeE---EEECCCCCHHHHHHHHhCCCCeE
Confidence 48899999999999999999998999999999999888765432 2 3332 2366665545554443 24689
Q ss_pred EEEEcCCC
Q 017757 114 VLVVNQGV 121 (366)
Q Consensus 114 ~vi~nAG~ 121 (366)
+++.+.|.
T Consensus 100 ~v~d~~g~ 107 (179)
T d1qora2 100 VVYDSVGR 107 (179)
T ss_dssp EEEECSCG
T ss_pred EEEeCccH
Confidence 99999873
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.41 E-value=0.00037 Score=57.39 Aligned_cols=79 Identities=24% Similarity=0.323 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHH-HHHHHhc--CC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAV-KTALDEA--GP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v-~~~~~~~--~~ 111 (366)
.|.+++|+|+ |++|...+..+...|+ +|+++++++++++.+ +++ |..... ...-.+..+. +++.+.. ..
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l----Ga~~vi-~~~~~~~~~~~~~i~~~~~~~g 100 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI----GADLTL-NRRETSVEERRKAIMDITHGRG 100 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT----TCSEEE-ETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc----cceEEE-eccccchHHHHHHHHHhhCCCC
Confidence 5899999997 8999999999999998 799999999887644 333 333222 2111233333 3333332 36
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.+.|.
T Consensus 101 ~Dvvid~vG~ 110 (182)
T d1vj0a2 101 ADFILEATGD 110 (182)
T ss_dssp EEEEEECSSC
T ss_pred ceEEeecCCc
Confidence 8999999984
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.40 E-value=0.00056 Score=56.68 Aligned_cols=84 Identities=18% Similarity=0.233 Sum_probs=56.8
Q ss_pred CCEEE-EEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEE-ecCCC-HHHHHHHHHh-cCCC
Q 017757 37 DRHVF-ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYS-ADVRD-FDAVKTALDE-AGPV 112 (366)
Q Consensus 37 gk~vL-ITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~-~Dls~-~~~v~~~~~~-~~~i 112 (366)
|.+++ ++||+|++|.+.+.-....|++|+.+.|+.+..++..+.+++.....+.... .|..+ .+.+.++.+. -+++
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~v 108 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEA 108 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCc
Confidence 55445 5799999999998888888999999999888877777777665444443221 12222 1223444433 3579
Q ss_pred cEEEEcCC
Q 017757 113 DVLVVNQG 120 (366)
Q Consensus 113 d~vi~nAG 120 (366)
|+++.+.|
T Consensus 109 dvv~D~vg 116 (189)
T d1gu7a2 109 KLALNCVG 116 (189)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999886
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.39 E-value=0.0014 Score=51.89 Aligned_cols=115 Identities=12% Similarity=0.212 Sum_probs=69.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhh--cCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLA--TGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~--~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+++++.|.|+ |.+|..+|..|+.+| .+|+++|+++++.+....++... ..........|. ++...
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~----------~~~~~ 72 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY----------SDCKD 72 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG----------GGGTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH----------HHhcc
Confidence 3557888896 999999999999998 57999999988776555555431 122333444443 23446
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
.|++|.+||..... .++-.+.+..|. -+.+...+.+.+... .+.++++|.
T Consensus 73 adivvitag~~~~~------g~~r~~l~~~N~----~i~~~~~~~i~~~~p--~aivivvtN 122 (146)
T d1ez4a1 73 ADLVVITAGAPQKP------GESRLDLVNKNL----NILSSIVKPVVDSGF--DGIFLVAAN 122 (146)
T ss_dssp CSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTC--CSEEEECSS
T ss_pred ccEEEEecccccCC------CCCHHHHHHHHH----HHHHHHHHHHhhcCC--CcEEEEeCC
Confidence 89999999964321 122233445554 455556666565442 345555554
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.38 E-value=0.00015 Score=59.71 Aligned_cols=77 Identities=29% Similarity=0.341 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id 113 (366)
+|+++||+||+|++|...+..+...|++|+++.+++++.+.+. + .+.+.. .|-.+++-.+++.+.. .++|
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~----~-~Ga~~v---i~~~~~~~~~~v~~~t~~~g~d 96 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----R-LGVEYV---GDSRSVDFADEILELTDGYGVD 96 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----T-TCCSEE---EETTCSTHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeecccccccccc----c-cccccc---ccCCccCHHHHHHHHhCCCCEE
Confidence 5899999999999999999988889999999999876654332 2 243322 3445554445554443 4699
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++.+.|
T Consensus 97 ~v~d~~g 103 (183)
T d1pqwa_ 97 VVLNSLA 103 (183)
T ss_dssp EEEECCC
T ss_pred EEEeccc
Confidence 9999997
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.38 E-value=0.0015 Score=53.01 Aligned_cols=79 Identities=20% Similarity=0.300 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-c-CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-A-GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~-~~i 112 (366)
.|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+. ++ |.+. .+..+-.+.....+.++. . ..+
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~----Ga~~-~~~~~~~~~~~~~~~~~~~~g~g~ 98 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI----GADL-VLQISKESPQEIARKVEGQLGCKP 98 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT----TCSE-EEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh----CCcc-cccccccccccccccccccCCCCc
Confidence 4778999986 9999999999999999 6999999988876543 33 3333 233344555555555443 3 479
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|++|.+.|.
T Consensus 99 Dvvid~~G~ 107 (171)
T d1pl8a2 99 EVTIECTGA 107 (171)
T ss_dssp SEEEECSCC
T ss_pred eEEEeccCC
Confidence 999999983
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.00023 Score=50.19 Aligned_cols=42 Identities=24% Similarity=0.321 Sum_probs=37.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA 77 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~ 77 (366)
++.+++|+||+||+|......+...|++|+.+.+++++.+.+
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~ 72 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 688999999999999999998888899999999998876654
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.19 E-value=0.00032 Score=54.60 Aligned_cols=72 Identities=11% Similarity=0.193 Sum_probs=56.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH-HHhcCCCcEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTA-LDEAGPVDVLV 116 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~-~~~~~~id~vi 116 (366)
|.++|.|+ |-+|+.+|+.|.++|.+|++++.+++..+++.+ . + ...+..|.++++.++++ ++ ..|.+|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~----~-~--~~~~~gd~~~~~~l~~a~i~---~a~~vi 69 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y-A--THAVIANATEENELLSLGIR---NFEYVI 69 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT----T-C--SEEEECCTTCTTHHHHHTGG---GCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH----h-C--CcceeeecccchhhhccCCc---cccEEE
Confidence 56788876 899999999999999999999999987766532 1 2 34567899999988776 33 578887
Q ss_pred EcCC
Q 017757 117 VNQG 120 (366)
Q Consensus 117 ~nAG 120 (366)
...+
T Consensus 70 ~~~~ 73 (134)
T d2hmva1 70 VAIG 73 (134)
T ss_dssp ECCC
T ss_pred EEcC
Confidence 7765
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.16 E-value=0.00035 Score=57.47 Aligned_cols=103 Identities=16% Similarity=0.179 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPV 112 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~i 112 (366)
-+|.++||+||+||+|...+.-....|++|+.+.+++++.+.+.+ + +.+... |-++ . ..+..+. -+++
T Consensus 30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l----Ga~~vi---~~~~-~-~~~~~~~~~~~gv 99 (176)
T d1xa0a2 30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L----GAKEVL---ARED-V-MAERIRPLDKQRW 99 (176)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T----TCSEEE---ECC-----------CCSCCE
T ss_pred CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c----ccceee---ecch-h-HHHHHHHhhccCc
Confidence 368999999999999999998888899999999999888665432 2 333222 2121 1 1222233 2589
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCcccc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQC 178 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~ 178 (366)
|+++.+.|.. + ....++.++. .|+++.+++..+..
T Consensus 100 D~vid~vgg~--------~------------------~~~~l~~l~~-----~Griv~~G~~~g~~ 134 (176)
T d1xa0a2 100 AAAVDPVGGR--------T------------------LATVLSRMRY-----GGAVAVSGLTGGAE 134 (176)
T ss_dssp EEEEECSTTT--------T------------------HHHHHHTEEE-----EEEEEECSCCSSSC
T ss_pred CEEEEcCCch--------h------------------HHHHHHHhCC-----CceEEEeecccCcc
Confidence 9999999842 1 1234555555 58999999976643
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.10 E-value=0.00078 Score=57.46 Aligned_cols=79 Identities=24% Similarity=0.287 Sum_probs=57.2
Q ss_pred cCCCCCEEEEEcC----------------CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecC
Q 017757 33 IPIKDRHVFITGG----------------SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADV 96 (366)
Q Consensus 33 ~~l~gk~vLITGa----------------s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dl 96 (366)
.+|+|+++|||+| ||..|.++|+++..+|++|+++.-.... ..+..+.. ..+
T Consensus 2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~~p~~~~~--~~~ 69 (223)
T d1u7za_ 2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------PTPPFVKR--VDV 69 (223)
T ss_dssp CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------CCCTTEEE--EEC
T ss_pred cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------Cccccccc--cee
Confidence 4789999999977 4589999999999999999988664431 01223333 345
Q ss_pred CCHHHHHHHH-HhcCCCcEEEEcCCCCC
Q 017757 97 RDFDAVKTAL-DEAGPVDVLVVNQGVFV 123 (366)
Q Consensus 97 s~~~~v~~~~-~~~~~id~vi~nAG~~~ 123 (366)
...++..+.+ +.+...|++|++|.+.-
T Consensus 70 ~t~~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 70 MTALEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp CSHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred hhhHHHHHHHHhhhccceeEeeeechhh
Confidence 5666665555 44567899999999764
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.10 E-value=0.00097 Score=53.97 Aligned_cols=78 Identities=14% Similarity=0.193 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|.+++|+|++|++|..++..+...|. +|+++++++++.+.+.+ + |.+. ..|-++++..++..+.. +.+
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~----Ga~~---~i~~~~~~~~~~~~~~~~~~~~ 98 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A----GADY---VINASMQDPLAEIRRITESKGV 98 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H----TCSE---EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c----CCce---eeccCCcCHHHHHHHHhhcccc
Confidence 578999999999999999999998885 79999999877655432 2 3332 23445555555555543 468
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|+++.++|.
T Consensus 99 d~vid~~g~ 107 (170)
T d1jvba2 99 DAVIDLNNS 107 (170)
T ss_dssp EEEEESCCC
T ss_pred hhhhccccc
Confidence 999999983
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.03 E-value=0.0071 Score=47.77 Aligned_cols=117 Identities=11% Similarity=0.167 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHHHHhc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
-.++++.|+|+ |.+|..+|..|+.+|. +++++|+++++++....++.... ...+.....|. +..
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----------~~l 72 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----------DDC 72 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----------GGT
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH----------HHh
Confidence 35678889997 9999999999999874 79999999988776666665421 23344444332 223
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
..-|++|.+||...... + +. .+.+..| .-+.+.+.+.+.+... .+.++++|--
T Consensus 73 ~daDvvvitag~~~~~~--~-~R---~dl~~~N----~~i~~~i~~~i~~~~p--~a~~ivvtNP 125 (148)
T d1ldna1 73 RDADLVVICAGANQKPG--E-TR---LDLVDKN----IAIFRSIVESVMASGF--QGLFLVATNP 125 (148)
T ss_dssp TTCSEEEECCSCCCCTT--T-CS---GGGHHHH----HHHHHHHHHHHHHHTC--CSEEEECSSS
T ss_pred ccceeEEEecccccccC--c-ch---hHHHHHH----HHHHHHHHHHHHhhCC--CceEEEecCc
Confidence 46899999999754321 1 11 1223344 3445555665555432 4567776653
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.02 E-value=0.001 Score=54.42 Aligned_cols=77 Identities=19% Similarity=0.170 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
+|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+. ++ |... ..|..+++..+++.+.. ..+
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l----Ga~~---~i~~~~~~~~~~v~~~t~g~G~ 97 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY----GATD---ILNYKNGHIEDQVMKLTNGKGV 97 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH----TCSE---EECGGGSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh----Cccc---cccccchhHHHHHHHHhhccCc
Confidence 5889999986 8999999998888998 6999999988766543 23 3222 23444444444444443 359
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|++|.++|.
T Consensus 98 D~vid~~g~ 106 (174)
T d1jqba2 98 DRVIMAGGG 106 (174)
T ss_dssp EEEEECSSC
T ss_pred ceEEEccCC
Confidence 999999984
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.02 E-value=0.0018 Score=52.04 Aligned_cols=76 Identities=24% Similarity=0.332 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|.+++|.|+ |++|...+..+...|++|+++++++++++.+. ++ +.+.. .|.++.+..+++.+.....|.+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~----Ga~~~---i~~~~~~~~~~~~~~~~g~~~~ 97 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KL----GASLT---VNARQEDPVEAIQRDIGGAHGV 97 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT----TCSEE---EETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-cc----Ccccc---ccccchhHHHHHHHhhcCCccc
Confidence 5889999886 99999999888888999999999988876543 22 33222 3555555555555554456666
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
|-+++
T Consensus 98 i~~~~ 102 (166)
T d1llua2 98 LVTAV 102 (166)
T ss_dssp EECCS
T ss_pred ccccc
Confidence 66665
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.01 E-value=0.0023 Score=51.10 Aligned_cols=117 Identities=13% Similarity=0.081 Sum_probs=65.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC---------eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA---------RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~---------~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
++.|+||+|.+|..++..|+..+. +++..+++.+.++....++..........+...-.+. +.+
T Consensus 6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 78 (154)
T d1y7ta1 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK-------VAF 78 (154)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH-------HHT
T ss_pred EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh-------hhc
Confidence 799999999999999999998753 2233344445555544444433333333333322221 223
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
...|++|..||..... ..+.++ .++.|+ .+++.+.+.+.+... ....|+.+|.
T Consensus 79 ~~advViitaG~~~~p---g~~r~d---l~~~N~----~i~~~~~~~i~k~a~-~~~~vivvsN 131 (154)
T d1y7ta1 79 KDADYALLVGAAPRKA---GMERRD---LLQVNG----KIFTEQGRALAEVAK-KDVKVLVVGN 131 (154)
T ss_dssp TTCSEEEECCCCCCCT---TCCHHH---HHHHHH----HHHHHHHHHHHHHSC-TTCEEEECSS
T ss_pred ccccEEEeecCcCCCC---CCcHHH---HHHHHH----HHHHHHHHHHHHhCC-CCcEEEEecC
Confidence 4789999999975431 224333 344444 445555555555321 0345656654
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.97 E-value=0.0018 Score=52.46 Aligned_cols=45 Identities=22% Similarity=0.298 Sum_probs=39.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSI 81 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l 81 (366)
++|.++|.|+ ||.+++++..|.+.|. +|.++.|+.++.+++.+.+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~ 61 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 61 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence 6889999996 8999999999999997 6999999999888776654
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.96 E-value=0.0046 Score=49.58 Aligned_cols=121 Identities=12% Similarity=0.198 Sum_probs=76.0
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHH
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~ 104 (366)
.+..+++..++.|+|+ |.+|..+|..|+.+|. +++++|++++.++..+.++... .+........|..
T Consensus 12 ~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~------- 83 (159)
T d2ldxa1 12 VPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN------- 83 (159)
T ss_dssp SSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG-------
T ss_pred cccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh-------
Confidence 3445567777888896 9999999999999975 7999999988877666666542 1223323333322
Q ss_pred HHHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 105 ALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 105 ~~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
....-|++|..||........ .. +.++.| ..+.+.+.+.+.+... .+.++.+|.
T Consensus 84 ---~~~~adivvitag~~~~~~~~---R~---dll~~N----~~i~~~i~~~i~~~~p--~~ivivvtN 137 (159)
T d2ldxa1 84 ---VSANSKLVIITAGARMVSGQT---RL---DLLQRN----VAIMKAIVPGVIQNSP--DCKIIVVTN 137 (159)
T ss_dssp ---GGTTEEEEEECCSCCCCTTTC---SS---CTTHHH----HHHHHHHTTTHHHHST--TCEEEECSS
T ss_pred ---hhccccEEEEecccccCCCCC---HH---HHHHHH----HHHHHHHHHHHhccCC--CeEEEEeCC
Confidence 234689999999975432211 11 123333 3445566666665542 456776665
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.96 E-value=0.012 Score=47.13 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=77.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHH
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~ 105 (366)
....++.+++.|.|+ |.+|.++|..|+.+|. +++++|++++..+..+.++... .+........|..+
T Consensus 14 ~~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~------- 85 (160)
T d1i0za1 14 EEATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV------- 85 (160)
T ss_dssp SCCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG-------
T ss_pred ccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh-------
Confidence 344566788999996 9999999999999986 7999999988877666666431 12233222333222
Q ss_pred HHhcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 106 LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 106 ~~~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
...-|++|..||...... .+. .+.++.| ..+++.+.+.+.+... .+-++++|.-
T Consensus 86 ---~~~adiVVitAg~~~~~g---~tR---~~l~~~N----~~i~~~i~~~i~~~~p--~aiiivvtNP 139 (160)
T d1i0za1 86 ---TANSKIVVVTAGVRQQEG---ESR---LNLVQRN----VNVFKFIIPQIVKYSP--DCIIIVVSNP 139 (160)
T ss_dssp ---GTTCSEEEECCSCCCCTT---CCG---GGGHHHH----HHHHHHHHHHHHHHCT--TCEEEECSSS
T ss_pred ---cccccEEEEecCCccccC---cch---HHHHHHH----HHHHHHHHHHHHhcCC--CcEEEEeCCc
Confidence 346899999999754321 122 1233334 4466677777766542 4567776663
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.94 E-value=0.0025 Score=52.06 Aligned_cols=79 Identities=19% Similarity=0.257 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~id 113 (366)
+|.+++|+|+ ||+|...+..+...|+ +|+++++++++++.+.+ + +.+..+-.-|-.+ .+.+.+... -+.+|
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~----GA~~~in~~~~~~~~~~~~~~~~-g~G~d 101 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V----GATECISPKDSTKPISEVLSEMT-GNNVG 101 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H----TCSEEECGGGCSSCHHHHHHHHH-TSCCC
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c----CCcEEECccccchHHHHHHHHhc-cccce
Confidence 6889999986 9999999999999995 79999999998875443 2 3333322223222 222222222 34799
Q ss_pred EEEEcCCC
Q 017757 114 VLVVNQGV 121 (366)
Q Consensus 114 ~vi~nAG~ 121 (366)
++|.+.|.
T Consensus 102 ~vi~~~g~ 109 (176)
T d1d1ta2 102 YTFEVIGH 109 (176)
T ss_dssp EEEECSCC
T ss_pred EEEEeCCc
Confidence 99999983
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.94 E-value=0.0038 Score=50.60 Aligned_cols=78 Identities=23% Similarity=0.321 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~i 112 (366)
.|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+.+.+ + +........|- ++.+.+..+. .+.+
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~----Ga~~~i~~~~~--~~~~~~~~~~~~~~G~ 99 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V----GATECVNPQDY--KKPIQEVLTEMSNGGV 99 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T----TCSEEECGGGC--SSCHHHHHHHHTTSCB
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h----CCeeEEecCCc--hhHHHHHHHHHhcCCC
Confidence 6899999998 7899999999999985 79999999988765433 2 32222211122 2223333333 2579
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|++|.+.|.
T Consensus 100 D~vid~~G~ 108 (176)
T d2jhfa2 100 DFSFEVIGR 108 (176)
T ss_dssp SEEEECSCC
T ss_pred CEEEecCCc
Confidence 999999984
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.89 E-value=0.00072 Score=55.92 Aligned_cols=104 Identities=13% Similarity=0.222 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-cCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-AGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~~~id 113 (366)
++++|||+||+||+|...++-....|+++++ +++++++..++..++ +.+.. .|.++++..+.+-+. ...+|
T Consensus 30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~----gad~v---i~~~~~~~~~~~~~~~~~GvD 102 (187)
T d1vj1a2 30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL----GFDAA---VNYKTGNVAEQLREACPGGVD 102 (187)
T ss_dssp SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS----CCSEE---EETTSSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc----cceEE---eeccchhHHHHHHHHhccCce
Confidence 3589999999999999999888878997554 566655555444433 33322 244443333333222 24699
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~ 177 (366)
+++.+.|. . ..+..++.++. .|+++.+++..+.
T Consensus 103 vv~D~vGg------------------------~--~~~~~~~~l~~-----~G~iv~~G~~s~~ 135 (187)
T d1vj1a2 103 VYFDNVGG------------------------D--ISNTVISQMNE-----NSHIILCGQISQY 135 (187)
T ss_dssp EEEESSCH------------------------H--HHHHHHTTEEE-----EEEEEEC------
T ss_pred EEEecCCc------------------------h--hHHHHhhhccc-----cccEEEecccccc
Confidence 99999972 1 12234445544 6899999886654
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.86 E-value=0.0036 Score=50.47 Aligned_cols=77 Identities=22% Similarity=0.248 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|.+++|.|+ |++|...+..+...|++|+++++++++++.+.+ + |.+... |-.+.+...+ +..+..|++
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-l----Ga~~~i---~~~~~~~~~~--~~~~~~d~v 95 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M----GADHYI---ATLEEGDWGE--KYFDTFDLI 95 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H----TCSEEE---EGGGTSCHHH--HSCSCEEEE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-c----CCcEEe---eccchHHHHH--hhhcccceE
Confidence 6899999986 899999888777889999999999988775432 2 333222 2222211111 123578999
Q ss_pred EEcCCCCC
Q 017757 116 VVNQGVFV 123 (366)
Q Consensus 116 i~nAG~~~ 123 (366)
+.+.|...
T Consensus 96 i~~~~~~~ 103 (168)
T d1piwa2 96 VVCASSLT 103 (168)
T ss_dssp EECCSCST
T ss_pred EEEecCCc
Confidence 99987544
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.86 E-value=0.0047 Score=48.77 Aligned_cols=118 Identities=15% Similarity=0.155 Sum_probs=71.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
|++.|+|+ |.+|.++|..|+.+|. +++++++++++++....++... ..........|. +....-
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~----------~~l~~a 70 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW----------AALADA 70 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG----------GGGTTC
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH----------HHhccc
Confidence 67888895 9999999999999874 7999999998877655555532 122333333332 223468
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
|++|.+||...... +-.-++-.+.++.| ..+++.+.+.+.+... .+.++.+|--
T Consensus 71 diVVitaG~~~~~~--~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p--~aivivvtNP 124 (146)
T d1hyha1 71 DVVISTLGNIKLQQ--DNPTGDRFAELKFT----SSMVQSVGTNLKESGF--HGVLVVISNP 124 (146)
T ss_dssp SEEEECCSCGGGTC---------CTTHHHH----HHHHHHHHHHHHHTTC--CSEEEECSSS
T ss_pred cEEEEecccccccc--ccCCccHHHHHHHH----HHHHHHHHHHHhhcCC--CeEEEEecCc
Confidence 99999999653211 00111112234444 3556677777766542 4566666653
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.82 E-value=0.0029 Score=51.33 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeE-EEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-cCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARV-SILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-AGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V-~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~~~id 113 (366)
.|.+++|.|+ |++|...+..+...|+++ +++++++++++.+. ++ +... + .|..+++..+++.+- -+++|
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~----Ga~~-~--i~~~~~~~~~~i~~~t~gg~D 98 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL----GATH-V--INSKTQDPVAAIKEITDGGVN 98 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH----TCSE-E--EETTTSCHHHHHHHHTTSCEE
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc----CCeE-E--EeCCCcCHHHHHHHHcCCCCc
Confidence 5889999997 899999998888889865 56677777665543 33 3221 2 344554333333332 25799
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++|.+.|
T Consensus 99 ~vid~~G 105 (174)
T d1f8fa2 99 FALESTG 105 (174)
T ss_dssp EEEECSC
T ss_pred EEEEcCC
Confidence 9999998
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.80 E-value=0.0021 Score=51.82 Aligned_cols=74 Identities=22% Similarity=0.282 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|.+++|.|+ |++|...+..+...|++++++++++++.+.+ +++ +.+. ..|..+.+..... .+.+|++
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~l----Gad~---~i~~~~~~~~~~~---~~~~D~v 97 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KAL----GADE---VVNSRNADEMAAH---LKSFDFI 97 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHH----TCSE---EEETTCHHHHHTT---TTCEEEE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hcc----CCcE---EEECchhhHHHHh---cCCCcee
Confidence 5899999986 8999999988888999999999998876533 333 3332 2355665543322 3479999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
|.+.|.
T Consensus 98 id~~g~ 103 (168)
T d1uufa2 98 LNTVAA 103 (168)
T ss_dssp EECCSS
T ss_pred eeeeec
Confidence 999984
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.77 E-value=0.0086 Score=48.71 Aligned_cols=119 Identities=11% Similarity=0.037 Sum_probs=65.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCc--hhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGA-------RVSILARSG--KKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~ 107 (366)
.-++.||||+|.||..++..|++.+. .+.+.+.+. +.++....+++............ -++. .+
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~------~~ 96 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDP------YE 96 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCH------HH
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccc------hh
Confidence 34699999999999999999998532 345555544 33444444444322222221111 1121 13
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
.+...|++|..+|..... ..+.+ +.++.|. .+.+...+.+.+... ....|+.+|-
T Consensus 97 ~~~~aDvVvi~ag~~rkp---g~tR~---Dll~~N~----~I~k~~~~~i~~~a~-~~~~vlvv~N 151 (175)
T d7mdha1 97 VFEDVDWALLIGAKPRGP---GMERA---ALLDING----QIFADQGKALNAVAS-KNVKVLVVGN 151 (175)
T ss_dssp HTTTCSEEEECCCCCCCT---TCCHH---HHHHHHH----HHHHHHHHHHHHHSC-TTCEEEECSS
T ss_pred hccCCceEEEeeccCCCC---CCcHH---HHHHHHH----HHHHHHHHHHHhhCC-CCcEEEEecC
Confidence 344789999999975321 12433 3555564 455566666665321 0345655654
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.71 E-value=0.0018 Score=51.28 Aligned_cols=112 Identities=23% Similarity=0.229 Sum_probs=66.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCch--hHHHHHHHHHhh---cCC--eEEEEEecCCCHHHHHHHHHhc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGK--KLEEAKQSIQLA---TGI--EVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~--~~~~~~~~l~~~---~~~--~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
++.|+||+|.+|.++|..|+.+| .++++++++++ +++....++... ... ++.....+ +. +..
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~-------~~l 72 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL-------RII 72 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG-------GGG
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hH-------HHh
Confidence 48899999999999999999998 48999999763 333334444331 122 33222211 11 223
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEec
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMS 172 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vs 172 (366)
..-|++|.+||...... .+.. +.++.|.. +.+.+.+.+.+.. +..|+.+|
T Consensus 73 ~~aDvVVitAG~~~~~g---~sR~---dl~~~Na~----iv~~i~~~i~~~~---~~~iivVt 122 (145)
T d1hyea1 73 DESDVVIITSGVPRKEG---MSRM---DLAKTNAK----IVGKYAKKIAEIC---DTKIFVIT 122 (145)
T ss_dssp TTCSEEEECCSCCCCTT---CCHH---HHHHHHHH----HHHHHHHHHHHHC---CCEEEECS
T ss_pred ccceEEEEecccccCCC---CChh---hhhhhhHH----HHHHHHHHHhccC---CCeEEEEc
Confidence 46899999999743221 2333 34555554 4555555555543 33455454
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.71 E-value=0.002 Score=53.59 Aligned_cols=114 Identities=20% Similarity=0.202 Sum_probs=67.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~i 112 (366)
.|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+.+ .+.... .|-.+.+-.+++.+. -..+
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-----~Ga~~~---~~~~~~~~~~~i~~~t~g~g~ 95 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-----QGFEIA---DLSLDTPLHEQIAALLGEPEV 95 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-----TTCEEE---ETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-----ccccEE---EeCCCcCHHHHHHHHhCCCCc
Confidence 5889999986 8999888888877787 68899999887764432 243332 232332222233222 2468
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
|++|.+.|......... ..+..+.-..++.++..+++ .|+|+.++-
T Consensus 96 D~vid~vG~~~~~~~~~----------~~~~~~~~~~l~~~~~~~r~-----gG~v~~~G~ 141 (195)
T d1kola2 96 DCAVDAVGFEARGHGHE----------GAKHEAPATVLNSLMQVTRV-----AGKIGIPGL 141 (195)
T ss_dssp EEEEECCCTTCBCSSTT----------GGGSBCTTHHHHHHHHHEEE-----EEEEEECSC
T ss_pred EEEEECccccccCCccc----------ceeecCcHHHHHHHHHHHhc-----CCEEEEeee
Confidence 99999998543221110 01111222234455555555 579998875
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.69 E-value=0.0073 Score=49.00 Aligned_cols=77 Identities=23% Similarity=0.335 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHh--cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDE--AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~--~~~ 111 (366)
.|.+++|.|+ |+||...+..+...|+ +|+++++++++++.+ +++ +.... + |..+ ++.++...+. -+.
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~----Ga~~~-i--~~~~~~~~~~~~~~~~~~~G 98 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL----GATDC-L--NPRELDKPVQDVITELTAGG 98 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT----TCSEE-E--CGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh----CCCcc-c--CCccchhhhhhhHhhhhcCC
Confidence 6889999975 9999999999999998 588889998886543 333 33222 1 2211 1122333222 357
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.++|.
T Consensus 99 ~d~vie~~G~ 108 (174)
T d1e3ia2 99 VDYSLDCAGT 108 (174)
T ss_dssp BSEEEESSCC
T ss_pred CcEEEEeccc
Confidence 9999999993
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.61 E-value=0.0046 Score=48.90 Aligned_cols=76 Identities=14% Similarity=0.156 Sum_probs=60.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEEc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~n 118 (366)
.++|.|. |.+|+.++++|.++|.+|++++.++++..+..++.. ...+.++..|.++++.++++-- ...|.+|..
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~---~~~~~vi~Gd~~d~~~L~~a~i--~~a~~vi~~ 78 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAGI--DRCRAILAL 78 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHTT--TTCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh---cCCcEEEEccCcchHHHHHhcc--ccCCEEEEc
Confidence 5778886 799999999999999999999999877665555443 3467889999999987766532 367888887
Q ss_pred CC
Q 017757 119 QG 120 (366)
Q Consensus 119 AG 120 (366)
.+
T Consensus 79 ~~ 80 (153)
T d1id1a_ 79 SD 80 (153)
T ss_dssp SS
T ss_pred cc
Confidence 64
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.55 E-value=0.0011 Score=53.74 Aligned_cols=101 Identities=20% Similarity=0.189 Sum_probs=66.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~id 113 (366)
++.++||+||+||+|...+.-....|++|+.+.+++++.+.+.+ + +.+... |- .+...+..++ -+++|
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-l----Gad~vi---~~--~~~~~~~~~~~~~~gvd 92 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-L----GASEVI---SR--EDVYDGTLKALSKQQWQ 92 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-H----TCSEEE---EH--HHHCSSCCCSSCCCCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-h----cccceE---ec--cchhchhhhcccCCCce
Confidence 57789999999999999998777789999999999888665433 2 333321 11 1111111111 25799
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccc
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~ 177 (366)
+++.+.|.. .++..++.++. .|+++.++...+.
T Consensus 93 ~vid~vgg~--------------------------~~~~~~~~l~~-----~G~iv~~G~~~g~ 125 (167)
T d1tt7a2 93 GAVDPVGGK--------------------------QLASLLSKIQY-----GGSVAVSGLTGGG 125 (167)
T ss_dssp EEEESCCTH--------------------------HHHHHHTTEEE-----EEEEEECCCSSCS
T ss_pred EEEecCcHH--------------------------HHHHHHHHhcc-----CceEEEeeccCCC
Confidence 999998731 11234445544 5899999887764
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.54 E-value=0.0046 Score=48.69 Aligned_cols=117 Identities=17% Similarity=0.145 Sum_probs=67.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
++.|+||+|.+|.++|..|+.+|. ++++++.++.+.+ ...+....... ... ......+..+.++ .-|++|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~~--~~~-~~~~~~~~~~~~~---~aDivV 73 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETRA--TVK-GYLGPEQLPDCLK---GCDVVV 73 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSSC--EEE-EEESGGGHHHHHT---TCSEEE
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhhc--CCC-eEEcCCChHHHhC---CCCEEE
Confidence 578999999999999999999985 5999998765433 23333211111 111 1112233333333 689999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
..||...... .+. .+.++.|..-. +.+.+.+.+... .+.++.+|.-.
T Consensus 74 itag~~~~~g---~sR---~~ll~~N~~i~----~~i~~~i~~~~p--~~iiivvtNPv 120 (144)
T d1mlda1 74 IPAGVPRKPG---MTR---DDLFNTNATIV----ATLTAACAQHCP--DAMICIISNPV 120 (144)
T ss_dssp ECCSCCCCTT---CCG---GGGHHHHHHHH----HHHHHHHHHHCT--TSEEEECSSCH
T ss_pred ECCCcCCCCC---CCc---chHHHHHHHHH----HHHHHHHHhcCC--CeEEEEecCch
Confidence 9999643221 122 22455665544 445555554432 46777777643
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.51 E-value=0.0023 Score=48.14 Aligned_cols=42 Identities=26% Similarity=0.406 Sum_probs=36.8
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
|..++++||+++|.|+ |.+|..-++.|.+.|++|++++....
T Consensus 5 Pi~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 5 PIFCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp EEEECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred ceEEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 3456899999999996 77999999999999999999987654
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.48 E-value=0.0046 Score=48.84 Aligned_cols=84 Identities=19% Similarity=0.143 Sum_probs=54.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh-cC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-AG 110 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~-~~ 110 (366)
.++..-|++.|.||.|-+|..+|+.|.++|++|.+.+|+.....+... ...+......++.....+..-+.. ..
T Consensus 4 ~~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~v~~~~~~~~~ 78 (152)
T d2pv7a2 4 TINSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL-----ANADVVIVSVPINLTLETIERLKPYLT 78 (152)
T ss_dssp CSCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH-----TTCSEEEECSCGGGHHHHHHHHGGGCC
T ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh-----hhccccccccchhhheeeeeccccccc
Confidence 456677899999999999999999999999999999998765443221 134555555554443333222222 22
Q ss_pred CCcEEEEcCC
Q 017757 111 PVDVLVVNQG 120 (366)
Q Consensus 111 ~id~vi~nAG 120 (366)
+=.+++..+.
T Consensus 79 ~~~iiiD~~S 88 (152)
T d2pv7a2 79 ENMLLADLTS 88 (152)
T ss_dssp TTSEEEECCS
T ss_pred CCceEEEecc
Confidence 2235555554
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.47 E-value=0.0085 Score=46.95 Aligned_cols=112 Identities=20% Similarity=0.187 Sum_probs=64.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++.|+|+ |.+|.++|..++.++. +++++|++++.++....++.... .........| .+....-|+
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~----------~~~~~~adi 71 (142)
T d1y6ja1 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD----------YSDVKDCDV 71 (142)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C----------GGGGTTCSE
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc----------HHHhCCCce
Confidence 4556686 9999999999999975 79999999887665555555321 1222222211 123446899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
+|..||...... .+ -.+.+..|. .+++.+.+.+.+... .+.++.+|.
T Consensus 72 vvitag~~~~~~---~~---r~~l~~~N~----~i~~~i~~~i~~~~p--~ai~ivvtN 118 (142)
T d1y6ja1 72 IVVTAGANRKPG---ET---RLDLAKKNV----MIAKEVTQNIMKYYN--HGVILVVSN 118 (142)
T ss_dssp EEECCCC---------C---HHHHHHHHH----HHHHHHHHHHHHHCC--SCEEEECSS
T ss_pred EEEecccccCcC---cc---hhHHhhHHH----HHHHHHHHHhhccCC--CceEEEecC
Confidence 999999653211 12 233445554 555666666666442 356666655
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.47 E-value=0.0018 Score=52.98 Aligned_cols=42 Identities=24% Similarity=0.321 Sum_probs=37.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA 77 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~ 77 (366)
++.++||+||+||+|...++-....|++|+.+.+++++.+.+
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~ 72 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence 566899999999999999988888999999999998886544
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.45 E-value=0.028 Score=43.88 Aligned_cols=112 Identities=20% Similarity=0.245 Sum_probs=68.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++.|+|+ |.+|.++|..++.+|. +++++++++++++....+++.. .+........|. +....-|
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~----------~~~~daD 71 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP----------EICRDAD 71 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG----------GGGTTCS
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH----------HHhhCCc
Confidence 4677796 9999999999999985 7999999988776555555432 122222222221 1123579
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
++|..||..... ..+.. +.+..|. .+++.+.+.+.+... .+.++.+|.
T Consensus 72 vVVitaG~~~~~---g~~R~---dl~~~N~----~i~~~i~~~i~~~~p--~ai~ivvtN 119 (143)
T d1llda1 72 MVVITAGPRQKP---GQSRL---ELVGATV----NILKAIMPNLVKVAP--NAIYMLITN 119 (143)
T ss_dssp EEEECCCCCCCT---TCCHH---HHHHHHH----HHHHHHHHHHHHHCT--TSEEEECCS
T ss_pred EEEEecccccCC---CCchh---hhhhhhH----HHHHHHHHHHHhhCC--CeEEEEeCC
Confidence 999999965322 22333 3455554 455556666655442 356666664
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.44 E-value=0.0062 Score=49.38 Aligned_cols=78 Identities=22% Similarity=0.326 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHH-HHHHHHHh--cC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFD-AVKTALDE--AG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~-~v~~~~~~--~~ 110 (366)
-.|.+++|.|+ ||+|...+..+...|+ +|+++++++++++.+.+ + +.+.. .|.++.+ .+.+..+. -+
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l----Ga~~~---i~~~~~d~~~~~~~~~~~~~ 96 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L----GATEC---LNPKDYDKPIYEVICEKTNG 96 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T----TCSEE---ECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c----CCcEE---EcCCCchhHHHHHHHHhcCC
Confidence 36889999986 8999999999999997 68999999988775533 2 33322 2333322 12333222 25
Q ss_pred CCcEEEEcCCC
Q 017757 111 PVDVLVVNQGV 121 (366)
Q Consensus 111 ~id~vi~nAG~ 121 (366)
.+|++|-++|.
T Consensus 97 G~d~vid~~g~ 107 (174)
T d1p0fa2 97 GVDYAVECAGR 107 (174)
T ss_dssp CBSEEEECSCC
T ss_pred CCcEEEEcCCC
Confidence 79999999983
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.40 E-value=0.0024 Score=52.05 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=56.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeE-EEE-EecCCCHHHHHHHHHhcC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEV-ATY-SADVRDFDAVKTALDEAG 110 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v-~~~-~~Dls~~~~v~~~~~~~~ 110 (366)
.+++||.++|.|+ ||.+++++..|.+.| +|.++.|+.++.++..+.+........ ..+ ..|+. ....
T Consensus 14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 82 (177)
T d1nvta1 14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLD---------VDLD 82 (177)
T ss_dssp CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTT---------CCCT
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhh---------hccc
Confidence 4589999999995 889999999998777 999999999999998888765432211 000 01111 1124
Q ss_pred CCcEEEEcCCCC
Q 017757 111 PVDVLVVNQGVF 122 (366)
Q Consensus 111 ~id~vi~nAG~~ 122 (366)
..|++||+....
T Consensus 83 ~~dliIn~tp~g 94 (177)
T d1nvta1 83 GVDIIINATPIG 94 (177)
T ss_dssp TCCEEEECSCTT
T ss_pred hhhhhccCCccc
Confidence 689999997654
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.37 E-value=0.0094 Score=47.52 Aligned_cols=76 Identities=28% Similarity=0.306 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|.+++|.|+ |++|...+..+...|++|+++++++++++.+.+ + +.+.. .|-++.+..+.+.+.....|.+
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~-~----Ga~~~---~~~~~~~~~~~~~~~~~~~~~~ 97 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-L----GADLV---VNPLKEDAAKFMKEKVGGVHAA 97 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T----TCSEE---ECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh-c----Cccee---cccccchhhhhcccccCCCceE
Confidence 5789999875 999999998888899999999999888765432 2 33322 2334333333333333455666
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
|.+++
T Consensus 98 v~~~~ 102 (168)
T d1rjwa2 98 VVTAV 102 (168)
T ss_dssp EESSC
T ss_pred EeecC
Confidence 67776
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.34 E-value=0.027 Score=43.92 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=69.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCc--hhHHHHHHHHHh--hcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSG--KKLEEAKQSIQL--ATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~--~~~~~~~~~l~~--~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++.|+||+|.+|.++|..+..++. ++++.+.+. +.++-...++.. ...........|.. ....-
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~----------~~~~a 71 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE----------DTAGS 71 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG----------GGTTC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH----------Hhhhc
Confidence 578999999999999999999975 699998643 333333333432 11233333333321 23468
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
|++|..||...... .+ -.+.++.|. -+.+.+.+.+.+... .+.++.+|.
T Consensus 72 DiVvitaG~~~~~g---~~---R~dl~~~N~----~I~~~i~~~i~~~~p--~~i~ivvtN 120 (142)
T d1o6za1 72 DVVVITAGIPRQPG---QT---RIDLAGDNA----PIMEDIQSSLDEHND--DYISLTTSN 120 (142)
T ss_dssp SEEEECCCCCCCTT---CC---HHHHHHHHH----HHHHHHHHHHHTTCS--CCEEEECCS
T ss_pred CEEEEecccccccC---Cc---hhhHHHHHH----HHHHHHHHHHHhcCC--CceEEEecC
Confidence 99999999643211 23 233555554 456667777776542 456666655
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.28 E-value=0.024 Score=44.40 Aligned_cols=116 Identities=19% Similarity=0.261 Sum_probs=66.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHC---CCeEEEEecCchhHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKE---GARVSILARSGKKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~---G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++.|+|++|.+|.++|..|+.+ +.++.+.+..+ ..+....++..... ..... ..+-.+.++ ++ .-|+
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~----~~---~aDv 72 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG-FSGEDATPA----LE---GADV 72 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE-ECSSCCHHH----HT---TCSE
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE-EEcCCCccc----cC---CCCE
Confidence 5789999999999999988653 46899999864 44444444443211 12222 222223222 22 5799
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
+|.+||...... .+. .+.++.|. .+.+.+.+.+.+... .+.++.+|.-.
T Consensus 73 vvitaG~~~k~g---~~R---~dl~~~N~----~i~~~v~~~i~~~~p--~aivivvtNPv 121 (145)
T d2cmda1 73 VLISAGVRRKPG---MDR---SDLFNVNA----GIVKNLVQQVAKTCP--KACIGIITNPV 121 (145)
T ss_dssp EEECCSCCCCTT---CCG---GGGHHHHH----HHHHHHHHHHHHHCT--TSEEEECSSSH
T ss_pred EEECCCccCCCC---cch---hhHHHHHH----HHHHHHHHHHHhhCC--CcEEEEccCCc
Confidence 999999753321 122 23455564 344555555555432 35677776633
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.27 E-value=0.026 Score=43.89 Aligned_cols=112 Identities=16% Similarity=0.201 Sum_probs=70.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++.|.|+ |.+|.++|..++.++ .++++.|+++++++....++.... .........|. +....-|+
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~----------~~~~~adi 70 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY----------ADLKGSDV 70 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG----------GGGTTCSE
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH----------HHhcCCCE
Confidence 4567796 899999999999987 479999999888776555554421 12333333221 22346899
Q ss_pred EEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 115 vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
+|.+||...... .+.. +.+..|. .+++.+.+.+.+... .+.++++|.
T Consensus 71 vvitag~~~~~g---~~r~---dl~~~N~----~I~~~i~~~i~~~~p--~aivivvtN 117 (140)
T d1a5za1 71 VIVAAGVPQKPG---ETRL---QLLGRNA----RVMKEIARNVSKYAP--DSIVIVVTN 117 (140)
T ss_dssp EEECCCCCCCSS---CCHH---HHHHHHH----HHHHHHHHHHHHHCT--TCEEEECSS
T ss_pred EEEecccccCCC---cchh---hhhcccc----chHHHHHHHHHhcCC--CcEEEEeCC
Confidence 999999754321 2322 2344443 456667777766542 456666554
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.27 E-value=0.02 Score=44.71 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=67.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh---cCCeEEEE-EecCCCHHHHHHHHHhcCCC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA---TGIEVATY-SADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~-~~Dls~~~~v~~~~~~~~~i 112 (366)
|++.|+|+ |.+|.++|..|+.++. ++++.+.+++..+....++... .+...... .-|.. ....-
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~----------~~~~a 70 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA----------DTANS 70 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG----------GGTTC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH----------HhcCC
Confidence 46777796 9999999999999874 7999999888766555554321 12222111 11211 12368
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
|++|.+||..... .++-.+.+..|. -+++...+.+.+... .+.++.+|.
T Consensus 71 dvvvitag~~~~~------~~~r~dl~~~N~----~i~~~i~~~i~k~~p--~aivivvtN 119 (142)
T d1uxja1 71 DVIVVTSGAPRKP------GMSREDLIKVNA----DITRACISQAAPLSP--NAVIIMVNN 119 (142)
T ss_dssp SEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCT--TCEEEECSS
T ss_pred CEEEEeeeccCCc------CcchhHHHhHHH----HHHHHHHHHHhccCC--CceEEEeCC
Confidence 9999999975421 111223444554 467777777777542 455665554
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.26 E-value=0.0022 Score=46.53 Aligned_cols=75 Identities=15% Similarity=0.171 Sum_probs=50.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+++||+++|.|. |.-|+++|+.|.++|++|++.+.+..... .+++. ..+....... +. ..++ .+|
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~----~~~~~~~~~~-~~----~~~~---~~d 66 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLP----EAVERHTGSL-ND----EWLM---AAD 66 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSC----TTSCEEESBC-CH----HHHH---HCS
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHh----hccceeeccc-ch----hhhc---cCC
Confidence 589999999997 77899999999999999999998654211 11111 1222222222 12 1223 579
Q ss_pred EEEEcCCCCC
Q 017757 114 VLVVNQGVFV 123 (366)
Q Consensus 114 ~vi~nAG~~~ 123 (366)
.+|...|+..
T Consensus 67 ~vi~SPGi~~ 76 (93)
T d2jfga1 67 LIVASPGIAL 76 (93)
T ss_dssp EEEECTTSCT
T ss_pred EEEECCCCCC
Confidence 9999999853
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.21 E-value=0.013 Score=47.16 Aligned_cols=76 Identities=24% Similarity=0.239 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~i 112 (366)
.|.+++|.|+ |++|...+..+...|+ +|+.+++++++++.+.+ + +... .+ |- +.+.+++..+.. ..+
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~----ga~~-~i--~~-~~~~~~~~~~~~~~~g~ 101 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L----GADH-VV--DA-RRDPVKQVMELTRGRGV 101 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T----TCSE-EE--ET-TSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c----ccce-ee--cC-cccHHHHHHHhhCCCCc
Confidence 4789999985 9999999998888886 57778888877654432 2 3222 22 32 234455555543 469
Q ss_pred cEEEEcCCC
Q 017757 113 DVLVVNQGV 121 (366)
Q Consensus 113 d~vi~nAG~ 121 (366)
|++|.++|.
T Consensus 102 d~vid~~g~ 110 (172)
T d1h2ba2 102 NVAMDFVGS 110 (172)
T ss_dssp EEEEESSCC
T ss_pred eEEEEecCc
Confidence 999999983
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.09 E-value=0.0029 Score=50.52 Aligned_cols=122 Identities=18% Similarity=0.178 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
-+.+++.|+|+ |.+|..+|..|+.++ ++++++|.+++.++.....+... .+........ ++. ++.. .
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~---~ 75 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAAL---T 75 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHH---T
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhh---c
Confidence 35677888897 999999999999888 47999999988777666655432 1222111111 111 1222 2
Q ss_pred CCcEEEEcCCCCCC-CC-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 111 PVDVLVVNQGVFVP-GE-LEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 111 ~id~vi~nAG~~~~-~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
.-|++|.+||.... +. -.+.+.. +.+..|. -+++.+.+.+.+... .+.++.+|.-
T Consensus 76 ~adiVvitag~~~~~g~~~~~~tR~---~l~~~n~----~iv~~i~~~i~~~~p--~aiviivsNP 132 (154)
T d1pzga1 76 GADCVIVTAGLTKVPGKPDSEWSRN---DLLPFNS----KIIREIGQNIKKYCP--KTFIIVVTNP 132 (154)
T ss_dssp TCSEEEECCSCSSCTTCCGGGCCGG---GGHHHHH----HHHHHHHHHHHHHCT--TCEEEECCSS
T ss_pred CCCeEEEecccccCCCCCCcccchh---hhhhhhH----HHHHHHHHHHHhcCC--CcEEEEeCCc
Confidence 68999999997542 21 1112221 1233333 345555565555442 4566666653
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.09 E-value=0.046 Score=42.41 Aligned_cols=113 Identities=12% Similarity=0.187 Sum_probs=67.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC--CeEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G--~~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
++.|+|| |.+|.+++..|+.+| .++++.|+++++++.....+... ...+...... .+. +.....|
T Consensus 2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~-------~~~~dad 71 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY-------ADTANSD 71 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG-------GGGTTCS
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH-------HHhcCCe
Confidence 3677796 999999999999997 58999999998776555444321 1223322222 122 1234689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
++|.+||...... .+. .+.++.|.. +.+...+.+.+... .+.++++|-
T Consensus 72 vvvitag~~~~~g---~~r---~~l~~~N~~----i~~~i~~~i~~~~p--~aivivvtN 119 (142)
T d1guza1 72 IVIITAGLPRKPG---MTR---EDLLMKNAG----IVKEVTDNIMKHSK--NPIIIVVSN 119 (142)
T ss_dssp EEEECCSCCCCTT---CCH---HHHHHHHHH----HHHHHHHHHHHHCS--SCEEEECCS
T ss_pred EEEEEEecCCCCC---Cch---HHHHHHHHH----HHHHHHHHhhccCC--CeEEEEecC
Confidence 9999999754321 122 233444443 44555555555431 355666655
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.06 E-value=0.032 Score=44.62 Aligned_cols=79 Identities=24% Similarity=0.222 Sum_probs=61.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.+.-+++|.|+ |--|++.++....-|++|.+.|.+.++++++..... ..+.+ -.++++.+++.++ ..|+
T Consensus 30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~----~~~~~---~~~~~~~l~~~~~---~aDi 98 (168)
T d1pjca1 30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----SRVEL---LYSNSAEIETAVA---EADL 98 (168)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGSEE---EECCHHHHHHHHH---TCSE
T ss_pred CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc----cccee---ehhhhhhHHHhhc---cCcE
Confidence 35678999996 778999999999999999999999998877655543 23333 3467888888777 6799
Q ss_pred EEEcCCCCCC
Q 017757 115 LVVNQGVFVP 124 (366)
Q Consensus 115 vi~nAG~~~~ 124 (366)
+|.++-+...
T Consensus 99 vI~aalipG~ 108 (168)
T d1pjca1 99 LIGAVLVPGR 108 (168)
T ss_dssp EEECCCCTTS
T ss_pred EEEeeecCCc
Confidence 9999976543
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.00 E-value=0.0062 Score=50.31 Aligned_cols=46 Identities=28% Similarity=0.461 Sum_probs=40.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHh
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQL 83 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~ 83 (366)
=|++.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+++
T Consensus 4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~ 49 (192)
T d1f0ya2 4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE 49 (192)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence 378999997 8899999999999999999999999888877776653
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.96 E-value=0.016 Score=46.50 Aligned_cols=77 Identities=21% Similarity=0.246 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHHHh--cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLATGIEVATYSADVRD-FDAVKTALDE--AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~-~~~v~~~~~~--~~~ 111 (366)
.|.+++|.|+ +|+|...+..+...|+. |+.+++++++++. .+++ |.+... |..+ .+.+.+.++. -+.
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l----Ga~~~i---~~~~~~~~~~~~~~~~~~~g 98 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF----GATECI---NPQDFSKPIQEVLIEMTDGG 98 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH----TCSEEE---CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh----CCcEEE---eCCchhhHHHHHHHHHcCCC
Confidence 5889999997 69999999999999965 7777787777554 3333 322211 2222 2234444433 257
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|++|.+.|.
T Consensus 99 ~D~vid~~G~ 108 (176)
T d2fzwa2 99 VDYSFECIGN 108 (176)
T ss_dssp BSEEEECSCC
T ss_pred CcEeeecCCC
Confidence 9999999983
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=95.95 E-value=0.019 Score=46.02 Aligned_cols=77 Identities=23% Similarity=0.299 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHH-HHHHHHh--cCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDA-VKTALDE--AGP 111 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~-v~~~~~~--~~~ 111 (366)
.|.+++|.|+ +|+|...+..+...|+ +|+.+++++++++.+.+ + |.+... |.++.+. +++..+. -+.
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~----GAd~~i---n~~~~~~~~~~~~~~~~~~G 98 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F----GATDFV---NPNDHSEPISQVLSKMTNGG 98 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T----TCCEEE---CGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c----CCcEEE---cCCCcchhHHHHHHhhccCC
Confidence 6889999985 7788888888888877 58889999888765432 2 332222 3322221 2222222 247
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|+++.+.|.
T Consensus 99 ~d~vid~~G~ 108 (175)
T d1cdoa2 99 VDFSLECVGN 108 (175)
T ss_dssp BSEEEECSCC
T ss_pred cceeeeecCC
Confidence 9999999984
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.91 E-value=0.065 Score=42.03 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=70.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh---cCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.++.|.|+ |.+|.++|..|..++. ++++.|++++.++....++... .+.+......| +. +....-|
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~-------~~~~~ad 73 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY-------DDLAGAD 73 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG-------GGGTTCS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc-------cccCCCc
Confidence 45777795 9999999998888874 6999999988777666555432 12232222221 11 2234689
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~ 174 (366)
++|.+||........+.+. +-...++.|. -+.+.+.+.+.+... .+.++++|.-
T Consensus 74 vvvitag~~~~~g~~~~~~-~R~~l~~~N~----~iv~~i~~~i~~~~p--~aivivvtNP 127 (150)
T d1t2da1 74 VVIVTAGFTKAPGKSDKEW-NRDDLLPLNN----KIMIEIGGHIKKNCP--NAFIIVVTNP 127 (150)
T ss_dssp EEEECCSCSSCTTCCSTTC-CGGGGHHHHH----HHHHHHHHHHHHHCT--TSEEEECSSS
T ss_pred EEEEecccccCCCCCcccc-chhHHHHHHH----HHHHHHHHHHHhcCC--CeEEEEecCc
Confidence 9999999754321111011 1122344453 455666666665542 4566666653
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.90 E-value=0.02 Score=46.08 Aligned_cols=59 Identities=25% Similarity=0.311 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 14 LPLTLLLLLYLIVRPKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
++|.-.-++.++.+ ...+++||.++|.|-|.-+|+-++..|+++|+.|..++.....+.
T Consensus 19 ~PcTp~aii~lL~~---~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~ 77 (170)
T d1a4ia1 19 IPCTPKGCLELIKE---TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD 77 (170)
T ss_dssp CCHHHHHHHHHHHT---TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred CCChHHHHHHHHHH---hCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence 45555555555543 245799999999999999999999999999999999988776544
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=95.89 E-value=0.0066 Score=49.05 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=37.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQ 79 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~ 79 (366)
+|++.|.|+ |.+|.++|..|+++|++|.+.+|++++.+...+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD 42 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 488999997 999999999999999999999999888776554
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.82 E-value=0.017 Score=46.32 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=39.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLE 75 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~ 75 (366)
..+++||+++|.|-|.-+|+-++..|.++|++|+.++.....++
T Consensus 32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~ 75 (166)
T d1b0aa1 32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR 75 (166)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence 45789999999999999999999999999999999987765544
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.57 E-value=0.043 Score=44.12 Aligned_cols=84 Identities=15% Similarity=0.081 Sum_probs=56.1
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCe-EEEEEecC--CCHHHHHHHHH
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIE-VATYSADV--RDFDAVKTALD 107 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~-v~~~~~Dl--s~~~~v~~~~~ 107 (366)
.-.+++||+++|.|-|.=+|+-+|..|+++|+.|..++.+..... ....... ......|+ -..+.+++...
T Consensus 23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~lk~~~~ 96 (171)
T d1edza1 23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF------TRGESLKLNKHHVEDLGEYSEDLLKKCSL 96 (171)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE------ESCCCSSCCCCEEEEEEECCHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccc------ccccceeeeeeccccccccchhHHhhccc
Confidence 345899999999999999999999999999999998876532100 0000000 00111122 34566777766
Q ss_pred hcCCCcEEEEcCCCCC
Q 017757 108 EAGPVDVLVVNQGVFV 123 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~ 123 (366)
..|++|..+|...
T Consensus 97 ---~aDIvIsavG~p~ 109 (171)
T d1edza1 97 ---DSDVVITGVPSEN 109 (171)
T ss_dssp ---HCSEEEECCCCTT
T ss_pred ---cCCEEEEccCCCc
Confidence 4799999988643
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.47 E-value=0.013 Score=46.40 Aligned_cols=117 Identities=13% Similarity=0.137 Sum_probs=61.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC-------eEEEEecCch--hHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA-------RVSILARSGK--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~-------~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
++.|+||+|.+|.+++..|++.+. .+.+.+.+.. .++....++............. ++. ..+ ..
T Consensus 5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~--~~~---~~ 77 (154)
T d5mdha1 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TDK--EEI---AF 77 (154)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ESC--HHH---HT
T ss_pred EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Ccc--ccc---cc
Confidence 789999999999999999997642 3555555443 2333333333221112211111 111 112 23
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
...|++|..||....... +.+ +.++.|. .+.+...+.+.+... ..+.++.+|.
T Consensus 78 ~~~dvVVitag~~~~~g~---sr~---dll~~N~----~i~k~~~~~i~k~a~-~~~~iivvsN 130 (154)
T d5mdha1 78 KDLDVAILVGSMPRRDGM---ERK---DLLKANV----KIFKCQGAALDKYAK-KSVKVIVVGN 130 (154)
T ss_dssp TTCSEEEECCSCCCCTTC---CTT---TTHHHHH----HHHHHHHHHHHHHSC-TTCEEEECSS
T ss_pred CCceEEEEecccCCCCCC---chh---HHHHHhH----HHHHHHHHHHHhhCC-CceEEEEecC
Confidence 368999999997644221 211 1334444 455566666655321 1345555553
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.41 E-value=0.016 Score=46.30 Aligned_cols=41 Identities=22% Similarity=0.248 Sum_probs=37.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
...+.||+++|.| .|.+|+.+|+.+...|++|++++.++.+
T Consensus 19 ~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~ 59 (163)
T d1li4a1 19 DVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPIN 59 (163)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccch
Confidence 5678999999999 5799999999999999999999998754
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.33 E-value=0.0095 Score=48.85 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=54.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh---------
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--------- 108 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--------- 108 (366)
|++.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+....... ..-.....+..+...+.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGR---VDKGRMTPAKMAEVLNGIRPTLSYGD 80 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHH---HTTTSSCHHHHHHHHHHEEEESSSTT
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhh---hcccccchhhhhhhhceeeccccccc
Confidence 56889997 889999999999999999999999988887766654321100 01122344555555543
Q ss_pred cCCCcEEEEcCC
Q 017757 109 AGPVDVLVVNQG 120 (366)
Q Consensus 109 ~~~id~vi~nAG 120 (366)
+...|++|-+..
T Consensus 81 ~~~adlViEav~ 92 (186)
T d1wdka3 81 FGNVDLVVEAVV 92 (186)
T ss_dssp GGGCSEEEECCC
T ss_pred ccccceeeeeec
Confidence 245688887654
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.12 E-value=0.019 Score=47.62 Aligned_cols=45 Identities=22% Similarity=0.335 Sum_probs=39.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA 77 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~ 77 (366)
..+++||+++|-| -|.+|..+|+.|.+.|++|++++.+...++..
T Consensus 22 ~~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~ 66 (201)
T d1c1da1 22 LGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA 66 (201)
T ss_dssp CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence 4579999999998 68899999999999999999999988766543
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.00 E-value=0.009 Score=47.04 Aligned_cols=38 Identities=18% Similarity=0.502 Sum_probs=34.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS 70 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~ 70 (366)
.++++||++||+|| |.+|..-++.|++.|++|++++..
T Consensus 8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45799999999998 779999999999999999999764
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=94.99 E-value=0.037 Score=43.87 Aligned_cols=40 Identities=23% Similarity=0.249 Sum_probs=33.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHH
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQ 79 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~ 79 (366)
++.|.|. |-+|..+|+.|.++|++|++.+|+++..+++.+
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~ 41 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE 41 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH
Confidence 3667764 999999999999999999999999887776544
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=94.95 E-value=0.54 Score=41.22 Aligned_cols=118 Identities=19% Similarity=0.204 Sum_probs=73.0
Q ss_pred CCCCEEEEEcC-CChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 35 IKDRHVFITGG-SSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 35 l~gk~vLITGa-s~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
.+|++||=.++ +|+++.++ +..+.+|+.++.++..++.+.+.+....-.++.++..|..+.. +.+.+.-++.|
T Consensus 144 ~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~--~~~~~~~~~fD 217 (318)
T d1wxxa2 144 FRGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLL--RRLEKEGERFD 217 (318)
T ss_dssp CCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHH--HHHHHTTCCEE
T ss_pred hCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHh--hhhHhhhcCCC
Confidence 47899996654 45555443 4457789999999999888887776543346888888765432 33444446899
Q ss_pred EEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 114 ~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
.||.++........ ..... ......+++.+.+.+++ .|.+++.|.
T Consensus 218 ~Vi~DpP~~~~~~~---~~~~~-------~~~~~~l~~~a~~lLkp-----GG~Lv~~sc 262 (318)
T d1wxxa2 218 LVVLDPPAFAKGKK---DVERA-------YRAYKEVNLRAIKLLKE-----GGILATASC 262 (318)
T ss_dssp EEEECCCCSCCSTT---SHHHH-------HHHHHHHHHHHHHTEEE-----EEEEEEEEC
T ss_pred EEEEcCCccccchH---HHHHH-------HHHHHHHHHHHHHHcCC-----CCEEEEEeC
Confidence 99999865443221 11111 11233455666666655 466665554
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.91 E-value=0.22 Score=38.37 Aligned_cols=112 Identities=13% Similarity=0.081 Sum_probs=67.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHHHHHhh---cCCeEEEEE-ecCCCHHHHHHHHHhcCCC
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQSIQLA---TGIEVATYS-ADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~-~Dls~~~~v~~~~~~~~~i 112 (366)
++.|+|+ |.+|.++|..++.+|. +++++|++++.++....++... .+....... .|. +....-
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~----------~~~~~a 70 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY----------SLLKGS 70 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG----------GGGTTC
T ss_pred EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH----------HHhccc
Confidence 4667786 9999999999999874 6999999988776555555432 122222222 221 123468
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecC
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS 173 (366)
|++|..||...... .+. .+.+..| ..+.+...+.+.+... .+.++.+|.
T Consensus 71 diVvitag~~~~~g---~~r---~~l~~~n----~~i~~~i~~~i~~~~p--~aivivvtN 119 (142)
T d1ojua1 71 EIIVVTAGLARKPG---MTR---LDLAHKN----AGIIKDIAKKIVENAP--ESKILVVTN 119 (142)
T ss_dssp SEEEECCCCCCCSS---CCH---HHHHHHH----HHHHHHHHHHHHTTST--TCEEEECSS
T ss_pred cEEEEeccccCCCC---Cch---HHHHHHh----hHHHHHHHHHHHhhCC--CcEEEEecC
Confidence 99999999654321 232 2233333 3455666666666442 456666655
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=94.50 E-value=0.027 Score=46.52 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=36.5
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
....+.||++.|.| .|.||+.+|+.+..-|++|+..++....
T Consensus 37 ~g~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~ 78 (197)
T d1j4aa1 37 IGREVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNP 78 (197)
T ss_dssp CBCCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred cCccccCCeEEEec-ccccchhHHHhHhhhcccccccCccccc
Confidence 34578999999999 5999999999999999999999876543
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.49 E-value=0.23 Score=40.20 Aligned_cols=41 Identities=20% Similarity=0.167 Sum_probs=35.2
Q ss_pred CCCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 30 ~~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
.....++++++.|.| .|.||+.+|+.+..-|++|+..++..
T Consensus 37 ~~~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d1sc6a1 37 AGSFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN 77 (188)
T ss_dssp --CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred cccccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence 345578999999997 69999999999999999999998864
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=94.47 E-value=0.099 Score=38.70 Aligned_cols=72 Identities=17% Similarity=0.205 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
..+.++.|.| +|-+|+-++....+.|+++++.+.+++.-.. ...-.++..|..|.+.+.++.++. .+|+
T Consensus 9 ~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~---------~va~~~i~~~~~d~~~l~~~~~~~-~~Dv 77 (111)
T d1kjqa2 9 PAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM---------HVAHRSHVINMLDGDALRRVVELE-KPHY 77 (111)
T ss_dssp TTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG---------GGSSEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred CCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh---------hcCCeEEECCCCCHHHHHHHHHhh-CCce
Confidence 3556899999 5889999999999999999999988653111 112356789999999999998764 5788
Q ss_pred EEE
Q 017757 115 LVV 117 (366)
Q Consensus 115 vi~ 117 (366)
+..
T Consensus 78 iT~ 80 (111)
T d1kjqa2 78 IVP 80 (111)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.18 E-value=0.028 Score=42.78 Aligned_cols=71 Identities=21% Similarity=0.232 Sum_probs=52.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEEE
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi~ 117 (366)
|.++|.|. |.+|+.+++.| +|.+|++++.+++..+.... ..+.++.+|.++++.++++ ...+.+.+|.
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~-------~~~~~i~Gd~~~~~~L~~a--~i~~A~~vi~ 68 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKA--NVRGARAVIV 68 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH-------TTCEEEESCTTSHHHHHHT--TCTTCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh-------cCccccccccCCHHHHHHh--hhhcCcEEEE
Confidence 56888885 88999999999 46678889998887655422 2466788999999877774 2346788887
Q ss_pred cCC
Q 017757 118 NQG 120 (366)
Q Consensus 118 nAG 120 (366)
+..
T Consensus 69 ~~~ 71 (129)
T d2fy8a1 69 NLE 71 (129)
T ss_dssp CCS
T ss_pred ecc
Confidence 653
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=94.11 E-value=0.086 Score=41.12 Aligned_cols=77 Identities=19% Similarity=0.289 Sum_probs=51.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCC-CeEEEEecCchhHHHHHHHHHhhc--------CCeEEEEEecCCCHHHHHHHHHhc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEG-ARVSILARSGKKLEEAKQSIQLAT--------GIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G-~~V~l~~r~~~~~~~~~~~l~~~~--------~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
++.+.|+ |-+|.++++.|.+.| ++|.+.+|++++.++..++..-.. ..++.++. ..+++++++++++
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~v~~~Div~la---vkP~~~~~v~~~l 77 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELHSDDVLILA---VKPQDMEAACKNI 77 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCCTTSEEEEC---SCHHHHHHHHTTC
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccccccccceEEEe---cCHHHHHHhHHHH
Confidence 3667775 999999999999887 889999999988887766542110 12333333 2377888888776
Q ss_pred CCC-cEEEEcC
Q 017757 110 GPV-DVLVVNQ 119 (366)
Q Consensus 110 ~~i-d~vi~nA 119 (366)
..- ..+|..+
T Consensus 78 ~~~~~~viS~~ 88 (152)
T d1yqga2 78 RTNGALVLSVA 88 (152)
T ss_dssp CCTTCEEEECC
T ss_pred hhcccEEeecc
Confidence 433 3455543
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=94.03 E-value=0.06 Score=45.39 Aligned_cols=76 Identities=12% Similarity=0.111 Sum_probs=58.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
..+++++|=.|++.|. ++..|+++|.+|+.++.+++-++.+.+..... +.++.++..|+.+.+ -.+++|
T Consensus 35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~-~~~v~~~~~d~~~~~-------~~~~fD 103 (246)
T d1y8ca_ 35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ-GLKPRLACQDISNLN-------INRKFD 103 (246)
T ss_dssp TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT-TCCCEEECCCGGGCC-------CSCCEE
T ss_pred CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc-Cccceeeccchhhhc-------cccccc
Confidence 4567899999988885 77888999999999999998888777666543 557889999886532 124789
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
++++..+
T Consensus 104 ~i~~~~~ 110 (246)
T d1y8ca_ 104 LITCCLD 110 (246)
T ss_dssp EEEECTT
T ss_pred ccceeee
Confidence 9987644
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=94.01 E-value=0.57 Score=36.99 Aligned_cols=121 Identities=12% Similarity=0.131 Sum_probs=65.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHC-----CCeEEEEecCchhHHHHHHHHHh---hcCCeEEEE-EecCCCHHHHHHHHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKE-----GARVSILARSGKKLEEAKQSIQL---ATGIEVATY-SADVRDFDAVKTALD 107 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~-----G~~V~l~~r~~~~~~~~~~~l~~---~~~~~v~~~-~~Dls~~~~v~~~~~ 107 (366)
..++.|.||++.-...+...++.+ +.+|+++|.++++++...+.+.. ..+...... ..| .++.++
T Consensus 3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~~eal~ 76 (167)
T d1u8xx1 3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTD------PEEAFT 76 (167)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESC------HHHHHS
T ss_pred CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCC------hhhccC
Confidence 345777787654333333444432 24799999999988754444432 223222222 222 223333
Q ss_pred hcCCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHhccCCCCcEEEEe
Q 017757 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNI----------------TGSFHMIKAALPLIKKRQNGGPASIALM 171 (366)
Q Consensus 108 ~~~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~----------------~~~~~l~~~~~~~l~~~~~~~~g~iv~v 171 (366)
.-|+||+.||.... ...+-++.+..|+ .-..-+++.+.+.+++... .+-++++
T Consensus 77 ---~AD~Vvitag~~~~------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P--~A~li~~ 145 (167)
T d1u8xx1 77 ---DVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSP--DAWMLNY 145 (167)
T ss_dssp ---SCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT--TCEEEEC
T ss_pred ---CCCEEEECCCcCCC------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCC--CeEEEEe
Confidence 78999999997422 2222233344442 2234556666776766552 4567766
Q ss_pred cCC
Q 017757 172 SSQ 174 (366)
Q Consensus 172 sS~ 174 (366)
|--
T Consensus 146 TNP 148 (167)
T d1u8xx1 146 SNP 148 (167)
T ss_dssp CSC
T ss_pred CCH
Confidence 653
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=93.96 E-value=0.028 Score=44.31 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
+++|.|+ |.+|..++..|++.|++|.+++|++..
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~ 35 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP 35 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence 5788887 999999999999999999999998764
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=93.94 E-value=0.12 Score=43.74 Aligned_cols=82 Identities=21% Similarity=0.313 Sum_probs=56.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEEE
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVAT 91 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~~ 91 (366)
.+|++++|+|.| .||+|..++..|+..|. +++++|.+. .+.+.+++.+.+.. ..++..
T Consensus 26 ~kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~ 104 (247)
T d1jw9b_ 26 EALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP 104 (247)
T ss_dssp HHHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhh
Confidence 358899999999 59999999999999997 588887542 34555666665543 234555
Q ss_pred EEecCCCHHHHHHHHHhcCCCcEEEEcC
Q 017757 92 YSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (366)
Q Consensus 92 ~~~Dls~~~~v~~~~~~~~~id~vi~nA 119 (366)
+...++ .+......+ ..|++|.+.
T Consensus 105 ~~~~~~-~~~~~~~~~---~~divid~~ 128 (247)
T d1jw9b_ 105 VNALLD-DAELAALIA---EHDLVLDCT 128 (247)
T ss_dssp ECSCCC-HHHHHHHHH---TSSEEEECC
T ss_pred hhhhhh-hcccccccc---ccceeeecc
Confidence 544443 333444444 578888765
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=93.89 E-value=0.14 Score=40.80 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=36.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHH
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQS 80 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~ 80 (366)
.++-|.| -|-+|..+|+.|+++|++|++.+|++++.++..++
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~ 44 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN 44 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT
T ss_pred CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh
Confidence 4577788 49999999999999999999999999988876543
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.76 E-value=0.17 Score=39.34 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=35.2
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHH
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI 81 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l 81 (366)
+.+.| +|-+|.++++.|.+.|+++++.+|+.++.++..++.
T Consensus 3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~ 43 (152)
T d2ahra2 3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL 43 (152)
T ss_dssp EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence 55666 699999999999999999999999998888776655
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.74 E-value=0.066 Score=45.11 Aligned_cols=48 Identities=17% Similarity=0.230 Sum_probs=42.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHH
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQS 80 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~ 80 (366)
..+++||+++|-| -|-+|..+|+.|.+.|++|+.++.+...++....+
T Consensus 34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~ 81 (230)
T d1leha1 34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE 81 (230)
T ss_dssp SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence 4679999999999 68999999999999999999999988777665554
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.62 E-value=0.23 Score=40.60 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=57.3
Q ss_pred CcCCCCCEEEEEcCCCh-hHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 32 RIPIKDRHVFITGGSSG-IGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 32 ~~~l~gk~vLITGas~g-IG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
..+++|+++|=.|++.| ++. .++.+|+ +|+.++.++..++.+.+.+... +.+..++..|+.+. .
T Consensus 42 ~~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~-~~~~~~~~~d~~~~---------~ 107 (201)
T d1wy7a1 42 LGDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEF-KGKFKVFIGDVSEF---------N 107 (201)
T ss_dssp TTSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGG-TTSEEEEESCGGGC---------C
T ss_pred cCCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHc-CCCceEEECchhhh---------C
Confidence 35689999998887665 443 3456775 7999999998888877766543 66788888886442 3
Q ss_pred CCCcEEEEcCCCC
Q 017757 110 GPVDVLVVNQGVF 122 (366)
Q Consensus 110 ~~id~vi~nAG~~ 122 (366)
+++|+||.|.-+.
T Consensus 108 ~~fD~Vi~nPP~~ 120 (201)
T d1wy7a1 108 SRVDIVIMNPPFG 120 (201)
T ss_dssp CCCSEEEECCCCS
T ss_pred CcCcEEEEcCccc
Confidence 5799999998653
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=93.53 E-value=0.24 Score=40.48 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=36.1
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
....+.||++.|.| .|.||+++|+.+..-|++|+..++...
T Consensus 39 ~~~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 79 (199)
T d1dxya1 39 IGKELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM 79 (199)
T ss_dssp CCCCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccccccceeeeeee-cccccccccccccccceeeeccCCccc
Confidence 34678999999999 589999999999999999999998643
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=93.42 E-value=0.077 Score=41.85 Aligned_cols=39 Identities=15% Similarity=0.225 Sum_probs=33.5
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHH
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQ 79 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~ 79 (366)
+-|.| .|-+|..+|+.|+++|++|++.+|++++.++..+
T Consensus 3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~ 41 (161)
T d1vpda2 3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA 41 (161)
T ss_dssp EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence 56666 5999999999999999999999999887776544
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.41 E-value=0.063 Score=42.48 Aligned_cols=40 Identities=13% Similarity=0.245 Sum_probs=33.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHH
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAK 78 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~ 78 (366)
+++-+.| .|-+|.++|++|+++|++|.+.+|++++.+...
T Consensus 2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~ 41 (162)
T d3cuma2 2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV 41 (162)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence 3567776 699999999999999999999999988766554
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.36 E-value=0.06 Score=40.51 Aligned_cols=36 Identities=33% Similarity=0.552 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
++|+++|.|| |.+|.++|..|+++|.+|.++.+.+.
T Consensus 29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence 3688999985 99999999999999999999998764
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.24 E-value=0.07 Score=40.18 Aligned_cols=36 Identities=25% Similarity=0.369 Sum_probs=31.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
-++|+++|.|| |.+|.++|..|++.|.+|+++.+..
T Consensus 28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence 35788999985 8999999999999999999998865
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.21 E-value=0.12 Score=41.83 Aligned_cols=42 Identities=24% Similarity=0.154 Sum_probs=36.6
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
....+.||++.|.| .|.||+++++.+..-|++|+..++...+
T Consensus 38 ~~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~ 79 (184)
T d1ygya1 38 SGTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP 79 (184)
T ss_dssp CBCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred ccccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence 44568999999999 5999999999999999999999987654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=93.09 E-value=0.041 Score=44.97 Aligned_cols=42 Identities=17% Similarity=0.258 Sum_probs=35.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHH
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQS 80 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~ 80 (366)
+++.|.|| |..|.++|..|++.|++|.+.+|+++..++..+.
T Consensus 8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~ 49 (189)
T d1n1ea2 8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK 49 (189)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence 46889996 7789999999999999999999998776655443
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=93.07 E-value=0.19 Score=40.99 Aligned_cols=41 Identities=22% Similarity=0.138 Sum_probs=36.0
Q ss_pred CCcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 31 ~~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
....++||++.|.| -|.||+++|+.+..-|++|+..++...
T Consensus 43 ~~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 83 (193)
T d1mx3a1 43 GAARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS 83 (193)
T ss_dssp TCCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred CceeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence 34669999999998 599999999999999999999988644
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=93.03 E-value=0.27 Score=39.69 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=35.6
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
...++++++.|.| .|.||+++++.+..-|.+|...++...
T Consensus 39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 78 (188)
T d2naca1 39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRL 78 (188)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred ceeccccceeecc-ccccchhhhhhhhccCceEEEEeeccc
Confidence 4578999999999 589999999999999999999998643
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.95 E-value=0.2 Score=36.90 Aligned_cols=35 Identities=31% Similarity=0.582 Sum_probs=31.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
.|.++|.|| |-+|.++|..|++.|.+|+++.|...
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence 378999995 99999999999999999999998764
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=92.87 E-value=0.19 Score=41.57 Aligned_cols=81 Identities=27% Similarity=0.221 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+|.+||-.|+++|--.++..++...+.+|+.++.+++.++.+.+.+....-.++.++..|..+. ....+++|.+
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~------~~~~~~fD~I 148 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG------VPEFSPYDVI 148 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC------CGGGCCEEEE
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc------cccccchhhh
Confidence 4789999998888777766666666779999999999988888888766556777777775431 1223578999
Q ss_pred EEcCCCC
Q 017757 116 VVNQGVF 122 (366)
Q Consensus 116 i~nAG~~ 122 (366)
+.+++..
T Consensus 149 ~~~~~~~ 155 (213)
T d1dl5a1 149 FVTVGVD 155 (213)
T ss_dssp EECSBBS
T ss_pred hhhccHH
Confidence 9988753
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=92.78 E-value=2.7 Score=36.41 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=56.7
Q ss_pred CCCEEEEE-cCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 36 KDRHVFIT-GGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 36 ~gk~vLIT-Gas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
+|+++|=. .++|+++.+ ++..|+ +|+.++.++..++.+.+.++... ..++.+++.|+- +.++.+.++..+
T Consensus 144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~--~~l~~~~~~~~~ 217 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF--DYFKYARRHHLT 217 (317)
T ss_dssp BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH--HHHHHHHHTTCC
T ss_pred CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH--HHHHHHHhhcCC
Confidence 58888855 455666544 345677 59999999988888777665432 246888998864 345555666668
Q ss_pred CcEEEEcCCCCC
Q 017757 112 VDVLVVNQGVFV 123 (366)
Q Consensus 112 id~vi~nAG~~~ 123 (366)
.|+||..+-...
T Consensus 218 fD~Ii~DPP~f~ 229 (317)
T d2b78a2 218 YDIIIIDPPSFA 229 (317)
T ss_dssp EEEEEECCCCC-
T ss_pred CCEEEEcChhhc
Confidence 999999976443
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.74 E-value=0.78 Score=37.09 Aligned_cols=38 Identities=21% Similarity=0.177 Sum_probs=32.2
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHH
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAK 78 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~ 78 (366)
+.|.| .|-+|..+|..|+++|++|++.|.++++.+++.
T Consensus 3 I~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln 40 (202)
T d1mv8a2 3 ISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN 40 (202)
T ss_dssp EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence 55665 699999999999999999999999987766543
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=92.69 E-value=0.079 Score=43.53 Aligned_cols=72 Identities=29% Similarity=0.318 Sum_probs=52.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
.+++||+||=.|+++|+ ++..++..|+ +|+.++.++..++.+.+.+ .++.++.+|+.+. -++
T Consensus 45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-----~~~~~~~~D~~~l---------~~~ 107 (197)
T d1ne2a_ 45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-----GGVNFMVADVSEI---------SGK 107 (197)
T ss_dssp TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-----TTSEEEECCGGGC---------CCC
T ss_pred CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-----ccccEEEEehhhc---------CCc
Confidence 56899999999988773 3345666775 5999999988776554433 3577888888542 257
Q ss_pred CcEEEEcCCC
Q 017757 112 VDVLVVNQGV 121 (366)
Q Consensus 112 id~vi~nAG~ 121 (366)
+|+||.|.-+
T Consensus 108 fD~Vi~NPPf 117 (197)
T d1ne2a_ 108 YDTWIMNPPF 117 (197)
T ss_dssp EEEEEECCCC
T ss_pred ceEEEeCccc
Confidence 9999999754
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.64 E-value=0.26 Score=40.11 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++.+||=.|++.|. ++..|++.|++|+.++.+++-++.+.+..... +..+..+..|..+.. ...+..|+|
T Consensus 37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~-~~~~~~~~~d~~~l~------~~~~~fD~I 106 (226)
T d1ve3a1 37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR-ESNVEFIVGDARKLS------FEDKTFDYV 106 (226)
T ss_dssp SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCCEEEECCTTSCC------SCTTCEEEE
T ss_pred CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc-ccccccccccccccc------ccCcCceEE
Confidence 34678999988876 66788899999999999988888777666554 456777888876522 112478999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
+++..+
T Consensus 107 ~~~~~l 112 (226)
T d1ve3a1 107 IFIDSI 112 (226)
T ss_dssp EEESCG
T ss_pred EEecch
Confidence 887653
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.62 E-value=0.058 Score=49.90 Aligned_cols=80 Identities=19% Similarity=0.319 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc-------------------hhHHHHHHHHHhhc-CCeEEEEE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------KKLEEAKQSIQLAT-GIEVATYS 93 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~~~~ 93 (366)
|++.+|||.|+ ||+|.++++.|+..|. ++.++|.+. .+.+.+++.++... ..++..+.
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 113 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF 113 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence 56778999997 8899999999999998 688987652 23455555555543 34666666
Q ss_pred ecCCCHHHHHHHHHhcCCCcEEEEcCC
Q 017757 94 ADVRDFDAVKTALDEAGPVDVLVVNQG 120 (366)
Q Consensus 94 ~Dls~~~~v~~~~~~~~~id~vi~nAG 120 (366)
.++.+.. .++++ ..|+||.+..
T Consensus 114 ~~i~~~~--~~~~~---~~DlVi~~~D 135 (426)
T d1yovb1 114 NKIQDFN--DTFYR---QFHIIVCGLD 135 (426)
T ss_dssp SCGGGBC--HHHHT---TCSEEEECCS
T ss_pred ccccchH--HHHHH---hcchheeccC
Confidence 6665433 23444 6788887764
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.52 E-value=0.19 Score=41.65 Aligned_cols=79 Identities=23% Similarity=0.265 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+|.+||..|+++|--.++..+++ |.+|+.+.++++-.+.+.+.+....-.++.++..|..+ -....++.|.+
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~------g~~~~~pfD~I 149 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK------GFPPKAPYDVI 149 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG------CCGGGCCEEEE
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECcccc------CCcccCcceeE
Confidence 47799999999998888888887 56799999998887877777776655789999999753 12334689999
Q ss_pred EEcCCCC
Q 017757 116 VVNQGVF 122 (366)
Q Consensus 116 i~nAG~~ 122 (366)
+.+++..
T Consensus 150 iv~~a~~ 156 (215)
T d1jg1a_ 150 IVTAGAP 156 (215)
T ss_dssp EECSBBS
T ss_pred Eeecccc
Confidence 9988864
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.35 E-value=0.4 Score=42.20 Aligned_cols=119 Identities=18% Similarity=0.253 Sum_probs=74.1
Q ss_pred CCCEEEEEcC-CChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 36 KDRHVFITGG-SSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 36 ~gk~vLITGa-s~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
+|++||=.++ +|+++.++ +..|+ +|+.++.++..++.+.+.+.... ..++.++..|+.+ .+..+..+-.++
T Consensus 145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~--~~~~~~~~~~~f 218 (324)
T d2as0a2 145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE--EMEKLQKKGEKF 218 (324)
T ss_dssp TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH--HHHHHHHTTCCE
T ss_pred CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh--hhHHHHhccCCC
Confidence 4888886664 45555544 45566 69999999998888877665442 2467888877643 344555555689
Q ss_pred cEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCc
Q 017757 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (366)
Q Consensus 113 d~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~ 175 (366)
|+||.++....... ++... -......+++.+.+.+++ .|.+++.|...
T Consensus 219 D~Vi~DpP~~~~~~------~~~~~----~~~~y~~l~~~a~~ll~p-----GG~lv~~s~s~ 266 (324)
T d2as0a2 219 DIVVLDPPAFVQHE------KDLKA----GLRAYFNVNFAGLNLVKD-----GGILVTCSCSQ 266 (324)
T ss_dssp EEEEECCCCSCSSG------GGHHH----HHHHHHHHHHHHHTTEEE-----EEEEEEEECCT
T ss_pred CchhcCCccccCCH------HHHHH----HHHHHHHHHHHHHHHcCC-----CcEEEEEeCCc
Confidence 99999986544321 11111 122334466666666655 56777766544
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=92.29 E-value=0.11 Score=40.95 Aligned_cols=41 Identities=17% Similarity=0.265 Sum_probs=33.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCchhHHHHHH
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGKKLEEAKQ 79 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~~~~~~~~~ 79 (366)
|+++|.| .|-||..+|+.|.+.|. +|+..+++++.++.+.+
T Consensus 2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~ 44 (171)
T d2g5ca2 2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD 44 (171)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence 4688888 59999999999999996 68888999877666544
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.25 E-value=0.21 Score=37.36 Aligned_cols=34 Identities=24% Similarity=0.445 Sum_probs=30.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
.|.++|.|| |-||.++|..|++.|.+|.++.+++
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence 478999995 8999999999999999999998865
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=92.25 E-value=0.087 Score=42.15 Aligned_cols=41 Identities=29% Similarity=0.348 Sum_probs=35.4
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHH
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSI 81 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l 81 (366)
+-|.| .|-+|.++|++|+++|++|.+.+|++++.+++.++-
T Consensus 4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~ 44 (178)
T d1pgja2 4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN 44 (178)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence 55565 799999999999999999999999999888776654
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=92.23 E-value=0.17 Score=38.43 Aligned_cols=71 Identities=13% Similarity=0.187 Sum_probs=51.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEE-EecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSI-LARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVL 115 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~v 115 (366)
++.|.|++|-+|+++++.+.++|++++. .+++.... + ...+ +..|+|.++.+.+.++.. .++.+|
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~---~~~D---VvIDFS~p~~~~~~l~~~~~~~~p~V 69 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L---DSPD---VVIDFSSPEALPKTVDLCKKYRAGLV 69 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C---SCCS---EEEECSCGGGHHHHHHHHHHHTCEEE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h---ccCC---EEEEecCHHHHHHHHHHHHhcCCCEE
Confidence 4889999999999999999999998764 45443210 0 1223 456999999988877653 357788
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
+-..|.
T Consensus 70 iGTTG~ 75 (128)
T d1vm6a3 70 LGTTAL 75 (128)
T ss_dssp ECCCSC
T ss_pred EEcCCC
Confidence 888885
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=92.14 E-value=0.41 Score=38.43 Aligned_cols=42 Identities=21% Similarity=0.192 Sum_probs=36.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHH
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQ 79 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~ 79 (366)
.-.++|.|| |-.|++.++-...-|++|.+.|.+.++++++.+
T Consensus 29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~ 70 (183)
T d1l7da1 29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES 70 (183)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence 447999996 778999999999999999999999988777654
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.13 E-value=0.26 Score=36.89 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=30.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
|.++|.|| |-||.++|..|++.|.+|+++.|+.
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence 78999996 7899999999999999999999974
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=91.91 E-value=0.098 Score=43.52 Aligned_cols=34 Identities=38% Similarity=0.486 Sum_probs=30.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
.|.|+|.|| |-.|.++|.+|+++|++|++++|+.
T Consensus 6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 457999995 8889999999999999999999864
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=91.87 E-value=0.14 Score=41.22 Aligned_cols=37 Identities=24% Similarity=0.487 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
.-+.|.++|.|| |--|.+.|..|+++|++|++..+++
T Consensus 40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence 456899999995 7889999999999999999999875
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=91.79 E-value=0.23 Score=40.44 Aligned_cols=82 Identities=20% Similarity=0.288 Sum_probs=62.6
Q ss_pred CCCEEE-EEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh--cCCC
Q 017757 36 KDRHVF-ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPV 112 (366)
Q Consensus 36 ~gk~vL-ITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~--~~~i 112 (366)
.|.+++ +|-|+||.-.++.+++ . +.+|+.+|++++.++.+.+.+.. ++.++.++..+.++.+ ...+. .+++
T Consensus 23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~-~~~r~~~~~~~f~~~~---~~~~~~~~~~v 96 (192)
T d1m6ya2 23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKE-FSDRVSLFKVSYREAD---FLLKTLGIEKV 96 (192)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGG-GTTTEEEEECCGGGHH---HHHHHTTCSCE
T ss_pred CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcc-ccccccchhHHHhhHH---HHHHHcCCCCc
Confidence 344544 7888899999998887 3 56899999999998888777754 3678999998887654 44444 3689
Q ss_pred cEEEEcCCCCC
Q 017757 113 DVLVVNQGVFV 123 (366)
Q Consensus 113 d~vi~nAG~~~ 123 (366)
|.++.--|++.
T Consensus 97 dgIl~DlGvSs 107 (192)
T d1m6ya2 97 DGILMDLGVST 107 (192)
T ss_dssp EEEEEECSCCH
T ss_pred ceeeeccchhH
Confidence 99999999853
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=91.78 E-value=0.097 Score=39.21 Aligned_cols=35 Identities=34% Similarity=0.506 Sum_probs=31.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
+|.++|.|| |.+|.++|..|++.|.+|+++.|++.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 478888885 99999999999999999999998753
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=91.36 E-value=0.091 Score=44.40 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=30.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
+|+|+|+|| |-=|.+.|.+|+++|++|+++.++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 689999996 6679999999999999999998764
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=91.30 E-value=0.15 Score=37.85 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
.+|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence 4789999985 99999999999999999999998753
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=91.28 E-value=0.17 Score=40.22 Aligned_cols=77 Identities=10% Similarity=0.010 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh------------cCCeEEEEEecCCCHHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA------------TGIEVATYSADVRDFDAVK 103 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~------------~~~~v~~~~~Dls~~~~v~ 103 (366)
+|.+||..|++.| ..+..|+++|++|+.++.++.-++.+.+..... .+..+.++..|..+.....
T Consensus 20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 96 (201)
T d1pjza_ 20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 96 (201)
T ss_dssp TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence 6889999998877 477799999999999999999888877765432 1234466777776633211
Q ss_pred HHHHhcCCCcEEEEcCC
Q 017757 104 TALDEAGPVDVLVVNQG 120 (366)
Q Consensus 104 ~~~~~~~~id~vi~nAG 120 (366)
....|.++....
T Consensus 97 -----~~~~D~i~~~~~ 108 (201)
T d1pjza_ 97 -----IGHCAAFYDRAA 108 (201)
T ss_dssp -----HHSEEEEEEESC
T ss_pred -----ccceeEEEEEee
Confidence 114576665443
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=91.19 E-value=0.13 Score=38.03 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=30.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
|.++|.|| |-+|.++|..|.+.|.+|.++.|.+
T Consensus 22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence 67888885 9999999999999999999999975
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=91.17 E-value=0.28 Score=39.82 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=35.7
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
...++||++.|.| -|.||+++|+.+..-|.+|+..++....
T Consensus 42 ~~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~ 82 (191)
T d1gdha1 42 GEKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRAS 82 (191)
T ss_dssp BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred cceecccceEEee-cccchHHHHHHHHhhccccccccccccc
Confidence 4567899999999 5999999999999999999999886543
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=91.11 E-value=0.12 Score=38.44 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=30.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
.|+++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence 478899985 8999999999999999999999864
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.10 E-value=0.34 Score=42.19 Aligned_cols=76 Identities=26% Similarity=0.283 Sum_probs=52.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
..+||+||-.|++.|+ ++..+++.|+ +|+.++.++.. ..+.+..... ...++.++..|+.+.. ....+
T Consensus 33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~------~~~~~ 102 (311)
T d2fyta1 33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVH------LPVEK 102 (311)
T ss_dssp GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSC------CSCSC
T ss_pred cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhc------Ccccc
Confidence 4689999999988875 5667777887 69999988653 3333333332 2457888998877632 11247
Q ss_pred CcEEEEcC
Q 017757 112 VDVLVVNQ 119 (366)
Q Consensus 112 id~vi~nA 119 (366)
+|+++..-
T Consensus 103 ~D~Ivse~ 110 (311)
T d2fyta1 103 VDVIISEW 110 (311)
T ss_dssp EEEEEECC
T ss_pred ceEEEEee
Confidence 89998753
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.10 E-value=0.098 Score=41.89 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=30.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCe-EEEEecCch
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGK 72 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~-V~l~~r~~~ 72 (366)
+|+|+|.|| |-.|...|..|+++|++ |+++.|+..
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 688999995 88999999999999985 999998754
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=90.85 E-value=0.19 Score=41.83 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=34.1
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
...-.+|.++|.|| |--|...|.+|+++|++|+++.++..
T Consensus 44 ~~~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 44 RQTKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CCCSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 34457899999996 77799999999999999999988653
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=90.65 E-value=0.24 Score=36.71 Aligned_cols=35 Identities=29% Similarity=0.345 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
..+.++|.|| |-||.++|..|++.|.+|.++.++.
T Consensus 21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence 3588999995 9999999999999999999998865
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=90.59 E-value=0.41 Score=38.37 Aligned_cols=38 Identities=29% Similarity=0.324 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 34 ~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
.++||++.|.|. |.||+.+++.+..-|++|+..+|++.
T Consensus 39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~ 76 (181)
T d1qp8a1 39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK 76 (181)
T ss_dssp CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence 589999999995 67999999999999999999998764
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=90.57 E-value=0.67 Score=39.22 Aligned_cols=73 Identities=26% Similarity=0.296 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
.+|+++|=.|+++|+ ++..+++.|++|+.++.++..++.+.+..+.. +.++.++..|+.+ . ...++.|.
T Consensus 119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n-~~~~~~~~~d~~~------~-~~~~~fD~ 187 (254)
T d2nxca1 119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN-GVRPRFLEGSLEA------A-LPFGPFDL 187 (254)
T ss_dssp CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT-TCCCEEEESCHHH------H-GGGCCEEE
T ss_pred CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc-CCceeEEeccccc------c-ccccccch
Confidence 468899999988886 33456778999999999999988887766543 5566777776421 1 12357899
Q ss_pred EEEc
Q 017757 115 LVVN 118 (366)
Q Consensus 115 vi~n 118 (366)
++.|
T Consensus 188 V~an 191 (254)
T d2nxca1 188 LVAN 191 (254)
T ss_dssp EEEE
T ss_pred hhhc
Confidence 9987
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.48 E-value=0.41 Score=36.52 Aligned_cols=74 Identities=19% Similarity=0.182 Sum_probs=50.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHC-CCeEE-EEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc--CCCcE
Q 017757 39 HVFITGGSSGIGLALAHQAAKE-GARVS-ILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDV 114 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~-G~~V~-l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~--~~id~ 114 (366)
++.|.|++|-+|+++++.+.+. +.+++ .+++.. .+.... . .+.+ +..|+|.++.+.+.++.. .++.+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~~~----~-~~~D---vvIDFS~p~~~~~~~~~~~~~~~~~ 71 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSLLT----D-GNTE---VVIDFTHPDVVMGNLEFLIDNGIHA 71 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHHHH----T-TTCS---EEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhhhc----c-ccCC---EEEEcccHHHHHHHHHHHHhcCCCE
Confidence 4789999999999999988775 56654 344432 222211 1 1223 457999999888777653 46778
Q ss_pred EEEcCCC
Q 017757 115 LVVNQGV 121 (366)
Q Consensus 115 vi~nAG~ 121 (366)
|+-..|.
T Consensus 72 ViGTTG~ 78 (135)
T d1yl7a1 72 VVGTTGF 78 (135)
T ss_dssp EECCCCC
T ss_pred EEecccc
Confidence 8888885
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.43 E-value=0.09 Score=42.33 Aligned_cols=76 Identities=20% Similarity=0.251 Sum_probs=47.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC---CeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG---IEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~---~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++.|.|+ |..|.++|..|++.|.+|.+.+|..+. +..+.+..... ........++.-.++.+++++ ..|++
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~ad~I 75 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE---NAEVV 75 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT---TCSEE
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhhhhhhhhhcchhccccccccccHHHHHh---ccchh
Confidence 4678885 889999999999999999999986542 33344433211 011111122333455666666 57988
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
|.+..
T Consensus 76 i~avp 80 (180)
T d1txga2 76 LLGVS 80 (180)
T ss_dssp EECSC
T ss_pred hcccc
Confidence 88653
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=90.42 E-value=3.5 Score=32.90 Aligned_cols=145 Identities=13% Similarity=0.049 Sum_probs=81.4
Q ss_pred CCCCCEEEEEcCC--ChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCC
Q 017757 34 PIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (366)
Q Consensus 34 ~l~gk~vLITGas--~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 111 (366)
...|++.++.... .....+++..|.+.|..++.+.-+.. .+.+.+.......+.
T Consensus 22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~------------------------~~~~~l~~~~~~~~~ 77 (209)
T d2fr1a2 22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR------------------------CGRDELAERLRSVGE 77 (209)
T ss_dssp CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT------------------------CCHHHHHHHHTTSCC
T ss_pred CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc------------------------cCHHHHHHHhhccCC
Confidence 3456666665432 34777888899999988876654432 234445555555677
Q ss_pred CcEEEEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEecCCccccccccccCccCccc
Q 017757 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQCWTIKNTNMKGINE 191 (366)
Q Consensus 112 id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~ 191 (366)
++.||+..+......-.. + .....+...+.++|.+. +... ..++.+++..+...
T Consensus 78 ~~~vv~l~~~~~~~~~~~-~------~~~~~~~~~l~l~qal~----~~~~--~~~l~~vT~~a~~~------------- 131 (209)
T d2fr1a2 78 VAGVLSLLAVDEAEPEEA-P------LALASLADTLSLVQAMV----SAEL--GCPLWTVTESAVAT------------- 131 (209)
T ss_dssp CSEEEECTTTTCCCCSSC-G------GGCHHHHHHHHHHHHHH----HTTC--CCCEEEEEESCSCS-------------
T ss_pred CCeEEEeCCCCCCCCcch-h------HHHHHHHHHHHHHHHHH----hCCC--CCcEEEEEcCCccc-------------
Confidence 899999876543322111 0 11122445555666653 2221 34566666533211
Q ss_pred cccccccCCCCCCccccccccccccccccccchhhhhHHHHHHHHHHHHhHhccCCcEEEEEcC
Q 017757 192 NKLCESSGKGHGGYHVTSWRELSGQFCLLGTLLWIASKFGLRGLAEALQQEVIADDIHVSLIFP 255 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~Vn~V~P 255 (366)
.+.-. .-....+++.+|+|+++.|+-...++...+.+
T Consensus 132 ----------~~~d~-----------------~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~~ 168 (209)
T d2fr1a2 132 ----------GPFER-----------------VRNAAHGALWGVGRVIALENPAVWGGLVDVPA 168 (209)
T ss_dssp ----------STTSC-----------------CSCGGGHHHHHHHHHHHHHCGGGEEEEEEECT
T ss_pred ----------CCCcc-----------------cCCHhHHhHHHHHHHHHHhCCCceEEEEECCC
Confidence 11111 22357889999999999998554444455533
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=90.35 E-value=0.16 Score=37.48 Aligned_cols=34 Identities=35% Similarity=0.541 Sum_probs=30.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
.|.++|.|| |-+|.++|..|++.|.+|.++.+.+
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence 367888884 9999999999999999999998864
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.24 E-value=0.19 Score=38.13 Aligned_cols=36 Identities=31% Similarity=0.536 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
++|+++|.|| |-+|.++|..|++.|.+|.++.+...
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence 4688999985 99999999999999999999988653
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=90.22 E-value=0.99 Score=35.81 Aligned_cols=76 Identities=21% Similarity=0.261 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
+|.++|=.|+++| .++..+++.+.+|+.++.+++.++.+.+.+.+.. ..++.++++|. .+.......+|.
T Consensus 33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda------~~~~~~~~~~D~ 103 (186)
T d1l3ia_ 33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA------PEALCKIPDIDI 103 (186)
T ss_dssp TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH------HHHHTTSCCEEE
T ss_pred CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECch------hhcccccCCcCE
Confidence 5788998887766 3344566778899999999999998888877653 25888998874 333444568899
Q ss_pred EEEcCC
Q 017757 115 LVVNQG 120 (366)
Q Consensus 115 vi~nAG 120 (366)
++.+.+
T Consensus 104 v~~~~~ 109 (186)
T d1l3ia_ 104 AVVGGS 109 (186)
T ss_dssp EEESCC
T ss_pred EEEeCc
Confidence 998754
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=90.18 E-value=0.26 Score=38.19 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=30.0
Q ss_pred CCEEEEE-cCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 37 DRHVFIT-GGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 37 gk~vLIT-Gas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
++.++|. .+++.||.++|..|+++|.+|+++.+...-
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~ 76 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA 76 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 4455554 466899999999999999999999987643
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=90.00 E-value=0.3 Score=38.50 Aligned_cols=41 Identities=27% Similarity=0.219 Sum_probs=37.3
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchh
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKK 73 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~ 73 (366)
..-+.||+++|.|= |.+|+.+|+++...|++|+++..++-+
T Consensus 18 ~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~ 58 (163)
T d1v8ba1 18 DFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC 58 (163)
T ss_dssp CCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred CceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence 56789999999995 899999999999999999999998854
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.96 E-value=0.26 Score=39.12 Aligned_cols=118 Identities=14% Similarity=0.034 Sum_probs=62.0
Q ss_pred EEEEEcC-CChhHHHHHHHHHHCC----CeEEEEecCchh--HHHHHHHH---HhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 39 HVFITGG-SSGIGLALAHQAAKEG----ARVSILARSGKK--LEEAKQSI---QLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 39 ~vLITGa-s~gIG~aia~~L~~~G----~~V~l~~r~~~~--~~~~~~~l---~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
++.|.|| +.|.+.+++..+.... .++++.|.+++. ++...... ....+..+.. ...+|. .+.+
T Consensus 3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~--~~~td~---~~al-- 75 (169)
T d1s6ya1 3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI--HLTLDR---RRAL-- 75 (169)
T ss_dssp EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE--EEESCH---HHHH--
T ss_pred EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee--eecCCc---hhhc--
Confidence 3566775 5577777777666542 489999998754 32221111 1111222221 122333 2222
Q ss_pred cCCCcEEEEcCCCCCCCCccCCCHHHHHH--HHHH----------------HHHHHHHHHHHHHHHHHhccCCCCcEEEE
Q 017757 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRL--MIDV----------------NITGSFHMIKAALPLIKKRQNGGPASIAL 170 (366)
Q Consensus 109 ~~~id~vi~nAG~~~~~~~~~~~~~~~~~--~~~v----------------N~~~~~~l~~~~~~~l~~~~~~~~g~iv~ 170 (366)
..-|++|+.||.... +.+.+ .+.. ...-...+++.+.+.+.+... .+-+++
T Consensus 76 -~gaDvVv~ta~~~~~--------~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~p--da~~i~ 144 (169)
T d1s6ya1 76 -DGADFVTTQFRVGGL--------EARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCP--DAWLIN 144 (169)
T ss_dssp -TTCSEEEECCCTTHH--------HHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCT--TCEEEE
T ss_pred -CCCCEEEEccccCCC--------CCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCC--CeEEEE
Confidence 367999999997521 11111 1111 123455667777777777652 456666
Q ss_pred ecCC
Q 017757 171 MSSQ 174 (366)
Q Consensus 171 vsS~ 174 (366)
+|--
T Consensus 145 vtNP 148 (169)
T d1s6ya1 145 FTNP 148 (169)
T ss_dssp CSSS
T ss_pred eCCh
Confidence 6653
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.83 E-value=0.65 Score=34.41 Aligned_cols=32 Identities=28% Similarity=0.364 Sum_probs=29.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 017757 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARS 70 (366)
Q Consensus 38 k~vLITGas~gIG~aia~~L~~~G~~V~l~~r~ 70 (366)
+.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 56888885 999999999999999999999886
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=89.57 E-value=0.26 Score=39.23 Aligned_cols=119 Identities=11% Similarity=0.078 Sum_probs=66.5
Q ss_pred EEEEEcCCChhHH--HHHHHHHHC----CCeEEEEecCchhHHHHHHHHHh---hcCCeEEEEEecCCCHHHHHHHHHhc
Q 017757 39 HVFITGGSSGIGL--ALAHQAAKE----GARVSILARSGKKLEEAKQSIQL---ATGIEVATYSADVRDFDAVKTALDEA 109 (366)
Q Consensus 39 ~vLITGas~gIG~--aia~~L~~~----G~~V~l~~r~~~~~~~~~~~l~~---~~~~~v~~~~~Dls~~~~v~~~~~~~ 109 (366)
++.|.|| |.+|. ++...++.. +.+++++|+++++++.....+.. ..+........ +| .++.++
T Consensus 4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL~-- 75 (171)
T d1obba1 4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVII-- 75 (171)
T ss_dssp EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHHT--
T ss_pred EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhccc--
Confidence 5677786 54454 455556653 45899999999887765444433 22323322221 22 233333
Q ss_pred CCCcEEEEcCCCCCCCCccCCCHHHHHHHHHHH------------------------HHHHHHHHHHHHHHHHhccCCCC
Q 017757 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVN------------------------ITGSFHMIKAALPLIKKRQNGGP 165 (366)
Q Consensus 110 ~~id~vi~nAG~~~~~~~~~~~~~~~~~~~~vN------------------------~~~~~~l~~~~~~~l~~~~~~~~ 165 (366)
..|++|+.++... .+.+++...+. ..-..-+++.+.+.+++... .
T Consensus 76 -dad~Vv~~~~~g~--------~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p--~ 144 (171)
T d1obba1 76 -DADFVINTAMVGG--------HTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSP--K 144 (171)
T ss_dssp -TCSEEEECCCTTH--------HHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCT--T
T ss_pred -CCCeEeeeccccc--------ccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCc--C
Confidence 7899999988642 22222111111 12366677788888777652 4
Q ss_pred cEEEEecCCcc
Q 017757 166 ASIALMSSQAG 176 (366)
Q Consensus 166 g~iv~vsS~~~ 176 (366)
..++++|--..
T Consensus 145 a~~i~~TNPvd 155 (171)
T d1obba1 145 AWYLQAANPIF 155 (171)
T ss_dssp CEEEECSSCHH
T ss_pred eEEEEECChHH
Confidence 56777766433
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=89.42 E-value=0.16 Score=38.04 Aligned_cols=35 Identities=17% Similarity=0.392 Sum_probs=31.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
.|.++|.|| |-||.++|..|.+.|.+|.++.|++.
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence 478899995 99999999999999999999998764
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=89.28 E-value=0.16 Score=42.98 Aligned_cols=31 Identities=29% Similarity=0.402 Sum_probs=28.3
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
|+|+|| |-.|.++|.+|+++|.+|++++++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 788885 8999999999999999999999864
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=88.97 E-value=0.84 Score=36.48 Aligned_cols=77 Identities=12% Similarity=0.114 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
++++.+|=.|++.| + .+..|+++|++|+.++.++..++.+.+......-..+.+...|+.+.. . -+..|.
T Consensus 29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~--~~~fD~ 98 (198)
T d2i6ga1 29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----F--DGEYDF 98 (198)
T ss_dssp SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----C--CCCEEE
T ss_pred CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----c--cccccE
Confidence 45668999998655 3 567888999999999999988887776666543346788888876533 0 146799
Q ss_pred EEEcCCC
Q 017757 115 LVVNQGV 121 (366)
Q Consensus 115 vi~nAG~ 121 (366)
++.+.-.
T Consensus 99 I~~~~~~ 105 (198)
T d2i6ga1 99 ILSTVVM 105 (198)
T ss_dssp EEEESCG
T ss_pred EEEeeee
Confidence 8876643
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=88.94 E-value=0.51 Score=39.12 Aligned_cols=74 Identities=16% Similarity=0.157 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+++++|=.|++.| .++..|+++|++|+.++.++.-++.+.+..... +.++.+...|+.+.+ --+..|.+
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~-~~~i~~~~~d~~~l~-------~~~~fD~I 109 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER-NLKIEFLQGDVLEIA-------FKNEFDAV 109 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCCEEEESCGGGCC-------CCSCEEEE
T ss_pred CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc-cccchheehhhhhcc-------cccccchH
Confidence 5678999998877 446678899999999999998877777766543 557889999976632 11468988
Q ss_pred EEcCC
Q 017757 116 VVNQG 120 (366)
Q Consensus 116 i~nAG 120 (366)
++.-+
T Consensus 110 ~~~~~ 114 (251)
T d1wzna1 110 TMFFS 114 (251)
T ss_dssp EECSS
T ss_pred hhhhh
Confidence 87543
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.79 E-value=0.73 Score=38.09 Aligned_cols=81 Identities=16% Similarity=0.142 Sum_probs=62.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-----CCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-----GIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-----~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
+|.+||-.|+++|--.++..++.....+|+.++++++-++.+.+.+.... ..++.+...|..+ .....+
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~------~~~~~~ 149 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM------GYAEEA 149 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG------CCGGGC
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccc------ccchhh
Confidence 47899999999998888888888888899999999988888777765432 2467777777642 112235
Q ss_pred CCcEEEEcCCCC
Q 017757 111 PVDVLVVNQGVF 122 (366)
Q Consensus 111 ~id~vi~nAG~~ 122 (366)
++|.++.+++..
T Consensus 150 ~fD~I~~~~~~~ 161 (224)
T d1i1na_ 150 PYDAIHVGAAAP 161 (224)
T ss_dssp CEEEEEECSBBS
T ss_pred hhhhhhhhcchh
Confidence 789999998754
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=88.73 E-value=0.23 Score=43.51 Aligned_cols=36 Identities=25% Similarity=0.476 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
++|.++|.|| |--|..+|..|+++|.+|+++.++..
T Consensus 1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 5789999995 77899999999999999999988753
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=88.70 E-value=0.27 Score=41.00 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
..++|+|+|| |--|..+|..|+++|.+|+++.|+++
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 5678999996 77799999999999999999998754
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=88.62 E-value=0.64 Score=37.91 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=71.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEEE
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~vi 116 (366)
+++||=.|++.|.- +..++++|++|+.++.+++-++.+.+.+......++.++..|..+.. + ..+..|+++
T Consensus 16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~-~~~~fD~v~ 86 (231)
T d1vl5a_ 16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F-TDERFHIVT 86 (231)
T ss_dssp CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S-CTTCEEEEE
T ss_pred cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----c-ccccccccc
Confidence 57899999887743 46678889999999999988887777666655567899999887632 0 124789999
Q ss_pred EcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEe
Q 017757 117 VNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALM 171 (366)
Q Consensus 117 ~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~v 171 (366)
.+..+.+.. +++ .+++.+.+.|++ .|++++.
T Consensus 87 ~~~~l~~~~-----d~~--------------~~l~~~~r~Lkp-----gG~l~i~ 117 (231)
T d1vl5a_ 87 CRIAAHHFP-----NPA--------------SFVSEAYRVLKK-----GGQLLLV 117 (231)
T ss_dssp EESCGGGCS-----CHH--------------HHHHHHHHHEEE-----EEEEEEE
T ss_pred ccccccccC-----CHH--------------HHHHHHHHhcCC-----CcEEEEE
Confidence 887654321 222 345666777765 5677764
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.43 E-value=0.29 Score=40.52 Aligned_cols=78 Identities=15% Similarity=0.150 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh-----------------cCCeEEEEEecCCC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA-----------------TGIEVATYSADVRD 98 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~-----------------~~~~v~~~~~Dls~ 98 (366)
.+.+||..|++.| ..+..|+++|++|+.++-++..++.+.++.... .+.++.++.+|+.+
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 121 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD 121 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence 6789999998877 568889999999999999998887776654321 13467788888654
Q ss_pred HHHHHHHHHhcCCCcEEEEcCCC
Q 017757 99 FDAVKTALDEAGPVDVLVVNQGV 121 (366)
Q Consensus 99 ~~~v~~~~~~~~~id~vi~nAG~ 121 (366)
... ...+..|+++...-.
T Consensus 122 l~~-----~~~~~fd~i~~~~~l 139 (229)
T d2bzga1 122 LPR-----TNIGKFDMIWDRGAL 139 (229)
T ss_dssp GGG-----SCCCCEEEEEESSST
T ss_pred ccc-----cccCceeEEEEEEEE
Confidence 221 112456777665544
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=88.02 E-value=0.28 Score=38.15 Aligned_cols=35 Identities=20% Similarity=0.312 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC--eEEEEecCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSG 71 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~--~V~l~~r~~ 71 (366)
.||+++|.|| |-.|..+|..|.+.+. +|+++++++
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4899999996 7889999999999885 688887765
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.82 E-value=0.79 Score=39.56 Aligned_cols=24 Identities=25% Similarity=0.181 Sum_probs=21.5
Q ss_pred ChhHHHHHHHHHHCCCeEEEEecC
Q 017757 47 SGIGLALAHQAAKEGARVSILARS 70 (366)
Q Consensus 47 ~gIG~aia~~L~~~G~~V~l~~r~ 70 (366)
|..|.++|+.+..+|++|+++.+.
T Consensus 46 Gk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 46 GRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred hHHHHHHHHHHHHcCCEEEEEecC
Confidence 479999999999999999998654
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=87.69 E-value=0.31 Score=36.54 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=30.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
.+.++|.|| |-||.++|..|++.|.+|.++.+.+
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence 578999995 9999999999999999999998864
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=87.35 E-value=0.36 Score=37.23 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=30.2
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHH
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEA 77 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~ 77 (366)
+-|.| .|-+|.++|+.|+++|++|+..+++..+....
T Consensus 3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~ 39 (152)
T d1i36a2 3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE 39 (152)
T ss_dssp EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence 45665 69999999999999999999998877655433
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=87.14 E-value=0.26 Score=42.12 Aligned_cols=35 Identities=34% Similarity=0.467 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
+.|.|+|+|| |--|...|.+|+++|++|+++.++.
T Consensus 29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5578999996 6779999999999999999998865
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=86.33 E-value=1.6 Score=34.66 Aligned_cols=81 Identities=15% Similarity=0.242 Sum_probs=56.4
Q ss_pred CCCCCEEE-EEcCCChhHHHHHHHHHHCCCe-EEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHhcC
Q 017757 34 PIKDRHVF-ITGGSSGIGLALAHQAAKEGAR-VSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAG 110 (366)
Q Consensus 34 ~l~gk~vL-ITGas~gIG~aia~~L~~~G~~-V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~ 110 (366)
.++|+++| +..|+|.+|.+ .+++|++ |+.++.+....+.+.+.++... ..++..+..|+.+ .++.+.++-.
T Consensus 39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~--~l~~~~~~~~ 112 (182)
T d2fhpa1 39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR--ALEQFYEEKL 112 (182)
T ss_dssp CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH--HHHHHHHTTC
T ss_pred hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh--hhhhhcccCC
Confidence 46788888 55567778875 4457874 9999999988887777765543 2367788877643 3444444445
Q ss_pred CCcEEEEcCC
Q 017757 111 PVDVLVVNQG 120 (366)
Q Consensus 111 ~id~vi~nAG 120 (366)
+.|+++...-
T Consensus 113 ~fDlIflDPP 122 (182)
T d2fhpa1 113 QFDLVLLDPP 122 (182)
T ss_dssp CEEEEEECCC
T ss_pred CcceEEechh
Confidence 7899998774
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=86.20 E-value=3.1 Score=31.59 Aligned_cols=77 Identities=14% Similarity=0.231 Sum_probs=53.1
Q ss_pred CCCCCEEEEEcC-CChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHh-c
Q 017757 34 PIKDRHVFITGG-SSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE-A 109 (366)
Q Consensus 34 ~l~gk~vLITGa-s~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~-~ 109 (366)
.++|+.+|=.|+ +|.+|.+ .+.+|+ +|+.++.+++..+.+.+.++... ..++..++.|..+ +++. .
T Consensus 12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~~~~ 81 (152)
T d2esra1 12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AIDCLT 81 (152)
T ss_dssp CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHHHBC
T ss_pred hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cccccc
Confidence 478999996654 4556654 456776 69999999988877776665442 2468888888533 3333 3
Q ss_pred CCCcEEEEcCC
Q 017757 110 GPVDVLVVNQG 120 (366)
Q Consensus 110 ~~id~vi~nAG 120 (366)
++.|+++.++.
T Consensus 82 ~~fDiIf~DPP 92 (152)
T d2esra1 82 GRFDLVFLDPP 92 (152)
T ss_dssp SCEEEEEECCS
T ss_pred cccceeEechh
Confidence 57899988764
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.07 E-value=1.1 Score=38.95 Aligned_cols=75 Identities=25% Similarity=0.298 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHh-hcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQL-ATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 35 l~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
.+||+||-.|++.|+ ++..+++.|+ +|+.++.++. ...+.+.... ....++.++..|..+.+ ....++
T Consensus 32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~------~~~~~~ 101 (316)
T d1oria_ 32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE------LPVEKV 101 (316)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC------CSSSCE
T ss_pred CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc------ccccee
Confidence 589999999988875 5567778886 5999998754 4444443333 22456889998887632 112478
Q ss_pred cEEEEcC
Q 017757 113 DVLVVNQ 119 (366)
Q Consensus 113 d~vi~nA 119 (366)
|+++..-
T Consensus 102 D~ivs~~ 108 (316)
T d1oria_ 102 DIIISEW 108 (316)
T ss_dssp EEEEECC
T ss_pred EEEeeee
Confidence 9888753
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=85.88 E-value=0.98 Score=37.36 Aligned_cols=75 Identities=20% Similarity=0.094 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|.++|-.|+++|--.+ .|++.+.+|+.++++++..+.+.+.+.. ..++.++..|...- ..+.+++|.+
T Consensus 70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~--~~nv~~~~~d~~~g------~~~~~pfD~I 138 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY--YNNIKLILGDGTLG------YEEEKPYDRV 138 (224)
T ss_dssp TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT--CSSEEEEESCGGGC------CGGGCCEEEE
T ss_pred ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc--ccccccccCchhhc------chhhhhHHHH
Confidence 47789999988885443 4555678999999998877766554442 35788888887541 1224578999
Q ss_pred EEcCCC
Q 017757 116 VVNQGV 121 (366)
Q Consensus 116 i~nAG~ 121 (366)
+.+++.
T Consensus 139 iv~~a~ 144 (224)
T d1vbfa_ 139 VVWATA 144 (224)
T ss_dssp EESSBB
T ss_pred Hhhcch
Confidence 988875
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=85.49 E-value=3 Score=36.05 Aligned_cols=81 Identities=20% Similarity=0.208 Sum_probs=56.3
Q ss_pred CCCEEEEE-cCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhh--cCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 36 KDRHVFIT-GGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLA--TGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 36 ~gk~vLIT-Gas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++++||=. .++|+++.++ ++.|++|+.++.++..++.+.+..... ...++.++..|+.+ -+++..++-.++
T Consensus 132 ~~~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~--~l~~~~~~~~~f 205 (309)
T d2igta1 132 RPLKVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK--FIQREERRGSTY 205 (309)
T ss_dssp SCCEEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH--HHHHHHHHTCCB
T ss_pred CCCeEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH--hHHHHhhcCCCC
Confidence 57788844 4556655554 457999999999999888877765443 23468888887643 344555555689
Q ss_pred cEEEEcCCCC
Q 017757 113 DVLVVNQGVF 122 (366)
Q Consensus 113 d~vi~nAG~~ 122 (366)
|+||.+.-..
T Consensus 206 D~IilDPP~f 215 (309)
T d2igta1 206 DIILTDPPKF 215 (309)
T ss_dssp SEEEECCCSE
T ss_pred CEEEECCCcc
Confidence 9999987544
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=85.14 E-value=0.38 Score=40.65 Aligned_cols=31 Identities=26% Similarity=0.473 Sum_probs=27.6
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
++|.|| |-.|..+|.+|+++|.+|+++++..
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 788885 8889999999999999999998853
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.12 E-value=0.4 Score=38.72 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=27.8
Q ss_pred EEEEcCCChhHHHHHHHHHHCCCeEEEEecCc
Q 017757 40 VFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (366)
Q Consensus 40 vLITGas~gIG~aia~~L~~~G~~V~l~~r~~ 71 (366)
|+|.| +|--|..+|..|+++|.+|+++.++.
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 78888 47779999999999999999999874
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=85.10 E-value=0.38 Score=41.23 Aligned_cols=32 Identities=22% Similarity=0.430 Sum_probs=27.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCc
Q 017757 39 HVFITGGSSGIGLALAHQAAKEGA-RVSILARSG 71 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~ 71 (366)
.|+|.|| |-+|.++|.+|+++|. +|++++|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 4788885 7999999999999996 599998864
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=85.05 E-value=2.7 Score=35.56 Aligned_cols=79 Identities=18% Similarity=0.173 Sum_probs=52.5
Q ss_pred CEEEEEcCCCh-hHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 38 RHVFITGGSSG-IGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 38 k~vLITGas~g-IG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
++++-.|+++| |+.+++ + ...++|++++.+++.++-+.+...... ..++.....|+.+. ..+..+++|++
T Consensus 112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~-----~~~~~~~fDlI 183 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-----FKEKFASIEMI 183 (271)
T ss_dssp CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-----GGGGTTTCCEE
T ss_pred cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc-----cccccCcccEE
Confidence 45565555555 555544 2 357899999999998887777665432 34677778887643 22334689999
Q ss_pred EEcCCCCCC
Q 017757 116 VVNQGVFVP 124 (366)
Q Consensus 116 i~nAG~~~~ 124 (366)
|.|.-+...
T Consensus 184 VsNPPYI~~ 192 (271)
T d1nv8a_ 184 LSNPPYVKS 192 (271)
T ss_dssp EECCCCBCG
T ss_pred EEcccccCc
Confidence 999886543
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=84.92 E-value=1.6 Score=37.20 Aligned_cols=79 Identities=16% Similarity=0.152 Sum_probs=56.2
Q ss_pred CCEEEEEc-CCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 37 DRHVFITG-GSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 37 gk~vLITG-as~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
+..+|=.| |||-||.++++.+ ...+|+.++.++..++-+.+..+...-.++.+++.|+.+.- .-.++|++
T Consensus 109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~-------~~~~fDlI 179 (274)
T d2b3ta1 109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL-------AGQQFAMI 179 (274)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG-------TTCCEEEE
T ss_pred ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc-------CCCceeEE
Confidence 34566556 5566777776654 46799999999998888777766553346999999976531 11479999
Q ss_pred EEcCCCCCC
Q 017757 116 VVNQGVFVP 124 (366)
Q Consensus 116 i~nAG~~~~ 124 (366)
|.|.-+...
T Consensus 180 vsNPPYi~~ 188 (274)
T d2b3ta1 180 VSNPPYIDE 188 (274)
T ss_dssp EECCCCBCT
T ss_pred Eecchhhhh
Confidence 999876543
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=84.89 E-value=0.33 Score=35.17 Aligned_cols=40 Identities=13% Similarity=0.104 Sum_probs=33.2
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCch
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGK 72 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~ 72 (366)
..+++||+|+|.|+ |--|..+|..|++.+.+++...|...
T Consensus 27 ~~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 27 PELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GGGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hhhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 45789999999996 57799999999999988877777543
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=84.80 E-value=0.43 Score=37.42 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecC
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARS 70 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~ 70 (366)
+++.++|.|| |.+|.++|..|.+.|.++.++.+.
T Consensus 2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEec
Confidence 4778999985 899999999999999886555443
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=84.71 E-value=0.7 Score=39.92 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=32.8
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEec
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR 69 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r 69 (366)
..+++||+++|-| .|-+|..+|+.|.+.|++|+.++-
T Consensus 31 ~~~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 31 TPGFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp CSSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence 4579999999999 489999999999999999887753
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=84.58 E-value=0.44 Score=39.92 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=30.5
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHH-CCCeEEEEe
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAK-EGARVSILA 68 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~-~G~~V~l~~ 68 (366)
.+++|++++|-| .|-+|..+|+.|.+ .|++|+.++
T Consensus 27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 478999999998 79999999999986 599988765
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=84.03 E-value=0.54 Score=39.89 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=32.4
Q ss_pred CcCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe
Q 017757 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA 68 (366)
Q Consensus 32 ~~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~ 68 (366)
..+++||+++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus 31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 4689999999999 69999999999999999988664
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=84.03 E-value=0.62 Score=39.13 Aligned_cols=35 Identities=29% Similarity=0.270 Sum_probs=31.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEe
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA 68 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~ 68 (366)
.+++||+++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus 27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence 379999999998 79999999999999999988665
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=83.93 E-value=1.1 Score=31.81 Aligned_cols=72 Identities=18% Similarity=0.219 Sum_probs=45.5
Q ss_pred CCCEEEEEcCCChhH-HHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcE
Q 017757 36 KDRHVFITGGSSGIG-LALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (366)
Q Consensus 36 ~gk~vLITGas~gIG-~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~ 114 (366)
+.|.+.+.|- +|+| .++|+.|.++|++|...|+...... +.+.+. +..+. ..+- ++ .....|.
T Consensus 7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~-Gi~v~--~g~~--~~-------~i~~~d~ 70 (96)
T d1p3da1 7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQA-GAKIY--IGHA--EE-------HIEGASV 70 (96)
T ss_dssp TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHT-TCEEE--ESCC--GG-------GGTTCSE
T ss_pred hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHC-CCeEE--ECCc--cc-------cCCCCCE
Confidence 5677888884 5556 5679999999999999999754322 223322 43332 2111 11 1236899
Q ss_pred EEEcCCCCC
Q 017757 115 LVVNQGVFV 123 (366)
Q Consensus 115 vi~nAG~~~ 123 (366)
+|...++..
T Consensus 71 vV~S~AI~~ 79 (96)
T d1p3da1 71 VVVSSAIKD 79 (96)
T ss_dssp EEECTTSCT
T ss_pred EEECCCcCC
Confidence 999988753
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=83.82 E-value=0.35 Score=37.16 Aligned_cols=77 Identities=17% Similarity=0.052 Sum_probs=48.0
Q ss_pred EEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcC--------CeEEEEEecCCCHHHHHHHHHhcC-CC
Q 017757 42 ITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATG--------IEVATYSADVRDFDAVKTALDEAG-PV 112 (366)
Q Consensus 42 ITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--------~~v~~~~~Dls~~~~v~~~~~~~~-~i 112 (366)
+.| +|-+|+++++.|.+.+..+.+.+|+.++++++.++...... .++.++. +. ++++.++.+++. +=
T Consensus 4 fIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~--v~-d~~i~~v~~~l~~~~ 79 (153)
T d2i76a2 4 FVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVI--VP-DRYIKTVANHLNLGD 79 (153)
T ss_dssp EES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEEC--SC-TTTHHHHHTTTCCSS
T ss_pred EEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEe--cc-chhhhHHHhhhcccc
Confidence 445 68899999998866544456899999999888777643221 1233322 32 356777877764 33
Q ss_pred cEEEEcCCCC
Q 017757 113 DVLVVNQGVF 122 (366)
Q Consensus 113 d~vi~nAG~~ 122 (366)
.+++|+++..
T Consensus 80 ~ivi~~s~~~ 89 (153)
T d2i76a2 80 AVLVHCSGFL 89 (153)
T ss_dssp CCEEECCSSS
T ss_pred eeeeecccch
Confidence 5778888754
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=83.76 E-value=0.69 Score=39.84 Aligned_cols=32 Identities=28% Similarity=0.563 Sum_probs=24.1
Q ss_pred CEEEEEcCCChhHH-----HHHHHHHHCCCeEEEEecC
Q 017757 38 RHVFITGGSSGIGL-----ALAHQAAKEGARVSILARS 70 (366)
Q Consensus 38 k~vLITGas~gIG~-----aia~~L~~~G~~V~l~~r~ 70 (366)
|+++|++|+.| |. +++++|.++|++|..++..
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 56677665545 66 6889999999999877654
|
| >d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine synthase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.76 E-value=1.8 Score=40.17 Aligned_cols=71 Identities=17% Similarity=0.172 Sum_probs=48.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHh
Q 017757 37 DRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE 108 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~ 108 (366)
.+..++++.||.-|.|.+..+... +.+|++..-...--+-...++....+.+|+.+.+| .+.|+++.++++
T Consensus 151 ~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~-G~fDDcq~~vk~ 222 (511)
T d1kl7a_ 151 KQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT-GTFDNCQDIVKA 222 (511)
T ss_dssp CCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES-SCHHHHHHHHHH
T ss_pred ceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEec-cChHHHHHHHHH
Confidence 344555566678999999999854 67788776654322222233444446789989988 688999888887
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=83.74 E-value=0.46 Score=40.25 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCChhHHHH-----HHHHHHCCCeEEEEecCch
Q 017757 36 KDRHVFITGGSSGIGLAL-----AHQAAKEGARVSILARSGK 72 (366)
Q Consensus 36 ~gk~vLITGas~gIG~ai-----a~~L~~~G~~V~l~~r~~~ 72 (366)
.++.++|+.|-||.|+.+ |..|+++|.+|.+++-+++
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 577788887799999986 7999999999999999975
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=82.40 E-value=1.5 Score=36.46 Aligned_cols=78 Identities=13% Similarity=0.099 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC-eEEEEecCchhHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHHhcCCCc
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGKKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~id 113 (366)
+|++||=.|++.| ..+..+++.|. +|+.+|.+++.++.+.+...... ..++.+.++|..... ...-+..|
T Consensus 24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~-----~~~~~~fD 95 (252)
T d1ri5a_ 24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH-----MDLGKEFD 95 (252)
T ss_dssp TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC-----CCCSSCEE
T ss_pred CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhc-----ccccccce
Confidence 5789999998766 23456667675 79999999998888877665432 347899999975421 11124689
Q ss_pred EEEEcCCC
Q 017757 114 VLVVNQGV 121 (366)
Q Consensus 114 ~vi~nAG~ 121 (366)
+|+++-+.
T Consensus 96 ~V~~~~~l 103 (252)
T d1ri5a_ 96 VISSQFSF 103 (252)
T ss_dssp EEEEESCG
T ss_pred EEEEccee
Confidence 98887654
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.36 E-value=3.2 Score=34.46 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=29.8
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHHHHC-CCeEEEEe
Q 017757 33 IPIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILA 68 (366)
Q Consensus 33 ~~l~gk~vLITGas~gIG~aia~~L~~~-G~~V~l~~ 68 (366)
.+++||+++|-|- |-+|..+|+.|+++ |++|+.++
T Consensus 28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs 63 (239)
T d1gtma1 28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS 63 (239)
T ss_dssp SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence 4699999999995 77999999999875 88887664
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=82.36 E-value=2 Score=34.95 Aligned_cols=103 Identities=11% Similarity=0.068 Sum_probs=70.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCCcEE
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~id~v 115 (366)
.|.+||=.|++.|. ++..|++++.+|+.++.++.-++.+.+......-.++.+++.|..+.. + ..+.+|.+
T Consensus 16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~----~--~~~~fD~v 86 (234)
T d1xxla_ 16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP----F--PDDSFDII 86 (234)
T ss_dssp TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC----S--CTTCEEEE
T ss_pred CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc----c--ccccccee
Confidence 36789999988874 455677789999999999988887777666554457889999976532 0 12478988
Q ss_pred EEcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEEe
Q 017757 116 VVNQGVFVPGELEVQSLDEVRLMIDVNITGSFHMIKAALPLIKKRQNGGPASIALM 171 (366)
Q Consensus 116 i~nAG~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~l~~~~~~~~g~iv~v 171 (366)
+.+-...... ++ ..+++.+.+.+++ .|++++.
T Consensus 87 ~~~~~l~~~~-----d~--------------~~~l~~~~r~Lkp-----gG~~~~~ 118 (234)
T d1xxla_ 87 TCRYAAHHFS-----DV--------------RKAVREVARVLKQ-----DGRFLLV 118 (234)
T ss_dssp EEESCGGGCS-----CH--------------HHHHHHHHHHEEE-----EEEEEEE
T ss_pred eeeceeeccc-----CH--------------HHHHHHHHHeeCC-----CcEEEEE
Confidence 8775543221 22 2456677777766 4676664
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.25 E-value=5.4 Score=29.93 Aligned_cols=85 Identities=8% Similarity=0.023 Sum_probs=50.8
Q ss_pred CCCEEEEEcCC---ChhHHHHHHHHHHCCCeEEEEecCchhHH--HHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhc-
Q 017757 36 KDRHVFITGGS---SGIGLALAHQAAKEGARVSILARSGKKLE--EAKQSIQLATGIEVATYSADVRDFDAVKTALDEA- 109 (366)
Q Consensus 36 ~gk~vLITGas---~gIG~aia~~L~~~G~~V~l~~r~~~~~~--~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~- 109 (366)
+-|.+.|.|+| +..|..+++.|.+.|++|+.+....+... .....+... ...+..+. =...++.+.+++++.
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dl-p~~iD~v~-i~vp~~~~~~~~~e~~ 95 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDI-PDKIEVVD-LFVKPKLTMEYVEQAI 95 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGC-SSCCSEEE-ECSCHHHHHHHHHHHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCccccccccc-CccceEEE-EEeCHHHHHHHHHHHH
Confidence 57899999999 57999999999999999998866543211 000111111 11111111 123455566666553
Q ss_pred -CCCcEEEEcCCCC
Q 017757 110 -GPVDVLVVNQGVF 122 (366)
Q Consensus 110 -~~id~vi~nAG~~ 122 (366)
.++..++...|..
T Consensus 96 ~~g~k~v~~~~G~~ 109 (139)
T d2d59a1 96 KKGAKVVWFQYNTY 109 (139)
T ss_dssp HHTCSEEEECTTCC
T ss_pred HhCCCEEEEecccc
Confidence 2467788777753
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=81.65 E-value=2.2 Score=31.82 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCCC----------hhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHH
Q 017757 35 IKDRHVFITGGSS----------GIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKT 104 (366)
Q Consensus 35 l~gk~vLITGas~----------gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~ 104 (366)
-+-|.+||.|++. --+.+.+++|.+.|++++++.-|++....-- ....++.+ +--..+++.+
T Consensus 5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~-----d~aD~lYf---ePlt~e~v~~ 76 (127)
T d1a9xa3 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP-----EMADATYI---EPIHWEVVRK 76 (127)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG-----GGSSEEEC---SCCCHHHHHH
T ss_pred CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh-----hhcceeee---ecCCHHHHHH
Confidence 3568899999754 4567889999999999999999987543210 01234433 3345788888
Q ss_pred HHHhcCCCcEEEEcCCC
Q 017757 105 ALDEAGPVDVLVVNQGV 121 (366)
Q Consensus 105 ~~~~~~~id~vi~nAG~ 121 (366)
++++- ++|.++-..|.
T Consensus 77 Ii~~E-~pd~il~~~GG 92 (127)
T d1a9xa3 77 IIEKE-RPDAVLPTMGG 92 (127)
T ss_dssp HHHHH-CCSEEECSSSH
T ss_pred HHHHh-CcCCeEEEeee
Confidence 88775 68888877663
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=80.70 E-value=2.5 Score=30.62 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=27.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH---CCCeEEEEecCch
Q 017757 37 DRHVFITGGSSGIGLALAHQAAK---EGARVSILARSGK 72 (366)
Q Consensus 37 gk~vLITGas~gIG~aia~~L~~---~G~~V~l~~r~~~ 72 (366)
.+.++|.|| |.+|.++|..|.+ +|.+|.++.|.+.
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 478999996 9999999976655 4567999988653
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=80.61 E-value=0.48 Score=38.14 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=27.7
Q ss_pred CEEEEEcCCChhHHH-----HHHHHHHCCCeEEEEec
Q 017757 38 RHVFITGGSSGIGLA-----LAHQAAKEGARVSILAR 69 (366)
Q Consensus 38 k~vLITGas~gIG~a-----ia~~L~~~G~~V~l~~r 69 (366)
|++.|||.++|.|+. +|+.|+++|.+|.+++-
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 789999988899975 67899999999999863
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=80.57 E-value=10 Score=28.93 Aligned_cols=75 Identities=9% Similarity=-0.013 Sum_probs=41.7
Q ss_pred EEEEEcCCChhHHHHHHH-HHH-C----CCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHhcCCC
Q 017757 39 HVFITGGSSGIGLALAHQ-AAK-E----GARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (366)
Q Consensus 39 ~vLITGas~gIG~aia~~-L~~-~----G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~i 112 (366)
++.|.||++ .|...+-. +++ . +.++++.|.++++++...+.............. - ++. .+.+ ...
T Consensus 2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~-t-~~~---~~~l---~~a 72 (162)
T d1up7a1 2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-S-DTF---EGAV---VDA 72 (162)
T ss_dssp EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE-C-SSH---HHHH---TTC
T ss_pred EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE-e-cCc---cccc---CCC
Confidence 367888754 45444422 222 1 458999999999877554433332222222111 1 222 2222 368
Q ss_pred cEEEEcCCCC
Q 017757 113 DVLVVNQGVF 122 (366)
Q Consensus 113 d~vi~nAG~~ 122 (366)
|++|..||..
T Consensus 73 DvVVita~~~ 82 (162)
T d1up7a1 73 KYVIFQFRPG 82 (162)
T ss_dssp SEEEECCCTT
T ss_pred CEEEEecccC
Confidence 9999999864
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=80.56 E-value=4 Score=31.66 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=47.1
Q ss_pred CCCEEEEEc-CCChhHHHHHHHHHHCCCeEEEEecCchhHHHHHHHHHhhcCCeEEEEEecCCCHHHHHH-HHHhcCCCc
Q 017757 36 KDRHVFITG-GSSGIGLALAHQAAKEGARVSILARSGKKLEEAKQSIQLATGIEVATYSADVRDFDAVKT-ALDEAGPVD 113 (366)
Q Consensus 36 ~gk~vLITG-as~gIG~aia~~L~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~Dls~~~~v~~-~~~~~~~id 113 (366)
+|+++|=.| |+|.+|. +++++|++|+.++.++...+.+.+.++.. +....... .+.+.... ......+.|
T Consensus 41 ~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~-~~~~~v~~---~~~d~~~~~~~~~~~~fD 112 (171)
T d1ws6a1 41 RRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRT-GLGARVVA---LPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHH-TCCCEEEC---SCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhh-ccccceee---eehhcccccccccCCccc
Confidence 677777555 4455553 56667999999999999888777766654 32222222 22332222 222235789
Q ss_pred EEEEcCC
Q 017757 114 VLVVNQG 120 (366)
Q Consensus 114 ~vi~nAG 120 (366)
+++.+.-
T Consensus 113 ~If~DPP 119 (171)
T d1ws6a1 113 VAFMAPP 119 (171)
T ss_dssp EEEECCC
T ss_pred eeEEccc
Confidence 9998864
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=80.04 E-value=2.3 Score=34.84 Aligned_cols=81 Identities=15% Similarity=0.189 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHH-CC----CeEEEEecCchhHHHHHHHHHhh-----cCCeEEEEEecCCCHHHHHHH
Q 017757 36 KDRHVFITGGSSGIGLALAHQAAK-EG----ARVSILARSGKKLEEAKQSIQLA-----TGIEVATYSADVRDFDAVKTA 105 (366)
Q Consensus 36 ~gk~vLITGas~gIG~aia~~L~~-~G----~~V~l~~r~~~~~~~~~~~l~~~-----~~~~v~~~~~Dls~~~~v~~~ 105 (366)
+|.+||..|+++|--.++..+++. .| .+|+.+.++++-.+.+.+.+... .-.++.+...|..+ .
T Consensus 80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~------~ 153 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK------G 153 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG------C
T ss_pred CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccc------c
Confidence 578999999988888777777765 34 48999999988777665554321 12478888888653 1
Q ss_pred HHhcCCCcEEEEcCCCC
Q 017757 106 LDEAGPVDVLVVNQGVF 122 (366)
Q Consensus 106 ~~~~~~id~vi~nAG~~ 122 (366)
....+++|.++.+++..
T Consensus 154 ~~~~~~fD~Iiv~~a~~ 170 (223)
T d1r18a_ 154 YPPNAPYNAIHVGAAAP 170 (223)
T ss_dssp CGGGCSEEEEEECSCBS
T ss_pred cccccceeeEEEEeech
Confidence 22346789999988754
|